View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14289_low_67 (Length: 253)
Name: NF14289_low_67
Description: NF14289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14289_low_67 |
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Alignment Details
Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 3050818 - 3051056
Alignment:
| Q |
1 |
tgcttttgttatcattccatgaaaaccttcatcttgtgttggcaattttggcattaacagcagggagtgctggagtggcgatagcagatgtgaccattga |
100 |
Q |
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| T |
3050818 |
tgcttttgttatcattccatgaaaaccttcatcttgtgttggcaattttggcattaacagcagggagtgctggagtggcgatagcagatgtgaccattga |
3050917 |
T |
|
| Q |
101 |
tgcatgtgttgcacagaacagtatctctcatccttcccttgcttctgacatgcaaagtttatgtgcctttagttcttctattggcgcactattaggattc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3050918 |
tgcatgtgttgcacagaacagtatctctcatccttcccttgcttctgacatgcaaagtttatgtgcctttagttcttctattggcgcactattaggattc |
3051017 |
T |
|
| Q |
201 |
tctattagtggcatctttgttcaccttataggccctatg |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
3051018 |
tctattagtggcatctttgttcaccttataggccctatg |
3051056 |
T |
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