View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14293_low_1 (Length: 728)

Name: NF14293_low_1
Description: NF14293
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14293_low_1
NF14293_low_1
[»] chr7 (71 HSPs)
chr7 (19-410)||(4321070-4321461)
chr7 (450-721)||(4320711-4320976)
chr7 (19-281)||(30108680-30108943)
chr7 (19-281)||(45464897-45465160)
chr7 (19-261)||(48302286-48302530)
chr7 (19-201)||(34692468-34692651)
chr7 (279-410)||(30108597-30108728)
chr7 (279-410)||(45465112-45465243)
chr7 (283-410)||(46994692-46994819)
chr7 (279-405)||(3690187-3690313)
chr7 (283-410)||(33775440-33775567)
chr7 (279-410)||(47339808-47339939)
chr7 (281-410)||(8421448-8421577)
chr7 (279-410)||(36762608-36762739)
chr7 (279-393)||(36756811-36756925)
chr7 (279-393)||(36766335-36766449)
chr7 (281-410)||(35342457-35342586)
chr7 (279-406)||(33037729-33037857)
chr7 (279-410)||(46810737-46810867)
chr7 (279-410)||(40785476-40785607)
chr7 (279-377)||(2168762-2168860)
chr7 (279-408)||(38614720-38614849)
chr7 (279-403)||(23955213-23955337)
chr7 (19-99)||(11685375-11685455)
chr7 (190-278)||(2168719-2168807)
chr7 (42-118)||(19712022-19712098)
chr7 (190-278)||(36756768-36756856)
chr7 (190-278)||(36762565-36762653)
chr7 (190-278)||(36766292-36766380)
chr7 (190-278)||(38614677-38614765)
chr7 (190-278)||(47339894-47339982)
chr7 (191-278)||(33037812-33037899)
chr7 (39-105)||(34784311-34784377)
chr7 (192-278)||(46994778-46994864)
chr7 (190-278)||(33775526-33775614)
chr7 (190-277)||(3690269-3690356)
chr7 (42-120)||(1547404-1547482)
chr7 (190-276)||(35342545-35342631)
chr7 (353-410)||(35344325-35344382)
chr7 (190-278)||(23955170-23955258)
chr7 (279-379)||(34785040-34785140)
chr7 (193-277)||(46810823-46810907)
chr7 (191-278)||(40785434-40785521)
chr7 (190-276)||(8421536-8421622)
chr7 (353-410)||(8423316-8423373)
chr7 (19-98)||(7403500-7403579)
chr7 (351-410)||(38613514-38613573)
chr7 (351-406)||(46996735-46996790)
chr7 (351-410)||(47341719-47341778)
chr7 (279-387)||(11685567-11685675)
chr7 (20-100)||(40785260-40785340)
chr7 (351-410)||(2167511-2167570)
chr7 (160-261)||(34784966-34785068)
chr7 (20-105)||(36766119-36766204)
chr7 (20-100)||(2168565-2168645)
chr7 (53-97)||(12904046-12904090)
chr7 (329-405)||(20479695-20479771)
chr7 (283-363)||(34692680-34692760)
chr7 (337-405)||(35403603-35403671)
chr7 (353-408)||(33038832-33038887)
chr7 (26-105)||(37791967-37792046)
chr7 (279-349)||(34784132-34784202)
chr7 (160-261)||(34784174-34784276)
chr7 (71-113)||(35402320-35402362)
chr7 (491-532)||(4054184-4054225)
chr7 (493-534)||(5245061-5245102)
chr7 (493-534)||(11430633-11430674)
chr7 (337-410)||(23953837-23953910)
chr7 (20-105)||(23955014-23955099)
chr7 (20-105)||(36756595-36756680)
chr7 (20-105)||(36762392-36762477)
[»] chr4 (66 HSPs)
chr4 (19-281)||(39190532-39190795)
chr4 (19-281)||(39084865-39085128)
chr4 (19-278)||(39922720-39922980)
chr4 (19-281)||(44992923-44993186)
chr4 (19-281)||(43778504-43778767)
chr4 (19-281)||(5485765-5486028)
chr4 (19-263)||(42879417-42879662)
chr4 (19-261)||(32653344-32653587)
chr4 (279-410)||(44992840-44992971)
chr4 (279-410)||(39085080-39085211)
chr4 (279-407)||(39922935-39923063)
chr4 (279-410)||(43778421-43778552)
chr4 (279-400)||(39190747-39190868)
chr4 (294-410)||(42879307-42879423)
chr4 (84-261)||(15450194-15450372)
chr4 (279-386)||(27626656-27626763)
chr4 (279-408)||(2828339-2828468)
chr4 (281-410)||(44792966-44793095)
chr4 (279-410)||(51040767-51040898)
chr4 (279-408)||(5485980-5486109)
chr4 (281-410)||(35997697-35997826)
chr4 (281-406)||(10371093-10371218)
chr4 (281-410)||(47942676-47942805)
chr4 (279-406)||(4520379-4520506)
chr4 (281-406)||(10767880-10768005)
chr4 (279-386)||(43823498-43823604)
chr4 (315-410)||(44556652-44556747)
chr4 (19-116)||(230729-230826)
chr4 (160-278)||(2828265-2828384)
chr4 (19-125)||(13438125-13438231)
chr4 (19-94)||(25994822-25994897)
chr4 (190-278)||(35997652-35997740)
chr4 (279-386)||(34460281-34460388)
chr4 (279-405)||(230473-230599)
chr4 (190-276)||(10371177-10371263)
chr4 (190-276)||(47942631-47942717)
chr4 (42-254)||(13450042-13450258)
chr4 (190-278)||(27626613-27626701)
chr4 (282-381)||(2348817-2348915)
chr4 (190-261)||(10767835-10767906)
chr4 (190-261)||(44556744-44556815)
chr4 (197-276)||(44793054-44793133)
chr4 (190-259)||(34460362-34460431)
chr4 (353-406)||(44794795-44794848)
chr4 (353-410)||(47941843-47941900)
chr4 (190-278)||(4520336-4520424)
chr4 (353-408)||(2350542-2350597)
chr4 (351-406)||(10372739-10372794)
chr4 (351-410)||(44558526-44558585)
chr4 (160-266)||(2348885-2348990)
chr4 (351-406)||(10762617-10762672)
chr4 (353-408)||(35996097-35996152)
chr4 (191-278)||(51040853-51040940)
chr4 (19-105)||(2691688-2691774)
chr4 (19-100)||(10544694-10544775)
chr4 (329-405)||(833260-833336)
chr4 (329-405)||(5439623-5439699)
chr4 (279-379)||(15450344-15450444)
chr4 (337-405)||(43507204-43507272)
chr4 (337-405)||(43508637-43508705)
chr4 (71-113)||(319623-319665)
chr4 (71-113)||(4172462-4172504)
chr4 (71-113)||(33265707-33265749)
chr4 (71-112)||(5438162-5438203)
chr4 (493-534)||(40561899-40561940)
chr4 (244-281)||(42879390-42879427)
[»] chr3 (63 HSPs)
chr3 (19-281)||(37865499-37865762)
chr3 (19-261)||(41945812-41946055)
chr3 (279-400)||(37865426-37865547)
chr3 (279-410)||(33851014-33851145)
chr3 (279-410)||(45897082-45897213)
chr3 (283-408)||(23887232-23887357)
chr3 (279-410)||(33111873-33112004)
chr3 (279-410)||(1847573-1847704)
chr3 (279-410)||(40508525-40508656)
chr3 (279-410)||(48635301-48635432)
chr3 (279-410)||(18428781-18428910)
chr3 (279-375)||(23775581-23775677)
chr3 (279-410)||(45255515-45255646)
chr3 (279-392)||(2975510-2975623)
chr3 (190-278)||(48635258-48635346)
chr3 (287-367)||(51453878-51453958)
chr3 (279-410)||(31885550-31885680)
chr3 (19-108)||(40963098-40963187)
chr3 (281-406)||(40998551-40998676)
chr3 (190-278)||(23887316-23887404)
chr3 (279-410)||(24381776-24381908)
chr3 (190-278)||(45897168-45897256)
chr3 (190-277)||(33111960-33112047)
chr3 (190-277)||(40508612-40508699)
chr3 (19-94)||(30501404-30501479)
chr3 (187-268)||(2975588-2975669)
chr3 (21-105)||(1847376-1847460)
chr3 (191-278)||(24381862-24381950)
chr3 (190-278)||(33851100-33851188)
chr3 (351-406)||(23774188-23774243)
chr3 (351-410)||(40508944-40509003)
chr3 (190-261)||(40998650-40998721)
chr3 (160-278)||(45255601-45255720)
chr3 (19-105)||(26448041-26448126)
chr3 (337-406)||(23888791-23888860)
chr3 (279-404)||(30501155-30501280)
chr3 (19-100)||(49494788-49494869)
chr3 (214-274)||(18428869-18428929)
chr3 (19-110)||(32842718-32842809)
chr3 (337-403)||(53092662-53092728)
chr3 (20-105)||(2975753-2975838)
chr3 (198-278)||(23775546-23775626)
chr3 (214-278)||(31885635-31885699)
chr3 (19-107)||(33051167-33051255)
chr3 (327-379)||(49494539-49494591)
chr3 (351-406)||(41021036-41021091)
chr3 (351-410)||(48633909-48633968)
chr3 (330-395)||(33051444-33051509)
chr3 (222-278)||(1847562-1847618)
chr3 (337-405)||(38193494-38193562)
chr3 (279-379)||(41946027-41946127)
chr3 (337-405)||(46308844-46308912)
chr3 (337-405)||(53094257-53094325)
chr3 (355-410)||(18430308-18430363)
chr3 (351-410)||(33113213-33113272)
chr3 (337-396)||(46611287-46611346)
chr3 (20-90)||(31885827-31885897)
chr3 (337-387)||(31887471-31887521)
chr3 (337-403)||(38191934-38192000)
chr3 (71-113)||(38192233-38192275)
chr3 (71-113)||(46310133-46310175)
chr3 (71-113)||(46609499-46609541)
chr3 (279-364)||(5127375-5127460)
[»] chr2 (41 HSPs)
chr2 (19-281)||(11021648-11021911)
chr2 (19-281)||(28247888-28248151)
chr2 (279-410)||(11021565-11021696)
chr2 (279-410)||(28248103-28248234)
chr2 (283-410)||(33225-33352)
chr2 (19-261)||(38149750-38149971)
chr2 (281-410)||(41708360-41708489)
chr2 (279-387)||(42003418-42003526)
chr2 (281-410)||(41072-41201)
chr2 (279-410)||(42880739-42880870)
chr2 (279-410)||(37418697-37418828)
chr2 (19-107)||(363399-363487)
chr2 (281-407)||(15373818-15373944)
chr2 (193-278)||(42880699-42880784)
chr2 (353-410)||(39588-39645)
chr2 (41-108)||(11313124-11313191)
chr2 (190-276)||(41708315-41708401)
chr2 (353-410)||(41706571-41706628)
chr2 (32-105)||(2359394-2359467)
chr2 (353-410)||(15372531-15372588)
chr2 (19-107)||(7744976-7745064)
chr2 (52-100)||(10715407-10715455)
chr2 (190-278)||(37418654-37418742)
chr2 (194-278)||(42003379-42003463)
chr2 (19-98)||(17948645-17948724)
chr2 (351-406)||(29909693-29909748)
chr2 (351-408)||(37417307-37417364)
chr2 (190-266)||(15373773-15373849)
chr2 (160-266)||(40997-41103)
chr2 (237-278)||(33311-33352)
chr2 (351-408)||(15432362-15432419)
chr2 (326-395)||(17948902-17948971)
chr2 (320-405)||(24205635-24205720)
chr2 (337-405)||(16764595-16764663)
chr2 (351-402)||(39430-39481)
chr2 (337-408)||(25619694-25619765)
chr2 (351-385)||(42001667-42001701)
chr2 (20-105)||(4047670-4047755)
chr2 (493-534)||(33843935-33843976)
chr2 (493-534)||(34856041-34856082)
chr2 (493-534)||(34871103-34871144)
[»] chr6 (23 HSPs)
chr6 (19-281)||(17950676-17950939)
chr6 (19-248)||(35174530-35174760)
chr6 (19-256)||(4289558-4289796)
chr6 (19-251)||(34345037-34345270)
chr6 (279-410)||(17950593-17950724)
chr6 (304-410)||(35174423-35174529)
chr6 (279-410)||(30639643-30639774)
chr6 (281-396)||(4646146-4646261)
chr6 (281-406)||(29114706-29114831)
chr6 (190-278)||(30639729-30639817)
chr6 (353-410)||(4641387-4641444)
chr6 (351-406)||(3018465-3018520)
chr6 (190-261)||(29114661-29114732)
chr6 (353-410)||(2968171-2968228)
chr6 (200-276)||(4646111-4646187)
chr6 (279-395)||(31210368-31210484)
chr6 (35-76)||(31210181-31210222)
chr6 (19-110)||(17936251-17936342)
chr6 (351-406)||(29077364-29077419)
chr6 (351-406)||(29112336-29112391)
chr6 (71-110)||(13610999-13611038)
chr6 (71-110)||(32437480-32437519)
chr6 (493-534)||(22481401-22481442)
[»] chr1 (47 HSPs)
chr1 (19-281)||(5784580-5784843)
chr1 (19-281)||(11152660-11152923)
chr1 (279-410)||(5784795-5784926)
chr1 (283-410)||(31803632-31803759)
chr1 (279-410)||(45379117-45379248)
chr1 (279-410)||(11152577-11152708)
chr1 (283-410)||(46636797-46636924)
chr1 (279-410)||(35478119-35478250)
chr1 (281-410)||(27952430-27952559)
chr1 (279-410)||(33679291-33679422)
chr1 (279-405)||(42136172-42136298)
chr1 (279-405)||(44159222-44159348)
chr1 (279-408)||(6577033-6577162)
chr1 (309-405)||(18180537-18180633)
chr1 (281-406)||(47264160-47264285)
chr1 (19-261)||(25172745-25172991)
chr1 (160-278)||(46636883-46637002)
chr1 (190-278)||(6576990-6577078)
chr1 (190-278)||(31803585-31803673)
chr1 (190-278)||(45379203-45379291)
chr1 (190-278)||(44159179-44159267)
chr1 (190-277)||(33679378-33679465)
chr1 (190-278)||(42136129-42136217)
chr1 (190-245)||(18180630-18180685)
chr1 (19-120)||(51123256-51123357)
chr1 (190-278)||(35478205-35478293)
chr1 (190-261)||(47264259-47264330)
chr1 (286-363)||(34041763-34041840)
chr1 (349-410)||(44157465-44157526)
chr1 (353-396)||(27940654-27940697)
chr1 (351-410)||(33685281-33685340)
chr1 (351-406)||(36895543-36895598)
chr1 (351-410)||(42134514-42134573)
chr1 (351-406)||(46638840-46638895)
chr1 (279-386)||(51123483-51123590)
chr1 (20-105)||(6576817-6576902)
chr1 (215-276)||(27952410-27952471)
chr1 (337-406)||(47269475-47269544)
chr1 (53-105)||(18058124-18058176)
chr1 (329-405)||(26223624-26223700)
chr1 (53-105)||(42558251-42558303)
chr1 (337-405)||(46582047-46582115)
chr1 (351-410)||(18183976-18184035)
chr1 (351-406)||(31801669-31801724)
chr1 (71-110)||(46582303-46582342)
chr1 (279-316)||(25172963-25173000)
chr1 (279-364)||(43870242-43870327)
[»] chr8 (74 HSPs)
chr8 (19-281)||(40019271-40019534)
chr8 (19-261)||(28432356-28432597)
chr8 (279-410)||(40019188-40019319)
chr8 (279-410)||(24526928-24527059)
chr8 (279-410)||(31823404-31823535)
chr8 (279-410)||(32824199-32824330)
chr8 (283-410)||(33748364-33748491)
chr8 (279-400)||(1322242-1322363)
chr8 (279-410)||(461208-461339)
chr8 (279-410)||(42894808-42894939)
chr8 (279-387)||(33158711-33158819)
chr8 (279-387)||(33368814-33368922)
chr8 (279-410)||(37524890-37525021)
chr8 (20-266)||(33158786-33159036)
chr8 (285-410)||(31199517-31199642)
chr8 (279-399)||(9876490-9876610)
chr8 (20-256)||(33368899-33369139)
chr8 (19-110)||(9186346-9186437)
chr8 (20-278)||(9876273-9876535)
chr8 (19-105)||(11031698-11031784)
chr8 (283-405)||(25707233-25707355)
chr8 (48-278)||(31823215-31823449)
chr8 (190-278)||(33748450-33748538)
chr8 (24-105)||(25705575-25705656)
chr8 (279-383)||(8655915-8656019)
chr8 (19-107)||(10268091-10268179)
chr8 (160-278)||(1322168-1322287)
chr8 (283-405)||(25373554-25373676)
chr8 (20-105)||(25356625-25356710)
chr8 (19-107)||(10269250-10269338)
chr8 (283-387)||(25370581-25370685)
chr8 (41-105)||(25370802-25370866)
chr8 (190-278)||(32824156-32824244)
chr8 (195-278)||(24527014-24527097)
chr8 (20-105)||(25402522-25402607)
chr8 (20-105)||(25707031-25707116)
chr8 (353-410)||(31201178-31201235)
chr8 (19-105)||(15684048-15684134)
chr8 (190-276)||(31199605-31199691)
chr8 (351-405)||(33750417-33750471)
chr8 (279-349)||(38881493-38881563)
chr8 (42-120)||(44620409-44620487)
chr8 (28-105)||(10770640-10770717)
chr8 (279-360)||(12515166-12515247)
chr8 (294-387)||(25705354-25705447)
chr8 (191-278)||(37524976-37525063)
chr8 (20-105)||(25373352-25373437)
chr8 (20-105)||(38881694-38881779)
chr8 (294-386)||(25356405-25356497)
chr8 (190-254)||(25373507-25373571)
chr8 (279-395)||(44620597-44620713)
chr8 (351-410)||(42897807-42897866)
chr8 (19-105)||(11719750-11719836)
chr8 (332-405)||(15308240-15308313)
chr8 (332-405)||(15488609-15488682)
chr8 (353-406)||(31821454-31821507)
chr8 (329-405)||(601680-601756)
chr8 (319-395)||(9186613-9186689)
chr8 (329-405)||(13106841-13106917)
chr8 (329-405)||(27404247-27404323)
chr8 (353-405)||(38548831-38548883)
chr8 (190-266)||(38881530-38881605)
chr8 (337-405)||(42943410-42943478)
chr8 (191-278)||(461294-461381)
chr8 (351-410)||(1320649-1320708)
chr8 (160-266)||(8655841-8655948)
chr8 (329-387)||(11031484-11031542)
chr8 (26-80)||(12515395-12515449)
chr8 (190-256)||(25707186-25707252)
chr8 (71-113)||(35510516-35510558)
chr8 (337-386)||(8608294-8608343)
chr8 (330-363)||(11719526-11719559)
chr8 (493-534)||(21925649-21925690)
chr8 (337-402)||(33761109-33761174)
[»] chr5 (39 HSPs)
chr5 (19-281)||(42619404-42619667)
chr5 (279-410)||(32089853-32089984)
chr5 (279-410)||(40330443-40330574)
chr5 (280-410)||(33257689-33257819)
chr5 (279-383)||(43316839-43316943)
chr5 (279-410)||(42619321-42619452)
chr5 (279-408)||(38176666-38176795)
chr5 (279-408)||(38203890-38204019)
chr5 (279-410)||(32835908-32836039)
chr5 (279-410)||(35291080-35291211)
chr5 (279-401)||(18726606-18726725)
chr5 (48-278)||(32089664-32089898)
chr5 (20-278)||(18726680-18726942)
chr5 (19-105)||(1344522-1344608)
chr5 (190-278)||(32835994-32836082)
chr5 (190-278)||(40330400-40330488)
chr5 (279-387)||(24232207-24232315)
chr5 (190-278)||(38176750-38176838)
chr5 (190-278)||(38203974-38204062)
chr5 (190-278)||(35291166-35291254)
chr5 (190-278)||(43316898-43316986)
chr5 (20-125)||(24497789-24497894)
chr5 (190-278)||(33257645-33257733)
chr5 (349-406)||(35395369-35395426)
chr5 (22-105)||(1343484-1343567)
chr5 (349-408)||(38596902-38596961)
chr5 (191-261)||(24232287-24232357)
chr5 (20-90)||(40330226-40330296)
chr5 (351-406)||(18728635-18728690)
chr5 (19-105)||(6116610-6116696)
chr5 (279-393)||(1344742-1344856)
chr5 (351-408)||(43318093-43318150)
chr5 (329-405)||(40782187-40782263)
chr5 (329-392)||(24498045-24498108)
chr5 (351-406)||(33256436-33256491)
chr5 (351-410)||(38178126-38178185)
chr5 (351-410)||(38205350-38205409)
chr5 (351-393)||(24496792-24496834)
chr5 (42-120)||(27350259-27350337)
[»] scaffold1041 (5 HSPs)
scaffold1041 (283-386)||(2823-2926)
scaffold1041 (284-401)||(2139-2252)
scaffold1041 (41-105)||(2642-2706)
scaffold1041 (42-105)||(2360-2423)
scaffold1041 (190-252)||(2776-2838)
[»] scaffold0477 (1 HSPs)
scaffold0477 (353-410)||(6669-6726)
[»] scaffold0070 (2 HSPs)
scaffold0070 (20-105)||(57673-57758)
scaffold0070 (284-345)||(57498-57559)
[»] scaffold0006 (1 HSPs)
scaffold0006 (19-100)||(37998-38079)
[»] scaffold0597 (1 HSPs)
scaffold0597 (493-534)||(9046-9087)
[»] scaffold1848 (1 HSPs)
scaffold1848 (493-534)||(473-514)


Alignment Details
Target: chr7 (Bit Score: 340; Significance: 0; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 19 - 410
Target Start/End: Complemental strand, 4321461 - 4321070
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4321461 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaatagcctttggaga 4321362  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaattaggtcattatcggccaaattaatctctgtctacg 218  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||    
T  4321361 aggaagagagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaattaggtcattatcggccaaattagtccctgcctacg 4321262  T
Q  219 tggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaactgagaggttaacggtcacgtcagcaccgtcaacgctccgt 318  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||| || |||||||||| |    
T  4321261 tggcgtctgatatgtgagaggttaacggccacgtcagtcccgtcaacgctccgtttgaactgagaggttaacggccacgtcagccccatcaacgctccat 4321162  T
Q  319 ttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  4321161 ttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattaagggacgaagttggccgacccgt 4321070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 450 - 721
Target Start/End: Complemental strand, 4320976 - 4320711
Alignment:
Q  450 tccgcaagtgactctctcttctccgacgaaccactaacacactggcgcagtggccgaccaccacaaggtggcggcgccgccgccgcaaccacccaaacct 549  Q
    ||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4320976 tccgcaagtaactctctcttcttcgacgaaccactaacacgctggcgcagtggccgaccaccacaaggtggcggcgctgccgccgcaaccacccaaacct 4320877  T
Q  550 ctccgtttcaaaaaatttctacttcttcagacatccattttcatccttattacaaatccgcacttagttttcaaaaataaacaacgattcgtcctagatc 649  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||||    
T  4320876 ctccgtttcaaaaattttctacttcttcagacatccattttcatccttat------tccgcacttagttttcaaaaataaacaacgattcgtcctagatc 4320783  T
Q  650 taacatttgagattcgaaaatttttgaaacacaaagaacgaaactgaaaggaaatggctgttacctttgctt 721  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4320782 taacatttgagattcgaaaatttttgaaacacaaagaacgaaactgaaaggaaatggccgttacctttgctt 4320711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 19 - 281
Target Start/End: Complemental strand, 30108943 - 30108680
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  | |||||||    
T  30108943 aattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaatagtcgttggaga 30108844  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||    
T  30108843 aggaagagagccgttggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaatttaggtcattatcggccaaattagtccctgcctac 30108744  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaactga 281  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  30108743 gtggcgtctgacatgtgagaggttaacggccacgtcagccccgttaacgctccgtttgaactga 30108680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 19 - 281
Target Start/End: Original strand, 45464897 - 45465160
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||  | |||||||    
T  45464897 aattattgaaagaaaatttggagattttggagtgtagattacacattgtaaaattagagttccaattttatatatttgaggaagaaatagtcgttggaga 45464996  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
    ||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||    
T  45464997 aggaagagagccgttggggaagaagagcaatttcctgtaattcaatcaacttagtccttgaaaatttaggtcattatcggccaaattagtccctgcctac 45465096  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaactga 281  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  45465097 gtggcgtctgacatgtgagaggttaacggccacgtcagccccgttaacgctccgtttgaactga 45465160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 48302530 - 48302286
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    |||||||||||| |||||| |||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||| |||||| || |||||||    
T  48302530 aattattggaagcaaatttggagattttggagtgtagaatacacattgtaaaattagagtttcaattttatatatttggggaagaaatagccgttggaga 48302431  T
Q  119 aggaagatagccatt-ggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtcta 216  Q
    ||||||| |||| || |||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||| ||| |  |||  ||    
T  48302430 aggaagagagccgttgggggaagaagagcaattttctgaaattcaatcaacttagtccttgaaaatttaagtcattatcggccaacttagttcctgctta 48302331  T
Q  217 cgtggcgtctgatatgtgagaggttaacggccacgtcagccccgt 261  Q
    |||||| ||||| || ||||| ||||||| |||| ||||| ||||    
T  48302330 cgtggcatctgacatatgagatgttaacgaccacatcagcaccgt 48302286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 34692468 - 34692651
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| || |||||||    
T  34692468 aattattggaagaaaatttggagattttggagtgtagattaaacattgtaaaattagggttccaattttatatatttggggaagaaatagccgttggaga 34692567  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtcctt-gaaaattaggtcattatcggccaa 201  Q
     |||||| || | ||||||||||||| |||||| |||||| |||||||||||||||||| || | |||||||||||||||||||    
T  34692568 tggaagagagtcgttggggaagaagatcaattttctgaaaatcaatcaacttagtccttggatatttaggtcattatcggccaa 34692651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 30108728 - 30108597
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30108728 tgagaggttaacggccacgtcagccccgttaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 30108629  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| ||||||||||||||||||||||    
T  30108628 gcataattgagggacgaagttggccgacccgt 30108597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 279 - 410
Target Start/End: Original strand, 45465112 - 45465243
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45465112 tgagaggttaacggccacgtcagccccgttaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 45465211  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| |||||||||||| |||||||||    
T  45465212 gcataattgagggacgaagttgaccgacccgt 45465243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 283 - 410
Target Start/End: Complemental strand, 46994819 - 46994692
Alignment:
Q  283 aggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcat 382  Q
    |||||||||  ||||||| | |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46994819 aggttaacgaccacgtcacccccgttaacgctccgtttgaacagaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcat 46994720  T
Q  383 aattgtgggacgaagttggccgacccgt 410  Q
    |||||  |||||||||||||||||||||    
T  46994719 aattgaaggacgaagttggccgacccgt 46994692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 279 - 405
Target Start/End: Complemental strand, 3690313 - 3690187
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    ||||||||||||| |||||||||| |||| |||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3690313 tgagaggttaacgatcacgtcagccccgttaacgctccgtttgaatagaaggactaacttgattgacatttaacaaattcaaggattaaattgatatttc 3690214  T
Q  379 gcataattgtgggacgaagttggccga 405  Q
    ||||||||| || ||||||||||||||    
T  3690213 gcataattgaggaacgaagttggccga 3690187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 283 - 410
Target Start/End: Complemental strand, 33775567 - 33775440
Alignment:
Q  283 aggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcat 382  Q
    ||||||||||||| |||||| |||| || ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33775567 aggttaacggtcatgtcagccccgttaatgctccgtttgaacagaaggactaacttgattgacatttaataaattcagggattaaattgatatttcgcat 33775468  T
Q  383 aattgtgggacgaagttggccgacccgt 410  Q
    |||||  ||||||||||| |||||||||    
T  33775467 aattgaaggacgaagttgaccgacccgt 33775440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 47339939 - 47339808
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||| ||||||||||| |||| ||| |||||||||||| |||||| |||||||||||||||||||||||||||  |||||||||||||||||    
T  47339939 tgagaggttaacagtcacgtcagccccgttaacactccgtttgaacagaaggattaacttgattgacatttaacaaattcaaagattaaattgatatttc 47339840  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    |||| |||| | ||||||||||||||||||||    
T  47339839 gcatcattgagagacgaagttggccgacccgt 47339808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 8421577 - 8421448
Alignment:
Q  281 agaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgc 380  Q
    |||||||||||| ||||||||| |||| ||||  |||||||| | |||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  8421577 agaggttaacggccacgtcagccccgttaacggcccgtttgaccagaaggactaaattgattgacaattaacaaattcagggattaaattgatatttcgc 8421478  T
Q  381 ataattgtgggacgaagttggccgacccgt 410  Q
    ||||||| |||||||| |||||||||||||    
T  8421477 ataattgagggacgaatttggccgacccgt 8421448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 279 - 410
Target Start/End: Original strand, 36762608 - 36762739
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||  |||| |||||||||||||||| ||||  ||||||||||||||||||||||||||||||| |||||||||||||||    
T  36762608 tgagaggttaacggccacgtcagtcccgttaacgctccgtttgaacagaagagctaacttgattgacatttaacaaattcaggggttaaattgatatttc 36762707  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
     |||||||| ||||| || |||||||| ||||    
T  36762708 acataattgagggactaatttggccgatccgt 36762739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 279 - 393
Target Start/End: Original strand, 36756811 - 36756925
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||  |||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  36756811 tgagaggttaacggccacgtcagtcccgttaacgctccgtttgaacagaagggctaacttgattgacatttaacaaattcagcgattaaattgatatttc 36756910  T
Q  379 gcataattgtgggac 393  Q
     |||||||| |||||    
T  36756911 acataattgagggac 36756925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 279 - 393
Target Start/End: Original strand, 36766335 - 36766449
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||  |||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  36766335 tgagaggttaacggccacgtcagtcccgttaacgctccgtttgaacagaagggctaacttgattgacatttaacaaattcagcgattaaattgatatttc 36766434  T
Q  379 gcataattgtgggac 393  Q
     |||||||| |||||    
T  36766435 acataattgagggac 36766449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 35342586 - 35342457
Alignment:
Q  281 agaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgc 380  Q
    |||||||||||  ||||||||| |||| ||||  |||||||| | |||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  35342586 agaggttaacgaccacgtcagccccgttaacggcccgtttgaccagaaggactaaattgattgacaattaacaaattcagggattaaattgatatttcgc 35342487  T
Q  381 ataattgtgggacgaagttggccgacccgt 410  Q
    ||||||| ||||| || |||||||||||||    
T  35342486 ataattgagggacaaatttggccgacccgt 35342457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 279 - 406
Target Start/End: Complemental strand, 33037857 - 33037729
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggatt-aaattgatattt 377  Q
    |||||||||||||  ||||||||| | |  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33037857 tgagaggttaacgaccacgtcagccctgctaacgctccgtttgaacagaaggactaacttgattgacatttaacaaattcagggattaaaattgatattt 33037758  T
Q  378 cgcataattgtgggacgaagttggccgac 406  Q
    | |||||||| |||| ||| |||||||||    
T  33037757 cacataattgagggatgaatttggccgac 33037729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 46810867 - 46810737
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||| ||||  |||| ||||||| |||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  46810867 tgagaggttaacggccacatcagtcccgttaacgctctgtttgaatagaagg-ctaacttgattgacatttaacaaattcagggattaaattgatatttc 46810769  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| ||||| || |||||||| ||||    
T  46810768 gcataattgagggactaatttggccgatccgt 46810737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 279 - 410
Target Start/End: Original strand, 40785476 - 40785607
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    ||||| |||||||| ||||||||  |||| || ||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  40785476 tgagatgttaacggccacgtcagtcccgttaatgctccatttgaacagaaagactaacttgattgacatttaacaaattcagggattagattgatatttc 40785575  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
     |||||||| | || ||| |||||||||||||    
T  40785576 acataattgagagatgaatttggccgacccgt 40785607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 279 - 377
Target Start/End: Original strand, 2168762 - 2168860
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatattt 377  Q
    |||||||||||||| ||||||||| |||| || ||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  2168762 tgagaggttaacggccacgtcagccccgttaatgctccgtttgaacagaaggactaacttgattgacatttaacaaattcaaggactaaattgatattt 2168860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 279 - 408
Target Start/End: Original strand, 38614720 - 38614849
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||| | |||| ||||||||||||||||  ||||||||||||||||||||||||||||| ||| ||| ||| |||||||||     
T  38614720 tgagaggttaacggccacgtcaaccccgttaacgctccgtttgaacataaggactaacttgattgacatttaacaaactcaaggactaagttgatatttt 38614819  T
Q  379 gcataattgtgggacgaagttggccgaccc 408  Q
    ||||||||| |||| ||| ||| |||||||    
T  38614820 gcataattgagggatgaatttgaccgaccc 38614849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 279 - 403
Target Start/End: Original strand, 23955213 - 23955337
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||| | | ||||||||| |||| |||| |||||||||||  || ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23955213 tgagaggttagctgccacgtcagccccgttaacggtccgtttgaacataatgactaacttgattgacatttaacaaattcagagattaaattgatatttc 23955312  T
Q  379 gcataattgtgggacgaagttggcc 403  Q
     |||||||  |||||||| ||||||    
T  23955313 acataattaagggacgaatttggcc 23955337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 11685375 - 11685455
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttgggg 99  Q
    |||||||| |||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11685375 aattattgaaagaaattttggagattttggagtgtagattacagattgtaaaattagggttccaattttatatatttgggg 11685455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 2168719 - 2168807
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| || ||| ||||||||||||||| |||||||||||||||||||||||||||||||| || | |||||||||||    
T  2168719 attatcggccaaattagtcactgcctacgtggcgtctgacatgtgagaggttaacggccacgtcagccccgttaatgctccgtttgaac 2168807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 19712022 - 19712098
Alignment:
Q  42 attttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||  |||||||    
T  19712022 attttggagtgtagattacagattgtaaaattagggttccaattttatatatttggggaagaaataactgttggaga 19712098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 36756768 - 36756856
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| || ||||||| ||||||||||| |||||||||||||||||||||||||| ||||| |||| |||||||||||    
T  36756768 attatcggccaaattagtccctgtctatgtggcgtctgacatgtgagaggttaacggccacgtcagtcccgttaacgctccgtttgaac 36756856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 36762565 - 36762653
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| || ||||||| ||||||||||| |||||||||||||||||||||||||| ||||| |||| |||||||||||    
T  36762565 attatcggccaaattagtccctgtctatgtggcgtctgacatgtgagaggttaacggccacgtcagtcccgttaacgctccgtttgaac 36762653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 36766292 - 36766380
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| || ||||||| ||||||||||| |||||||||||||||||||||||||| ||||| |||| |||||||||||    
T  36766292 attatcggccaaattagtccctgtctatgtggcgtctgacatgtgagaggttaacggccacgtcagtcccgttaacgctccgtttgaac 36766380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 38614677 - 38614765
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| || ||| ||||||||||||||| ||||||||||||||||||||||||| |||||| |||| |||||||||||    
T  38614677 attatcggccaaattagtccctgcctacgtggcgtctgacatgtgagaggttaacggccacgtcaaccccgttaacgctccgtttgaac 38614765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 47339982 - 47339894
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| ||||||||||||||||| |||| ||||||||||||||| | |||||||||||||| |||  |||||||||||    
T  47339982 attatcggccaaattagtctctgtctacgtggcgcctgacatgtgagaggttaacagtcacgtcagccccgttaacactccgtttgaac 47339894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 33037899 - 33037812
Alignment:
Q  191 ttatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    ||||||||||||||| |||||| ||||||||||||||| |||||||||||||||| |||||||||||| |  |||| |||||||||||    
T  33037899 ttatcggccaaattagtctctgcctacgtggcgtctgacatgtgagaggttaacgaccacgtcagccctgctaacgctccgtttgaac 33037812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 34784377 - 34784311
Alignment:
Q  39 gagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||    
T  34784377 gagattttggagtgtagattaaagattgtaaaattagggttccaattttatatatttggggaagaaa 34784311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 192 - 278
Target Start/End: Complemental strand, 46994864 - 46994778
Alignment:
Q  192 tatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||| |||||| ||||||||||||||| |||||| ||||||||| |||||||| |||||| |||| |||||||||||    
T  46994864 tatcggccaaattagtctctgcctacgtggcgtctgacatgtgaaaggttaacgaccacgtcacccccgttaacgctccgtttgaac 46994778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 33775614 - 33775526
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| || ||| ||||||||||||||| |||||| |||||||||| || ||||||||||| || | |||||||||||    
T  33775614 attatcggccaaattagtccctgcctacgtggcgtctgacatgtgaaaggttaacggtcatgtcagccccgttaatgctccgtttgaac 33775526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 3690356 - 3690269
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaa 277  Q
    |||||| ||||||||| || ||| |||||||||| |||| ||||||||||||||||  |||||||||||||| |||| ||||||||||    
T  3690356 attatcagccaaattagtccctgcctacgtggcgcctgacatgtgagaggttaacgatcacgtcagccccgttaacgctccgtttgaa 3690269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 1547404 - 1547482
Alignment:
Q  42 attttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggagaag 120  Q
    ||||| |||||| ||||| | ||||||||||||||||| |||||||||| ||||||||| |||||||||||||| ||||    
T  1547404 attttagagtgtggattaaagattgtaaaattagggtttcaattttatacatttggggaagaaataacctttggggaag 1547482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 190 - 276
Target Start/End: Complemental strand, 35342631 - 35342545
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttga 276  Q
    |||||||||||||||| || ||| ||||||||||| ||| |||| ||||||||||| ||||||||||||||| ||||  ||||||||    
T  35342631 attatcggccaaattagtccctgcctacgtggcgtatgacatgtaagaggttaacgaccacgtcagccccgttaacggcccgtttga 35342545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 353 - 410
Target Start/End: Original strand, 35344325 - 35344382
Alignment:
Q  353 aaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  35344325 aaattcagggattaaattgatatttcgcataattgagggacgaatttggctgacccgt 35344382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 23955170 - 23955258
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    ||||||||| |||||| || | | |||| |||||||||| ||||||||||||| | |||||||||||||||| |||| |||||||||||    
T  23955170 attatcggcgaaattagtccccgcctacatggcgtctgacatgtgagaggttagctgccacgtcagccccgttaacggtccgtttgaac 23955258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 279 - 379
Target Start/End: Original strand, 34785040 - 34785140
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||  |||||||||||||| ||| ||||  ||| || || ||||||| ||||||||||||| ||||||||||||| ||  ||||||||||    
T  34785040 tgagaggttaacgaccacgtcagcaccgttaacactccaattggacggagggactaaattgattgacattttacaaattcagggactattttgatatttc 34785139  T
Q  379 g 379  Q
    |    
T  34785140 g 34785140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 193 - 277
Target Start/End: Complemental strand, 46810907 - 46810823
Alignment:
Q  193 atcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaa 277  Q
    |||| |||||||| || ||| ||||||||||||||| ||||||||||||||||||||| |||| ||||| |||| || |||||||    
T  46810907 atcgaccaaattagtccctgcctacgtggcgtctgacatgtgagaggttaacggccacatcagtcccgttaacgctctgtttgaa 46810823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 278
Target Start/End: Original strand, 40785434 - 40785521
Alignment:
Q  191 ttatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    ||||||||||||||| || ||  ||||||||||||||| |||||||| ||||||||||||||||| ||||| || | ||| |||||||    
T  40785434 ttatcggccaaattagtccctacctacgtggcgtctgacatgtgagatgttaacggccacgtcagtcccgttaatgctccatttgaac 40785521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 190 - 276
Target Start/End: Complemental strand, 8421622 - 8421536
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttga 276  Q
    |||||||||||||||| ||  ||  |||||||||| ||| |||| ||||||||||||||||||||||||||| ||||  ||||||||    
T  8421622 attatcggccaaattagtccttgcatacgtggcgtatgacatgtaagaggttaacggccacgtcagccccgttaacggcccgtttga 8421536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 353 - 410
Target Start/End: Original strand, 8423316 - 8423373
Alignment:
Q  353 aaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||||||||||||||||||||||||||||| ||||| || ||||| |||||||    
T  8423316 aaattcagggattaaattgatatttcgcataattgagggacaaatttggctgacccgt 8423373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 7403500 - 7403579
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggg 98  Q
    ||||| |||||||||  || ||||||||||| | ||||||||| ||||||||| |||||||||||||| ||| |||||||    
T  7403500 aattaatggaagaaatcttggagattttggactctagattacatattgtaaaactagggttccaatttaatagatttggg 7403579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 351 - 410
Target Start/End: Original strand, 38613514 - 38613573
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||||||| ||| ||||||||||||||||||| |||| ||| |||||||||||||    
T  38613514 acaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgt 38613573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 46996735 - 46996790
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgac 406  Q
    |||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||    
T  46996735 acaaattcagtgactaagttgatatttcgcataattgagggacgaagttggccgac 46996790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 351 - 410
Target Start/End: Original strand, 47341719 - 47341778
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||||||| ||| ||||||||||||||||||| |||| ||| |||||||||||||    
T  47341719 acaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgt 47341778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 387
Target Start/End: Original strand, 11685567 - 11685675
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| |||||||||||||| ||| ||||  ||| || ||  |||||| ||||||||||| | ||||||||||  | ||| || |||||||    
T  11685567 tgagaggttaacggccacgtcagcaccgttaacactccaattggacagagtgactaaattgattgacatatgacaaattcagaaactaatttaatatttc 11685666  T
Q  379 gcataattg 387  Q
    | |||||||    
T  11685667 gtataattg 11685675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 40785260 - 40785340
Alignment:
Q  20 attattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttgggga 100  Q
    |||| |||| |||| ||| | |||||||||||||||||| || |||||| |||||||||| |||||||||| | |||||||    
T  40785260 attagtggaggaaattttggtgattttggagtgtagattgcagattgtacaattagggttacaattttatacaattgggga 40785340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 351 - 410
Target Start/End: Complemental strand, 2167570 - 2167511
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||||||| ||| ||||||||||||||||||| |||| ||| ||| |||||||||    
T  2167570 acaaattcagggactaagttgatatttcgcataattgagggatgaatttgaccgacccgt 2167511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 34784966 - 34785068
Alignment:
Q  160 tcaatcaacttagtccttgaaaatta-ggtcattatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccc 258  Q
    |||||||| || |||||||||||||  ||||| |||| ||||||||| ||  ||  || ||||| ||||| |||||||||||||||| |||||||||| |    
T  34784966 tcaatcaattttgtccttgaaaattttggtcactatcagccaaattagtccttgcttatgtggcatctgacatgtgagaggttaacgaccacgtcagcac 34785065  T
Q  259 cgt 261  Q
    |||    
T  34785066 cgt 34785068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 36766119 - 36766204
Alignment:
Q  20 attattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    ||||||||| |||| ||  | |||||| ||||||||||| || |||||| |||||||||| |||||||||| | ||||||| ||||    
T  36766119 attattggaggaaatttaggtgattttagagtgtagattgcagattgtataattagggtttcaattttatacaattggggaagaaa 36766204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 2168565 - 2168645
Alignment:
Q  20 attattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttgggga 100  Q
    ||||||||| |||| ||| | |||||| ||||||||||| || |||||  |||||||||| |||||||||| | |||||||    
T  2168565 attattggaggaaattttggtgattttagagtgtagattgcagattgtgtaattagggttacaattttatacaattgggga 2168645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 12904046 - 12904090
Alignment:
Q  53 tagattacacattgtaaaattagggttccaattttatatatttgg 97  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||    
T  12904046 tagattacagattgtaaaattagggttcaaattttatagatttgg 12904090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 329 - 405
Target Start/End: Original strand, 20479695 - 20479771
Alignment:
Q  329 ggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    ||||||| |||||||||||||   ||||||||||| ||| ||||||||||| | ||||  |||||||| ||||||||    
T  20479695 ggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccga 20479771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 34692680 - 34692760
Alignment:
Q  283 aggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcaggga 363  Q
    ||||||||||||||||||||||||| ||  |||  |||| || || |||| || ||||| ||||||| |||||||||||||    
T  34692680 aggttaacggtcacgtcagcaccgttaatcctcaatttggacggagggacaaaattgatggacattttacaaattcaggga 34692760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 405
Target Start/End: Original strand, 35403603 - 35403671
Alignment:
Q  337 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| ||||  |||||||| ||||||||    
T  35403603 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 35403671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 353 - 408
Target Start/End: Original strand, 33038832 - 33038887
Alignment:
Q  353 aaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgaccc 408  Q
    ||||||||||| ||| ||||||||||||||||||| |||| ||| ||| |||||||    
T  33038832 aaattcagggactaagttgatatttcgcataattgagggatgaatttgaccgaccc 33038887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 37792046 - 37791967
Alignment:
Q  26 ggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    |||||||| ||||| ||||||| | | ||| | ||| ||| ||| ||||||||||||| |||||||||||||||| ||||    
T  37792046 ggaagaaatttttgggattttgaactctaggtgacaaattataacattagggttccaaatttatatatttggggaagaaa 37791967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 279 - 349
Target Start/End: Complemental strand, 34784202 - 34784132
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacattt 349  Q
    |||||||||||||| |||||||||||||| ||| || |  ||| || || ||||||| |||||||||||||    
T  34784202 tgagaggttaacggccacgtcagcaccgttaacactgcaattggacggagggactaaattgattgacattt 34784132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 34784276 - 34784174
Alignment:
Q  160 tcaatcaacttagtccttgaaaatta-ggtcattatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccc 258  Q
    |||||||| || ||||||| |||||  ||||| |||| | ||||||| || |||  || ||||| | ||| ||||||||||||||||||||||||||| |    
T  34784276 tcaatcaatttcgtccttggaaattttggtcactatcagtcaaattagtccctgcttatgtggcatatgacatgtgagaggttaacggccacgtcagcac 34784177  T
Q  259 cgt 261  Q
    |||    
T  34784176 cgt 34784174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 35402362 - 35402320
Alignment:
Q  71 attagggttccaattttatatatttggggatgaaataaccttt 113  Q
    ||||||||||||| |||||||||||||||| |||||| |||||    
T  35402362 attagggttccaaatttatatatttggggaagaaatagccttt 35402320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 491 - 532
Target Start/End: Complemental strand, 4054225 - 4054184
Alignment:
Q  491 ctggcgcagtggccgaccaccacaaggtggcggcgccgccgc 532  Q
    ||||||| ||||||||||||| |||||||||| |||||||||    
T  4054225 ctggcgcggtggccgaccacctcaaggtggcgacgccgccgc 4054184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 493 - 534
Target Start/End: Complemental strand, 5245102 - 5245061
Alignment:
Q  493 ggcgcagtggccgaccaccacaaggtggcggcgccgccgccg 534  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||    
T  5245102 ggcgcggtggccggccacctcaaggtggcggcgccgccgccg 5245061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 493 - 534
Target Start/End: Original strand, 11430633 - 11430674
Alignment:
Q  493 ggcgcagtggccgaccaccacaaggtggcggcgccgccgccg 534  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||    
T  11430633 ggcgcggtggccggccacctcaaggtggcggcgccgccgccg 11430674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 23953910 - 23953837
Alignment:
Q  337 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| | | ||||||||| ||| ||| |||||||||||||||||||  ||||||| ||  |||||||||    
T  23953910 ttgattgacgtctgacaaattcacggactaagttgatatttcgcataattgatggacgaattttaccgacccgt 23953837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 23955014 - 23955099
Alignment:
Q  20 attattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    ||||||||| |||| |||||  ||||| ||||||||| |  | |||||  ||||||||||||||||||||| | ||||||| ||||    
T  23955014 attattggaggaaatttttgttattttagagtgtagactgaagattgtgtaattagggttccaattttatacaattggggaagaaa 23955099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 36756595 - 36756680
Alignment:
Q  20 attattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    ||||||||| |||| ||  | |||||| ||||||||||| || |||||  |||||||||| |||||||||| | ||||||| ||||    
T  36756595 attattggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattagggtttcaattttatacaattggggaagaaa 36756680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 36762392 - 36762477
Alignment:
Q  20 attattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    ||||||||| |||| ||  | |||||| ||||||||||| || |||||  |||||||||| |||||||||| | ||||||| ||||    
T  36762392 attattggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattagggtttcaattttatacaattggggaagaaa 36762477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 19 - 281
Target Start/End: Original strand, 39190532 - 39190795
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  | |||||||    
T  39190532 aattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaatagtcgttggaga 39190631  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||    
T  39190632 aggaagagagccgttggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaatttaggtcattatcggccaaattagtccctgcctac 39190731  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaactga 281  Q
    ||||||||||| ||||||||||||||||||||||||| |||||| |||| ||||||||||||||    
T  39190732 gtggcgtctgacatgtgagaggttaacggccacgtcaaccccgttaacgctccgtttgaactga 39190795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 19 - 281
Target Start/End: Original strand, 39084865 - 39085128
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  | |||||||    
T  39084865 aattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagagttccaattttatatatttggggaagaaatagtcgttggaga 39084964  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
    ||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||    
T  39084965 aggaagagagccgttggggaagaagagcaatttcctgtaattcaatcaacttagtccttgaaaatttaggtcattatcggccaaattagtccctgcctac 39085064  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaactga 281  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  39085065 gtggcgtctgacatgtgagaggttaacggccacgtcagccccgttaacgctccgtttgaactga 39085128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 19 - 278
Target Start/End: Original strand, 39922720 - 39922980
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  | |||||||    
T  39922720 aattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaatagtcgttggaga 39922819  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||| ||||    
T  39922820 aggaagagagccgttggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaatttaggtcattatcggctaaattagtctctgcctac 39922919  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    ||||||||||| | |||||||||||||||||||||||||||||| |||  |||||||||||    
T  39922920 gtggcgtctgacaggtgagaggttaacggccacgtcagccccgttaacactccgtttgaac 39922980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 19 - 281
Target Start/End: Complemental strand, 44993186 - 44992923
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||  | | |||||    
T  44993186 aattattggaagaaaatttgaagattttggagtgtagattacacattgtaaaattaggattccaattttatatatttggggaagaaatagtcgtaggaga 44993087  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  44993086 aggaagagagccgttggggaagaaaagcaatttcctgaaattcaatcaacttagtccttgaaaatttaggtcattatcggccaaattagtctctgcctac 44992987  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaactga 281  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  44992986 gtggcgtctgacatgtgagaggttaacggccacgtcagccccgttaacgctccgtttgaactga 44992923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 19 - 281
Target Start/End: Complemental strand, 43778767 - 43778504
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  | |||||||    
T  43778767 aattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggcgaagaaatagtcgttggaga 43778668  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
    |||||||  ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||  ||||    
T  43778667 aggaagagggccgttgaggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaatttaggtcattatcggccaaattagtccctacctac 43778568  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaactga 281  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43778567 gtggcatctgacatgtgagaggttaacggccacgtcagccccgttaacgttccgtttgaactga 43778504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 19 - 281
Target Start/End: Original strand, 5485765 - 5486028
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||  | |||||||    
T  5485765 aattattggaagaaaatttggagattttggagtgtagattacacatggtaaaattagggttccaattttatatatttggggaagaaatagtcgttggaga 5485864  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
    ||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||    
T  5485865 aggaagagaaccgttggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaatttaggtcattatcggccaaattagtccctgcctac 5485964  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaactga 281  Q
    ||| | ||||| ||||||||||||||||| |||||||||||||| |||| ||||||||||||||    
T  5485965 gtgacatctgacatgtgagaggttaacggtcacgtcagccccgttaacgctccgtttgaactga 5486028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 19 - 263
Target Start/End: Complemental strand, 42879662 - 42879417
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  | ||||| |    
T  42879662 aattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaatagtcgttggaca 42879563  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||    
T  42879562 aggaagagagccgttggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaatttaggtcattatcggccaaattagtccctgcctac 42879463  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacgtcagccccgtca 263  Q
    ||||||||||| |||||||||||||||||||||||| ||| |||||    
T  42879462 gtggcgtctgacatgtgagaggttaacggccacgtcggccacgtca 42879417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 32653344 - 32653587
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||| || |||||||    
T  32653344 aattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagagtttcaattttatatattttgggaagaaatagccgttggaga 32653443  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||  ||  |||    
T  32653444 aggaagagagccgttggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaatttaggtcattatcggccaacttagtccttgcttac 32653543  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacgtcagccccgt 261  Q
    ||||| ||||| |||||||||||||||| |||||||||| ||||    
T  32653544 gtggcatctgacatgtgagaggttaacgaccacgtcagcaccgt 32653587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 44992971 - 44992840
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44992971 tgagaggttaacggccacgtcagccccgttaacgctccgtttgaactgaaggactaacttgattgacatttaacaaactcagggattaaattgatatttc 44992872  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| ||||||||||||||||||||||    
T  44992871 gcataattgagggacgaagttggccgacccgt 44992840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 279 - 410
Target Start/End: Original strand, 39085080 - 39085211
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39085080 tgagaggttaacggccacgtcagccccgttaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcatggattaaattgatatttc 39085179  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| |||||||||||| |||||||||    
T  39085180 gcataattgagggacgaagttgaccgacccgt 39085211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 279 - 407
Target Start/End: Original strand, 39922935 - 39923063
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||| |||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39922935 tgagaggttaacggccacgtcagccccgttaacactccgtttgaaccgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 39923034  T
Q  379 gcataattgtgggacgaagttggccgacc 407  Q
    ||||||||| |||||||||||||||||||    
T  39923035 gcataattgagggacgaagttggccgacc 39923063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 43778552 - 43778421
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43778552 tgagaggttaacggccacgtcagccccgttaacgttccgtttgaactgaaggactaacttgattgacatttaacaaatttagggattaaattgatatttc 43778453  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| |||||||||||| |||||||||    
T  43778452 gcataattgagggacgaagttgaccgacccgt 43778421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 279 - 400
Target Start/End: Original strand, 39190747 - 39190868
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39190747 tgagaggttaacggccacgtcaaccccgttaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcacggattaaattgatatttc 39190846  T
Q  379 gcataattgtgggacgaagttg 400  Q
    ||||||||| ||||||||||||    
T  39190847 gcataattgagggacgaagttg 39190868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 294 - 410
Target Start/End: Complemental strand, 42879423 - 42879307
Alignment:
Q  294 cacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggac 393  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  42879423 cacgtcagccccgttaacgctccgtttgaactgaaggactgacttgattgacatttaacaaattcatggattaaattgatatttcgcataattgagggac 42879324  T
Q  394 gaagttggccgacccgt 410  Q
    |||||||||||||||||    
T  42879323 gaagttggccgacccgt 42879307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 84 - 261
Target Start/End: Original strand, 15450194 - 15450372
Alignment:
Q  84 ttttatatatttggggatgaaataacctttggagaaggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa- 182  Q
    |||||||||||||||||  |||||  | |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  15450194 ttttatatatttggggaataaatagtccttggagaaggaagagagccgttggggaagaagagcaatttcctgaaattcaatcaacttagtccatgaaaat 15450293  T
Q  183 ttaggtcattatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgt 261  Q
    ||||||||||||| ||||| ||| |  |||  |||||||| ||| | |||||||||||||||| |||||||||| ||||    
T  15450294 ttaggtcattatccgccaacttagttcctgcttacgtggcatctaaaatgtgagaggttaacgaccacgtcagcaccgt 15450372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 279 - 386
Target Start/End: Original strand, 27626656 - 27626763
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    ||||||| |||||||||||||||| |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27626656 tgagaggctaacggtcacgtcagccccgttaacgctccgtttgaacagaagtactaacttgattgacatttaacaaattcagggattaaattgatatttc 27626755  T
Q  379 gcataatt 386  Q
    ||||||||    
T  27626756 gcataatt 27626763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 279 - 408
Target Start/End: Original strand, 2828339 - 2828468
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||  |||||||||  ||| ||| ||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2828339 tgagaggttaacgaccacgtcagcctcgttaacactcagtttgaacagaaggactaacttgattgacatttaacaaattcaaggattaaattgatatttc 2828438  T
Q  379 gcataattgtgggacgaagttggccgaccc 408  Q
    ||||||||| ||||| ||||||||||||||    
T  2828439 gcataattgagggacaaagttggccgaccc 2828468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 44793095 - 44792966
Alignment:
Q  281 agaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgc 380  Q
    |||||||||||| ||||||||| |||| ||||  |||||||| | |||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  44793095 agaggttaacggccacgtcagccccgttaacggcccgtttgaccagaaggactaaattgattgacaattaacaaattcagggattaaattgatatttcgc 44792996  T
Q  381 ataattgtgggacgaagttggccgacccgt 410  Q
    ||||||| |||||||| |||||||||||||    
T  44792995 ataattgagggacgaatttggccgacccgt 44792966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 51040898 - 51040767
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    ||||||||||| |||||||||||| |||| || |||||||||||||  ||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  51040898 tgagaggttaatggtcacgtcagccccgttaatgctccgtttgaacaaaaggactgacttgattgacatttaacaaattcagggattgaattgatatttc 51040799  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    |||||||||  ||| ||| |||||||||||||    
T  51040798 gcataattgaaggatgaatttggccgacccgt 51040767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 279 - 408
Target Start/End: Original strand, 5485980 - 5486109
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  5485980 tgagaggttaacggtcacgtcagccccgttaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggactattttgatatttc 5486079  T
Q  379 gcataattgtgggacgaagttggccgaccc 408  Q
    |   ||||  |||| ||| |||||||||||    
T  5486080 gttaaatttagggatgaatttggccgaccc 5486109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 35997697 - 35997826
Alignment:
Q  281 agaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgc 380  Q
    |||||||||||  ||||||||| |||| || ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||      
T  35997697 agaggttaacgaccacgtcagccccgttaatgctccgtttgaacagaaggactaaattgattgacaattaacaaattcagggattaaattgatatttctt 35997796  T
Q  381 ataattgtgggacgaagttggccgacccgt 410  Q
    ||||||| || ||||| |||||||||||||    
T  35997797 ataattgaggaacgaatttggccgacccgt 35997826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 281 - 406
Target Start/End: Complemental strand, 10371218 - 10371093
Alignment:
Q  281 agaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgc 380  Q
    |||||||||||| ||||||||| |||| ||||  |||||||| | |||||||||| |||||||||| ||||||||||||||||| |||||||||||||||    
T  10371218 agaggttaacggccacgtcagccccgttaacgggccgtttgaccagaaggactaaattgattgacaattaacaaattcagggatgaaattgatatttcgc 10371119  T
Q  381 ataattgtgggacgaagttggccgac 406  Q
    ||||||| ||||| || || ||||||    
T  10371118 ataattgagggactaatttagccgac 10371093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 47942676 - 47942805
Alignment:
Q  281 agaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgc 380  Q
    |||||||||||| ||||||||| |||| ||||  |||||||| | ||| || ||| |||||||||| |||||||||||| ||||||||||||||||||||    
T  47942676 agaggttaacggccacgtcagccccgttaacggcccgtttgatcagaatgattaaattgattgacaattaacaaattcaaggattaaattgatatttcgc 47942775  T
Q  381 ataattgtgggacgaagttggccgacccgt 410  Q
    ||||||| |||||||| ||| |||||||||    
T  47942776 ataattgagggacgaatttgaccgacccgt 47942805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 279 - 406
Target Start/End: Original strand, 4520379 - 4520506
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    ||||| ||||| || ||| | ||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||| | | ||| ||||||||||    
T  4520379 tgagatgttaaaggccacattagctccgttaacgctccgtttgaacagaaggactaacttgattgacatttaacaaattcaagaactaagttgatatttc 4520478  T
Q  379 gcataattgtgggacgaagttggccgac 406  Q
    |||||||||  ||| ||| |||||||||    
T  4520479 gcataattgatggatgaatttggccgac 4520506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 281 - 406
Target Start/End: Original strand, 10767880 - 10768005
Alignment:
Q  281 agaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgc 380  Q
    |||||||||||| ||||||||| |||| || |  |||||||| | |||||||||| |||||||||| ||||||||||||||||| ||| ||| |||||||    
T  10767880 agaggttaacggccacgtcagccccgttaatggcccgtttgaccagaaggactaaattgattgacaattaacaaattcagggatgaaaatgaaatttcgc 10767979  T
Q  381 ataattgtgggacgaagttggccgac 406  Q
    ||||||| ||||| || |||||||||    
T  10767980 ataattgagggactaatttggccgac 10768005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 279 - 386
Target Start/End: Original strand, 43823498 - 43823604
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    ||||||||||||||||||||||||||||| ||||| ||| |||||| ||| |||||||||||||||||||| ||||||| |  |||||||||| ||||||    
T  43823498 tgagaggttaacggtcacgtcagcaccgttaacgc-ccgattgaacagaatgactaacttgattgacatttgacaaatttaaagattaaattgttatttc 43823596  T
Q  379 gcataatt 386  Q
    ||| ||||    
T  43823597 gcacaatt 43823604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 315 - 410
Target Start/End: Complemental strand, 44556747 - 44556652
Alignment:
Q  315 ccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    |||||| ||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||| ||||| || ||| |||||||||    
T  44556747 ccgtttaaacagaaggactaacttgattgacatttaacaaattcatggactaaattgatatttcacataattgagggactaatttgaccgacccgt 44556652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 230826 - 230729
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttgga 116  Q
    ||||||||||||||| ||| | || |||||||||||||||||| |||||||||||||| | |||||||||||||||||| || |||||| || |||||    
T  230826 aattattggaagaaattttggggactttggagtgtagattacagattgtaaaattaggatgccaattttatatatttggagaagaaatagccgttgga 230729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 160 - 278
Target Start/End: Original strand, 2828265 - 2828384
Alignment:
Q  160 tcaatcaacttagtccttgaaaat-taggtcattatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccc 258  Q
    |||||||| ||||||||| ||||| |  || |||||||||||||||| || ||| ||||||||||||||| |||||||||||||||| |||||||||||     
T  2828265 tcaatcaatttagtccttcaaaatgtttgttattatcggccaaattagtccctgcctacgtggcgtctgacatgtgagaggttaacgaccacgtcagcct 2828364  T
Q  259 cgtcaacgttccgtttgaac 278  Q
    ||| |||  || ||||||||    
T  2828365 cgttaacactcagtttgaac 2828384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 13438231 - 13438125
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||| ||| |  ||||||||||||| |||| | ||||||||||||||||| | |||||||||||||||||| |||  |||| |||||||    
T  13438231 aattattggaagaaattttgggaattttggagtgtacattaaagattgtaaaattagggtttctattttatatatttggggaagaaggaaccattggaga 13438132  T
Q  119 aggaaga 125  Q
    || ||||    
T  13438131 agaaaga 13438125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 25994822 - 25994897
Alignment:
Q  19 aattattggaagaaaattttga-gattttggagtgtagattacacattgtaaaattagggttccaattttatatatt 94  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  25994822 aattattggaag-aaattttgaggattttggagtgtagattacagattgtaaatttagagttccaattttatatatt 25994897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 35997652 - 35997740
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| || ||| ||||||||||| ||| |||| ||||||||||| ||||||||||||||| || | |||||||||||    
T  35997652 attatcggccaaattagtccctgcctacgtggcgtatgacatgtaagaggttaacgaccacgtcagccccgttaatgctccgtttgaac 35997740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 279 - 386
Target Start/End: Complemental strand, 34460388 - 34460281
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||| | || | ||||| | |||||||  ||| |||||| ||||| |||| |||||||||| |||||||||||||||||||     
T  34460388 tgagaggttaacggccacgtcatcccctttaacgccctgtttgaatagaatgactaaattgatcgacaattaacaaatttagggattaaattgatatttt 34460289  T
Q  379 gcataatt 386  Q
    ||||||||    
T  34460288 gcataatt 34460281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 279 - 405
Target Start/End: Complemental strand, 230599 - 230473
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| |||||||||||||| ||| | |   |||||| || ||||||| ||||| ||||| |  ||||||||| || ||| ||||||||||    
T  230599 tgagaggttaacggccacgtcagcaccgttaacacccaaattgaacagagggactaaattgatcgacatatgccaaattcagagactaatttgatatttc 230500  T
Q  379 gcataattgtgggacgaagttggccga 405  Q
    ||||||||| |||||||  ||||||||    
T  230499 gcataattgagggacgattttggccga 230473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 190 - 276
Target Start/End: Complemental strand, 10371263 - 10371177
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttga 276  Q
    |||||| ||||||||| || ||| ||||||||||| ||| |||| ||||||||||||||||||||||||||| ||||  ||||||||    
T  10371263 attatcagccaaattagtccctgcctacgtggcgtatgacatgtaagaggttaacggccacgtcagccccgttaacgggccgtttga 10371177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 190 - 276
Target Start/End: Original strand, 47942631 - 47942717
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttga 276  Q
    |||||||||||||||| || ||  ||||||||||| ||| |||| ||||||||||||||||||||||||||| ||||  ||||||||    
T  47942631 attatcggccaaattagtccctacctacgtggcgtatgacatgtaagaggttaacggccacgtcagccccgttaacggcccgtttga 47942717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 42 - 254
Target Start/End: Original strand, 13450042 - 13450258
Alignment:
Q  42 attttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggagaaggaag--atagccattggggaa 139  Q
    ||||||||||||| |||| | ||||||||||||||||| |||||||||| |||||| || |||| |||| ||||||||| |||  | || | |||||| |    
T  13450042 attttggagtgtacattaaagattgtaaaattagggtttcaattttatacatttggtgaagaaagaaccattggagaagaaagaaagagtcgttggggga 13450141  T
Q  140 gaagagca-atttcctgaaattcaatcaacttagtcctt-gaaaattaggtcattatcggccaaattaatctctgtctacgtggcgtctgatatgtgaga 237  Q
    | | || | |||| ||| || |||||||| |  |||||| |||| || |||||||||||||||||||| ||  ||  |||||| | ||| | ||||||||    
T  13450142 ggaaagaacattttctgcaaatcaatcaattccgtccttggaaattttggtcattatcggccaaattagtccgtgcttacgtgacatctaacatgtgaga 13450241  T
Q  238 ggttaacggccacgtca 254  Q
    |||||||| | ||||||    
T  13450242 ggttaacgacgacgtca 13450258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 27626613 - 27626701
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| ||  || ||||||| ||||| | |||||||||| |||||| |||||||||||||| |||| |||||||||||    
T  27626613 attatcggccaaattagtccttgcctacgtgacgtctaacatgtgagaggctaacggtcacgtcagccccgttaacgctccgtttgaac 27626701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 282 - 381
Target Start/End: Complemental strand, 2348915 - 2348817
Alignment:
Q  282 gaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgca 381  Q
    ||||||||||| ||||||||| |||| ||||| |||||| | | |||| || || |||||||||| |||||||||||| ||||||| |||||||||||||    
T  2348915 gaggttaacggccacgtcagccccgttaacgccccgtttaagcagaagaaccaaattgattgacaattaacaaattca-ggattaacttgatatttcgca 2348817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 261
Target Start/End: Original strand, 10767835 - 10767906
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgt 261  Q
    |||||| ||||||||| || ||| ||||||||||| ||| |||| |||||||||||||||||||||||||||    
T  10767835 attatcagccaaattagtccctgcctacgtggcgtatgacatgtaagaggttaacggccacgtcagccccgt 10767906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 261
Target Start/End: Complemental strand, 44556815 - 44556744
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgt 261  Q
    |||||||||||||||| || | | ||||||||||||||| ||||||||||||||| || |||||||||||||    
T  44556815 attatcggccaaattagtccccgcctacgtggcgtctgacatgtgagaggttaacagcaacgtcagccccgt 44556744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 44793133 - 44793054
Alignment:
Q  197 gccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttga 276  Q
    ||||||||| || ||| ||||||||||| ||| |||| ||||||||||||||||||||||||||| ||||  ||||||||    
T  44793133 gccaaattagtccctgcctacgtggcgtatgacatgtaagaggttaacggccacgtcagccccgttaacggcccgtttga 44793054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 34460431 - 34460362
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagcccc 259  Q
    |||||||||||||||| || ||| ||| ||||||| ||| ||||||||||||||||||||||||| ||||    
T  34460431 attatcggccaaattagtccctgcctatgtggcgtatgacatgtgagaggttaacggccacgtcatcccc 34460362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 353 - 406
Target Start/End: Original strand, 44794795 - 44794848
Alignment:
Q  353 aaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgac 406  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||| |||||    
T  44794795 aaattcagggattaaattgatatttcgcataattgagggacgaatttgaccgac 44794848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 353 - 410
Target Start/End: Complemental strand, 47941900 - 47941843
Alignment:
Q  353 aaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||||||||||||||||||||||||||||| | |||||| ||| |||||||||    
T  47941900 aaattcagggattaaattgatatttcgcataattgagagacgaatttgaccgacccgt 47941843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 4520336 - 4520424
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||| ||||||||| ||||||  |||||||||||||| |||||||| ||||| |||||| | ||| |||| |||| |||||||||||    
T  4520336 attatcagccaaattagtctctgcttacgtggcgtctgacatgtgagatgttaaaggccacattagctccgttaacgctccgtttgaac 4520424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 353 - 408
Target Start/End: Original strand, 2350542 - 2350597
Alignment:
Q  353 aaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgaccc 408  Q
    |||||||| |||||||||||||||||||||||||| ||||| || |||||||||||    
T  2350542 aaattcagagattaaattgatatttcgcataattgagggacaaatttggccgaccc 2350597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 10372739 - 10372794
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgac 406  Q
    |||||||||||||| |||||||||||||||||||||| ||||| || |||||||||    
T  10372739 acaaattcagggatgaaattgatatttcgcataattgagggactaatttggccgac 10372794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 351 - 410
Target Start/End: Original strand, 44558526 - 44558585
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||||||| ||| ||||||||||||||||||| |||| ||| |||||||||||||    
T  44558526 acaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgt 44558585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 266
Target Start/End: Complemental strand, 2348990 - 2348885
Alignment:
Q  160 tcaatcaacttagtccttgaaaat-taggtcattatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccc 258  Q
    |||||||| ||||||||| ||||| |  || |||||||| ||||||| || ||| ||||||||| | ||| |||||||  ||||||||||||||||||||    
T  2348990 tcaatcaatttagtccttcaaaatatttgttattatcggtcaaattagtccctgcctacgtggcatatgacatgtgag--gttaacggccacgtcagccc 2348893  T
Q  259 cgtcaacg 266  Q
    ||| ||||    
T  2348892 cgttaacg 2348885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 10762672 - 10762617
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgac 406  Q
    |||||||||||||| ||||||| |||||||||||||| ||||| || |||||||||    
T  10762672 acaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgac 10762617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 353 - 408
Target Start/End: Complemental strand, 35996152 - 35996097
Alignment:
Q  353 aaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgaccc 408  Q
    ||||||||||||||||||||||||| ||| ||||| |||||||| ||| |||||||    
T  35996152 aaattcagggattaaattgatattttgcacaattgagggacgaatttgaccgaccc 35996097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 51040940 - 51040853
Alignment:
Q  191 ttatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    ||||||| ||||||| ||  || ||| ||||| ||||| |||||||||||||| || |||||||||||||| || | |||||||||||    
T  51040940 ttatcggacaaattagtccttgcctatgtggcatctgacatgtgagaggttaatggtcacgtcagccccgttaatgctccgtttgaac 51040853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 2691774 - 2691688
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    ||||| ||||||||| ||| ||||||||| | | ||| | ||| ||| ||| ||||||||||||| |||||||||||||||| ||||    
T  2691774 aattaatggaagaaattttggagattttgaactctaggtgacaaattataacattagggttccaaatttatatatttggggaagaaa 2691688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 10544694 - 10544775
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttgggga 100  Q
    ||||| ||||||||| ||| | ||||||||| ||||||  |   |||| ||||||||||||||||||||||| |||||||||    
T  10544694 aattaatggaagaaattttggggattttggactgtagacgagggattgaaaaattagggttccaattttatagatttgggga 10544775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 329 - 405
Target Start/End: Complemental strand, 833336 - 833260
Alignment:
Q  329 ggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    ||||||| |||||||||||||   ||||||||||| ||  ||||||||||| ||||||  |||||||| ||||||||    
T  833336 ggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaaattggccga 833260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 329 - 405
Target Start/End: Original strand, 5439623 - 5439699
Alignment:
Q  329 ggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    ||||||| |||||||||||||   ||||||||||| ||  ||||||||||| ||||||  |||||||| ||||||||    
T  5439623 ggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaaattggccga 5439699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 379
Target Start/End: Original strand, 15450344 - 15450444
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||  |||||||||||||| ||| |||| |||| || || |||| || ||||   |||||| ||||||||||||| ||  ||||||||||    
T  15450344 tgagaggttaacgaccacgtcagcaccgttaaccctccatttggacggagggacaaaattgacgaacattttacaaattcagggactattttgatatttc 15450443  T
Q  379 g 379  Q
    |    
T  15450444 g 15450444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 405
Target Start/End: Complemental strand, 43507272 - 43507204
Alignment:
Q  337 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| ||||  |||||||| ||||||||    
T  43507272 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 43507204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 405
Target Start/End: Original strand, 43508637 - 43508705
Alignment:
Q  337 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| ||||  |||||||| ||||||||    
T  43508637 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 43508705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 319665 - 319623
Alignment:
Q  71 attagggttccaattttatatatttggggatgaaataaccttt 113  Q
    ||||||||||||| |||||||||||||||| |||||| |||||    
T  319665 attagggttccaaatttatatatttggggaagaaatagccttt 319623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 4172504 - 4172462
Alignment:
Q  71 attagggttccaattttatatatttggggatgaaataaccttt 113  Q
    ||||||||||||| |||||||||||||||| |||||| |||||    
T  4172504 attagggttccaaatttatatatttggggaagaaatagccttt 4172462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 33265707 - 33265749
Alignment:
Q  71 attagggttccaattttatatatttggggatgaaataaccttt 113  Q
    ||||||||||||| |||||||||||||||| |||||| |||||    
T  33265707 attagggttccaaatttatatatttggggaagaaatagccttt 33265749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 112
Target Start/End: Complemental strand, 5438203 - 5438162
Alignment:
Q  71 attagggttccaattttatatatttggggatgaaataacctt 112  Q
    ||||||||||||| |||||||||||||||| |||||| ||||    
T  5438203 attagggttccaaatttatatatttggggaagaaatagcctt 5438162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 493 - 534
Target Start/End: Complemental strand, 40561940 - 40561899
Alignment:
Q  493 ggcgcagtggccgaccaccacaaggtggcggcgccgccgccg 534  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||    
T  40561940 ggcgcggtggccggccacctcaaggtggcggcgccgccgccg 40561899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 244 - 281
Target Start/End: Complemental strand, 42879427 - 42879390
Alignment:
Q  244 cggccacgtcagccccgtcaacgttccgtttgaactga 281  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  42879427 cggccacgtcagccccgttaacgctccgtttgaactga 42879390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 19 - 281
Target Start/End: Complemental strand, 37865762 - 37865499
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||    
T  37865762 aattattagaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaatagccgttggaga 37865663  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
    ||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||    
T  37865662 aggaagagagctgttggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaatttaggtcattatcggccaaattagtccctgcctac 37865563  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaactga 281  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  37865562 gtggcgtctgacatgtgagaggttaacggccacgtcagccccgttaacgctccgtttgaactga 37865499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 41945812 - 41946055
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || |||||||    
T  41945812 aattattggaagaaaatttagagattttggagtgtagattacacatcgtaaaattagggttccaattttatatatttggggaagaaatagccattggaga 41945911  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttg-aaaattaggtcattatcggccaaattaatctctgtctac 217  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||  |||    
T  41945912 aggaagagagccgttggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaaattaggtcattatcggccaacttagtctctgcttac 41946011  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacgtcagccccgt 261  Q
    ||||| | ||| |||||||||||||||| |||||||||| ||||    
T  41946012 gtggcatatgacatgtgagaggttaacgaccacgtcagcaccgt 41946055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 279 - 400
Target Start/End: Complemental strand, 37865547 - 37865426
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37865547 tgagaggttaacggccacgtcagccccgttaacgctccgtttgaactgaaagactaacttgattgacatttaacaaattcagggattaaattgatatttc 37865448  T
Q  379 gcataattgtgggacgaagttg 400  Q
    ||||||||| ||||||||||||    
T  37865447 gcataattgagggacgaagttg 37865426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 33851145 - 33851014
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33851145 tgagaggttaacggtcacgtcagccccgttaacgctccgtttgaacagaatgactaacttgattgacatttaacaaattcagagattaaattgatatttc 33851046  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    | ||||||| |||||||||||| |||||||||    
T  33851045 ggataattgagggacgaagttgaccgacccgt 33851014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 45897213 - 45897082
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| |||||||||   || |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  45897213 tgagaggttaacggccacgtcagccttgttaacgctccgtttgaacagaagaactaacttgattgacatttaacaaattcagggattaaattgatatttc 45897114  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| ||||||||||||||||||||||    
T  45897113 gcataattgagggacgaagttggccgacccgt 45897082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 283 - 408
Target Start/End: Complemental strand, 23887357 - 23887232
Alignment:
Q  283 aggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcat 382  Q
    |||||||||| ||||||||| |||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23887357 aggttaacggccacgtcagccccgttaacgctccgtttgaacagaaggactaacttgattgacattgaacaaattcagggattaaattgatatttcgcat 23887258  T
Q  383 aattgtgggacgaagttggccgaccc 408  Q
    ||||| ||||||||||| ||||||||    
T  23887257 aattgagggacgaagttagccgaccc 23887232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 33112004 - 33111873
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||||||||||||| || | |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33112004 tgagaggttaacggtcacgtcagctccattaacgctccgtttgaatagaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 33111905  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| |||| ||| ||| |||| ||||    
T  33111904 gcataattgagggatgaatttgaccgagccgt 33111873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 279 - 410
Target Start/End: Original strand, 1847573 - 1847704
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    ||||| |||||||| ||| ||| | |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  1847573 tgagaagttaacggccacatcatccccgttaacgctccgtttgaacagaaggactaacttgattgacatttaacaaattcagggattaaattgatatttt 1847672  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| |||| ||| |||||||||||||    
T  1847673 gcataattgagggatgaatttggccgacccgt 1847704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 40508656 - 40508525
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||| |||| ||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40508656 tgagaggttaacggccacgtcagccccgttaacgctctgtttgaatagaaggactaacttgattgacatttaacaaattcagggattaaattgagatttc 40508557  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||  |||||||| ||| |||||||||    
T  40508556 gcataattaagggacgaatttgtccgacccgt 40508525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 279 - 410
Target Start/End: Original strand, 48635301 - 48635432
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48635301 tgagaggttaacggccacgtcagccccgttaacgctccgtttgaacagaaagactaacttaattgacatttaacaaattcagggattaaattgatatttc 48635400  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||  |||||||| ||| |||| ||||    
T  48635401 gcataattaagggacgaatttgaccgatccgt 48635432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 18428910 - 18428781
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgttt-gaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatattt 377  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||||  || ||||||||||||||||||||||||||||| | ||||||||||||||||    
T  18428910 tgagaggttaacggtcacgtcagccccgttaacgctccgttttgaac--aatgactaacttgattgacatttaacaaattc-gagattaaattgatattt 18428814  T
Q  378 cgcataattgtgggacgaagttggccgacccgt 410  Q
    |||||||||| |||||||||||| |||||||||    
T  18428813 cgcataattgagggacgaagttgaccgacccgt 18428781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 279 - 375
Target Start/End: Original strand, 23775581 - 23775677
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatat 375  Q
    ||||||||||||||||| |||||| || | ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23775581 tgagaggttaacggtcaagtcagccccattaacgctctgtttgaacagaaggactaacttgattgacatttaacaaattcagggattaaattgatat 23775677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 45255646 - 45255515
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    ||||||||||||||  |||| ||| |||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||     
T  45255646 tgagaggttaacggctacgttagccccgttaacgcttcgtttgaacagaaggactaacttgattgacatttaacaaattcagggattaaagtaatatttt 45255547  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| | || ||||||| |||| ||||    
T  45255546 gcataattgagtgatgaagttgaccgatccgt 45255515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 279 - 392
Target Start/End: Complemental strand, 2975623 - 2975510
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||| |||||| |||| | || | |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2975623 tgagaggttaacggccacgtcaacaccgttaacgtttcggtcgaacagaaggactaacttgattgaaatttaacaaattcagggattaaattgatatttc 2975524  T
Q  379 gcataattgtggga 392  Q
    |||| |||| ||||    
T  2975523 gcatcattgaggga 2975510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 48635258 - 48635346
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| || ||| |||| |||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||    
T  48635258 attatcggccaaattagtccctgcctacatggcgtctgacatgtgagaggttaacggccacgtcagccccgttaacgctccgtttgaac 48635346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 287 - 367
Target Start/End: Complemental strand, 51453958 - 51453878
Alignment:
Q  287 taacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaa 367  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||| | |||||||    
T  51453958 taacggtcacgtcagcaccgttaacgctccgtttgaacagaaggactaacttgattgagatttaacaaatttaaggattaa 51453878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 31885680 - 31885550
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    ||||||||||| || |||||| || |||| ||||||| ||||||||  |||||||||||||||||||||||| |||||||| | | ||||||||||||||    
T  31885680 tgagaggttaatggccacgtcggccccgttaacgctctgtttgaaca-aaggactaacttgattgacatttagcaaattcaagtactaaattgatatttc 31885582  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||  |||| ||| ||| |||||||||    
T  31885581 gcataattaagggatgaatttgaccgacccgt 31885550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 40963098 - 40963187
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataa 108  Q
    |||||||| |||||| ||| |  |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||    
T  40963098 aattattgtaagaaattttgggaattttggagtgtagattaaagattgtaaaattagggttccaattttatatatttggggaagaaataa 40963187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 281 - 406
Target Start/End: Complemental strand, 40998676 - 40998551
Alignment:
Q  281 agaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgc 380  Q
    |||||||||||| ||||||||| |||| || |  |||||||| | |||||||||| |||||||||| ||||||||||||||||| ||| ||| |||||||    
T  40998676 agaggttaacggccacgtcagccccgttaatggcccgtttgaccagaaggactaaattgattgacaattaacaaattcagggatgaaaatgaaatttcgc 40998577  T
Q  381 ataattgtgggacgaagttggccgac 406  Q
    ||||||| ||||| || ||| |||||    
T  40998576 ataattgagggactaatttgaccgac 40998551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 23887404 - 23887316
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||| ||||||| || ||| ||||||||||||||| |||||| ||||||||||||||||||||||||| |||| |||||||||||    
T  23887404 attatcggtcaaattagtccctgcctacgtggcgtctgacatgtgaaaggttaacggccacgtcagccccgttaacgctccgtttgaac 23887316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 24381908 - 24381776
Alignment:
Q  279 tgagaggttaacggtcacgtcagca-ccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaa-attcagggattaaattgatatt 376  Q
    ||||||| |||||  |||||||||  |||| |||||||||||||||| |||||||||||||| |||| |||||| || |||||  |||||||||||||||    
T  24381908 tgagaggctaacgaccacgtcagcgtccgttaacgctccgtttgaacagaaggactaacttg-ttgaaatttaaaaatattcaaagattaaattgatatt 24381810  T
Q  377 tcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||||| |||| ||| |||||||| ||||    
T  24381809 tcgcataattgagggatgaatttggccgatccgt 24381776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 45897256 - 45897168
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| || ||| |||||| |||||||| ||||||||||||||||||||||||||||  || |||| |||||||||||    
T  45897256 attatcggccaaattagtccctgcctacgttgcgtctgacatgtgagaggttaacggccacgtcagccttgttaacgctccgtttgaac 45897168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 33112047 - 33111960
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaa 277  Q
    |||||||||||||||| ||  |||||||||||||||||| ||||||||||||||||| ||||||||| || | |||| ||||||||||    
T  33112047 attatcggccaaattagtccgtgtctacgtggcgtctgacatgtgagaggttaacggtcacgtcagctccattaacgctccgtttgaa 33111960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 40508699 - 40508612
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaa 277  Q
    ||||||| |||||||| || ||| || |||||||||||| |||||||||||||||||||||||||||||||| |||| || |||||||    
T  40508699 attatcgaccaaattagtccctgcctgcgtggcgtctgacatgtgagaggttaacggccacgtcagccccgttaacgctctgtttgaa 40508612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 30501479 - 30501404
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatt 94  Q
    |||||||| |||||| ||| |  |||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  30501479 aattattgaaagaaattttgggaattttggagtgtagattaaagattgtaaaattagggttccaattttatatatt 30501404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 187 - 268
Target Start/End: Complemental strand, 2975669 - 2975588
Alignment:
Q  187 gtcattatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgtt 268  Q
    |||||||||| ||||||||||| ||| |||||||  |||||| ||||||||||||||||||||||||| | |||| ||||||    
T  2975669 gtcattatcgaccaaattaatccctgcctacgtgatgtctgacatgtgagaggttaacggccacgtcaacaccgttaacgtt 2975588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 1847376 - 1847460
Alignment:
Q  21 ttattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    |||||||| |||| ||| | ||||||| ||||||||||||| |||||  ||||||||||||||||||||| ||||||||| ||||    
T  1847376 ttattggatgaaattttggtgattttgaagtgtagattacaaattgtgtaattagggttccaattttatacatttggggaagaaa 1847460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 24381950 - 24381862
Alignment:
Q  191 ttatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagc-cccgtcaacgttccgtttgaac 278  Q
    ||||||||||||| | || ||||||||||||||||||| |||||||||| ||||| ||||||||||  |||| |||| |||||||||||    
T  24381950 ttatcggccaaatcagtcactgtctacgtggcgtctgacatgtgagaggctaacgaccacgtcagcgtccgttaacgctccgtttgaac 24381862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 33851188 - 33851100
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    ||||||| |||||||| || |||  ||||| ||| |||| ||||||||||||||||| |||||||||||||| |||| |||||||||||    
T  33851188 attatcgaccaaattagtccctgcttacgttgcgcctgacatgtgagaggttaacggtcacgtcagccccgttaacgctccgtttgaac 33851100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 23774243 - 23774188
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgac 406  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||    
T  23774243 acaaattcagggactaaattgatatttcgcataattgagggacgaatttggccgac 23774188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 351 - 410
Target Start/End: Original strand, 40508944 - 40509003
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||    
T  40508944 acaaattcaaggattaagttgatatttcgcataattgagggacgaatttggccgacccgt 40509003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 261
Target Start/End: Complemental strand, 40998721 - 40998650
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgt 261  Q
    |||||| ||||||||| || ||| ||||||||||| ||| |||| |||||||||||||||||||||||||||    
T  40998721 attatcagccaaattagtccctgcctacgtggcgtatgacatgtaagaggttaacggccacgtcagccccgt 40998650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 278
Target Start/End: Complemental strand, 45255720 - 45255601
Alignment:
Q  160 tcaatcaacttagtccttgaaaat-taggtcattatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccc 258  Q
    |||||||| ||||||||| ||||| |  || |||||||| ||||||| || ||  |||||||||| |||| |||||||||||||||||| |||| |||||    
T  45255720 tcaatcaatttagtccttcaaaatgtttgttattatcggtcaaattagtccctacctacgtggcgcctgacatgtgagaggttaacggctacgttagccc 45255621  T
Q  259 cgtcaacgttccgtttgaac 278  Q
    ||| |||| | |||||||||    
T  45255620 cgttaacgcttcgtttgaac 45255601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 26448126 - 26448041
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    ||||||||||||||| ||| | | ||||||||| ||||| | | |||||||||||| ||||||||||||||||||||| ||||||||    
T  26448126 aattattggaagaaattttaggg-ttttggagtatagataaaatattgtaaaattaaggttccaattttatatatttgaggatgaaa 26448041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 337 - 406
Target Start/End: Original strand, 23888791 - 23888860
Alignment:
Q  337 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgac 406  Q
    ||||| ||| ||| ||||||||||||| |||  |||||||||||||||||| ||||||||||||||||||    
T  23888791 ttgatggacgtttgacaaattcagggactaagctgatatttcgcataattgagggacgaagttggccgac 23888860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 279 - 404
Target Start/End: Complemental strand, 30501280 - 30501155
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||| || ||||||||||||||||||| ||| ||||  ||| || || ||||||| ||||||||||||| ||||||||||  | ||  ||||||||||    
T  30501280 tgagagattgacggtcacgtcagcaccgttaacactccaattggacggagggactaaattgattgacattttacaaattcagaaactattttgatatttc 30501181  T
Q  379 gcataattgtgggacgaagttggccg 404  Q
    |   ||||| |||||||| |||||||    
T  30501180 gttaaattgggggacgaatttggccg 30501155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 49494869 - 49494788
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttgggga 100  Q
    ||||||||||||||  ||| |  |||||||||||| |||||   |||||||||||||||||||||||||||| |||||||||    
T  49494869 aattattggaagaatttttgggaattttggagtgtggattaatgattgtaaaattagggttccaattttatacatttgggga 49494788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 18428929 - 18428869
Alignment:
Q  214 ctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgttt 274  Q
    |||||||||| |||| ||||||||||||||||| |||||||||||||| |||| |||||||    
T  18428929 ctacgtggcgcctgacatgtgagaggttaacggtcacgtcagccccgttaacgctccgttt 18428869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 32842809 - 32842718
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacc 110  Q
    ||||| ||||||||| ||| |  |||||||| ||||||||| | |||| ||||||||||||||||||||||| ||||| ||| |||| ||||    
T  32842809 aattaatggaagaaattttgggaattttggattgtagattagagattgaaaaattagggttccaattttatagatttgaggaagaaagaacc 32842718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 337 - 403
Target Start/End: Complemental strand, 53092728 - 53092662
Alignment:
Q  337 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggcc 403  Q
    ||||||||||||| | ||||||||||||||| ||||||||||||| ||||  |||||||| ||||||    
T  53092728 ttgattgacattttataaattcagggattaatttgatatttcgcaaaattcagggacgaaattggcc 53092662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 2975838 - 2975753
Alignment:
Q  20 attattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    |||||||||||||| ||| | |||||||||||||||| |  | |||||  |||||  |||||||||||||||||||||||| ||||    
T  2975838 attattggaagaaattttggtgattttggagtgtagaatgaagattgtgtaattaaagttccaattttatatatttggggaagaaa 2975753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 278
Target Start/End: Original strand, 23775546 - 23775626
Alignment:
Q  198 ccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||| || ||| ||||||||||||||| || |||||||||||||| || ||||||||| | |||| || ||||||||    
T  23775546 ccaaattagtccctgcctacgtggcgtctgacatatgagaggttaacggtcaagtcagccccattaacgctctgtttgaac 23775626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 31885699 - 31885635
Alignment:
Q  214 ctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    ||||||||||||||| | |||||||||||| ||||||||| ||||||| |||| || ||||||||    
T  31885699 ctacgtggcgtctgacacgtgagaggttaatggccacgtcggccccgttaacgctctgtttgaac 31885635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 33051167 - 33051255
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaata 107  Q
    |||||||||||||   ||| || |||||||||||| ||||| | |||||| ||||| |||||| |||||||| ||||||||| ||||||    
T  33051167 aattattggaagattttttggaaattttggagtgtggattaaatattgtataattatggttcctattttatacatttggggaagaaata 33051255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 49494591 - 49494539
Alignment:
Q  327 aaggactaacttgattgacatttaacaaattcagggattaaattgatatttcg 379  Q
    |||||| || ||||||||||||| |||||||||||||| ||||||||||||||    
T  49494591 aaggacaaaattgattgacattttacaaattcagggatgaaattgatatttcg 49494539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 41021036 - 41021091
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgac 406  Q
    |||||||||||||| ||||||| |||||||||||||| ||||| || |||||||||    
T  41021036 acaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgac 41021091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 351 - 410
Target Start/End: Complemental strand, 48633968 - 48633909
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||||||| ||| |||||||||||||||||||  ||||||| ||| |||||||||    
T  48633968 acaaattcagggactaagttgatatttcgcataattgatggacgaatttgaccgacccgt 48633909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 330 - 395
Target Start/End: Original strand, 33051444 - 33051509
Alignment:
Q  330 gactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacga 395  Q
    |||||| ||||||||||||| |||||||||||||  |||||||||||| ||| ||||  |||||||    
T  33051444 gactaaattgattgacattttacaaattcagggacgaaattgatattttgcaaaatttagggacga 33051509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 1847562 - 1847618
Alignment:
Q  222 cgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    ||||||| |||||||| |||||||||||| ||| |||||| |||| |||||||||||    
T  1847562 cgtctgacatgtgagaagttaacggccacatcatccccgttaacgctccgtttgaac 1847618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 405
Target Start/End: Original strand, 38193494 - 38193562
Alignment:
Q  337 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| ||||  |||||||| ||||||||    
T  38193494 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 38193562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 379
Target Start/End: Original strand, 41946027 - 41946127
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||  |||||||||||||| ||| |||| |||| || || |||| || ||||  ||||||| ||||||||| ||| ||  ||||||||||    
T  41946027 tgagaggttaacgaccacgtcagcaccgttaaccctccatttggacggagggacaaaattgacggacattttacaaattcatggactattttgatatttc 41946126  T
Q  379 g 379  Q
    |    
T  41946127 g 41946127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 405
Target Start/End: Complemental strand, 46308912 - 46308844
Alignment:
Q  337 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| ||||  |||||||| ||||||||    
T  46308912 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 46308844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 405
Target Start/End: Original strand, 53094257 - 53094325
Alignment:
Q  337 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| ||||  |||||||| ||||||||    
T  53094257 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 53094325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 355 - 410
Target Start/End: Original strand, 18430308 - 18430363
Alignment:
Q  355 attcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| ||| ||||||||||||||||||| |||| ||| ||||| |||||||    
T  18430308 attcagggactaagttgatatttcgcataattgagggatgaatttggctgacccgt 18430363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 410
Target Start/End: Original strand, 33113213 - 33113272
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||| ||||| ||| ||||||||||||||||||| |||| ||  |||||||||||||    
T  33113213 acaaatttagggactaagttgatatttcgcataattgagggatgattttggccgacccgt 33113272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 337 - 396
Target Start/End: Original strand, 46611287 - 46611346
Alignment:
Q  337 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaa 396  Q
    ||||||||||||| | ||||||||||| ||| ||||||||||||| ||||  ||||||||    
T  46611287 ttgattgacattttataaattcagggactaatttgatatttcgcaaaattcagggacgaa 46611346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 31885897 - 31885827
Alignment:
Q  20 attattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttata 90  Q
    ||||||||| |||| ||| | |||||| ||||||||||| || |||||  |||||| ||||||||||||||    
T  31885897 attattggaggaaattttggtgattttagagtgtagattgcagattgtgtaattagagttccaattttata 31885827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 337 - 387
Target Start/End: Original strand, 31887471 - 31887521
Alignment:
Q  337 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattg 387  Q
    ||||| ||||| | ||||||||||||| ||| |||||||||||||||||||    
T  31887471 ttgatagacatctgacaaattcagggactaagttgatatttcgcataattg 31887521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 337 - 403
Target Start/End: Complemental strand, 38192000 - 38191934
Alignment:
Q  337 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggcc 403  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| ||||  |||||||| ||||||    
T  38192000 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggcc 38191934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 38192275 - 38192233
Alignment:
Q  71 attagggttccaattttatatatttggggatgaaataaccttt 113  Q
    ||||||||| ||| |||||||||||||||| ||||||||||||    
T  38192275 attagggtttcaaatttatatatttggggaagaaataaccttt 38192233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 46310133 - 46310175
Alignment:
Q  71 attagggttccaattttatatatttggggatgaaataaccttt 113  Q
    ||||||||||||| |||||||||||||||| |||||| |||||    
T  46310133 attagggttccaaatttatatatttggggaagaaatagccttt 46310175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 46609541 - 46609499
Alignment:
Q  71 attagggttccaattttatatatttggggatgaaataaccttt 113  Q
    ||||||||||||| |||||||||||||||| |||||| |||||    
T  46609541 attagggttccaaatttatatatttggggaagaaatagccttt 46609499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 279 - 364
Target Start/End: Original strand, 5127375 - 5127460
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggat 364  Q
    |||||||||||||| ||||||| |||||| ||||| ||   || ||  ||||||||| |||||||| || | ||||||||||||||    
T  5127375 tgagaggttaacggccacgtcatcaccgttaacgccccaaatggacgtaaggactaatttgattgagatatgacaaattcagggat 5127460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 19 - 281
Target Start/End: Complemental strand, 11021911 - 11021648
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||    
T  11021911 aattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaatagccgttggaga 11021812  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
    ||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  11021811 aggaagagagccgttggggaagaagagctatttcctgaaattcaatcaacttagtccttgaaaatttaggtcattatcggccaaattagtctctgcctac 11021712  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaactga 281  Q
    || |||||||| ||||||||| |||||||||||||||||||||| |||| ||||||||||||||    
T  11021711 gttgcgtctgacatgtgagagtttaacggccacgtcagccccgttaacgctccgtttgaactga 11021648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 19 - 281
Target Start/End: Original strand, 28247888 - 28248151
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  | |||||||    
T  28247888 aattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaatagtcgttggaga 28247987  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||    
T  28247988 aggaagagagccgttggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaatttaggtcattatcggccaaattagtccctgcctac 28248087  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaactga 281  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  28248088 gtggcgtctgacatgtgagaggttaacggccacgtcagccccgttaacgctccatttgaactga 28248151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 11021696 - 11021565
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||| ||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11021696 tgagagtttaacggccacgtcagccccgttaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 11021597  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| ||||||||||||||||||||||    
T  11021596 gcataattgagggacgaagttggccgacccgt 11021565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 279 - 410
Target Start/End: Original strand, 28248103 - 28248234
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||| |||| |||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  28248103 tgagaggttaacggccacgtcagccccgttaacgctccatttgaactgaatgcctaacttgattgacatttaacaaattcagggattaaattgatatttc 28248202  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| ||||||||||||||||||||||    
T  28248203 gcataattgagggacgaagttggccgacccgt 28248234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 283 - 410
Target Start/End: Complemental strand, 33352 - 33225
Alignment:
Q  283 aggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcat 382  Q
    |||||||||| ||||||||| |||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  33352 aggttaacggccacgtcagccccgttaacgctccgtttgaacaaaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcacat 33253  T
Q  383 aattgtgggacgaagttggccgacccgt 410  Q
    |||||  |||||||||||||||||||||    
T  33252 aattgaaggacgaagttggccgacccgt 33225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 38149750 - 38149971
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||                  
T  38149750 aattattggaagaaaatttggagattttagagtgtagattacacattgtaaaattagggttccaattttatatatttgggaaagaa-------------- 38149835  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
          |||| | ||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| ||| || |||  |||    
T  38149836 ------atagacgttggggaagaagagcaatttcctgaaattcaatcaact--gtccttgaaaatttaggtcattatcggccaacttagtccctgcttac 38149927  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacgtcagccccgt 261  Q
    ||| | ||||| |||||||||||||||| |||||||||| ||||    
T  38149928 gtgacatctgacatgtgagaggttaacgaccacgtcagcaccgt 38149971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 41708360 - 41708489
Alignment:
Q  281 agaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgc 380  Q
    |||||||||||| ||||||||| |||| ||||  |||||||| | |||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  41708360 agaggttaacggccacgtcagccccgttaacggcccgtttgaccagaaggactaaattgattgacaattaacaaattcagggattaaattgatatttcgc 41708459  T
Q  381 ataattgtgggacgaagttggccgacccgt 410  Q
    ||||||| |||||||| |||||||||||||    
T  41708460 ataattgagggacgaatttggccgacccgt 41708489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 279 - 387
Target Start/End: Original strand, 42003418 - 42003526
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||||||||||||| | || |||||||||| ||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42003418 tgagaggttaacggtcacgtcagccctgttaacgctccgtgtgaacagaatgactaacttgattgacatttaacaaattcagagattaaattgatatttc 42003517  T
Q  379 gcataattg 387  Q
    |||||||||    
T  42003518 gcataattg 42003526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 41072 - 41201
Alignment:
Q  281 agaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgc 380  Q
    |||||||||||| ||||||||| |||| ||||  || ||| ||| |||||||||| |||||||||| |||| ||||||||||||||||||||||||||||    
T  41072 agaggttaacggccacgtcagccccgttaacggcccatttcaacagaaggactaaattgattgacaattaataaattcagggattaaattgatatttcgc 41171  T
Q  381 ataattgtgggacgaagttggccgacccgt 410  Q
    ||||||| |||||||| |||||||||||||    
T  41172 ataattgagggacgaatttggccgacccgt 41201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 279 - 410
Target Start/End: Original strand, 42880739 - 42880870
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||| |||||  ||| ||||||||||||||||  |||||||||||||||||| |||||||||||| | ||||||||||||||||||    
T  42880739 tgagaggttaacggccacatcagcctcgttaacgctccgtttgaacaaaaggactaacttgattgaaatttaacaaatttatggattaaattgatatttc 42880838  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||  |||||||| ||| |||||||||    
T  42880839 gcataattaagggacgaatttgaccgacccgt 42880870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 279 - 410
Target Start/End: Original strand, 37418697 - 37418828
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| || ||||||  ||| ||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||| ||||||||||     
T  37418697 tgagaggttaacggccatgtcagccacgttaacgctctgtttgaacagaatgactaacttgattgacatttaacaaatttagggattagattgatatttt 37418796  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||   ||||||| |||||||||||||    
T  37418797 gcataattaaaggacgaatttggccgacccgt 37418828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 363399 - 363487
Alignment:
Q  19 aattattggaagaaaattttga-gattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaata 107  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  363399 aattattggaag-aaattttgaggattttggagtgtagattacatattgtaaaattagggttccaattttatatatttggggaagaaata 363487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 281 - 407
Target Start/End: Original strand, 15373818 - 15373944
Alignment:
Q  281 agaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgc 380  Q
    |||||||||||| |||| ||||  ||| ||||  | |||||| | |||||||||| |||||||||| |||||||||||||| ||||||||||||||||||    
T  15373818 agaggttaacggccacgccagcctcgttaacggcctgtttgaccagaaggactaaattgattgacaattaacaaattcaggaattaaattgatatttcgc 15373917  T
Q  381 ataattgtgggacgaagttggccgacc 407  Q
    ||||||| || ||||| ||||||||||    
T  15373918 ataattgaggaacgaatttggccgacc 15373944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 193 - 278
Target Start/End: Original strand, 42880699 - 42880784
Alignment:
Q  193 atcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    ||||||||||||| || ||| ||||||||||||||| ||||||||||||||||||||| |||||| ||| |||| |||||||||||    
T  42880699 atcggccaaattagtccctgcctacgtggcgtctgacatgtgagaggttaacggccacatcagcctcgttaacgctccgtttgaac 42880784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 353 - 410
Target Start/End: Complemental strand, 39645 - 39588
Alignment:
Q  353 aaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  39645 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgt 39588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 11313191 - 11313124
Alignment:
Q  41 gattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataa 108  Q
    |||||||||||||| |||| | |||||||||||||||||| ||||||||||||||||||| |||||||    
T  11313191 gattttggagtgtacattaaagattgtaaaattagggttctaattttatatatttggggaagaaataa 11313124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 190 - 276
Target Start/End: Original strand, 41708315 - 41708401
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttga 276  Q
    ||||||||| |||||| || ||| ||||||||||| ||| |||| ||||||||||||||||||||||||||| ||||  ||||||||    
T  41708315 attatcggctaaattagtccctgcctacgtggcgtatgacatgtaagaggttaacggccacgtcagccccgttaacggcccgtttga 41708401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 353 - 410
Target Start/End: Complemental strand, 41706628 - 41706571
Alignment:
Q  353 aaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||    
T  41706628 aaattcagggattaaattgatatttcgcataattgagggacgaatttgaccgacccgt 41706571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 2359467 - 2359394
Alignment:
Q  32 aaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    |||||||| ||||||||| | ||||| ||| ||||||||||||||||| |||||||||| ||||||||| ||||    
T  2359467 aaattttgggattttggactctagatgacaaattgtaaaattagggtttcaattttatagatttggggaagaaa 2359394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 353 - 410
Target Start/End: Complemental strand, 15372588 - 15372531
Alignment:
Q  353 aaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||| |||||||||||||    
T  15372588 aaattcagggattaaattgatattttgcataattgaggggcgaatttggccgacccgt 15372531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 7744976 - 7745064
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaata 107  Q
    ||||||||||||||  ||| |  |||||||||||| ||||| | ||||||||||||||||| |||||||||| ||||||| | ||||||    
T  7744976 aattattggaagaatttttgggaattttggagtgtggattaaagattgtaaaattagggtttcaattttatacatttgggaaagaaata 7745064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 10715455 - 10715407
Alignment:
Q  52 gtagattacacattgtaaaattagggttccaattttatatatttgggga 100  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||    
T  10715455 gtagattaaagattgtaaaattagggttccaattttatatatttgggga 10715407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 37418654 - 37418742
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    ||||||| |||||||| || ||| |||| || ||||||| |||||||||||||||||||| ||||||| ||| |||| || ||||||||    
T  37418654 attatcgaccaaattagtccctgcctacatgccgtctgacatgtgagaggttaacggccatgtcagccacgttaacgctctgtttgaac 37418742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 42003379 - 42003463
Alignment:
Q  194 tcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||| ||  || |||||| |||||||| ||||||||||||||||| ||||||||||| || |||| ||||| |||||    
T  42003379 tcggccaaattagtccatgcctacgtagcgtctgacatgtgagaggttaacggtcacgtcagccctgttaacgctccgtgtgaac 42003463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 17948645 - 17948724
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggg 98  Q
    ||||||||||||||  ||| |  |||||||||||| ||||| | ||||||||||||||||| |||||||||| |||||||    
T  17948645 aattattggaagaatttttgggaattttggagtgtggattaaagattgtaaaattagggtttcaattttatacatttggg 17948724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 29909693 - 29909748
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgac 406  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  29909693 acaaattaagggactaaattgatatttcgcataattgagggacaaagttggccgac 29909748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 351 - 408
Target Start/End: Complemental strand, 37417364 - 37417307
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgaccc 408  Q
    ||||||||||||| ||| ||||||||||||||||||| |||| ||| |||||||||||    
T  37417364 acaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgaccc 37417307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 266
Target Start/End: Original strand, 15373773 - 15373849
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacg 266  Q
    |||||| ||||||||| || ||| ||||||||||| ||| |||| ||||||||||||||||| ||||| ||| ||||    
T  15373773 attatcagccaaattagtccctgcctacgtggcgtatgacatgtaagaggttaacggccacgccagcctcgttaacg 15373849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 266
Target Start/End: Original strand, 40997 - 41103
Alignment:
Q  160 tcaatcaacttagtccttgaaaat-taggtcattatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccc 258  Q
    |||||||| ||||||||| ||||| |  || |||||||||||||||| || ||| | ||||| ||| |||  ||| ||||||||||||||||||||||||    
T  40997 tcaatcaatttagtccttcaaaatgtttgttattatcggccaaattagtccctgcc-acgtgacgtatgacttgtaagaggttaacggccacgtcagccc 41095  T
Q  259 cgtcaacg 266  Q
    ||| ||||    
T  41096 cgttaacg 41103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Complemental strand, 33352 - 33311
Alignment:
Q  237 aggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    ||||||||||||||||||||||||| |||| |||||||||||    
T  33352 aggttaacggccacgtcagccccgttaacgctccgtttgaac 33311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 351 - 408
Target Start/End: Complemental strand, 15432419 - 15432362
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgaccc 408  Q
    |||||||||| || ||||||||||||||||||||||| |||| ||| ||| |||||||    
T  15432419 acaaattcagagactaaattgatatttcgcataattgagggatgaatttgaccgaccc 15432362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 326 - 395
Target Start/End: Original strand, 17948902 - 17948971
Alignment:
Q  326 gaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacga 395  Q
    ||||||| || ||||||||||||| ||||||||| |||  |||||||||||||||| ||||  |||||||    
T  17948902 gaaggacgaaattgattgacattttacaaattcaaggacgaaattgatatttcgcaaaatttggggacga 17948971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 405
Target Start/End: Complemental strand, 24205720 - 24205635
Alignment:
Q  320 tgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    ||||| || ||||||| |||||||||||||   ||||||||||| ||| ||||||||||| | ||||  |||||||| ||||||||    
T  24205720 tgaacggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccga 24205635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 405
Target Start/End: Original strand, 16764595 - 16764663
Alignment:
Q  337 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| ||||  |||||||| ||||||||    
T  16764595 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 16764663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 402
Target Start/End: Original strand, 39430 - 39481
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggc 402  Q
    ||||||||||||| ||| ||||||||||||||||||| || || ||||||||    
T  39430 acaaattcagggactaagttgatatttcgcataattgaggtacaaagttggc 39481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 337 - 408
Target Start/End: Complemental strand, 25619765 - 25619694
Alignment:
Q  337 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgaccc 408  Q
    ||||| ||||| | ||||||||||||| ||| ||||||||| ||||||||| |||| ||| ||| |||||||    
T  25619765 ttgatggacatatgacaaattcagggactaagttgatattttgcataattgagggatgaatttgaccgaccc 25619694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 351 - 385
Target Start/End: Complemental strand, 42001701 - 42001667
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataat 385  Q
    ||||||||| |||||||||||||||||||||||||    
T  42001701 acaaattcaaggattaaattgatatttcgcataat 42001667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 4047670 - 4047755
Alignment:
Q  20 attattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    |||| ||||||||  ||||| || |||| | | ||||| ||| ||| ||||||||||||| |||||||||| ||||||||| ||||    
T  4047670 attaatggaagaagtttttgggactttgaactctagatgacaaattataaaattagggtttcaattttatagatttggggaagaaa 4047755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 493 - 534
Target Start/End: Complemental strand, 33843976 - 33843935
Alignment:
Q  493 ggcgcagtggccgaccaccacaaggtggcggcgccgccgccg 534  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||    
T  33843976 ggcgcggtggccggccacctcaaggtggcggcgccgccgccg 33843935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 493 - 534
Target Start/End: Complemental strand, 34856082 - 34856041
Alignment:
Q  493 ggcgcagtggccgaccaccacaaggtggcggcgccgccgccg 534  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||    
T  34856082 ggcgcggtggccggccacctcaaggtggcggcgccgccgccg 34856041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 493 - 534
Target Start/End: Complemental strand, 34871144 - 34871103
Alignment:
Q  493 ggcgcagtggccgaccaccacaaggtggcggcgccgccgccg 534  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||    
T  34871144 ggcgcggtggccggccacctcaaggtggcggcgccgccgccg 34871103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 196; Significance: 1e-106; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 19 - 281
Target Start/End: Complemental strand, 17950939 - 17950676
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  | |||||||    
T  17950939 aattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaatagtcgttggaga 17950840  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
    |||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||    
T  17950839 aggacgagagccgttggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaatttaggtcattatcggccaaattagtccctgcctac 17950740  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaactga 281  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  17950739 gtggcatctgacatgtgagaggttaacggccacgtcagccccgttaacgctccgtttgaactga 17950676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 35174760 - 35174530
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  | |||||||    
T  35174760 aattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaatagtcgttggaga 35174661  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||    
T  35174660 aggaagagagccgttggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaatttaggtcattatcggccaaattagtccctgcctac 35174561  T
Q  218 gtggcgtctgatatgtgagaggttaacggcc 248  Q
    ||||||||||| |||||||||||||||||||    
T  35174560 gtggcgtctgacatgtgagaggttaacggcc 35174530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 19 - 256
Target Start/End: Complemental strand, 4289796 - 4289558
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || |||||||    
T  4289796 aattattggaagaaaatttggagattttggagtatagattacacattgtaaaattaggattccaattttatatatttggggaagaaatagccgttggaga 4289697  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
    ||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||  |||| |  |||    
T  4289696 aggaagagagccgttgggaaagaagagcaatttcctgaaattcaatcaacttagtctttgaaaatttaggtcattatcggccaactttgtctcagcttac 4289597  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacgtcagc 256  Q
    ||||| ||||| | |||||||||||||| ||||||||||    
T  4289596 gtggcatctgacaagtgagaggttaacgaccacgtcagc 4289558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 19 - 251
Target Start/End: Original strand, 34345037 - 34345270
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||| ||||||  | |||||||    
T  34345037 aattattggaagaaaatttgaagattttggagtgtagattacacattgtaaagttagggttccaattttatatattttaggaagaaatagtcgttggaga 34345136  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
    ||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| || ||   |||    
T  34345137 aggaagagagccgttggggaataagagcaatttcctgaaattcaatcaacttagtccttgaaaatttaggtcattatcggccaacttagtccctacttac 34345236  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacg 251  Q
    ||||| | ||| |||||||||||||||| |||||    
T  34345237 gtggcatttgacatgtgagaggttaacgaccacg 34345270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 17950724 - 17950593
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17950724 tgagaggttaacggccacgtcagccccgttaacgctccgtttgaactgaaggactgacttgattgacatttaacaaattcagggattaaattgatatttc 17950625  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| ||||||||||||||||||||||    
T  17950624 gcataattgagggacgaagttggccgacccgt 17950593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 304 - 410
Target Start/End: Complemental strand, 35174529 - 35174423
Alignment:
Q  304 ccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggcc 403  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||| |  ||||||||||||    
T  35174529 ccgttaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagaaattaaattgatatttcgtataattgagaaacgaagttggcc 35174430  T
Q  404 gacccgt 410  Q
    |||||||    
T  35174429 gacccgt 35174423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 30639774 - 30639643
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||| |||| || |||||||||||||  |||| |||| |||||||||||||||||||||||  ||||||||||||||||     
T  30639774 tgagaggttaacggccacgtcagccccgttaatgctccgtttgaacataagggctaagttgattgacatttaacaaattcatagattaaattgatatttt 30639675  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| ||||| || |||||||||||||    
T  30639674 gcataattgagggactaatttggccgacccgt 30639643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 281 - 396
Target Start/End: Original strand, 4646146 - 4646261
Alignment:
Q  281 agaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgc 380  Q
    |||||||||||| ||||||||| |||| ||||  |||||||| | |||||||||| |||||||||| |||||||||| ||||||||||||||||||||||    
T  4646146 agaggttaacggccacgtcagccccgttaacggcccgtttgaccagaaggactaaattgattgacaattaacaaatttagggattaaattgatatttcgc 4646245  T
Q  381 ataattgtgggacgaa 396  Q
    |||||||  |||||||    
T  4646246 ataattgatggacgaa 4646261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 281 - 406
Target Start/End: Original strand, 29114706 - 29114831
Alignment:
Q  281 agaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgc 380  Q
    |||||||||||| ||||||||| |||| || |  |||||||| | |||||||||| |||||||||| ||||||||||||||||| ||||||| |||||||    
T  29114706 agaggttaacggccacgtcagccccgttaatggcccgtttgaccagaaggactaaattgattgacaattaacaaattcagggatgaaattgaaatttcgc 29114805  T
Q  381 ataattgtgggacgaagttggccgac 406  Q
    |||||||  |||| || |||||||||    
T  29114806 ataattgaaggactaatttggccgac 29114831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 30639817 - 30639729
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| || ||| ||||||||||| ||| |||||||||||||||||||||||||||||||| || | |||||||||||    
T  30639817 attatcggccaaattactccctgcctacgtggcgtttgacatgtgagaggttaacggccacgtcagccccgttaatgctccgtttgaac 30639729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 353 - 410
Target Start/End: Complemental strand, 4641444 - 4641387
Alignment:
Q  353 aaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    |||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||    
T  4641444 aaattcagggattaaattgatatttcacataattgagggacgaatttggccgacccgt 4641387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 3018465 - 3018520
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgac 406  Q
    ||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||    
T  3018465 acaaattcagggactaagttgatatttcgcataattgagggacgaagttggccgac 3018520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 261
Target Start/End: Original strand, 29114661 - 29114732
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgt 261  Q
    |||||| ||||||||| || ||| ||||||||||| ||| |||| |||||||||||||||||||||||||||    
T  29114661 attatcagccaaattagtccctgcctacgtggcgtatgacatgtaagaggttaacggccacgtcagccccgt 29114732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 353 - 410
Target Start/End: Complemental strand, 2968228 - 2968171
Alignment:
Q  353 aaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||  |||||||    
T  2968228 aaattcagggattaaattgatatttcgcataattgagggacgaatttgggagacccgt 2968171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 4646111 - 4646187
Alignment:
Q  200 aaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttga 276  Q
    |||||| || ||| ||||||||||| ||| |||| ||||||||||||||||||||||||||| ||||  ||||||||    
T  4646111 aaattagtccctgcctacgtggcgtatgacatgtaagaggttaacggccacgtcagccccgttaacggcccgtttga 4646187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 279 - 395
Target Start/End: Original strand, 31210368 - 31210484
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||| |||||| ||| | |   ||| || || ||||||| |||||| |||| ||||||||||||||||| | || |||||||    
T  31210368 tgagaggttaacggccacgtcaacaccgttaacacccaaattggacggagggactaaattgatttacatataacaaattcagggatttatttaatatttc 31210467  T
Q  379 gcataattgtgggacga 395  Q
    ||||||||  |||||||    
T  31210468 gcataattaagggacga 31210484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 31210181 - 31210222
Alignment:
Q  35 ttttgagattttggagtgtagattacacattgtaaaattagg 76  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  31210181 ttttgagattttggagtgtagattacagattgtaaaattagg 31210222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 17936251 - 17936342
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacc 110  Q
    ||||| ||||||||| ||| |  |||||||| ||||||||| | |||| |||||||||||| |||||||||| ||||| ||| |||| ||||    
T  17936251 aattaatggaagaaattttgggaattttggattgtagattagagattgaaaaattagggtttcaattttatagatttgaggaagaaagaacc 17936342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 29077419 - 29077364
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgac 406  Q
    |||||||||||||| ||||||| |||||||||||||| ||||| || |||||||||    
T  29077419 acaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgac 29077364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 29112391 - 29112336
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgac 406  Q
    |||||||||||||| ||||||| |||||||||||||| ||||| || |||||||||    
T  29112391 acaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgac 29112336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 110
Target Start/End: Complemental strand, 13611038 - 13610999
Alignment:
Q  71 attagggttccaattttatatatttggggatgaaataacc 110  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  13611038 attagggttccaaatttatatatttggggaagaaataacc 13610999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 110
Target Start/End: Complemental strand, 32437519 - 32437480
Alignment:
Q  71 attagggttccaattttatatatttggggatgaaataacc 110  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  32437519 attagggttccaaatttatatatttggggaagaaataacc 32437480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 493 - 534
Target Start/End: Original strand, 22481401 - 22481442
Alignment:
Q  493 ggcgcagtggccgaccaccacaaggtggcggcgccgccgccg 534  Q
    ||||| |||||||||||||| | |||||||||||||||||||    
T  22481401 ggcgcggtggccgaccaccaaagggtggcggcgccgccgccg 22481442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 19 - 281
Target Start/End: Original strand, 5784580 - 5784843
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||    
T  5784580 aattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaatagccgttggaga 5784679  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
    ||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||    
T  5784680 aggaagagagccgttggggaagaagagctatttcctgaaattcaatcaacttagtccttgaaaatttaggtcattatcggccaaattagtccctgcctac 5784779  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaactga 281  Q
    || |||||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||||||||    
T  5784780 gttgcgtctgacatgtgagagtttaacggtcacgtcagccccgttaacgctccgtttgaactga 5784843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 19 - 281
Target Start/End: Complemental strand, 11152923 - 11152660
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||| || |||||||    
T  11152923 aattattggaagaaaatttggagattttggagtgtagattaaacattgtaaaattagggttccaattttatacatttggggaagaaatagccgttggaga 11152824  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
    ||||||| |||  ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  11152823 aggaagagagctgttgggtaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaatttaggtcattatcggccaaattagtctctgcctac 11152724  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaactga 281  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||| ||   ||||||||||||||    
T  11152723 gtggcgtctgacatgtgagaggttaacggccacgttagcctcgttaatactccgtttgaactga 11152660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 279 - 410
Target Start/End: Original strand, 5784795 - 5784926
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5784795 tgagagtttaacggtcacgtcagccccgttaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 5784894  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| |||||||||||| |||||||||    
T  5784895 gcataattgagggacgaagttgaccgacccgt 5784926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 283 - 410
Target Start/End: Original strand, 31803632 - 31803759
Alignment:
Q  283 aggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcat 382  Q
    |||||||||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31803632 aggttaacggccacgtcagccccgttaacgctccgtttgaacagaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcat 31803731  T
Q  383 aattgtgggacgaagttggccgacccgt 410  Q
    |||||  |||||||||||||||||||||    
T  31803732 aattgaaggacgaagttggccgacccgt 31803759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 45379248 - 45379117
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||| | |||| || ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45379248 tgagaggttaacggccacgtcaaccccgttaatgctccgtttgaacagaaggactaacttgattgacatttaacaaatttagggattaaattgatatttc 45379149  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||  ||||||||||||||||||||||    
T  45379148 gcataattaagggacgaagttggccgacccgt 45379117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 11152708 - 11152577
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||| |||  ||| ||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11152708 tgagaggttaacggccacgttagcctcgttaatactccgtttgaactgaaggactaacttgattgacatttaacaaattctgggattaaattgatatttc 11152609  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| |||||||| |||||||||||||    
T  11152608 gcataattgagggacgaaattggccgacccgt 11152577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 283 - 410
Target Start/End: Complemental strand, 46636924 - 46636797
Alignment:
Q  283 aggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcat 382  Q
    |||||||||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  46636924 aggttaacggccacgtcagccccgttaacgctccgtttgaacagaaggactaacttgattgacatttaacaaattcagaaattaaattgatatttcgcat 46636825  T
Q  383 aattgtgggacgaagttggccgacccgt 410  Q
    |||||  |||||||||| ||||||||||    
T  46636824 aattgaaggacgaagttagccgacccgt 46636797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 35478250 - 35478119
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||||||||| ||| |||| ||||||| |||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||     
T  35478250 tgagaggttaacggtcacgttagccccgttaacgctctgtttgaacagaagggctaacttgattgacatttaataaattcagggattaaattgatatttt 35478151  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| ||||| || |||||||||||||    
T  35478150 gcataattgagggactaatttggccgacccgt 35478119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 27952430 - 27952559
Alignment:
Q  281 agaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgc 380  Q
    |||||||||||| ||||||||| |||| ||||  |||||||| | |||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  27952430 agaggttaacggccacgtcagccccgttaacggcccgtttgaccagaaggactaaattgattgacaattaacaaattcagggattaaattgatatttcgc 27952529  T
Q  381 ataattgtgggacgaagttggccgacccgt 410  Q
    ||||||| |||||||| |||||||||||||    
T  27952530 ataattgagggacgaatttggccgacccgt 27952559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 33679422 - 33679291
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||| |   || |||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33679422 tgagaggttaacggccacgtcaaccttgttaacgctccgtttgaatagaaggactaacttgattgacatttaacaaattcaaggattaaattgatatttc 33679323  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| |||||||| ||||| |||||||    
T  33679322 gcataattgagggacgaatttggctgacccgt 33679291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 279 - 405
Target Start/End: Original strand, 42136172 - 42136298
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    ||||||| |||||  ||||||||| | || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42136172 tgagaggataacgaccacgtcagccctgttaacgctccgtttgaacagaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 42136271  T
Q  379 gcataattgtgggacgaagttggccga 405  Q
    ||||||||   ||||||||||| ||||    
T  42136272 gcataattaaaggacgaagttgaccga 42136298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 279 - 405
Target Start/End: Original strand, 44159222 - 44159348
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||     
T  44159222 tgagaggttaacggtcacgtcagccccgttaacgcttcgtttgaacagaatgactaacttgattgacatttaacaaattcaggaattaaattgatatttt 44159321  T
Q  379 gcataattgtgggacgaagttggccga 405  Q
    ||||||||  |||||||| ||| ||||    
T  44159322 gcataattaagggacgaaattgaccga 44159348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 279 - 408
Target Start/End: Original strand, 6577033 - 6577162
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||| ||||||| ||||||||| || | |||||||||||||||| ||||| |||||||||||||||||||  ||||||||||||||||||||||||||    
T  6577033 tgagagattaacggccacgtcagccccattaacgctccgtttgaacagaagggctaacttgattgacatttagtaaattcagggattaaattgatatttc 6577132  T
Q  379 gcataattgtgggacgaagttggccgaccc 408  Q
    |||||||||  |||| || || ||||||||    
T  6577133 gcataattgaaggactaatttagccgaccc 6577162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 18180633 - 18180537
Alignment:
Q  309 aacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||| ||||||||    
T  18180633 aacgctccgtttgaacagaaggactaccttgattgacatttaacaaattcaggaattaaattgatatttcgcataattgagggatgaatttggccga 18180537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 281 - 406
Target Start/End: Complemental strand, 47264285 - 47264160
Alignment:
Q  281 agaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgc 380  Q
    |||||||||||| |||||||||||||| |||   |||||||| | |||||||||| |||||||||| ||||||||||||||||| ||||||| |||||||    
T  47264285 agaggttaacggccacgtcagcaccgttaacagcccgtttgaccagaaggactaaattgattgacaattaacaaattcagggatgaaattgaaatttcgc 47264186  T
Q  381 ataattgtgggacgaagttggccgac 406  Q
    ||||||| ||||| || |||||||||    
T  47264185 ataattgagggactaaattggccgac 47264160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 25172745 - 25172991
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||| ||| |||||||||||| ||| |||| | |||||||||||||||||| ||||||||||| |  |||| |||| |||  |||||||    
T  25172745 aattattggaagaaattttggagattttggagcgtacattaaagattgtaaaattagggttctaattttatataatctgggaagaaagaactgttggaga 25172844  T
Q  119 aggaag--atagccattggggaagaagagca-atttcctgaaattcaatcaacttagtcctt-gaaaattaggtcattatcggccaaattaatctctgtc 214  Q
    || |||  |||| | |||||| || | || | |||| ||| || |||||||| || |||||| |||| || ||||| |||||| ||||||| ||||||      
T  25172845 agaaagaaatagtcgttgggggaggaaagaacattttctgcaaatcaatcaaattcgtccttggaaattttggtcactatcggtcaaattagtctctgct 25172944  T
Q  215 tacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgt 261  Q
    || ||| | ||||| ||||||||||||||||| ||||||||| ||||    
T  25172945 tatgtgacatctgacatgtgagaggttaacggtcacgtcagcaccgt 25172991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 160 - 278
Target Start/End: Complemental strand, 46637002 - 46636883
Alignment:
Q  160 tcaatcaacttagtccttgaaaat-taggtcattatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccc 258  Q
    |||||||| ||||||||| ||||| |  || |||||||||||||||| || ||| ||||||||||||||| |||||| ||||||||||||||||||||||    
T  46637002 tcaatcaatttagtccttcaaaatgtttgttattatcggccaaattagtccctgcctacgtggcgtctgacatgtgaaaggttaacggccacgtcagccc 46636903  T
Q  259 cgtcaacgttccgtttgaac 278  Q
    ||| |||| |||||||||||    
T  46636902 cgttaacgctccgtttgaac 46636883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 6576990 - 6577078
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| || ||| ||||||||||||||| ||||||||| |||||||||||||||||||| | |||| |||||||||||    
T  6576990 attatcggccaaattagtccctgcctacgtggcgtctgacatgtgagagattaacggccacgtcagccccattaacgctccgtttgaac 6577078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 31803585 - 31803673
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| || | | ||||||||||||||| |||||| ||||||||||||||||||||||||| |||| |||||||||||    
T  31803585 attatcggccaaattagtccccgcctacgtggcgtctgacatgtgaaaggttaacggccacgtcagccccgttaacgctccgtttgaac 31803673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 45379291 - 45379203
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| || ||| |||||||||| |||||||||||||||||||||||||||||| |||||| || | |||||||||||    
T  45379291 attatcggccaaattagtccctgcctacgtggcgcctgatatgtgagaggttaacggccacgtcaaccccgttaatgctccgtttgaac 45379203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 44159179 - 44159267
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| ||  || |||||||||| |||| ||||||||||||||||| |||||||||||||| |||| | |||||||||    
T  44159179 attatcggccaaattagtcattgcctacgtggcgcctgacatgtgagaggttaacggtcacgtcagccccgttaacgcttcgtttgaac 44159267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 33679465 - 33679378
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaa 277  Q
    |||||||| ||||||| || ||| ||||||||||||||| ||||||||||||||||||||||||| ||  || |||| ||||||||||    
T  33679465 attatcggtcaaattagtccctgcctacgtggcgtctgacatgtgagaggttaacggccacgtcaaccttgttaacgctccgtttgaa 33679378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 42136129 - 42136217
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||| | ||||||| |||||| ||||||||||||||  |||||||||| ||||| |||||||||||| || |||| |||||||||||    
T  42136129 attatcagtcaaattagtctctgcctacgtggcgtctgccatgtgagaggataacgaccacgtcagccctgttaacgctccgtttgaac 42136217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 18180685 - 18180630
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacg 245  Q
    |||||||||||||||| || ||||||||||||||||||| ||||||||||||||||    
T  18180685 attatcggccaaattagtccctgtctacgtggcgtctgacatgtgagaggttaacg 18180630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 51123256 - 51123357
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||  ||| |  |||||||||||| |||||   |||||||||||||||||||||||||||| ||||| ||| |||||| || |||| ||    
T  51123256 aattattggaagaatttttgggaattttggagtgtggattaatgattgtaaaattagggttccaattttatacatttgaggaagaaatagccattgggga 51123355  T
Q  119 ag 120  Q
    ||    
T  51123356 ag 51123357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 35478293 - 35478205
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| || ||   ||||||| |||||| ||||||||||||||||| ||||| |||||||| |||| || ||||||||    
T  35478293 attatcggccaaattagtccctacgtacgtggtgtctgacatgtgagaggttaacggtcacgttagccccgttaacgctctgtttgaac 35478205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 261
Target Start/End: Complemental strand, 47264330 - 47264259
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgt 261  Q
    |||||| ||||||||| || ||| ||||||||||| ||| |||| |||||||||||||||||||||| ||||    
T  47264330 attatcagccaaattagtccctgcctacgtggcgtatgacatgtaagaggttaacggccacgtcagcaccgt 47264259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 286 - 363
Target Start/End: Original strand, 34041763 - 34041840
Alignment:
Q  286 ttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcaggga 363  Q
    |||||||||||||||||||||| ||| ||||  ||| || || ||||||| || |||||||||| |||||||||||||    
T  34041763 ttaacggtcacgtcagcaccgttaacactccaattggacagatggactaaatttattgacattttacaaattcaggga 34041840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 44157526 - 44157465
Alignment:
Q  349 taacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||||||||| ||| ||||||||| ||||||||| |||| ||| |||||||||||||    
T  44157526 taacaaattcagggactaagttgatattttgcataattgagggatgaatttggccgacccgt 44157465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 353 - 396
Target Start/End: Complemental strand, 27940697 - 27940654
Alignment:
Q  353 aaattcagggattaaattgatatttcgcataattgtgggacgaa 396  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||    
T  27940697 aaattcaaggattaaattgatatttcgcataattgagggacgaa 27940654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 351 - 410
Target Start/End: Original strand, 33685281 - 33685340
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    |||||||||  |||||||||||||||||||||||||| |||| ||| ||| |||||||||    
T  33685281 acaaattcaatgattaaattgatatttcgcataattgagggatgaatttgaccgacccgt 33685340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 36895543 - 36895598
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgac 406  Q
    ||||||||||||| ||| |||||||||||||||||||  ||||||||||| |||||    
T  36895543 acaaattcagggactaagttgatatttcgcataattgatggacgaagttgaccgac 36895598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 351 - 410
Target Start/End: Complemental strand, 42134573 - 42134514
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||||||| ||| ||||||||||||||||||| |||| ||  |||||||||||||    
T  42134573 acaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccgt 42134514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 46638840 - 46638895
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgac 406  Q
    ||||||||| ||| ||| ||||||||||||||||||| |||| |||||||||||||    
T  46638840 acaaattcaaggactaagttgatatttcgcataattgagggatgaagttggccgac 46638895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 279 - 386
Target Start/End: Original strand, 51123483 - 51123590
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||| |||| ||| | ||  || |   ||||||| || ||||||||||||| | |||||||||||  |||||||||||||    
T  51123483 tgagaggttaacggccacgtcagctccgttaacaccccagttaattggaaggacgaaattgattgacattttataaattcagggacgaaattgatatttc 51123582  T
Q  379 gcataatt 386  Q
    ||| ||||    
T  51123583 gcaaaatt 51123590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 6576817 - 6576902
Alignment:
Q  20 attattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    ||||||||| |||| ||  | |||||| ||||||||||| || |||||  ||||||||||||||||||||| | ||||||| ||||    
T  6576817 attattggaggaaatttaggtgattttagagtgtagattgcagattgtttaattagggttccaattttatacaattggggaagaaa 6576902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 27952410 - 27952471
Alignment:
Q  215 tacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttga 276  Q
    ||||||||||  || |||| ||||||||||||||||||||||||||| ||||  ||||||||    
T  27952410 tacgtggcgtaagacatgtaagaggttaacggccacgtcagccccgttaacggcccgtttga 27952471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 337 - 406
Target Start/End: Original strand, 47269475 - 47269544
Alignment:
Q  337 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgac 406  Q
    ||||| ||| ||| |||||||||||||| ||||||| |||||| ||||||| ||||| || |||||||||    
T  47269475 ttgatggacgtttgacaaattcagggatgaaattgaaatttcgtataattgagggactaatttggccgac 47269544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 18058176 - 18058124
Alignment:
Q  53 tagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    ||||| ||| |||||||||||| ||||||||||||||| ||||||||| ||||    
T  18058176 tagatgacaaattgtaaaattaaggttccaattttataaatttggggaagaaa 18058124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 329 - 405
Target Start/End: Complemental strand, 26223700 - 26223624
Alignment:
Q  329 ggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    ||||||| |||||||||||||   ||||||||||| ||| ||||||||||||| ||||  |||||||| ||| ||||    
T  26223700 ggactaatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccga 26223624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 42558303 - 42558251
Alignment:
Q  53 tagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    ||||| ||| ||||||||||||||||||||||||| || ||||||||| ||||    
T  42558303 tagatgacagattgtaaaattagggttccaattttctagatttggggaagaaa 42558251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 405
Target Start/End: Complemental strand, 46582115 - 46582047
Alignment:
Q  337 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| ||||  |||||||| ||||||||    
T  46582115 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga 46582047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 410
Target Start/End: Original strand, 18183976 - 18184035
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||||||| ||| ||||||||||||||||||| |||| ||  |||||||| ||||    
T  18183976 acaaattcagggactaagttgatatttcgcataattgagggatgattttggccgaaccgt 18184035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 31801724 - 31801669
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgac 406  Q
    ||||||| | ||| ||| ||||||||||||||||||| |||||||||||| |||||    
T  31801724 acaaatttaaggactaagttgatatttcgcataattgagggacgaagttgaccgac 31801669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 110
Target Start/End: Complemental strand, 46582342 - 46582303
Alignment:
Q  71 attagggttccaattttatatatttggggatgaaataacc 110  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  46582342 attagggttccaaatttatatatttggggaagaaataacc 46582303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 279 - 316
Target Start/End: Original strand, 25172963 - 25173000
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctcc 316  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  25172963 tgagaggttaacggtcacgtcagcaccgttaacactcc 25173000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 279 - 364
Target Start/End: Original strand, 43870242 - 43870327
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggat 364  Q
    |||||||||||||| ||||||| |||||| ||||| ||   || ||  ||||||||| |||||||| || | ||||||||||||||    
T  43870242 tgagaggttaacggccacgtcatcaccgttaacgccccaaatggacgtaaggactaatttgattgagatatgacaaattcagggat 43870327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 188; Significance: 1e-101; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 19 - 281
Target Start/End: Complemental strand, 40019534 - 40019271
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  | |||||||    
T  40019534 aattattggaagaaaatttggagattttggggtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaatagtcgttggaga 40019435  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
    ||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| || ||| ||||    
T  40019434 aggaagagaaccgttggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaatttagatcattatcggccaaattagtccctgcctac 40019335  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaactga 281  Q
    ||||||||||| |||||||||||||||||||||| ||||||||| |||| ||||||||||||||    
T  40019334 gtggcgtctgacatgtgagaggttaacggccacgacagccccgttaacgctccgtttgaactga 40019271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 28432597 - 28432356
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || || || |||||||    
T  28432597 aattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggacaaattagccgttggaga 28432498  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaattaggtcattatcggccaaattaatctctgtctacg 218  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||| ||| || |||  ||||    
T  28432497 aggaagagagcctttggggaagaagagcaatttcctgaaattcaatcaacttagtccttg-aatttaggtcattatcagccaacttagtccctgcttacg 28432399  T
Q  219 tggcgtctgatatgtgagaggttaacggccacgtcagccccgt 261  Q
    || | ||||| |||||||||||||||| |||||||||| ||||    
T  28432398 tgacatctgacatgtgagaggttaacgaccacgtcagcaccgt 28432356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 40019319 - 40019188
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| |||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40019319 tgagaggttaacggccacgacagccccgttaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 40019220  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| ||||||||||||||||||||||    
T  40019219 gcataattgagggacgaagttggccgacccgt 40019188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 24527059 - 24526928
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||||||||  ||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24527059 tgagaggttaacggtcacgatagccccgttaacgctccgtttgaacagaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 24526960  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
     |||||||| ||||||||||||||||||||||    
T  24526959 acataattgagggacgaagttggccgacccgt 24526928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 279 - 410
Target Start/End: Original strand, 31823404 - 31823535
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31823404 tgagaggttaacggccacgtcagccccgttaacgctccgtttgaacataaggactaacttgattgacatttaacaaatttagggattaaattgatatttc 31823503  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| ||||||||||||||||||||||    
T  31823504 gcataattgagggacgaagttggccgacccgt 31823535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 279 - 410
Target Start/End: Original strand, 32824199 - 32824330
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||| ||||||||||| | |||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  32824199 tgagaggttagcggtcacgtcaaccccgttaacgctccgtttgaacagaagggctaacttgattgacatttaacaaattcagtgattaaattgatatttc 32824298  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| ||||| || |||||||||||||    
T  32824299 gcataattgagggactaatttggccgacccgt 32824330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 283 - 410
Target Start/End: Complemental strand, 33748491 - 33748364
Alignment:
Q  283 aggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcat 382  Q
    |||||||||  ||||||||| |||| ||||||||||| ||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33748491 aggttaacgaccacgtcagccccgttaacgctccgttcgaacataaggactaacttgattgacatttaacaaattcaggaattaaattgatatttcgcat 33748392  T
Q  383 aattgtgggacgaagttggccgacccgt 410  Q
    |||||  |||||||||||||||||||||    
T  33748391 aattgaaggacgaagttggccgacccgt 33748364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 279 - 400
Target Start/End: Original strand, 1322242 - 1322363
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||  ||||||||| |||| |||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||     
T  1322242 tgagaggttaacgaccacgtcagccccgttaacgctccgtttgaacagaatgactaacttgattgatatttaacaaattcagggattaaattgatatttt 1322341  T
Q  379 gcataattgtgggacgaagttg 400  Q
    ||||||||| ||||||||||||    
T  1322342 gcataattgagggacgaagttg 1322363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 461339 - 461208
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    ||||||||||||||| | |||||| |||| ||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  461339 tgagaggttaacggtgatgtcagccccgttaacactccgtttgaacaaaaggactaacttgattgacatttaacaaattcagggattaaattgttatttc 461240  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
     |||||||| |||| ||| |||||||||||||    
T  461239 acataattgagggatgaatttggccgacccgt 461208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 42894939 - 42894808
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||| ||   ||| |||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42894939 tgagaggttaacggccacgttagtctcgttaacgctccatttaaacagaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 42894840  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||  |||||||| |||| ||||||||    
T  42894839 gcataattaagggacgaatttggtcgacccgt 42894808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 279 - 387
Target Start/End: Complemental strand, 33158819 - 33158711
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||| |||| |||||| | ||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  33158819 tgagaggttaacggccacgtcagccccgttaacgcttcctttgaacagaaggactaacttaattgacatttaacaaattcaaggattaaattgatatttc 33158720  T
Q  379 gcataattg 387  Q
    |||||||||    
T  33158719 gcataattg 33158711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 279 - 387
Target Start/End: Complemental strand, 33368922 - 33368814
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| |||||||||||| | || |||| | |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33368922 tgagaggttaacggccacgtcagcaccattaatgctctggttgaacagaaggactaacttgattgacatttaacaaattcaaggattaaattgatatttc 33368823  T
Q  379 gcataattg 387  Q
    |||||||||    
T  33368822 gcataattg 33368814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 37525021 - 37524890
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||||||||||||  || | || ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  37525021 tgagaggttaacggtcacgtcagtcccattaatgctccgtttgaacagaaggactaacttgattgacatttaacaaattcagagattagattgatatttc 37524922  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
     |||||||  |||| ||| ||| |||||||||    
T  37524921 acataattaagggatgaatttgaccgacccgt 37524890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 20 - 266
Target Start/End: Complemental strand, 33159036 - 33158786
Alignment:
Q  20 attattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggagaa 119  Q
    |||| |||| |||| ||| | |||||||||||||||||| || |||||  |||||||||| |||||||||| | ||||||| |||||| || ||||||||    
T  33159036 attactggaggaaattttggtgattttggagtgtagattgcagattgtgtaattagggttacaattttatacaattggggaagaaatagccgttggagaa 33158937  T
Q  120 ggaagatagccattggggaagaagagcaa----tttcctgaaattcaatcaacttagtccttgaaaat-taggtcattatcggccaaattaatctctgtc 214  Q
    | || | ||||||| ||||||||   |||    ||| ||| || |||||||  |||||||||  |||| |  ||  ||||||||||||||| |||||| |    
T  33158936 gaaa-agagccatttgggaagaaagccaaaacattttctgcaaatcaatcactttagtcctttgaaatgtttgttcttatcggccaaattagtctctgcc 33158838  T
Q  215 tacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacg 266  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  33158837 tacgtggtgtctgacatgtgagaggttaacggccacgtcagccccgttaacg 33158786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 285 - 410
Target Start/End: Complemental strand, 31199642 - 31199517
Alignment:
Q  285 gttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataa 384  Q
    |||||||  ||||||||| |||| ||||  |||||||| | |||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||    
T  31199642 gttaacgtccacgtcagccccgttaacggcccgtttgaccagaaggactaaattgattgacaattaacaaattcagggattaaattgatatttctcataa 31199543  T
Q  385 ttgtgggacgaagttggccgacccgt 410  Q
    ||  |||||||| |||||||||||||    
T  31199542 ttaagggacgaatttggccgacccgt 31199517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 279 - 399
Target Start/End: Original strand, 9876490 - 9876610
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||| ||||||||| ||||||||| |||| || |||| |||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||     
T  9876490 tgagtggttaacggccacgtcagccccgttaaagctctgtttgaacagaaggattaacttgattgacatttaacaaattcaggtattaaattgatatttt 9876589  T
Q  379 gcataattgtgggacgaagtt 399  Q
    ||||||||  |||| ||||||    
T  9876590 gcataattaagggatgaagtt 9876610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 20 - 256
Target Start/End: Complemental strand, 33369139 - 33368899
Alignment:
Q  20 attattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggagaa 119  Q
    |||||||||||||  ||| | |||||||||||||||||| || ||| |  ||||||||||||||||||||||||||||||| |||| | || |||| |||    
T  33369139 attattggaagaagttttggtgattttggagtgtagattgcagattatgtaattagggttccaattttatatatttggggaagaaagagccgttggggaa 33369040  T
Q  120 ggaagatagccattggggaagaagagcaa----tttcctgaaattcaatcaacttagtccttgaaaat-taggtcattatcggccaaattaatctctgtc 214  Q
    | || | | |  |||||||||||   |||    ||| ||| || |||||||| || |||||  ||||| |  || |||||||||||||||| ||  ||||    
T  33369039 gtaa-agatctgttggggaagaaagccaaaatattttctgcaaatcaatcaatttggtcctctaaaatgtttgttattatcggccaaattagtcattgtc 33368941  T
Q  215 tacgtggcgtctgatatgtgagaggttaacggccacgtcagc 256  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  33368940 tacgtggcgtctgacatgtgagaggttaacggccacgtcagc 33368899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 9186346 - 9186437
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacc 110  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  9186346 aattattggaagaaatttatgggattttggagtgtagattacagattgtaaaattagggtttcaattttaaatatttggggaagaaataacc 9186437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 20 - 278
Target Start/End: Original strand, 9876273 - 9876535
Alignment:
Q  20 attattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggagaa 119  Q
    ||||||||| |||| ||||| |||| | ||||||||||| || |||||| |||||||||| |||||||||| | ||||||| |||| |    |||| |||    
T  9876273 attattggaggaaatttttgtgattatagagtgtagattgcagattgtataattagggtttcaattttatacaattggggaagaaagagttgttggggaa 9876372  T
Q  120 ggaagatagccattggggaagaagagcaa----tttcctgaaattcaatcaacttagtccttgaaaat-taggtcattatcggccaaattaatctctgtc 214  Q
    | || | ||| ||| ||||||||   |||    ||| ||  || |||||||| ||||||||| ||||| |  || |||||||||||||||| ||  ||||    
T  9876373 gaaa-agagctatttgggaagaaagtcaaaacattttctacaaatcaatcaatttagtccttcaaaatgtttgttattatcggccaaattagtccatgtc 9876471  T
Q  215 tacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| || | || ||||||||    
T  9876472 tacgtggcgtctgacatgtgagtggttaacggccacgtcagccccgttaaagctctgtttgaac 9876535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 11031784 - 11031698
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    ||||||||||||||| ||| | ||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||| ||||    
T  11031784 aattattggaagaaattttggggattttggagtgtagattatagattgtaaaattaggcttccaattttatatatttggggaagaaa 11031698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 283 - 405
Target Start/End: Original strand, 25707233 - 25707355
Alignment:
Q  283 aggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcat 382  Q
    ||||||||||||||||||||| ||| ||||| |   || ||| |||||| ||||||||||||| | | ||||||||||||||||| ||||||||||||||    
T  25707233 aggttaacggtcacgtcagcatcgttaacgccctagtttaacagaaggattaacttgattgacgtctcacaaattcagggattaagttgatatttcgcat 25707332  T
Q  383 aattgtgggacgaagttggccga 405  Q
    ||||| |||| ||| ||||||||    
T  25707333 aattgagggatgaatttggccga 25707355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 48 - 278
Target Start/End: Original strand, 31823215 - 31823449
Alignment:
Q  48 gagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggagaaggaagatagccattggggaagaagagca 147  Q
    ||||||||||| || |||||  ||||||||||||||||||||| | ||||||| |||| | |  |||| |||| || |||| |||| ||||||||   ||    
T  31823215 gagtgtagattgcagattgtgtaattagggttccaattttatacaattggggaagaaagagctgttggggaagaaa-atagtcatttgggaagaaagcca 31823313  T
Q  148 a----tttcctgaaattcaatcaacttagtccttgaaaat-taggtcattatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggtta 242  Q
    |    ||| ||| || |||||||| |||||||||  |||| |  || ||||||  |||||||| || ||  ||||||||||||||| |||||||||||||    
T  31823314 aaacattttctgcaaatcaatcaatttagtccttcgaaatgtttgttattatcaaccaaattagtccctacctacgtggcgtctgacatgtgagaggtta 31823413  T
Q  243 acggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    ||||||||||||||||||| |||| |||||||||||    
T  31823414 acggccacgtcagccccgttaacgctccgtttgaac 31823449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 33748538 - 33748450
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| |||||| ||||||||||||||| |||||| ||||||||| ||||||||||||||| |||| |||||| ||||    
T  33748538 attatcggccaaattagtctctgcctacgtggcgtctgacatgtgaaaggttaacgaccacgtcagccccgttaacgctccgttcgaac 33748450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 25705656 - 25705575
Alignment:
Q  24 ttggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    |||||||||| ||| | ||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||    
T  25705656 ttggaagaaattttggtgattttggagtgtagattacatatagtataattagggttccaattttatatatttggggaagaaa 25705575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 279 - 383
Target Start/End: Original strand, 8655915 - 8656019
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    ||||||||||| |  ||| ||||| |||| ||||| || ||||||| |||||| ||| |||||||||| ||||||||||| |||||||||||||||||||    
T  8655915 tgagaggttaatgaccacatcagccccgttaacgccccatttgaacagaaggattaaattgattgacaattaacaaattctgggattaaattgatatttc 8656014  T
Q  379 gcata 383  Q
    |||||    
T  8656015 gcata 8656019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 10268179 - 10268091
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaata 107  Q
    ||||||||||||||| ||  | ||||||||||||||||||| | |||| |||||||||||||||||| |||||||||||||| ||||||    
T  10268179 aattattggaagaaatttgggggattttggagtgtagattatagattgaaaaattagggttccaattctatatatttggggaagaaata 10268091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 160 - 278
Target Start/End: Original strand, 1322168 - 1322287
Alignment:
Q  160 tcaatcaacttagtccttgaaaat-taggtcattatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccc 258  Q
    |||||||| ||||||||| ||||| |  || |||||||||||||||| ||  || ||| |||||| |||| |||||||||||||||| ||||||||||||    
T  1322168 tcaatcaatttagtccttcaaaatgtttgttattatcggccaaattagtccttgcctatgtggcgcctgacatgtgagaggttaacgaccacgtcagccc 1322267  T
Q  259 cgtcaacgttccgtttgaac 278  Q
    ||| |||| |||||||||||    
T  1322268 cgttaacgctccgtttgaac 1322287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 283 - 405
Target Start/End: Original strand, 25373554 - 25373676
Alignment:
Q  283 aggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcat 382  Q
    |||||||||| ||||||| || ||| ||||| | | || ||| |||||||||||||||||||| | | ||||||||||| ||||| ||||||||||||||    
T  25373554 aggttaacggccacgtcaacatcgttaacgccctggtttaacagaaggactaacttgattgacgtctgacaaattcaggaattaagttgatatttcgcat 25373653  T
Q  383 aattgtgggacgaagttggccga 405  Q
    ||||| || | ||| ||||||||    
T  25373654 aattgaggaatgaatttggccga 25373676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 25356710 - 25356625
Alignment:
Q  20 attattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    |||||||||||||| ||| | ||||||||||||||||||||| || ||| |||||| |||||| ||||||||||||||||| ||||    
T  25356710 attattggaagaaattttggtgattttggagtgtagattacatatagtataattagagttccagttttatatatttggggaagaaa 25356625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 10269250 - 10269338
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaata 107  Q
    ||||||||||||||| ||| | |||||||| |||||||||  | |||||||||||||| ||||||||||||||||||||| | ||||||    
T  10269250 aattattggaagaaattttggggattttggtgtgtagattgtagattgtaaaattaggcttccaattttatatatttgggaaagaaata 10269338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 25370685 - 25370581
Alignment:
Q  283 aggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcat 382  Q
    |||||||||  ||||||| |||| | ||| ||| | |||||  |||||||||||||||||||||||| ||||||||||||||||||||  |||||| |||    
T  25370685 aggttaacgaccacgtcaacaccattaacactctggttgaatagaaggactaacttgattgacatttgacaaattcagggattaaatttttatttcccat 25370586  T
Q  383 aattg 387  Q
    |||||    
T  25370585 aattg 25370581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 25370866 - 25370802
Alignment:
Q  41 gattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    ||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||    
T  25370866 gattttggagtgtagattacatatagtataattagggttccaattttatatatttggggaagaaa 25370802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 32824156 - 32824244
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| || ||  ||||||||||||||| ||||||||||||| ||| ||||||| |||||| |||| |||||||||||    
T  32824156 attatcggccaaattagtccctacctacgtggcgtctgacatgtgagaggttagcggtcacgtcaaccccgttaacgctccgtttgaac 32824244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 195 - 278
Target Start/End: Complemental strand, 24527097 - 24527014
Alignment:
Q  195 cggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    ||||||||||| ||| ||||||||||||| |||| ||||||||||||||||| ||||  |||||||| |||| |||||||||||    
T  24527097 cggccaaattactctatgtctacgtggcgcctgacatgtgagaggttaacggtcacgatagccccgttaacgctccgtttgaac 24527014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 25402522 - 25402607
Alignment:
Q  20 attattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    |||||||||||||| ||| |  |||||||||||||||||||| || ||| ||| |||||| |||||||||||||||||||| ||||    
T  25402522 attattggaagaaattttggttattttggagtgtagattacagatagtacaatcagggtttcaattttatatatttggggaagaaa 25402607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 25707031 - 25707116
Alignment:
Q  20 attattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    |||||||||||||| ||| |  |||||||||||||||||||| || ||| ||| |||||| |||||||||||||||||||| ||||    
T  25707031 attattggaagaaattttggttattttggagtgtagattacagatagtacaatcagggtttcaattttatatatttggggaagaaa 25707116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 353 - 410
Target Start/End: Original strand, 31201178 - 31201235
Alignment:
Q  353 aaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    |||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||    
T  31201178 aaattcagggattaaattgatatttcgcataattgatggacgaatttggccgacccgt 31201235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 15684134 - 15684048
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    ||||| ||||||||| |||||  |||||| | | ||||||||| ||||||||||| |||||||||||||||| ||||||||| ||||    
T  15684134 aattaatggaagaaatttttggaattttgaactctagattacagattgtaaaattggggttccaattttatagatttggggaagaaa 15684048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 190 - 276
Target Start/End: Complemental strand, 31199691 - 31199605
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttga 276  Q
    |||||||||||||||| || ||| ||||||||||| ||| |||| ||| ||||||| ||||||||||||||| ||||  ||||||||    
T  31199691 attatcggccaaattagtccctgcctacgtggcgtatgacatgtaagatgttaacgtccacgtcagccccgttaacggcccgtttga 31199605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 351 - 405
Target Start/End: Original strand, 33750417 - 33750471
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||    
T  33750417 acaaattcagggactaagttgatatttcgcataattgagggacgaagttggccga 33750471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 279 - 349
Target Start/End: Complemental strand, 38881563 - 38881493
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacattt 349  Q
    ||||| |||||||| |||||||||||||| |||||| || |||||| ||||| ||||||||||||||||||    
T  38881563 tgagaagttaacggccacgtcagcaccgttaacgctacggttgaacagaagggctaacttgattgacattt 38881493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 44620409 - 44620487
Alignment:
Q  42 attttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggagaag 120  Q
    |||||||||||| ||||| | ||||||||||||||||| |||||||||| ||||||||| |||||| || |||| ||||    
T  44620409 attttggagtgtggattaaagattgtaaaattagggtttcaattttatacatttggggaagaaatagccattggggaag 44620487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 10770717 - 10770640
Alignment:
Q  28 aagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    |||||| ||| | ||||||||||||  ||||||| ||||||||||||||| |||||||||||| ||||||||| ||||    
T  10770717 aagaaattttggggattttggagtgcggattacagattgtaaaattagggctccaattttatagatttggggaagaaa 10770640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 279 - 360
Target Start/End: Complemental strand, 12515247 - 12515166
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcag 360  Q
    |||||| ||||||| |||||||||||||| ||| ||||  |||||| || ||||||| ||||||||||||| ||||||||||    
T  12515247 tgagagcttaacggccacgtcagcaccgttaacactccaattgaacggagggactaaattgattgacattttacaaattcag 12515166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 294 - 387
Target Start/End: Complemental strand, 25705447 - 25705354
Alignment:
Q  294 cacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattg 387  Q
    ||||||| |||| | ||| ||||| |||||  |||||||||||||||||||||||| | ||||||| | ||||||||| |||||| ||||||||    
T  25705447 cacgtcaacaccattaacactccggttgaatagaaggactaacttgattgacatttgataaattcaagaattaaattgttatttcccataattg 25705354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 37525063 - 37524976
Alignment:
Q  191 ttatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    ||||||||||||||| || ||| | ||||| ||||||| ||||||||||||||||| |||||||| ||| | || | |||||||||||    
T  37525063 ttatcggccaaattagtccctgccaacgtgacgtctgacatgtgagaggttaacggtcacgtcagtcccattaatgctccgtttgaac 37524976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 25373352 - 25373437
Alignment:
Q  20 attattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    |||||||||||||| ||| |  |||||||||||||||||||| || | | ||| ||||||||||||| ||||||||| ||| ||||    
T  25373352 attattggaagaaattttggttattttggagtgtagattacatatagcacaatcagggttccaatttcatatatttgaggaagaaa 25373437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 38881779 - 38881694
Alignment:
Q  20 attattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    |||||||||||||| ||  | | |||||||||||| ||| || |||||  ||||| ||||||||||||||||||||||||| ||||    
T  38881779 attattggaagaaatttgggtggttttggagtgtacattgcatattgtgtaattaaggttccaattttatatatttggggaagaaa 38881694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 294 - 386
Target Start/End: Complemental strand, 25356497 - 25356405
Alignment:
Q  294 cacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataatt 386  Q
    ||||| |||||| | ||| ||||| |||||  ||| ||||||||||| |||||||| |||||| || ||||||||||| |||||| |||||||    
T  25356497 cacgttagcaccattaacactccggttgaatagaatgactaacttgagtgacatttgacaaatacaaggattaaattgttatttcccataatt 25356405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 25373507 - 25373571
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtca 254  Q
    |||||||| ||||||| |||||  ||| ||||||||||| |||||| ||||||||||||||||||    
T  25373507 attatcggacaaattagtctctacctatgtggcgtctgacatgtgaaaggttaacggccacgtca 25373571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 395
Target Start/End: Original strand, 44620597 - 44620713
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||| |||| ||| ||||  || |   ||||||| || ||||||| ||||| |||||||||||||  ||||||||||||     
T  44620597 tgagaggttaacggccacgtcagctccgttaacactccagttaattggaaggacgaaattgattgtcattttacaaattcagggacgaaattgatatttt 44620696  T
Q  379 gcataattgtgggacga 395  Q
    ||| ||||  |||||||    
T  44620697 gcaaaatttggggacga 44620713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 351 - 410
Target Start/End: Original strand, 42897807 - 42897866
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| ||| ||| |||||||||| |||||||| |||||||| |||||||||||||    
T  42897807 acaaattcaaggactaagttgatatttcacataattgagggacgaatttggccgacccgt 42897866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 11719836 - 11719750
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    ||||| ||||||||| ||| | ||||||||| | ||| | | | ||||||||||| |||||||||||||||| ||||||||| ||||    
T  11719836 aattaatggaagaaattttggggattttggactctaggtgataaattgtaaaattggggttccaattttatagatttggggaagaaa 11719750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 332 - 405
Target Start/End: Original strand, 15308240 - 15308313
Alignment:
Q  332 ctaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    |||| |||||||||||||   ||||||||||| ||| ||||||||||| ||||||  |||||||| ||||||||    
T  15308240 ctaatttgattgacattttgtaaattcagggactaatttgatatttcgaataattcagggacgaaattggccga 15308313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 332 - 405
Target Start/End: Original strand, 15488609 - 15488682
Alignment:
Q  332 ctaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    |||| |||||||||||||   ||||||||||| ||| ||||||||||| ||||||  |||||||| ||||||||    
T  15488609 ctaatttgattgacattttgtaaattcagggactaatttgatatttcgaataattcagggacgaaattggccga 15488682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 353 - 406
Target Start/End: Complemental strand, 31821507 - 31821454
Alignment:
Q  353 aaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgac 406  Q
    |||||| |||| ||| ||||||||||||||||||| |||||||||||| |||||    
T  31821507 aaattctgggactaagttgatatttcgcataattgagggacgaagttgaccgac 31821454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 329 - 405
Target Start/End: Original strand, 601680 - 601756
Alignment:
Q  329 ggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    ||||||| |||||||||||||   ||||||||||| ||| ||||||||||| | ||||  |||||||| ||||||||    
T  601680 ggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccga 601756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 395
Target Start/End: Original strand, 9186613 - 9186689
Alignment:
Q  319 ttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacga 395  Q
    |||||| || ||||||| ||||||||||| |  |||||| ||||| ||| ||||||||||||||||||  |||||||    
T  9186613 ttgaacggagggactaaattgattgacatatgccaaatttagggactaatttgatatttcgcataatttggggacga 9186689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 329 - 405
Target Start/End: Complemental strand, 13106917 - 13106841
Alignment:
Q  329 ggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    ||||||| |||||||| |||| | ||||||||||| ||| ||||||||||||| ||||  |||| ||| ||||||||    
T  13106917 ggactaatttgattgaaattttataaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccga 13106841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 329 - 405
Target Start/End: Complemental strand, 27404323 - 27404247
Alignment:
Q  329 ggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    ||||||| ||||||||||||| | ||||| ||||| ||  ||||||||||| ||||||  |||||||| ||||||||    
T  27404323 ggactaatttgattgacattttataaatttagggactattttgatatttcgaataattcagggacgaaattggccga 27404247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 38548831 - 38548883
Alignment:
Q  353 aaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    ||||||||||||||| ||||||||||||| ||||  |||||||| ||||||||    
T  38548831 aaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccga 38548883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 190 - 266
Target Start/End: Complemental strand, 38881605 - 38881530
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacg 266  Q
    ||||||| |||||||| ||  || ||||||||||||||  |||||||| |||||||||||||||||| |||| ||||    
T  38881605 attatcgaccaaattagtcattgcctacgtggcgtctgc-atgtgagaagttaacggccacgtcagcaccgttaacg 38881530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 405
Target Start/End: Original strand, 42943410 - 42943478
Alignment:
Q  337 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    |||||||||||||   ||||||||||| ||||| ||||||||||| ||||  |||||||| ||||||||    
T  42943410 ttgattgacattttgtaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccga 42943478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 461381 - 461294
Alignment:
Q  191 ttatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||| |||||||||| ||  || ||| ||||||| ||| |||||||||||||||||  | ||||||||||| |||  |||||||||||    
T  461381 ttattggccaaattagtccttgcctatgtggcgtatgacatgtgagaggttaacggtgatgtcagccccgttaacactccgtttgaac 461294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 410
Target Start/End: Complemental strand, 1320708 - 1320649
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||||||| ||| ||||||||| ||||||||| |||| ||| || ||||||||||    
T  1320708 acaaattcagggactaagttgatattttgcataattgagggatgaatttagccgacccgt 1320649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 266
Target Start/End: Original strand, 8655841 - 8655948
Alignment:
Q  160 tcaatcaacttagtcctt-gaaaattaggtcattatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccc 258  Q
    |||||||| ||||||||| |||| ||  || ||||||| |||||||| || ||  |||||||| || ||| |||||||||||||| | |||| |||||||    
T  8655841 tcaatcaatttagtccttcgaaatttttgttattatcgaccaaattagtccctacctacgtggtgtatgacatgtgagaggttaatgaccacatcagccc 8655940  T
Q  259 cgtcaacg 266  Q
    ||| ||||    
T  8655941 cgttaacg 8655948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 329 - 387
Target Start/End: Complemental strand, 11031542 - 11031484
Alignment:
Q  329 ggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattg 387  Q
    ||||||| ||||||||||| | ||||| ||||| | ||| |||||||||||||||||||    
T  11031542 ggactaaattgattgacatatgacaaactcaggaactaatttgatatttcgcataattg 11031484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 12515449 - 12515395
Alignment:
Q  26 ggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttc 80  Q
    |||||||| ||| | ||||||||||||||||||| | |||||||||||| |||||    
T  12515449 ggaagaaattttggggattttggagtgtagattaaagattgtaaaattacggttc 12515395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 190 - 256
Target Start/End: Original strand, 25707186 - 25707252
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagc 256  Q
    |||||||||||||||| |||||  ||| ||| | ||||| |||||| |||||||||| |||||||||    
T  25707186 attatcggccaaattagtctctacctatgtgacatctgacatgtgaaaggttaacggtcacgtcagc 25707252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 35510516 - 35510558
Alignment:
Q  71 attagggttccaattttatatatttggggatgaaataaccttt 113  Q
    ||||||||||||| |||||||||||||||| |||||| |||||    
T  35510516 attagggttccaaatttatatatttggggaagaaatagccttt 35510558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 8608343 - 8608294
Alignment:
Q  337 ttgattgacatttaacaaattcagggattaaattgatatttcgcataatt 386  Q
    ||||||||||||| | ||||||||||| ||| ||||||||||||| ||||    
T  8608343 ttgattgacattttataaattcagggactaatttgatatttcgcaaaatt 8608294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 363
Target Start/End: Complemental strand, 11719559 - 11719526
Alignment:
Q  330 gactaacttgattgacatttaacaaattcaggga 363  Q
    |||||| |||||||||||||||||||||||||||    
T  11719559 gactaatttgattgacatttaacaaattcaggga 11719526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 493 - 534
Target Start/End: Complemental strand, 21925690 - 21925649
Alignment:
Q  493 ggcgcagtggccgaccaccacaaggtggcggcgccgccgccg 534  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||    
T  21925690 ggcgcggtggccggccacctcaaggtggcggcgccgccgccg 21925649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 402
Target Start/End: Complemental strand, 33761174 - 33761109
Alignment:
Q  337 ttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggc 402  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| ||||  |||||||| |||||    
T  33761174 ttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggc 33761109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 184; Significance: 3e-99; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 19 - 281
Target Start/End: Complemental strand, 42619667 - 42619404
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||| || |||||||    
T  42619667 aattattggaagaaaatttggagattttggagtgtagattaaacattgtaaaattagggttccaattttatacatttggggaagaaatagccgttggaga 42619568  T
Q  119 aggaagatagccattggggaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaa-ttaggtcattatcggccaaattaatctctgtctac 217  Q
    ||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||    
T  42619567 aggaagagagccgttgggaaagaagagcaatttcctgaaattcaatcaacttagtccttgaaaatttaggtcattatcggccaaattagtccctgcctac 42619468  T
Q  218 gtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaactga 281  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| ||   ||||||||||||||    
T  42619467 gtggcgtctgacatgtgagaggttaacggccacgttagccccgttaatactccgtttgaactga 42619404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 279 - 410
Target Start/End: Original strand, 32089853 - 32089984
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| | ||||||| |||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32089853 tgagaggttaacggccgcgtcagccccgttaacgctccgtttgaacataaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 32089952  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| ||||||||||||||||||||||    
T  32089953 gcataattgagggacgaagttggccgacccgt 32089984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 279 - 410
Target Start/End: Original strand, 40330443 - 40330574
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    ||||||||| |||| |||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40330443 tgagaggttgacggccacgtcagcaccgttaacgctccgtttgaacagaaggactaacttgattcacatttaacaaattcagggattaaattgatatttc 40330542  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| |||||||  |||||||||||||    
T  40330543 gcataattgagggacgattttggccgacccgt 40330574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 280 - 410
Target Start/End: Original strand, 33257689 - 33257819
Alignment:
Q  280 gagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcg 379  Q
    ||||||||||||| |||||||||   || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33257689 gagaggttaacggccacgtcagccttgttaacgctccgtttgaacagaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcg 33257788  T
Q  380 cataattgtgggacgaagttggccgacccgt 410  Q
    |||||||  ||||||||||||||||||||||    
T  33257789 cataattaagggacgaagttggccgacccgt 33257819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 279 - 383
Target Start/End: Complemental strand, 43316943 - 43316839
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43316943 tgagaggttaacggtcacgtcagctccgttaacgctccgtttgaacagaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 43316844  T
Q  379 gcata 383  Q
    |||||    
T  43316843 gcata 43316839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 42619452 - 42619321
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||| ||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42619452 tgagaggttaacggccacgttagccccgttaatactccgtttgaactgaaggactaacttgattgacatttaacaaattctgggattaaattgatatttc 42619353  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||| |||||||| ||| |||||||||    
T  42619352 gcataattgagggacgaaattgaccgacccgt 42619321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 279 - 408
Target Start/End: Complemental strand, 38176795 - 38176666
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  38176795 tgagaggttaacggtcacgtcagccccgttaacactccgtttgaacagaaggagtaacttgattgatatttaacaaattcagggattaaattgatatttc 38176696  T
Q  379 gcataattgtgggacgaagttggccgaccc 408  Q
    ||||||||  |||||||| |||||| ||||    
T  38176695 gcataattaagggacgaatttggccaaccc 38176666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 279 - 408
Target Start/End: Complemental strand, 38204019 - 38203890
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  38204019 tgagaggttaacggtcacgtcagccccgttaacactccgtttgaacagaaggagtaacttgattgatatttaacaaattcagggattaaattgatatttc 38203920  T
Q  379 gcataattgtgggacgaagttggccgaccc 408  Q
    ||||||||  |||||||| |||||| ||||    
T  38203919 gcataattaagggacgaatttggccaaccc 38203890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 32836039 - 32835908
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||| |||| |||| || |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32836039 tgagaggttaacggccacgtcagccccgttaacgttctgtttgaaccgaaggactaacttgattgacatttaataaattcagggattaaattgatatttc 32835940  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||  |||||||| ||| |||||||||    
T  32835939 gcataattaagggacgaatttgaccgacccgt 32835908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 279 - 410
Target Start/End: Complemental strand, 35291211 - 35291080
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||| |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35291211 tgagaggttaacggccacgtcagctccgttaacgctccatttgaacagaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 35291112  T
Q  379 gcataattgtgggacgaagttggccgacccgt 410  Q
     |||| ||| |||| ||| |||||||| ||||    
T  35291111 acatagttgagggatgaatttggccgaaccgt 35291080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 279 - 401
Target Start/End: Complemental strand, 18726725 - 18726606
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||   |||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  18726725 tgagaggttaacggccacgtcagccccgttaacgctccgtttgaac---aggactaacttgattgacatttaacaaattaagggactaaattgatatttc 18726629  T
Q  379 gcataattgtgggacgaagttgg 401  Q
    ||||||||| |||||||||||||    
T  18726628 gcataattgagggacgaagttgg 18726606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 48 - 278
Target Start/End: Original strand, 32089664 - 32089898
Alignment:
Q  48 gagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggagaaggaagatagccattggggaagaagagca 147  Q
    ||||||||||| || |||||  ||||||||||||||||||||| | ||||||| |||| | |  |||| |||| || | ||||||| ||||||||   ||    
T  32089664 gagtgtagattgcagattgtgtaattagggttccaattttatacaattggggaagaaagagctgttggggaagaaa-agagccatttgggaagaaagcca 32089762  T
Q  148 a----tttcctgaaattcaatcaacttagtccttgaaaat-taggtcattatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggtta 242  Q
    |    ||| ||  || |||||||| ||||||||| ||||| |  || |||||||||||||||| || ||| ||||||||||||||| |||||||||||||    
T  32089763 aaacattttctacaaatcaatcaatttagtccttcaaaatgtttgttattatcggccaaattagtccctgcctacgtggcgtctgacatgtgagaggtta 32089862  T
Q  243 acggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||| |||||||||||| |||| |||||||||||    
T  32089863 acggccgcgtcagccccgttaacgctccgtttgaac 32089898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 20 - 278
Target Start/End: Complemental strand, 18726942 - 18726680
Alignment:
Q  20 attattggaagaaaattttga-gattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggaga 118  Q
    ||||||||| ||||||||| | |||| | |||||||||||||| |||||  ||||||||||||||||||||| | ||||||| |||| | |  |||| ||    
T  18726942 attattgga-gaaaattttcatgattatagagtgtagattacagattgtgtaattagggttccaattttatacaattggggaagaaagagctattgggga 18726844  T
Q  119 aggaagatagccattggggaagaagagcaa----tttcctgaaattcaatcaacttagtccttgaaaat-taggtcattatcggccaaattaatctctgt 213  Q
    || || | ||||||| || |||||   |||    |||  || || |||||||| ||||||||| ||||| |  || ||||||||  |||||| || |||     
T  18726843 agaaa-agagccatttggaaagaaagccaaaacattttatgcaaatcaatcaatttagtccttcaaaatgtttgttattatcggttaaattagtccctgc 18726745  T
Q  214 ctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||    
T  18726744 ctacgtggcgtctgacatgtgagaggttaacggccacgtcagccccgttaacgctccgtttgaac 18726680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 1344522 - 1344608
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    ||||||||||||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||| ||||    
T  1344522 aattattggaagaaattttggagattttggagtgtagattaaagattgtaaaattagggttccaattttatatatttagggaagaaa 1344608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 32836082 - 32835994
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| ||  || ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  32836082 attatcggccaaattagtccatgcctacgtggcgtctgacatgtgagaggttaacggccacgtcagccccgttaacgttctgtttgaac 32835994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 40330400 - 40330488
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| |||||| ||||||||||||||| |||||||||||| |||||||||||||| |||| |||| |||||||||||    
T  40330400 attatcggccaaattagtctctgcctacgtggcgtctgacatgtgagaggttgacggccacgtcagcaccgttaacgctccgtttgaac 40330488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 279 - 387
Target Start/End: Complemental strand, 24232315 - 24232207
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||||| | |||| || |||  |||||||| |||| ||||||||||||||||||||||||||||||  |||| |||||||||||    
T  24232315 tgagaggttaacggccacgtcaaccccgttaatgctttgtttgaacagaagtactaacttgattgacatttaacaaattcagaaattagattgatatttc 24232216  T
Q  379 gcataattg 387  Q
     ||||||||    
T  24232215 acataattg 24232207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 38176838 - 38176750
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| || ||| ||||||||||||||| ||||||||||||||||| |||||||||||||| |||  |||||||||||    
T  38176838 attatcggccaaattagtccctgcctacgtggcgtctgacatgtgagaggttaacggtcacgtcagccccgttaacactccgtttgaac 38176750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 38204062 - 38203974
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| || ||| ||||||||||||||| ||||||||||||||||| |||||||||||||| |||  |||||||||||    
T  38204062 attatcggccaaattagtccctgcctacgtggcgtctgacatgtgagaggttaacggtcacgtcagccccgttaacactccgtttgaac 38203974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 35291254 - 35291166
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| || ||||||| ||| ||||||| ||||||||||||||||||||||||||| |||| |||| ||| |||||||    
T  35291254 attatcggccaaattagtccctgtctatgtgtcgtctgacatgtgagaggttaacggccacgtcagctccgttaacgctccatttgaac 35291166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 43316986 - 43316898
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| || |||| || ||||||||||| ||||||||||||||||| ||||||||| |||| |||| |||||||||||    
T  43316986 attatcggccaaattagtccctgtttatgtggcgtctgacatgtgagaggttaacggtcacgtcagctccgttaacgctccgtttgaac 43316898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 24497789 - 24497894
Alignment:
Q  20 attattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggagaa 119  Q
    |||||||||||||| ||| |  |||||||||||||||||||  ||||||||||||| ||| ||||||||||||||| |||| |||||| || |||| |||    
T  24497789 attattggaagaaattttgggaattttggagtgtagattacttattgtaaaattagagtttcaattttatatatttagggaagaaatagccattggggaa 24497888  T
Q  120 ggaaga 125  Q
    | ||||    
T  24497889 gaaaga 24497894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 33257645 - 33257733
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgtcaacgttccgtttgaac 278  Q
    |||||||||||||||| || ||| |||||| |||||||| ||| ||||||||||||||||||||||||  || |||| |||||||||||    
T  33257645 attatcggccaaattagtccctgcctacgtagcgtctgacatgcgagaggttaacggccacgtcagccttgttaacgctccgtttgaac 33257733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 349 - 406
Target Start/End: Complemental strand, 35395426 - 35395369
Alignment:
Q  349 taacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgac 406  Q
    ||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||    
T  35395426 taacaaattcaggaactaaattgatatttcgcataattgagggacgaagttggccgac 35395369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 1343567 - 1343484
Alignment:
Q  22 tattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    |||||||||||| ||| ||||||||||||||||| ||| | ||| ||||||||||||  ||||||||||||||| |||| ||||    
T  1343567 tattggaagaaattttggagattttggagtgtagtttaaagattataaaattagggtgtcaattttatatatttagggaagaaa 1343484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 349 - 408
Target Start/End: Complemental strand, 38596961 - 38596902
Alignment:
Q  349 taacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgaccc 408  Q
    ||||||||||||||| ||| ||||||||||||||||||| |||||||| |||||||||||    
T  38596961 taacaaattcagggactaagttgatatttcgcataattgagggacgaatttggccgaccc 38596902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 191 - 261
Target Start/End: Complemental strand, 24232357 - 24232287
Alignment:
Q  191 ttatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgtcagccccgt 261  Q
    ||||||||||||||| ||  ||  |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  24232357 ttatcggccaaattagtccatgcttacgtggcgtctgacatgtgagaggttaacggccacgtcaaccccgt 24232287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 40330226 - 40330296
Alignment:
Q  20 attattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttata 90  Q
    ||||||||| |||| ||||| |||||||||||||||||| || |||||  |||||||||||||||||||||    
T  40330226 attattggaggaaatttttgtgattttggagtgtagattgcatattgtgtaattagggttccaattttata 40330296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 18728635 - 18728690
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgac 406  Q
    ||||||||||||| ||| ||||||||||||||||||  ||||||||||||||||||    
T  18728635 acaaattcagggactaagttgatatttcgcataattaagggacgaagttggccgac 18728690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 6116610 - 6116696
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    ||||| ||||||||| ||| | |||||| || ||||||||| | |||| |||||||||||| |||||||||| ||||||||| ||||    
T  6116610 aattaatggaagaaattttggggatttttgactgtagattagagattgaaaaattagggtttcaattttatagatttggggaagaaa 6116696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 279 - 393
Target Start/End: Original strand, 1344742 - 1344856
Alignment:
Q  279 tgagaggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttc 378  Q
    |||||||||||||| ||||| || || || |||  ||| |||| || || ||||||| ||||||||||||| ||||||||| ||| ||  ||||||||||    
T  1344742 tgagaggttaacggccacgtaagtacggttaacattccatttggacggagggactaaattgattgacattttacaaattcaaggactattttgatatttc 1344841  T
Q  379 gcataattgtgggac 393  Q
    | | ||||| |||||    
T  1344842 gtaaaattgggggac 1344856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 351 - 408
Target Start/End: Original strand, 43318093 - 43318150
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgaccc 408  Q
    ||||||||||||| ||| ||||||||||||||||||| |||| ||  |||||||||||    
T  43318093 acaaattcagggactaagttgatatttcgcataattgagggatgattttggccgaccc 43318150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 329 - 405
Target Start/End: Original strand, 40782187 - 40782263
Alignment:
Q  329 ggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccga 405  Q
    ||||||| |||||||||||||   ||||||||||| ||| ||||||||||| | ||||  |||||||| ||||||||    
T  40782187 ggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccga 40782263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 392
Target Start/End: Original strand, 24498045 - 24498108
Alignment:
Q  329 ggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcataattgtggga 392  Q
    ||||||| ||||||||||| | ||||||||||||| ||| ||||| | ||||||||||| ||||    
T  24498045 ggactaaattgattgacatatgacaaattcagggactaatttgatttatcgcataattgaggga 24498108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 33256491 - 33256436
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgac 406  Q
    |||||||||  |||||| |||||||||||||||||||  ||| |||||||||||||    
T  33256491 acaaattcaaagattaagttgatatttcgcataattgaaggatgaagttggccgac 33256436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 410
Target Start/End: Original strand, 38178126 - 38178185
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||||  | ||||||||||||||||||||||| |||| ||| ||| |||||||||    
T  38178126 acaaattcagatactaaattgatatttcgcataattgagggatgaatttgaccgacccgt 38178185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 410
Target Start/End: Original strand, 38205350 - 38205409
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    ||||||||||  | ||||||||||||||||||||||| |||| ||| ||| |||||||||    
T  38205350 acaaattcagatactaaattgatatttcgcataattgagggatgaatttgaccgacccgt 38205409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 351 - 393
Target Start/End: Complemental strand, 24496834 - 24496792
Alignment:
Q  351 acaaattcagggattaaattgatatttcgcataattgtgggac 393  Q
    ||||||||||||||||| |||||||||| |||||||| |||||    
T  24496834 acaaattcagggattaatttgatatttcacataattgagggac 24496792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 27350259 - 27350337
Alignment:
Q  42 attttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaataacctttggagaag 120  Q
    ||||||| ||||  |||| | ||| |||||||||||||||||||||||| ||||||| | |||||| || |||| ||||    
T  27350259 attttggcgtgtgaattaaagattataaaattagggttccaattttatacatttgggaaagaaatagccattggggaag 27350337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 48; Significance: 5e-18; HSPs: 5)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 283 - 386
Target Start/End: Original strand, 2823 - 2926
Alignment:
Q  283 aggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcat 382  Q
    |||||||||  ||||| |||||| | ||| ||||| |||||  ||||||||||||||| |||||||| ||||||||| ||||||||||| |||||| |||    
T  2823 aggttaacgaccacgttagcaccattaacactccggttgaatagaaggactaacttgaatgacatttgacaaattcaaggattaaattgttatttctcat 2922  T
Q  383 aatt 386  Q
    ||||    
T  2923 aatt 2926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 284 - 401
Target Start/End: Complemental strand, 2252 - 2139
Alignment:
Q  284 ggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgacatttaacaaattcagggattaaattgatatttcgcata 383  Q
    ||||||||  |||||||||||||| ||||| |||    |||  || |||||||||||||||| | | ||||||| ||||||||| |||||||||||||||    
T  2252 ggttaacgaccacgtcagcaccgttaacgccccg----aacaaaaagactaacttgattgacgtctgacaaatttagggattaagttgatatttcgcata 2157  T
Q  384 attgtgggacgaagttgg 401  Q
    |||| |||| ||| ||||    
T  2156 attgagggatgaatttgg 2139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 2642 - 2706
Alignment:
Q  41 gattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    ||||||||||||||||||||| || ||| |||||| |||||| ||||||||||||||||| ||||    
T  2642 gattttggagtgtagattacatatagtataattagagttccagttttatatatttggggaagaaa 2706  T

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Target: scaffold1041; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 2423 - 2360
Alignment:
Q  42 attttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    |||||||||||||||||||  || ||| ||| ||||||||||||||||||||||||||| ||||    
T  2423 attttggagtgtagattactgatagtataatgagggttccaattttatatatttggggaagaaa 2360  T

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Target: scaffold1041; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 2776 - 2838
Alignment:
Q  190 attatcggccaaattaatctctgtctacgtggcgtctgatatgtgagaggttaacggccacgt 252  Q
    |||||||||||||||| || ||| ||| ||||||||||| |||||| ||||||||| ||||||    
T  2776 attatcggccaaattagtcactgcctatgtggcgtctgacatgtgaaaggttaacgaccacgt 2838  T

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Target: scaffold0477 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 353 - 410
Target Start/End: Original strand, 6669 - 6726
Alignment:
Q  353 aaattcagggattaaattgatatttcgcataattgtgggacgaagttggccgacccgt 410  Q
    |||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||    
T  6669 aaattcagggattaaattgatatttcacataattgagggacgaatttggccgacccgt 6726  T

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Target: scaffold0070 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 57758 - 57673
Alignment:
Q  20 attattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 105  Q
    |||||| ||||||| ||| |  |||||||||||||||||||| || ||| ||| |||||| |||||||||||||||||||| ||||    
T  57758 attattcgaagaaattttggttattttggagtgtagattacagatagtataatcagggtttcaattttatatatttggggaagaaa 57673  T

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Target: scaffold0070; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 57559 - 57498
Alignment:
Q  284 ggttaacggtcacgtcagcaccgtcaacgctccgtttgaactgaaggactaacttgattgac 345  Q
    ||||||||  |||||||||||||| ||||| ||| |||||| ||| ||||||||||||||||    
T  57559 ggttaacgaccacgtcagcaccgttaacgccccgattgaacagaaagactaacttgattgac 57498  T

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Target: scaffold0006 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 37998 - 38079
Alignment:
Q  19 aattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttgggga 100  Q
    ||||||||||||||  ||| |  |||||||||||| |||||   |||||||||||||||||||||||||||| |||||||||    
T  37998 aattattggaagaatttttgggaattttggagtgtggattaatgattgtaaaattagggttccaattttatacatttgggga 38079  T

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Target: scaffold0597 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 493 - 534
Target Start/End: Complemental strand, 9087 - 9046
Alignment:
Q  493 ggcgcagtggccgaccaccacaaggtggcggcgccgccgccg 534  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  9087 ggcgcagtggccggccacctcaaggtggcggcgccgccgccg 9046  T

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Target: scaffold1848 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1848
Description:

Target: scaffold1848; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 493 - 534
Target Start/End: Complemental strand, 514 - 473
Alignment:
Q  493 ggcgcagtggccgaccaccacaaggtggcggcgccgccgccg 534  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||    
T  514 ggcgcggtggccggccacctcaaggtggcggcgccgccgccg 473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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