View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14295_low_18 (Length: 420)
Name: NF14295_low_18
Description: NF14295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14295_low_18 |
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Alignment Details
Target: chr8 (Bit Score: 360; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 28 - 410
Target Start/End: Original strand, 32326181 - 32326566
Alignment:
| Q |
28 |
ttgttgaggaatatttagagatgttttaactccccgcatgatcacccaatattggagatgctccaattcttcactgcatgatca---tccaatgttggag |
124 |
Q |
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| T |
32326181 |
ttgttgaggaatatttagagatgttttaactccccgcatgatcacccaatattagagatgctccaattctccactgcatgatcaatatccaatgttggag |
32326280 |
T |
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| Q |
125 |
atacttcaactcctagcaaattctcccatttatagtaagaatatagatggcaatactttccaattacttgagtgatatgcacttttgtctttgttcatgg |
224 |
Q |
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| T |
32326281 |
atacttcaactcctagcaaattctcccatttatagtaagaatatagatggcaatactttccaattacttgagtgatatgcacttttgtctttgttcatgg |
32326380 |
T |
|
| Q |
225 |
tgatatcgtaattaaaatacaagttatcaacaaatttgtgtggaaaagttgtaacgcggctttccttaaaaaatcacattcatagggtcatctatttgaa |
324 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32326381 |
tgatatcgtaattaaaatacaagttatcaacaaatttgtgtggaaaagttgtaacgcggctttccttaaaaaatcacattcatagggtcatctatttgaa |
32326480 |
T |
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| Q |
325 |
agataatccaacttagtcttaaaaatcaaacgtgccaatggcaatcaaaattttagcttcataattgatttatatggtagcctatg |
410 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
32326481 |
agataatccaacttagtcttaaaaatcaaacgtgccaatggcaatcaaaattttagattcataattgatttatatggtagcctatg |
32326566 |
T |
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