View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14289_low_15 (Length: 521)
Name: NF14289_low_15
Description: NF14289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14289_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 431; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 431; E-Value: 0
Query Start/End: Original strand, 19 - 492
Target Start/End: Original strand, 36025835 - 36026308
Alignment:
| Q |
19 |
agacattgctgtctctggaacagatagctaattgcactatgttgtctagctggtgtttatttatgcttttcttagaacactttcttatttgtaatagttt |
118 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36025835 |
agacattgctgtctctggaacagatagctaattgcactatgttgtctagctggtgtttatttatgcttttcttagaacactttcttatttgtaatagttt |
36025934 |
T |
|
| Q |
119 |
tgtgtcaaatgagtttatttataatctacgagccttacacaataatttaacatgataaatacaacctcaacctaaaatctgtcctctcaagtttgatatg |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36025935 |
tgtgtcaaatgagtttatttataatctacgagccttacacaataatttaacatgataaatacaacctcaacctaaaatctgtcctctcaagtttgatatg |
36026034 |
T |
|
| Q |
219 |
tttggaggtatttgtagtattccgattcagaagaaattattatcgaatagattgagttggatctcttgtgggttcttgctttacgaaatccgacacaata |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36026035 |
tttggaggtatttgtagtattccgattcagaagaaattattatcgaatagattgagttggatctcttgtgggttcttgctttacgaaatccgacacaata |
36026134 |
T |
|
| Q |
319 |
tttttccccggttctcttattcttttattaattctcttcattcaactatggttttactgtcagttgatatttaataagaggacgttctagtactatcnnn |
418 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36026135 |
tttttccccggttctcttattcttttattaattctcttcattcaactatggtcttactgtcagttgatatttaataagaggacgttctagtactatcaaa |
36026234 |
T |
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| Q |
419 |
nnnnnnnnnntaagaggacgttccagaatatgatatttttccacaaatgcttctggtaatgtagtatggagata |
492 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36026235 |
aaaataaaaataagaggacgttccagaatatgatatttttccacaaatgcttctggtaatgtagtatggagata |
36026308 |
T |
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