View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14295_high_49 (Length: 223)
Name: NF14295_high_49
Description: NF14295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14295_high_49 |
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Alignment Details
Target: chr3 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 9465383 - 9465536
Alignment:
| Q |
48 |
tcagcaatgaagatgagctgaggaaatgaggttaacaacacaatatccttttgttgcttgaattgaaccgtaaataaaaaatacaagttgaa-gttcaca |
146 |
Q |
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| T |
9465383 |
tcagcaatgaagatgagctgaggaaatga--------acacaatatccttttgttgcttgaattgaaccgaaaataaaaaatacaaattgaaagttcaca |
9465474 |
T |
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| Q |
147 |
gaaattgaaattctgataagaagtccaacatgttctttgcatcagaaaaattggtatgtatt |
208 |
Q |
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| T |
9465475 |
gaaattgaaattcagataagaagtccaacgtgttctttgcatcagaaaaattgatatgtatt |
9465536 |
T |
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