View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14289_low_75 (Length: 239)
Name: NF14289_low_75
Description: NF14289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14289_low_75 |
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Alignment Details
Target: chr5 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 30886168 - 30886330
Alignment:
| Q |
1 |
agtgaaagatcttaactactcaaatggatgaatgaattgattacacgatgcgtccgtaaaatcaaaagagaaatatactctaatgatgatgcaaattgca |
100 |
Q |
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| T |
30886168 |
agtgaaagatcttaactactcaaatggatgaatgaattgattacacgatgcgtccgtaaaatcaaaaaagaaatatactataatgatgatgcaaattgca |
30886267 |
T |
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| Q |
101 |
atacattatgatttgtttaattgat-ggttaattaggggagctcgaagtaccgtcaacatcatg |
163 |
Q |
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| T |
30886268 |
atacattatgattcg-ttaattgttgggttaattaggggagctcgaaggaccgtcaacatcatg |
30886330 |
T |
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