View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14289_low_34 (Length: 348)
Name: NF14289_low_34
Description: NF14289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14289_low_34 |
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Alignment Details
Target: chr6 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 19 - 340
Target Start/End: Complemental strand, 14973972 - 14973651
Alignment:
| Q |
19 |
ctaccttgaattaatgaatagtcgtggtttgttcacttctgaccaagacttgttcaatgataagagaacaaagggattagtcacttcatttgccaataat |
118 |
Q |
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| T |
14973972 |
ctaccttgaattaatgaatagtcgtggtttgttcacttctgaccaagacttgttcaatgataagagaacaaagggattagtcacttcatttgccaataat |
14973873 |
T |
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| Q |
119 |
cagaagctgttttttgagaagttttccgttgctattactaagatgagtcaattgagtgtgttgacgggtaatcaaggtgaaattcgtgctaagtgcaatg |
218 |
Q |
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| T |
14973872 |
cagaagctgttttttgagaagttttccgttgctattactaagatgagtcaattgagtgtgttgacgggtaatcaaggtgaaattcgcgctaagtgcaatg |
14973773 |
T |
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| Q |
219 |
tttcaaacacgaagtaagccatctagataaagcttatttgtgtaccgtcaataagagctagctcaattttcgatgttgatattgtttgattgaacatctt |
318 |
Q |
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| T |
14973772 |
ttgtaaacacaaagtaagccatcttgataaagcttatttgtgtaccgtcaataagagctagctcaattttcgatgttgatattgtttgattgaacatctt |
14973673 |
T |
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| Q |
319 |
cattccagttcgaacctatgat |
340 |
Q |
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| T |
14973672 |
cattccagttcaaacctatgat |
14973651 |
T |
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