View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14295_low_55 (Length: 211)
Name: NF14295_low_55
Description: NF14295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14295_low_55 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 18 - 192
Target Start/End: Original strand, 36659906 - 36660080
Alignment:
| Q |
18 |
gaagggacaaattgatctcccgtaaaaaggacaaactaatctctttatgtttagactaatgtgttgttctcattttctctaaactataaaattgcattgt |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
36659906 |
gaagggacaaattgatctcccgtaaaaaggacaaactaatccctttatgtttagaccaatgtgttgttcccattttctctaaactataaaattgcattgt |
36660005 |
T |
|
| Q |
118 |
cgttccattcaaattaagtatgttcttttgcttcaagtccatttcattactgaattatacgttaaacaaggaata |
192 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
36660006 |
cgttctattcaaattaagtatattcttttgcttcaagtccatttcattactgaattatatgttaaataaggaata |
36660080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University