View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14295_low_57 (Length: 204)
Name: NF14295_low_57
Description: NF14295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14295_low_57 |
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Alignment Details
Target: chr8 (Bit Score: 132; Significance: 9e-69; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 29 - 185
Target Start/End: Complemental strand, 32325792 - 32325630
Alignment:
| Q |
29 |
gtgtaaagatttaatttgattatagaaaaacaaaattattttcctcatgaaagtgggaaatatacgtccaaacgaggtcgtgaaaacaccaatgaaaagc |
128 |
Q |
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| T |
32325792 |
gtgtaaagatttaatttgattatagaaaaacaaaattattttcctcatgaaagtgggaaatatacgtccaaacgaggtcgtgaaaacaccaatgtaaagc |
32325693 |
T |
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| Q |
129 |
taaaaaat------cagaaccaaagccacaaggaaagaaacgttgctttccttattttctttc |
185 |
Q |
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|||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32325692 |
taaaaaatcatagacataaccaaagccacaaggaaagaaacgttgctttccttattttctttc |
32325630 |
T |
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