View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14295_high_40 (Length: 252)
Name: NF14295_high_40
Description: NF14295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14295_high_40 |
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Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 3918814 - 3919041
Alignment:
| Q |
11 |
aatatgaaaggtgcaagtaaccaaatttgttgtacttttctgtttggtagcacacaagattgatgtaatgaagttaaggtaatgggaccattgagcagag |
110 |
Q |
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| T |
3918814 |
aatatgaaaggtgcaagtaaccaaatttgttgtacttttctgtttggtagcacacaagattgatgtaatgaagttaaggtaatgggaccattgagcagag |
3918913 |
T |
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| Q |
111 |
tggggtagataggtgttaatggtattagtgcataatgtgtgaacagcaataatgcactgaattttttagctggcttgaatcagtacttgtctgaatactg |
210 |
Q |
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| T |
3918914 |
tggggtagataggtgttaatggtattagtgcataatgtgtgaacagcaataatgcactgaattttttagctggcttgaatcagtacttgtctgaatactg |
3919013 |
T |
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| Q |
211 |
gcagtatttcagaagggggtatcaattg |
238 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
3919014 |
gcagtatttcagaagggggtatcaattg |
3919041 |
T |
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