View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14289_low_55 (Length: 287)
Name: NF14289_low_55
Description: NF14289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14289_low_55 |
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Alignment Details
Target: chr6 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 24 - 199
Target Start/End: Original strand, 35240071 - 35240246
Alignment:
| Q |
24 |
gatgatgatgatgaagataatgatggaagaagaatgaatcct---cttggctgattatggttccaattccgattcgaattcgaattccttctgggactgg |
120 |
Q |
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| T |
35240071 |
gatgatgatgatgaagataatgatggaagaagaatgaatcctcctcttggctgattatggttccgattccgattcggattcgaattccttctgggactgg |
35240170 |
T |
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| Q |
121 |
gaggatggatgatggtgtaagtacagtggcagtgcagagaataataataattcatcgccactcaactgaacggtggtgt |
199 |
Q |
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|||||||||||||||||||||||||||| | ||| |||| ||||||||||||||||||||||||||||||||||||| |
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| T |
35240171 |
gaggatggatgatggtgtaagtacagtgacggtgaagag---aataataattcatcgccactcaactgaacggtggtgt |
35240246 |
T |
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