View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14291_low_2 (Length: 561)
Name: NF14291_low_2
Description: NF14291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14291_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 499; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 499; E-Value: 0
Query Start/End: Original strand, 10 - 519
Target Start/End: Complemental strand, 42217939 - 42217429
Alignment:
| Q |
10 |
atgaagggacaaattaattctccaataataattatgattatgcat-atatccaatattgtggaatttaattgaatgcagaggaggagaatgtggtatctg |
108 |
Q |
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| T |
42217939 |
atgaagggacaaattaattctccaataataattatgattatgcattatatccaatattgtggaatttaattgaatgcagaggaggagaatgtggtatctg |
42217840 |
T |
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| Q |
109 |
tgtttccaaatacataccataaactacacacaacaaggtcatgggatttcttaggaatgcccctaaaggtgaagagaaatcccaacatagaaagtcacat |
208 |
Q |
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| T |
42217839 |
tgtttccaaatacataccataaactacacacaacaaggtcatgggatttcttaggaatgcccctaaaggtgaagagaaatcccaacatagaaagtcacat |
42217740 |
T |
|
| Q |
209 |
cattataggcgtgttagacacaggtatatgtatatatagattaataagaaaatatacatttctcggataagtataacaaaaatgtattgtatagtataat |
308 |
Q |
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| T |
42217739 |
cattataggcgtgttagacacaggtatatgtatatatagattaataagaaaatatacatttctcggataagtataacaaaaatgtattgtatagtataat |
42217640 |
T |
|
| Q |
309 |
aaataaatgatgaaatatgtaaacaggtatttgggttgattgccccagtttcaatgatgaggggtttggacctcccccacgtagatggaaaggcaagtgt |
408 |
Q |
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| T |
42217639 |
aaataaatgatgaaatatgtaaacaggtatttgggttgattgccccagtttcaatgatgaggggtttggacctcccccacgtagatggaaaggcaagtgt |
42217540 |
T |
|
| Q |
409 |
gtacagggaggcaacttcacaggctgcaacaagtattcttctactcctatatgccttcactcataatcccaacaccatacaaataatataagtataactt |
508 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42217539 |
gtacagggaggcaacttcacaggctgcaacaagtattcttctactcctatatgcattcactcataatcccaacaccatacaaataatataagtataactt |
42217440 |
T |
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| Q |
509 |
aattctttcaa |
519 |
Q |
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||||||||||| |
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| T |
42217439 |
aattctttcaa |
42217429 |
T |
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