View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14295_high_32 (Length: 294)

Name: NF14295_high_32
Description: NF14295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14295_high_32
NF14295_high_32
[»] chr3 (7 HSPs)
chr3 (19-215)||(9464719-9464915)
chr3 (33-215)||(54158773-54158953)
chr3 (113-200)||(44311267-44311354)
chr3 (167-216)||(9466212-9466261)
chr3 (142-187)||(36740906-36740951)
chr3 (142-189)||(38628123-38628170)
chr3 (112-187)||(54174631-54174706)
[»] chr2 (4 HSPs)
chr2 (37-215)||(9440317-9440496)
chr2 (106-192)||(5775871-5775957)
chr2 (142-187)||(9622089-9622134)
chr2 (126-187)||(12226317-12226378)
[»] chr4 (7 HSPs)
chr4 (31-209)||(41865474-41865652)
chr4 (33-137)||(49621784-49621888)
chr4 (112-187)||(41234850-41234925)
chr4 (145-187)||(13463943-13463985)
chr4 (142-187)||(38062819-38062864)
chr4 (109-189)||(1376076-1376156)
chr4 (146-187)||(43019189-43019230)
[»] chr5 (4 HSPs)
chr5 (106-215)||(24544028-24544137)
chr5 (106-192)||(7493371-7493457)
chr5 (112-187)||(41962090-41962165)
chr5 (142-187)||(25668833-25668878)
[»] chr1 (3 HSPs)
chr1 (106-215)||(33980156-33980265)
chr1 (106-200)||(7549520-7549614)
chr1 (145-187)||(17644284-17644326)
[»] scaffold0050 (1 HSPs)
scaffold0050 (33-187)||(61592-61745)
[»] chr7 (4 HSPs)
chr7 (142-187)||(4305112-4305157)
chr7 (145-187)||(6733425-6733467)
chr7 (145-215)||(8951640-8951710)
chr7 (151-187)||(37698163-37698199)
[»] chr6 (3 HSPs)
chr6 (109-184)||(22967649-22967724)
chr6 (109-184)||(23820669-23820744)
chr6 (125-187)||(4211275-4211338)


Alignment Details
Target: chr3 (Bit Score: 173; Significance: 5e-93; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 9464915 - 9464719
Alignment:
Q  19 atactaaaaaatcgtaaatataattacatataatgtgggggtgactttgcaaataatacattgtttcacataaacttgctaaagagttaacccttcttta 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |    
T  9464915 atactaaaaaatcgtaaatataattacatataatgtgggggtgactttgcaaataatacattgtatcacataaacttgctaaagagttaacctttcttca 9464816  T
Q  119 atcctagccattgaataaaatactaatatatcaatggtgaaaaactcatttttgtatgatacacaaaaatagttacttgtgttggttaaatgccacc 215  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  9464815 atcctaaccattgaataaaatactaatatatcaatggtgaaaaactcatttttgtatgatacacaaaaagagttacttgtgtaggttaaatgccacc 9464719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 215
Target Start/End: Complemental strand, 54158953 - 54158773
Alignment:
Q  33 taaatataattacatataatgtgggggtgactttgcaaataatacattgtttcacataaacttgctaaagagttaacccttctttaatcctagccattga 132  Q
    |||| ||||||||||||||| ||||| ||||  ||||||||| |||  || || ||||||||   ||| ||| |||||||||||||||||| ||||||||    
T  54158953 taaaaataattacatataatatgggg-tgacaatgcaaataacacacagtatcccataaactcattaaggaggtaacccttctttaatcctggccattga 54158855  T
Q  133 ataaaatactaatatatcaatggtgaaaaactcatttttgtatgatacacaaaaatagttacttgtgttggttaaatgccacc 215  Q
    ||||||||  |||||||||||||||||||  |||||| |||||| ||||| |||| ||| ||||||||  | |||||||||||    
T  54158854 ataaaatatgaatatatcaatggtgaaaagttcatttatgtatggtacac-aaaagagtgacttgtgtatgctaaatgccacc 54158773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 200
Target Start/End: Original strand, 44311267 - 44311354
Alignment:
Q  113 tctttaatcctagccattgaataaaatactaatatatcaatggtgaaaaactcatttttgtatgatacacaaaaatagttacttgtgt 200  Q
    ||||||||| ||||  |||||||||||||||||||||||||||| ||||  | | ||||||||| |||||||||| | ||||||||||    
T  44311267 tctttaatcatagctgttgaataaaatactaatatatcaatggtcaaaagtttacttttgtatggtacacaaaaacatttacttgtgt 44311354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 9466212 - 9466261
Alignment:
Q  167 tttttgtatgatacacaaaaatagttacttgtgttggttaaatgccacca 216  Q
    |||||||||| |||||||||| |||||||||||| |||||||||||||||    
T  9466212 tttttgtatggtacacaaaaagagttacttgtgtaggttaaatgccacca 9466261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 36740906 - 36740951
Alignment:
Q  142 taatatatcaatggtgaaaaactcatttttgtatgatacacaaaaa 187  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||    
T  36740906 taatatatcaatggtgaaaaacttatttgtgtatgatacacaaaaa 36740951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 38628123 - 38628170
Alignment:
Q  142 taatatatcaatggtgaaaaactcatttttgtatgatacacaaaaata 189  Q
    ||||||||||| ||||||||||||| ||||||||| ||| ||||||||    
T  38628123 taatatatcaaaggtgaaaaactcacttttgtatggtacccaaaaata 38628170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 187
Target Start/End: Original strand, 54174631 - 54174706
Alignment:
Q  112 ttctttaatcctagccattgaataaaatactaatatatcaatggtgaaaaactcatttttgtatgatacacaaaaa 187  Q
    ||||| |||| |||||||||||| |  || ||||||||||||| | |||||| | |||||||||| ||||||||||    
T  54174631 ttcttcaatcttagccattgaattatttaataatatatcaatgataaaaaacacctttttgtatggtacacaaaaa 54174706  T

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Target: chr2 (Bit Score: 92; Significance: 1e-44; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 37 - 215
Target Start/End: Original strand, 9440317 - 9440496
Alignment:
Q  37 tataattacatataatgtgggggtgactttgcaaata-atacattgtttcacataaacttgctaaagagttaacccttctttaatcctagccattgaata 135  Q
    |||||||| ||| ||| ||| ||| || ||||||||| | ||||||  |||||||||||| ||||| || |||||||||| |||||||||||||||||||    
T  9440317 tataattatataaaatttggtggtaacattgcaaatacacacattgcatcacataaacttactaaaaaggtaacccttctctaatcctagccattgaata 9440416  T
Q  136 aaatactaatatatcaatggtgaaaaactcatttttgtatgatacacaaaaatagttacttgtgttggttaaatgccacc 215  Q
    ||||||||||||||||||||||||||  |||||| ||||||||||||||||| ||||||||||||  |||||||| ||||    
T  9440417 aaatactaatatatcaatggtgaaaagttcatttgtgtatgatacacaaaaagagttacttgtgtatgttaaatgtcacc 9440496  T

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Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 192
Target Start/End: Complemental strand, 5775957 - 5775871
Alignment:
Q  106 taacccttctttaatcctagccattgaataaaatactaatatatcaatggtgaaaaactcatttttgtatgatacacaaaaatagtt 192  Q
    |||||| ||||||||| |  |||||||||||||||||| |||||||||||||||||  ||| |||||||||||||||||||| ||||    
T  5775957 taacccatctttaatcttgaccattgaataaaatactattatatcaatggtgaaaagttcacttttgtatgatacacaaaaagagtt 5775871  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 9622134 - 9622089
Alignment:
Q  142 taatatatcaatggtgaaaaactcatttttgtatgatacacaaaaa 187  Q
    ||||| ||||||||| ||| |||||||||||||| |||||||||||    
T  9622134 taataaatcaatggtaaaatactcatttttgtatcatacacaaaaa 9622089  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 12226378 - 12226317
Alignment:
Q  126 ccattgaataaaatactaatatatcaatggtgaaaaactcatttttgtatgatacacaaaaa 187  Q
    |||||||||||  || ||||| ||||||||||||||  |||||||||||  |||||||||||    
T  12226378 ccattgaataatttaataataaatcaatggtgaaaagttcatttttgtaccatacacaaaaa 12226317  T

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Target: chr4 (Bit Score: 84; Significance: 6e-40; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 31 - 209
Target Start/End: Original strand, 41865474 - 41865652
Alignment:
Q  31 cgtaaatataattacatataatgtgggggtgactttgcaaata-atacattgtttcacataaacttgctaaagagttaacccttctttaatcctagccat 129  Q
    ||||||||||||| ||||| || |||||||||  ||||||||| | ||||||| |||||||| ||  |||||||| |||||||||||||||| | |||||    
T  41865474 cgtaaatataattgcatattatttgggggtgatgttgcaaatacacacattgtatcacataaccta-ctaaagaggtaacccttctttaatcttggccat 41865572  T
Q  130 tgaataaaatactaatatatcaatggtgaaaaactcatttttgtatgatacacaaaaatagttacttgtgttggttaaat 209  Q
    |||||||||||  |||| |||||||||||||||  |||||| |||||||||||||||| |||||||||||| ||||||||    
T  41865573 tgaataaaataagaataaatcaatggtgaaaaaaccattttagtatgatacacaaaaagagttacttgtgtaggttaaat 41865652  T

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Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 137
Target Start/End: Complemental strand, 49621888 - 49621784
Alignment:
Q  33 taaatataattacatataatgtgggggtgactttgcaaata-atacattgtttcacataaacttgctaaagagttaacccttctttaatcctagccattg 131  Q
    |||||||||||||||||||| ||||| | || ||||||||| | ||||||  |||||||||| |  ||||||| |||||||||| |||||||||||||||    
T  49621888 taaatataattacatataatttgggg-taacattgcaaatacacacattgcatcacataaacctattaaagaggtaacccttctctaatcctagccattg 49621790  T
Q  132 aataaa 137  Q
    ||||||    
T  49621789 aataaa 49621784  T

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Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 187
Target Start/End: Original strand, 41234850 - 41234925
Alignment:
Q  112 ttctttaatcctagccattgaataaaatactaatatatcaatggtgaaaaactcatttttgtatgatacacaaaaa 187  Q
    |||||||||| ||||||||||||    || ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  41234850 ttctttaatcttagccattgaattttttaataatatatcaatggtgaaaaactcacttttgtatgatacccaaaaa 41234925  T

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Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 187
Target Start/End: Original strand, 13463943 - 13463985
Alignment:
Q  145 tatatcaatggtgaaaaactcatttttgtatgatacacaaaaa 187  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  13463943 tatatcaatggtgaaaaacacatttttgtatgatacacaaaaa 13463985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 38062864 - 38062819
Alignment:
Q  142 taatatatcaatggtgaaaaactcatttttgtatgatacacaaaaa 187  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||    
T  38062864 taatatattaatggtgaaaaactcatttgtgtatgatacacaaaaa 38062819  T

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Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 1376156 - 1376076
Alignment:
Q  109 cccttctttaatcctagccattgaataaaatactaatatatcaatggtgaaaaactcatttttgtatgatacacaaaaata 189  Q
    ||||||||||||| || ||||||||||   || ||||| ||||||||| ||||||||||||||| |  |||||||| ||||    
T  1376156 cccttctttaatcttaaccattgaatagtttaataataaatcaatggtaaaaaactcatttttgcaccatacacaagaata 1376076  T

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Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 43019189 - 43019230
Alignment:
Q  146 atatcaatggtgaaaaactcatttttgtatgatacacaaaaa 187  Q
    ||||||||||||||||||||| ||||||||| ||| ||||||    
T  43019189 atatcaatggtgaaaaactcacttttgtatggtacccaaaaa 43019230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 215
Target Start/End: Complemental strand, 24544137 - 24544028
Alignment:
Q  106 taacccttctttaatcctagccattgaataaaatactaatatatcaatggtgaaaaactcatttttgtatgatacacaaaaatagttacttgtgttggtt 205  Q
    |||||| ||||||||| |  ||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||| ||||  ||||||  | |    
T  24544137 taacccatctttaatcttgaccattgaataaaatactaatatatcaatggtgaaaagttcacttttgtatgatacacaaaaagagtttgttgtgtatgct 24544038  T
Q  206 aaatgccacc 215  Q
    ||||||||||    
T  24544037 aaatgccacc 24544028  T

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Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 192
Target Start/End: Complemental strand, 7493457 - 7493371
Alignment:
Q  106 taacccttctttaatcctagccattgaataaaatactaatatatcaatggtgaaaaactcatttttgtatgatacacaaaaatagtt 192  Q
    |||||| ||||||||| |  ||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||| ||||    
T  7493457 taacccatctttaatcttgaccattgaataaaatactaatatatcaatggtgaaaagttcacttttgtatgatacacaaaaagagtt 7493371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 187
Target Start/End: Original strand, 41962090 - 41962165
Alignment:
Q  112 ttctttaatcctagccattgaataaaatactaatatatcaatggtgaaaaactcatttttgtatgatacacaaaaa 187  Q
    |||||||||| ||||||||||||    || ||||||||||||||||||||||||| |||||||| |||| ||||||    
T  41962090 ttctttaatcttagccattgaattttttaataatatatcaatggtgaaaaactcacttttgtataatacccaaaaa 41962165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 25668878 - 25668833
Alignment:
Q  142 taatatatcaatggtgaaaaactcatttttgtatgatacacaaaaa 187  Q
    ||||| ||||||||| ||| |||||||||||||| |||||||||||    
T  25668878 taataaatcaatggtaaaatactcatttttgtatcatacacaaaaa 25668833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 106 - 215
Target Start/End: Original strand, 33980156 - 33980265
Alignment:
Q  106 taacccttctttaatcctagccattgaataaaatactaatatatcaatggtgaaaaactcatttttgtatgatacacaaaaatagttacttgtgttggtt 205  Q
    |||||| ||||||||| |  |||||||||||||||||| |||||||||||||||||  ||| |||||||||||||||||||| ||||  ||||||  | |    
T  33980156 taacccatctttaatcttgaccattgaataaaatactattatatcaatggtgaaaagttcacttttgtatgatacacaaaaagagtttgttgtgtatgct 33980255  T
Q  206 aaatgccacc 215  Q
    ||||||||||    
T  33980256 aaatgccacc 33980265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 200
Target Start/End: Original strand, 7549520 - 7549614
Alignment:
Q  106 taacccttctttaatcctagccattgaataaaatactaatatatcaatggtgaaaaactcatttttgtatgatacacaaaaatagttacttgtgt 200  Q
    ||||| |||||||||| | ||||||||||    || ||||||||||||||| |||||  ||||| ||||||||||||||||| | | ||||||||    
T  7549520 taaccattctttaatcttggccattgaattgtttaataatatatcaatggtaaaaaatacatttgtgtatgatacacaaaaagattgacttgtgt 7549614  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 187
Target Start/End: Original strand, 17644284 - 17644326
Alignment:
Q  145 tatatcaatggtgaaaaactcatttttgtatgatacacaaaaa 187  Q
    |||||||||| |||||| | |||||||||||||||||||||||    
T  17644284 tatatcaatgatgaaaagcacatttttgtatgatacacaaaaa 17644326  T

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Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 61745 - 61592
Alignment:
Q  33 taaatataattacatataatgtgggggtgactttgcaaataatacattgtttcacataaacttgctaaagagttaacccttctttaatcctagccattga 132  Q
    |||||| ||||||||||||| | |||||||| ||| |||||  ||||  | ||||| |||| | ||||  || | |||| ||| ||||| || ||| |||    
T  61745 taaataaaattacatataattttggggtgacattgtaaatac-acataatatcacacaaacctactaagaaggtgacccatctctaatcataaccactga 61647  T
Q  133 ataaaatactaatatatcaatggtgaaaaactcatttttgtatgatacacaaaaa 187  Q
    |||||||||||||||||||||||| ||||  | |||| |||||||||| ||||||    
T  61646 ataaaatactaatatatcaatggttaaaagtttatttgtgtatgatacccaaaaa 61592  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 4305112 - 4305157
Alignment:
Q  142 taatatatcaatggtgaaaaactcatttttgtatgatacacaaaaa 187  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||    
T  4305112 taatatattaatggtgaaaaactcatttgtgtatgatacacaaaaa 4305157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 187
Target Start/End: Original strand, 6733425 - 6733467
Alignment:
Q  145 tatatcaatggtgaaaaactcatttttgtatgatacacaaaaa 187  Q
    |||||||||| |||||||| |||||||||||||||||||||||    
T  6733425 tatatcaatgatgaaaaacacatttttgtatgatacacaaaaa 6733467  T

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Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 8951640 - 8951710
Alignment:
Q  145 tatatcaatggtgaaaaactcatttttgtatgatacacaaaaatagttacttgtgttggttaaatgccacc 215  Q
    |||||||||||||||||||||| |||| |||||||| |||||| |   ||||||||  |||||||||||||    
T  8951640 tatatcaatggtgaaaaactcacttttatatgatacccaaaaacatagacttgtgtatgttaaatgccacc 8951710  T

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Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 37698199 - 37698163
Alignment:
Q  151 aatggtgaaaaactcatttttgtatgatacacaaaaa 187  Q
    |||||| ||||||||||||||||||||||||||||||    
T  37698199 aatggtaaaaaactcatttttgtatgatacacaaaaa 37698163  T

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Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 22967724 - 22967649
Alignment:
Q  109 cccttctttaatcctagccattgaataaaatactaatatatcaatggtgaaaaactcatttttgtatgatacacaa 184  Q
    ||||||||||||| || |||||||||||  || ||||| ||||||| | |||| ||||||||||||| ||||||||    
T  22967724 cccttctttaatcttaaccattgaataatttaataataaatcaatgataaaaagctcatttttgtatcatacacaa 22967649  T

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Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 184
Target Start/End: Original strand, 23820669 - 23820744
Alignment:
Q  109 cccttctttaatcctagccattgaataaaatactaatatatcaatggtgaaaaactcatttttgtatgatacacaa 184  Q
    ||||||||||||| || |||||||||||  || ||||| ||||||| | |||| ||||||||||||| ||||||||    
T  23820669 cccttctttaatcttaaccattgaataatttaataataaatcaatgataaaaagctcatttttgtatcatacacaa 23820744  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 4211275 - 4211338
Alignment:
Q  125 gccattgaataaaatactaatat-atcaatggtgaaaaactcatttttgtatgatacacaaaaa 187  Q
    |||||| |||||||||||||||| |||||||||||| |  |||||| |||||| ||||||||||    
T  4211275 gccattaaataaaatactaatataatcaatggtgaatagttcatttgtgtatggtacacaaaaa 4211338  T

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