View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14296_high_1 (Length: 665)

Name: NF14296_high_1
Description: NF14296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14296_high_1
NF14296_high_1
[»] chr5 (73 HSPs)
chr5 (141-374)||(39776856-39777088)
chr5 (490-648)||(39776617-39776772)
chr5 (491-636)||(38916368-38916513)
chr5 (516-636)||(30355017-30355136)
chr5 (43-174)||(291100-291231)
chr5 (516-635)||(978077-978196)
chr5 (516-636)||(33387219-33387339)
chr5 (516-635)||(9502770-9502889)
chr5 (516-636)||(8086173-8086293)
chr5 (39-170)||(12913802-12913933)
chr5 (43-170)||(19655161-19655288)
chr5 (516-624)||(14634300-14634408)
chr5 (68-170)||(16971172-16971274)
chr5 (68-169)||(3899867-3899968)
chr5 (57-170)||(29699384-29699497)
chr5 (516-624)||(33587612-33587720)
chr5 (519-604)||(11251145-11251230)
chr5 (516-635)||(24992281-24992400)
chr5 (516-635)||(40156198-40156317)
chr5 (92-170)||(2953242-2953320)
chr5 (48-150)||(16439146-16439248)
chr5 (97-170)||(2093945-2094018)
chr5 (516-624)||(3472420-3472528)
chr5 (516-638)||(18094224-18094346)
chr5 (68-169)||(26662427-26662529)
chr5 (68-169)||(26934022-26934124)
chr5 (68-170)||(28818945-28819047)
chr5 (44-174)||(30117832-30117962)
chr5 (516-573)||(11761128-11761185)
chr5 (494-562)||(32400400-32400468)
chr5 (39-150)||(3180088-3180198)
chr5 (516-635)||(12007775-12007894)
chr5 (516-625)||(11785868-11785978)
chr5 (526-620)||(13812062-13812156)
chr5 (516-573)||(7224227-7224284)
chr5 (516-565)||(9050719-9050768)
chr5 (522-638)||(34111959-34112075)
chr5 (518-573)||(32017275-32017330)
chr5 (400-443)||(39776826-39776869)
chr5 (68-150)||(16802472-16802554)
chr5 (516-578)||(18998744-18998806)
chr5 (537-591)||(35825006-35825060)
chr5 (43-124)||(19598335-19598416)
chr5 (516-573)||(26387022-26387079)
chr5 (518-562)||(3422355-3422399)
chr5 (43-102)||(16971220-16971279)
chr5 (121-168)||(32485630-32485677)
chr5 (533-624)||(37495621-37495712)
chr5 (516-573)||(12447561-12447616)
chr5 (43-89)||(13312267-13312313)
chr5 (523-576)||(20692541-20692592)
chr5 (516-562)||(24916389-24916435)
chr5 (516-566)||(27109757-27109807)
chr5 (78-170)||(2356312-2356401)
chr5 (133-170)||(13312272-13312309)
chr5 (532-624)||(25330234-25330325)
chr5 (33-130)||(39031199-39031296)
chr5 (116-176)||(16439140-16439200)
chr5 (522-562)||(27579579-27579619)
chr5 (519-599)||(40267941-40268020)
chr5 (43-102)||(2953266-2953325)
chr5 (43-102)||(3899915-3899974)
chr5 (519-638)||(5947697-5947816)
chr5 (516-567)||(12456783-12456834)
chr5 (559-638)||(18598541-18598620)
chr5 (516-562)||(12359964-12360010)
chr5 (116-170)||(19598340-19598394)
chr5 (66-140)||(38134411-38134485)
chr5 (36-89)||(12913892-12913945)
chr5 (127-176)||(39031238-39031287)
chr5 (494-550)||(2825242-2825298)
chr5 (553-625)||(7750066-7750138)
chr5 (43-87)||(22083001-22083045)
[»] chr1 (86 HSPs)
chr1 (516-640)||(11641210-11641334)
chr1 (43-170)||(48993925-48994052)
chr1 (516-636)||(6402553-6402673)
chr1 (43-176)||(29179599-29179732)
chr1 (516-637)||(36757629-36757750)
chr1 (39-150)||(9157309-9157420)
chr1 (43-170)||(32540756-32540883)
chr1 (516-638)||(40771915-40772037)
chr1 (495-624)||(28030803-28030932)
chr1 (519-638)||(6766369-6766488)
chr1 (43-174)||(17127568-17127699)
chr1 (516-640)||(16120583-16120707)
chr1 (43-170)||(5995372-5995499)
chr1 (516-637)||(30003531-30003652)
chr1 (491-636)||(44647831-44647976)
chr1 (516-636)||(17305953-17306073)
chr1 (66-170)||(33219599-33219703)
chr1 (493-625)||(38153397-38153529)
chr1 (516-636)||(42788685-42788805)
chr1 (519-638)||(27292637-27292756)
chr1 (43-150)||(37155049-37155156)
chr1 (33-130)||(36290455-36290552)
chr1 (516-637)||(24321257-24321380)
chr1 (516-636)||(30701717-30701837)
chr1 (516-621)||(40977631-40977736)
chr1 (516-624)||(36399109-36399217)
chr1 (36-124)||(44706838-44706926)
chr1 (39-150)||(4608995-4609106)
chr1 (516-638)||(26910073-26910195)
chr1 (43-140)||(1091582-1091679)
chr1 (516-636)||(52024025-52024145)
chr1 (92-170)||(15220863-15220941)
chr1 (68-170)||(29371396-29371498)
chr1 (47-149)||(45728294-45728396)
chr1 (66-152)||(46333972-46334058)
chr1 (43-116)||(21630045-21630118)
chr1 (516-624)||(42735308-42735419)
chr1 (516-620)||(3485350-3485454)
chr1 (516-624)||(9342788-9342896)
chr1 (516-624)||(15382569-15382677)
chr1 (519-635)||(30385291-30385407)
chr1 (494-589)||(14777078-14777173)
chr1 (523-606)||(48375031-48375114)
chr1 (68-170)||(49444921-49445021)
chr1 (516-622)||(15912479-15912585)
chr1 (97-150)||(1819517-1819570)
chr1 (31-111)||(28395628-28395708)
chr1 (528-636)||(44644510-44644618)
chr1 (516-567)||(22575730-22575781)
chr1 (43-150)||(48498418-48498525)
chr1 (68-150)||(5694918-5694999)
chr1 (68-150)||(8337879-8337961)
chr1 (491-637)||(19711810-19711952)
chr1 (516-572)||(31444986-31445042)
chr1 (516-635)||(40800530-40800649)
chr1 (83-150)||(741530-741597)
chr1 (519-606)||(4302147-4302234)
chr1 (510-577)||(9881334-9881401)
chr1 (43-102)||(48993920-48993979)
chr1 (494-597)||(323951-324056)
chr1 (68-150)||(34062237-34062319)
chr1 (72-150)||(47303427-47303505)
chr1 (68-150)||(48604975-48605057)
chr1 (516-549)||(25171240-25171273)
chr1 (39-102)||(17127563-17127626)
chr1 (39-102)||(29371444-29371507)
chr1 (522-573)||(32898572-32898623)
chr1 (519-590)||(42367442-42367513)
chr1 (43-102)||(49444916-49444975)
chr1 (116-170)||(9157318-9157372)
chr1 (116-166)||(21630054-21630104)
chr1 (44-102)||(29179601-29179659)
chr1 (523-577)||(34634965-34635019)
chr1 (116-170)||(45728295-45728349)
chr1 (116-170)||(48993993-48994047)
chr1 (43-88)||(5995459-5995504)
chr1 (516-565)||(7568629-7568678)
chr1 (43-88)||(46932000-46932045)
chr1 (43-88)||(46932072-46932116)
chr1 (516-620)||(5068775-5068879)
chr1 (31-87)||(15220902-15220958)
chr1 (43-150)||(19711208-19711313)
chr1 (494-562)||(19895289-19895357)
chr1 (494-562)||(21364823-21364891)
chr1 (98-150)||(28928807-28928859)
chr1 (525-624)||(48526836-48526935)
[»] chr8 (59 HSPs)
chr8 (43-170)||(5033164-5033291)
chr8 (43-170)||(33841599-33841726)
chr8 (43-169)||(35440978-35441104)
chr8 (516-636)||(616782-616902)
chr8 (516-636)||(623175-623295)
chr8 (516-636)||(42587391-42587511)
chr8 (516-624)||(40494395-40494503)
chr8 (516-635)||(41263810-41263929)
chr8 (518-624)||(3100640-3100746)
chr8 (516-640)||(13216864-13216988)
chr8 (516-624)||(14237291-14237399)
chr8 (516-624)||(18044436-18044544)
chr8 (516-624)||(32998461-32998569)
chr8 (516-624)||(38957181-38957289)
chr8 (43-177)||(10086760-10086894)
chr8 (516-624)||(2766191-2766299)
chr8 (516-635)||(36642001-36642121)
chr8 (43-170)||(45191135-45191262)
chr8 (516-624)||(35403527-35403635)
chr8 (516-635)||(132017-132136)
chr8 (43-150)||(8243416-8243523)
chr8 (39-150)||(34229640-34229751)
chr8 (519-604)||(5173282-5173367)
chr8 (522-635)||(5878317-5878429)
chr8 (43-170)||(5667100-5667227)
chr8 (516-635)||(8394346-8394465)
chr8 (516-606)||(11637811-11637901)
chr8 (43-176)||(43844473-43844604)
chr8 (510-606)||(6414102-6414198)
chr8 (68-176)||(39850983-39851091)
chr8 (517-620)||(4270236-4270339)
chr8 (43-170)||(8796425-8796552)
chr8 (516-606)||(22489416-22489507)
chr8 (68-174)||(6296633-6296739)
chr8 (510-616)||(18090348-18090453)
chr8 (516-624)||(9632166-9632274)
chr8 (516-572)||(18035163-18035219)
chr8 (494-562)||(40716644-40716712)
chr8 (39-150)||(4958599-4958708)
chr8 (495-589)||(8181935-8182030)
chr8 (516-635)||(40204865-40204984)
chr8 (516-582)||(24729908-24729974)
chr8 (516-573)||(33700216-33700273)
chr8 (516-565)||(38497142-38497191)
chr8 (516-620)||(3370399-3370503)
chr8 (43-102)||(5033237-5033296)
chr8 (533-604)||(24524131-24524202)
chr8 (43-89)||(5667186-5667232)
chr8 (92-150)||(34541831-34541889)
chr8 (44-89)||(10086846-10086891)
chr8 (494-550)||(32855583-32855639)
chr8 (529-637)||(36167074-36167182)
chr8 (43-110)||(2581828-2581895)
chr8 (43-102)||(33841594-33841653)
chr8 (103-150)||(35031642-35031689)
chr8 (43-102)||(35440972-35441031)
chr8 (116-170)||(5033169-5033223)
chr8 (116-170)||(43844545-43844599)
chr8 (584-640)||(13217232-13217288)
[»] chr4 (95 HSPs)
chr4 (36-170)||(23444277-23444411)
chr4 (516-642)||(38416793-38416919)
chr4 (516-636)||(35381037-35381157)
chr4 (516-635)||(26169986-26170105)
chr4 (516-635)||(55209717-55209836)
chr4 (43-169)||(51265448-51265574)
chr4 (495-624)||(36523090-36523219)
chr4 (516-624)||(12625262-12625370)
chr4 (516-624)||(44232220-44232328)
chr4 (516-637)||(7614613-7614734)
chr4 (529-638)||(25101717-25101826)
chr4 (516-637)||(38716885-38717005)
chr4 (57-170)||(47661859-47661972)
chr4 (516-624)||(12240321-12240429)
chr4 (516-624)||(25296723-25296831)
chr4 (516-635)||(29830343-29830462)
chr4 (516-635)||(31010214-31010333)
chr4 (43-170)||(35682169-35682296)
chr4 (516-635)||(54330833-54330952)
chr4 (519-635)||(2760873-2760989)
chr4 (492-636)||(38721336-38721480)
chr4 (516-624)||(43967734-43967842)
chr4 (43-170)||(6271705-6271832)
chr4 (516-635)||(17610280-17610399)
chr4 (516-635)||(35686373-35686492)
chr4 (516-639)||(47386429-47386552)
chr4 (505-624)||(27755730-27755853)
chr4 (92-170)||(42375062-42375140)
chr4 (516-624)||(39307707-39307815)
chr4 (516-624)||(50205754-50205862)
chr4 (525-624)||(3036991-3037090)
chr4 (491-624)||(5428589-5428720)
chr4 (516-635)||(27407760-27407881)
chr4 (516-605)||(45291862-45291951)
chr4 (516-620)||(25918218-25918322)
chr4 (522-624)||(2571031-2571133)
chr4 (516-606)||(26125737-26125827)
chr4 (33-166)||(47762601-47762734)
chr4 (516-632)||(17446776-17446892)
chr4 (43-150)||(26186044-26186149)
chr4 (98-164)||(25818387-25818453)
chr4 (68-170)||(53954638-53954740)
chr4 (528-606)||(55800863-55800941)
chr4 (517-619)||(56297846-56297948)
chr4 (516-573)||(4467662-4467719)
chr4 (494-606)||(19595734-19595846)
chr4 (516-624)||(20875390-20875498)
chr4 (43-130)||(30861822-30861909)
chr4 (519-606)||(50620828-50620915)
chr4 (516-635)||(19433501-19433624)
chr4 (516-606)||(55191853-55191943)
chr4 (516-573)||(9029592-9029649)
chr4 (516-573)||(14144600-14144657)
chr4 (43-90)||(2325068-2325115)
chr4 (519-625)||(23360188-23360291)
chr4 (31-102)||(47661918-47661989)
chr4 (494-588)||(19903771-19903865)
chr4 (98-152)||(28693949-28694003)
chr4 (44-170)||(44379934-44380060)
chr4 (68-150)||(55090024-55090106)
chr4 (510-575)||(6013154-6013218)
chr4 (524-604)||(29051715-29051793)
chr4 (519-620)||(34316536-34316636)
chr4 (494-567)||(50181128-50181201)
chr4 (519-604)||(10550455-10550542)
chr4 (68-140)||(40789207-40789279)
chr4 (42-102)||(53954686-53954746)
chr4 (31-102)||(23444260-23444331)
chr4 (516-550)||(34652159-34652193)
chr4 (534-624)||(34652208-34652298)
chr4 (516-638)||(37767101-37767223)
chr4 (37-99)||(44380009-44380071)
chr4 (92-150)||(47404613-47404671)
chr4 (92-150)||(50384133-50384191)
chr4 (135-176)||(5048895-5048936)
chr4 (510-603)||(5472088-5472181)
chr4 (518-642)||(54610855-54610980)
chr4 (494-598)||(29585966-29586069)
chr4 (516-624)||(30446309-30446416)
chr4 (98-150)||(31430489-31430541)
chr4 (42-102)||(35682242-35682302)
chr4 (98-150)||(52028607-52028659)
chr4 (39-74)||(25617980-25618015)
chr4 (43-102)||(42375086-42375145)
chr4 (516-567)||(55091330-55091381)
chr4 (510-592)||(56080025-56080108)
chr4 (43-105)||(3862619-3862681)
chr4 (43-105)||(3871376-3871438)
chr4 (116-170)||(26186090-26186144)
chr4 (516-562)||(27344091-27344137)
chr4 (43-89)||(30709989-30710035)
chr4 (525-562)||(51456506-51456543)
chr4 (31-68)||(54716349-54716386)
chr4 (556-604)||(8435720-8435768)
chr4 (516-604)||(32871502-32871590)
[»] chr7 (78 HSPs)
chr7 (516-624)||(42890486-42890594)
chr7 (516-636)||(28061658-28061778)
chr7 (43-170)||(11016872-11016999)
chr7 (516-635)||(36623308-36623427)
chr7 (516-635)||(47156027-47156146)
chr7 (510-636)||(41897987-41898113)
chr7 (516-624)||(7438914-7439022)
chr7 (516-635)||(48602436-48602555)
chr7 (516-636)||(38851990-38852110)
chr7 (505-624)||(36341631-36341750)
chr7 (516-624)||(36585120-36585228)
chr7 (516-624)||(40256068-40256176)
chr7 (516-635)||(40090061-40090180)
chr7 (519-592)||(26161639-26161712)
chr7 (516-636)||(16778504-16778624)
chr7 (516-635)||(20885103-20885222)
chr7 (516-635)||(32431501-32431620)
chr7 (43-170)||(38975808-38975935)
chr7 (516-606)||(44732041-44732131)
chr7 (518-635)||(41088587-41088704)
chr7 (516-573)||(46103513-46103570)
chr7 (516-636)||(6766693-6766813)
chr7 (516-624)||(7457865-7457972)
chr7 (516-624)||(27045551-27045659)
chr7 (516-591)||(2198646-2198721)
chr7 (43-150)||(41018256-41018363)
chr7 (516-606)||(35117155-35117244)
chr7 (516-606)||(39130069-39130159)
chr7 (46-159)||(15027548-15027661)
chr7 (43-120)||(45231908-45231985)
chr7 (43-166)||(4290548-4290671)
chr7 (516-635)||(42877386-42877505)
chr7 (520-606)||(30342103-30342189)
chr7 (68-170)||(42628323-42628425)
chr7 (519-624)||(6174847-6174952)
chr7 (519-624)||(7169137-7169242)
chr7 (532-624)||(3785531-3785623)
chr7 (516-624)||(4131646-4131754)
chr7 (516-624)||(25566691-25566798)
chr7 (535-635)||(46322127-46322227)
chr7 (516-624)||(46479840-46479948)
chr7 (103-167)||(48000705-48000769)
chr7 (530-620)||(8683833-8683923)
chr7 (520-573)||(11502727-11502780)
chr7 (98-170)||(48000795-48000867)
chr7 (516-604)||(49101956-49102044)
chr7 (37-124)||(30217508-30217594)
chr7 (43-150)||(34854723-34854830)
chr7 (519-624)||(5529022-5529127)
chr7 (516-592)||(5788520-5788596)
chr7 (516-591)||(41134631-41134701)
chr7 (516-591)||(49110613-49110688)
chr7 (43-89)||(11016958-11017004)
chr7 (516-562)||(21379817-21379863)
chr7 (58-124)||(22764754-22764820)
chr7 (515-573)||(38767201-38767259)
chr7 (555-635)||(45331915-45331992)
chr7 (516-573)||(3851136-3851193)
chr7 (68-150)||(4649348-4649432)
chr7 (68-121)||(10419486-10419539)
chr7 (43-140)||(27028831-27028928)
chr7 (517-562)||(35570193-35570238)
chr7 (519-587)||(34750550-34750618)
chr7 (537-573)||(42662248-42662284)
chr7 (510-562)||(47525973-47526025)
chr7 (522-569)||(37467456-37467503)
chr7 (43-102)||(42628371-42628430)
chr7 (504-562)||(4048865-4048923)
chr7 (103-161)||(6225542-6225600)
chr7 (46-88)||(48000827-48000869)
chr7 (133-170)||(34854788-34854825)
chr7 (43-88)||(38975895-38975940)
chr7 (133-170)||(41018321-41018358)
chr7 (494-550)||(7380903-7380959)
chr7 (68-124)||(7671965-7672021)
chr7 (522-562)||(19120679-19120719)
chr7 (522-562)||(23707572-23707612)
chr7 (68-124)||(29053368-29053424)
[»] chr2 (63 HSPs)
chr2 (510-635)||(16865054-16865179)
chr2 (516-636)||(19141209-19141329)
chr2 (516-635)||(8042165-8042284)
chr2 (516-633)||(5404998-5405115)
chr2 (516-624)||(7608060-7608168)
chr2 (516-624)||(7799858-7799966)
chr2 (516-624)||(44365168-44365276)
chr2 (516-621)||(11841736-11841841)
chr2 (519-636)||(39358145-39358262)
chr2 (43-170)||(16514427-16514554)
chr2 (519-636)||(2183103-2183220)
chr2 (43-170)||(29508698-29508826)
chr2 (510-625)||(24093673-24093789)
chr2 (516-624)||(6223077-6223185)
chr2 (516-624)||(11931702-11931810)
chr2 (519-625)||(36072184-36072290)
chr2 (519-636)||(42133751-42133868)
chr2 (78-170)||(14229361-14229453)
chr2 (522-624)||(19262691-19262793)
chr2 (68-170)||(38933615-38933717)
chr2 (516-624)||(24251971-24252078)
chr2 (59-170)||(6721970-6722081)
chr2 (522-625)||(43444689-43444792)
chr2 (68-170)||(6217232-6217334)
chr2 (77-170)||(14470600-14470693)
chr2 (68-152)||(2893991-2894075)
chr2 (58-153)||(8534164-8534259)
chr2 (39-102)||(14470591-14470654)
chr2 (39-170)||(24115919-24116050)
chr2 (516-573)||(44644932-44644989)
chr2 (519-610)||(36177723-36177815)
chr2 (516-624)||(33607387-33607491)
chr2 (517-572)||(38839136-38839191)
chr2 (39-86)||(45213892-45213939)
chr2 (516-573)||(9172289-9172346)
chr2 (57-150)||(15011297-15011390)
chr2 (516-637)||(22839070-22839191)
chr2 (516-573)||(32774653-32774710)
chr2 (516-573)||(38292014-38292071)
chr2 (528-636)||(9006939-9007047)
chr2 (98-170)||(14892318-14892390)
chr2 (31-99)||(14892339-14892407)
chr2 (516-592)||(31610796-31610872)
chr2 (98-170)||(37961764-37961836)
chr2 (494-561)||(3013817-3013884)
chr2 (494-589)||(7666136-7666231)
chr2 (510-573)||(13117461-13117524)
chr2 (516-595)||(13125288-13125367)
chr2 (516-619)||(36719467-36719565)
chr2 (68-150)||(2828612-2828694)
chr2 (133-170)||(45213893-45213930)
chr2 (68-168)||(29925580-29925680)
chr2 (115-175)||(33018620-33018680)
chr2 (553-592)||(13598484-13598523)
chr2 (43-102)||(16514500-16514559)
chr2 (494-589)||(19165904-19165999)
chr2 (43-86)||(29508693-29508736)
chr2 (520-571)||(31904027-31904078)
chr2 (51-150)||(37762029-37762128)
chr2 (525-579)||(3837271-3837325)
chr2 (43-88)||(6217227-6217272)
chr2 (43-124)||(9173035-9173116)
chr2 (518-562)||(4835728-4835772)
[»] chr6 (52 HSPs)
chr6 (516-636)||(17213927-17214047)
chr6 (516-637)||(19088101-19088222)
chr6 (516-624)||(22054783-22054891)
chr6 (516-636)||(32414822-32414942)
chr6 (516-635)||(24624084-24624203)
chr6 (516-636)||(4147930-4148050)
chr6 (516-640)||(29790201-29790325)
chr6 (493-624)||(4440861-4440992)
chr6 (516-635)||(6563226-6563345)
chr6 (516-639)||(18668831-18668954)
chr6 (491-624)||(17155160-17155293)
chr6 (516-624)||(15383073-15383181)
chr6 (516-624)||(20226441-20226549)
chr6 (516-624)||(22120425-22120533)
chr6 (68-170)||(24618609-24618711)
chr6 (516-605)||(1040854-1040943)
chr6 (516-624)||(15337499-15337607)
chr6 (516-624)||(17257794-17257902)
chr6 (516-636)||(32671815-32671935)
chr6 (516-625)||(28477763-28477872)
chr6 (39-170)||(17750902-17751032)
chr6 (519-604)||(3623856-3623940)
chr6 (516-621)||(3989407-3989511)
chr6 (519-624)||(31869719-31869824)
chr6 (518-625)||(29693893-29694000)
chr6 (92-170)||(12343152-12343230)
chr6 (522-604)||(19240741-19240823)
chr6 (36-150)||(551193-551307)
chr6 (92-170)||(13043509-13043587)
chr6 (516-606)||(24955539-24955629)
chr6 (516-577)||(12226033-12226094)
chr6 (516-591)||(2360034-2360109)
chr6 (516-635)||(25475956-25476070)
chr6 (516-578)||(5495306-5495368)
chr6 (519-625)||(21540775-21540881)
chr6 (43-129)||(24587464-24587550)
chr6 (522-624)||(31569175-31569277)
chr6 (516-573)||(23158052-23158109)
chr6 (519-571)||(8101664-8101716)
chr6 (516-619)||(20437156-20437260)
chr6 (519-573)||(10298719-10298773)
chr6 (68-125)||(31654333-31654390)
chr6 (517-573)||(1260492-1260548)
chr6 (516-624)||(10520479-10520587)
chr6 (39-102)||(17750978-17751041)
chr6 (68-150)||(10521877-10521959)
chr6 (116-170)||(24587469-24587523)
chr6 (43-89)||(24618604-24618650)
chr6 (101-150)||(2315332-2315381)
chr6 (508-569)||(28556737-28556798)
chr6 (516-544)||(16193025-16193053)
chr6 (494-562)||(26567265-26567333)
[»] chr3 (61 HSPs)
chr3 (516-624)||(21797567-21797675)
chr3 (516-636)||(42490339-42490459)
chr3 (516-635)||(13499478-13499597)
chr3 (43-170)||(30734410-30734537)
chr3 (491-624)||(44561795-44561928)
chr3 (516-636)||(27010617-27010737)
chr3 (516-636)||(39866284-39866404)
chr3 (516-635)||(42761626-42761745)
chr3 (516-624)||(27334874-27334982)
chr3 (516-636)||(33415798-33415918)
chr3 (516-597)||(30213842-30213923)
chr3 (516-636)||(20765195-20765315)
chr3 (516-624)||(54507652-54507760)
chr3 (39-150)||(33689175-33689286)
chr3 (516-605)||(38137854-38137943)
chr3 (43-164)||(47492061-47492182)
chr3 (43-176)||(51046075-51046208)
chr3 (516-639)||(21005289-21005412)
chr3 (517-624)||(34912286-34912393)
chr3 (43-170)||(41752967-41753094)
chr3 (36-150)||(43139737-43139851)
chr3 (516-630)||(33803526-33803641)
chr3 (44-170)||(50524706-50524832)
chr3 (516-589)||(52167255-52167328)
chr3 (516-624)||(6910345-6910453)
chr3 (491-566)||(44856415-44856490)
chr3 (516-635)||(48334664-48334782)
chr3 (39-146)||(55223231-55223338)
chr3 (68-170)||(1801454-1801556)
chr3 (516-606)||(36227574-36227664)
chr3 (57-150)||(50549992-50550085)
chr3 (516-635)||(19823900-19824013)
chr3 (39-102)||(30734401-30734464)
chr3 (107-170)||(45103117-45103180)
chr3 (516-573)||(15332949-15333006)
chr3 (519-624)||(41252909-41253014)
chr3 (516-592)||(43181498-43181575)
chr3 (516-624)||(43467885-43467993)
chr3 (519-589)||(25527450-25527520)
chr3 (68-150)||(30476502-30476584)
chr3 (44-170)||(30580764-30580890)
chr3 (68-150)||(47677283-47677365)
chr3 (519-592)||(3430420-3430493)
chr3 (78-146)||(29031746-29031814)
chr3 (92-164)||(30904296-30904368)
chr3 (517-577)||(33128063-33128123)
chr3 (116-170)||(33689184-33689238)
chr3 (510-615)||(20410098-20410201)
chr3 (516-573)||(41751553-41751610)
chr3 (517-637)||(19327474-19327594)
chr3 (519-587)||(23940508-23940576)
chr3 (519-638)||(37766044-37766168)
chr3 (68-120)||(39385746-39385798)
chr3 (516-571)||(17643795-17643850)
chr3 (530-577)||(27813445-27813492)
chr3 (524-574)||(3017852-3017902)
chr3 (516-578)||(15568078-15568140)
chr3 (519-573)||(55264659-55264713)
chr3 (43-88)||(1801449-1801494)
chr3 (523-579)||(23224306-23224363)
chr3 (39-67)||(47677263-47677291)
[»] scaffold0586 (1 HSPs)
scaffold0586 (39-170)||(7055-7185)
[»] scaffold0056 (1 HSPs)
scaffold0056 (516-635)||(70961-71079)
[»] scaffold0018 (1 HSPs)
scaffold0018 (516-624)||(67912-68020)
[»] scaffold0003 (1 HSPs)
scaffold0003 (516-636)||(161980-162100)
[»] scaffold0016 (2 HSPs)
scaffold0016 (68-170)||(49711-49813)
scaffold0016 (43-102)||(49706-49765)
[»] scaffold0022 (1 HSPs)
scaffold0022 (516-639)||(100790-100913)
[»] scaffold0295 (1 HSPs)
scaffold0295 (516-636)||(13860-13980)
[»] scaffold0262 (1 HSPs)
scaffold0262 (516-624)||(22791-22899)
[»] scaffold0225 (1 HSPs)
scaffold0225 (516-624)||(8976-9084)
[»] scaffold0180 (2 HSPs)
scaffold0180 (98-170)||(19130-19202)
scaffold0180 (37-102)||(19119-19184)
[»] scaffold0029 (1 HSPs)
scaffold0029 (516-624)||(138173-138281)
[»] scaffold0161 (1 HSPs)
scaffold0161 (43-170)||(27228-27355)
[»] scaffold1033 (1 HSPs)
scaffold1033 (92-149)||(2265-2322)
[»] scaffold1029 (1 HSPs)
scaffold1029 (92-149)||(2265-2322)
[»] scaffold0595 (1 HSPs)
scaffold0595 (522-573)||(4010-4061)
[»] scaffold0099 (1 HSPs)
scaffold0099 (519-573)||(28798-28852)
[»] scaffold0608 (1 HSPs)
scaffold0608 (494-567)||(1588-1661)
[»] scaffold0009 (2 HSPs)
scaffold0009 (494-573)||(53541-53620)
scaffold0009 (516-562)||(217018-217064)
[»] scaffold0536 (1 HSPs)
scaffold0536 (57-161)||(4909-5010)
[»] scaffold0047 (1 HSPs)
scaffold0047 (68-150)||(63785-63867)
[»] scaffold0481 (1 HSPs)
scaffold0481 (98-146)||(2919-2967)


Alignment Details
Target: chr5 (Bit Score: 190; Significance: 1e-103; HSPs: 73)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 141 - 374
Target Start/End: Complemental strand, 39777088 - 39776856
Alignment:
Q  141 atcaatgtcatcaatgtcacccaactctatatcatcaagtatccaacacacttaatgcatcacagaaaaacgacaacggcctcactagcggcggcgtgga 240  Q
    |||||||||| ||||||||||||||||||| ||| | | ||||||||||| ||||| |||||||||||||||||| |||||||||||||||| |||||||    
T  39777088 atcaatgtcaccaatgtcacccaactctatgtcacccaatatccaacacatttaattcatcacagaaaaacgacagcggcctcactagcggcagcgtgga 39776989  T
Q  241 tgctgtaaattttatgttatgaaaacaaggtgaaactaaatgtcgttcgagtaggaaacaatgtgaaaataataaataatcattagtattgttggtattt 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39776988 tgctgtaaattttatgttatgaaaacaaggtgaaactaaatgtcgttcgagtaggaaacaatgtgaaaataataaataatcattagtattgttggtattt 39776889  T
Q  341 gaagagcaaagcaaattagaaaacatgttagtta 374  Q
    ||||||||||||||||||| ||||||||||||||    
T  39776888 gaagagcaaagcaaattag-aaacatgttagtta 39776856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 490 - 648
Target Start/End: Complemental strand, 39776772 - 39776617
Alignment:
Q  490 ctgtaaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaata 589  Q
    |||||||||||||||||||||||| |||||   | ||||||||||||||||||||||||||||||||||||||||| ||||||||||| | || ||||||    
T  39776772 ctgtaaatatttactgaaataaatcgaaca---ttttacatgctaatatttgtatttatatgttagttaaaaagtacggtcaaaataagttatgtgaata 39776676  T
Q  590 gtgtatattgcaaaaatacgaaatgtattttgaaatcgagggagtatatttcagtaagt 648  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39776675 gtgtacattgcaaaaatacgaaatgtattttgaaatcgagggagtatatttcactaagt 39776617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 491 - 636
Target Start/End: Original strand, 38916368 - 38916513
Alignment:
Q  491 tgtaaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatag 590  Q
    ||||||||||||  |||| |||| ||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||  || |||| |||||||    
T  38916368 tgtaaatatttatcgaaacaaatcgaataacatctcacatgctaacatttgtatttatatgttagttaaaaagtatggtcaaagcaagtcatgtgaatag 38916467  T
Q  591 tgtatattgcaaaaatacgaaatgtattttgaaatcgagggagtat 636  Q
    || ||| ||||||||| ||| |||||||||||||  ||||||||||    
T  38916468 tgcatactgcaaaaatgcgacatgtattttgaaacggagggagtat 38916513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 516 - 636
Target Start/End: Original strand, 30355017 - 30355136
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||| |||||||  ||||||||| |||||||||||||  || ||||    
T  30355017 aacaacatcttacatgctaatatttgtatttatatattagttaaaatgtatggttaaagtaaatcaagtgaatagtgcatattgcaaaaattggacatgt 30355116  T
Q  616 attttgaaatcgagggagtat 636  Q
    ||||||||| |||||||||||    
T  30355117 attttgaaa-cgagggagtat 30355136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 174
Target Start/End: Original strand, 291100 - 291231
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| ||||| ||||| |||||||||||| ||| |||| | ||||||||||    
T  291100 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtatttctttctctttcacaaacattgtgacattgtgattgat 291199  T
Q  143 caatgtcatcaatgtcacccaactctatatca 174  Q
    |||||||| |||||||||||||||||||||||    
T  291200 caatgtcaccaatgtcacccaactctatatca 291231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 516 - 635
Target Start/End: Complemental strand, 978196 - 978077
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  978196 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 978097  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  978096 attttgaaacggagggagta 978077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 516 - 636
Target Start/End: Complemental strand, 33387339 - 33387219
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  33387339 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 33387240  T
Q  616 attttgaaatcgagggagtat 636  Q
    ||||| |||| ||||||||||    
T  33387239 attttaaaatggagggagtat 33387219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 516 - 635
Target Start/End: Original strand, 9502770 - 9502889
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||| | |||||||||||   | ||||    
T  9502770 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattaaacatgt 9502869  T
Q  616 attttgaaatcgagggagta 635  Q
    ||||| |||  |||||||||    
T  9502870 attttaaaacggagggagta 9502889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 516 - 636
Target Start/End: Original strand, 8086173 - 8086293
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  8086173 aacaacatcttacatgttaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 8086272  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||  ||||||||||    
T  8086273 attttgaaacggagggagtat 8086293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 39 - 170
Target Start/End: Original strand, 12913802 - 12913933
Alignment:
Q  39 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgat 138  Q
    |||||||||||| ||||  ||||||||| |||||||| ||||| |||||||  |||| ||||||| ||||||||||||||||||||  ||| | ||||||    
T  12913802 ttgtgtgacatatagttgagtgacattggtgacattggccaatcacaatgtcacaattcttgtgtatctctctctttcacaagcattatgacattgtgat 12913901  T
Q  139 tgatcaatgtcatcaatgtcacccaactctat 170  Q
    ||| |||| ||| |||||||||||||||||||    
T  12913902 tgaccaatatcaccaatgtcacccaactctat 12913933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 19655161 - 19655288
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||| | ||||||||      
T  19655161 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattgga 19655260  T
Q  143 caatgtcatcaatgtcacccaactctat 170  Q
    |||||||| ||||||||| |||||||||    
T  19655261 caatgtcaccaatgtcactcaactctat 19655288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 14634300 - 14634408
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||| |||  ||| ||||| | |||||||||||  || ||||    
T  14634300 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgactagtgcacattgcaaaaattggacatgt 14634399  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  14634400 attttgaaa 14634408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 68 - 170
Target Start/End: Original strand, 16971172 - 16971274
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactc 167  Q
    |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| | |||||||| ||||||||| ||||||||||||||||    
T  16971172 tgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactc 16971271  T
Q  168 tat 170  Q
    |||    
T  16971272 tat 16971274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 68 - 169
Target Start/End: Original strand, 3899867 - 3899968
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactc 167  Q
    |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| | |||||||| ||||||||| ||||||||||||||||    
T  3899867 tgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactc 3899966  T
Q  168 ta 169  Q
    ||    
T  3899967 ta 3899968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 57 - 170
Target Start/End: Original strand, 29699384 - 29699497
Alignment:
Q  57 ggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatg 156  Q
    |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| | ||||||||  |||||||| ||||     
T  29699384 ggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtcaccaata 29699483  T
Q  157 tcacccaactctat 170  Q
    ||||||||||||||    
T  29699484 tcacccaactctat 29699497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 33587612 - 33587720
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||| |||||||||||||||||  ||||||||||| |||||||||| ||| ||| ||||||| || | |||||||||||  || ||||    
T  33587612 aacaacatcttacatgttaatatttgtatttatagattagttaaaaaatatggtcaaagtaagtcaaatgaataatgcacattgcaaaaattggacatgt 33587711  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  33587712 attttgaaa 33587720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 519 - 604
Target Start/End: Complemental strand, 11251230 - 11251145
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 604  Q
    |||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||| |||  ||||||||| | |||||||||    
T  11251230 aacatcgtacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 11251145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 516 - 635
Target Start/End: Original strand, 24992281 - 24992400
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||| |||||||||||||||||||||  ||||||||||| |||||||||| |||   || ||||||||| | |||| |||| || || ||||    
T  24992281 aacaacatcttatatgctaatatttgtatttataaattagttaaaaaatatggtcaaagtaagctatgtgaatagtgcacattgtaaaactatgacatgt 24992380  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  24992381 attttgaaacggagggagta 24992400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 516 - 635
Target Start/End: Complemental strand, 40156317 - 40156198
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  ||| ||||||| |||||| ||| ||| |||  ||||||||| | ||||||||| |  || ||||    
T  40156317 aacaacatcttacatgctaatatttgtatttatacattaattaaaaattatggtaaaagtaagtcaagtgaatagtgcacattgcaaaagttggatatgt 40156218  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  40156217 attttgaaacggagggagta 40156198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 2953242 - 2953320
Alignment:
Q  92 caatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    |||| |||||||||||||||||||||||||||| |||| | ||||||||  |||||||| |||||||||||||||||||    
T  2953242 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtcaccaatgtcacccaactctat 2953320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 16439146 - 16439248
Alignment:
Q  48 atagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatg 147  Q
    |||||||| ||| | |||| ||||||||  |||| |||||||  |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||    
T  16439146 atagagttgggtaatattggtgacattggtcaatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatg 16439245  T
Q  148 tca 150  Q
    |||    
T  16439246 tca 16439248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 2094018 - 2093945
Alignment:
Q  97 cttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    ||||||||||||||||||||||||||||  ||| | |||||||||||||||||| |||| ||||||||||||||    
T  2094018 cttgtgtttctctctctttcacaagcattatgacattgtgattgatcaatgtcaccaatatcacccaactctat 2093945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 3472420 - 3472528
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| |||||||||| ||| |||  | ||||||| | |||||||||||   | ||||    
T  3472420 aacaacatcttacatgctaatatttgtatttattcattagttaaaaaatatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaattgaacatgt 3472519  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  3472520 attttgaaa 3472528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 638
Target Start/End: Original strand, 18094224 - 18094346
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||  | ||| ||| | |  |||||| || | |||||||||||   | ||||    
T  18094224 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtataattaaagtaagttaagtgaataatgcacattgcaaaaattgaacatgt 18094323  T
Q  616 attttgaaatcgagggagtatat 638  Q
    |||||||||  ||||||||||||    
T  18094324 attttgaaacggagggagtatat 18094346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 68 - 169
Target Start/End: Original strand, 26662427 - 26662529
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtga-ttgatcaatgtcatcaatgtcacccaact 166  Q
    |||||||||||||| |||||||| || | ||||||||||||||| ||||||||| || |||| | ||||| |||| |||||||| |||| ||||||||||    
T  26662427 tgacattgaccaatcacaatgttacattgcttgtgtttctctctttttcacaagtattgtgacattgtgatttgaccaatgtcaccaatatcacccaact 26662526  T
Q  167 cta 169  Q
    |||    
T  26662527 cta 26662529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 68 - 169
Target Start/End: Original strand, 26934022 - 26934124
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtga-ttgatcaatgtcatcaatgtcacccaact 166  Q
    |||||||||||||| |||||||| || | ||||||||||||||| ||||||||| || |||| | ||||| |||| |||||||| |||| ||||||||||    
T  26934022 tgacattgaccaatcacaatgttacattgcttgtgtttctctctttttcacaagtattgtgacattgtgatttgaccaatgtcaccaatatcacccaact 26934121  T
Q  167 cta 169  Q
    |||    
T  26934122 cta 26934124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 68 - 170
Target Start/End: Original strand, 28818945 - 28819047
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactc 167  Q
    ||||||||  |||| |||||||  |||||||||| |||||||||||||||||||||| |||| | | ||||||| |||||||| |||| |||| ||||||    
T  28818945 tgacattggtcaatcacaatgtcacaatacttgtatttctctctctttcacaagcattgtgacattatgattgaccaatgtcaccaatatcactcaactc 28819044  T
Q  168 tat 170  Q
    |||    
T  28819045 tat 28819047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 44 - 174
Target Start/End: Complemental strand, 30117962 - 30117832
Alignment:
Q  44 tgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatc 143  Q
    |||||||||||| | |||||||| ||| ||||  |||| | ||||   |||| ||||||||||||||| ||||| || ||| |||| | |||||||| ||    
T  30117962 tgacatagagttggatgacattggtgatattggtcaatcataatgccacaatgcttgtgtttctctctttttcataaacattgtgacattgtgattggtc 30117863  T
Q  144 aatgtcatcaatgtcacccaactctatatca 174  Q
    ||| ||| |||||||||||||||||||||||    
T  30117862 aatatcaccaatgtcacccaactctatatca 30117832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 516 - 573
Target Start/End: Complemental strand, 11761185 - 11761128
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  11761185 aacaacatcttacatgttaatatttgtatttatatattagttaaaaaatatggtcaaa 11761128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 494 - 562
Target Start/End: Complemental strand, 32400468 - 32400400
Alignment:
Q  494 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 562  Q
    ||||||||| ||| | ||||  ||||||||||||||||||||||||||||||||||| |||||||||||    
T  32400468 aaatatttattgagacaaattaaacaacatcttacatgctaatatttgtatttatatattagttaaaaa 32400400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 150
Target Start/End: Complemental strand, 3180198 - 3180088
Alignment:
Q  39 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgat 138  Q
    |||||| |||||||||| ||| |||||| ||||||||  |||| ||||||   |||| |||||||||||||||||||||||| ||| |||| | | ||||    
T  3180198 ttgtgtcacatagagtt-ggtaacattggtgacattggtcaatcacaatgccacaatgcttgtgtttctctctctttcacaaacattgtgacattatgat 3180100  T
Q  139 tgatcaatgtca 150  Q
    ||||||||||||    
T  3180099 tgatcaatgtca 3180088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 516 - 635
Target Start/End: Original strand, 12007775 - 12007894
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||| ||||||||||  |||||||||||||| ||| |||||||||| ||||||| ||| |||| | ||||||| | | |  |||||| ||| ||||    
T  12007775 aacaacattttacatgctagcatttgtatttatatattaattaaaaagtagggtcaaattaagtcatgtaaatagtgcacaatataaaaatgcgacatgt 12007874  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  12007875 attttgaaacggagggagta 12007894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 516 - 625
Target Start/End: Original strand, 11785868 - 11785978
Alignment:
Q  516 aacaacatcttacatgctaatattt-gtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatg 614  Q
    |||||||||||||||| |||||||| |||||||||  |||||||||||||||| ||||| ||| |||  ||||||||  | |||||||||||   | |||    
T  11785868 aacaacatcttacatggtaatattttgtatttatacattagttaaaaagtatgatcaaagtaagtcaagtgaatagtacacattgcaaaaattaaacatg 11785967  T
Q  615 tattttgaaat 625  Q
    |||||||||||    
T  11785968 tattttgaaat 11785978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 526 - 620
Target Start/End: Complemental strand, 13812156 - 13812062
Alignment:
Q  526 tacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtatttt 620  Q
    ||||| |||||||||||||| |||| ||||||||||| |||| | ||||||||| || |||||| |  |||||| |||||||||| |||||||||    
T  13812156 tacatactaatatttgtattgatatattagttaaaaaatatgattaaaataaattatgtgaataatacatattgtaaaaatacgatatgtatttt 13812062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 573
Target Start/End: Complemental strand, 7224284 - 7224227
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    |||||||| |||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  7224284 aacaacattttacatgctaatatttgtatttataaattagttagaaagtatggtcaaa 7224227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 565
Target Start/End: Original strand, 9050719 - 9050768
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagta 565  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  9050719 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagta 9050768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 522 - 638
Target Start/End: Complemental strand, 34112075 - 34111959
Alignment:
Q  522 atcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtattttg 621  Q
    |||||||||| |||||||||||||||||  ||||| ||||| ||| |||||| ||| |||  ||||||||| | ||||||||||   || ||||||||||    
T  34112075 atcttacatgataatatttgtatttatagattagtaaaaaaatatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaactagacatgtattttg 34111976  T
Q  622 aaatcgagggagtatat 638  Q
    |||  ||| ||||||||    
T  34111975 aaacggagagagtatat 34111959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 518 - 573
Target Start/End: Complemental strand, 32017330 - 32017275
Alignment:
Q  518 caacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| |||| |||||    
T  32017330 caacatcttacatgctaacatttgtatttatatattagttaaaaaatatgatcaaa 32017275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 400 - 443
Target Start/End: Complemental strand, 39776869 - 39776826
Alignment:
Q  400 aaacatgttagtaattaaattcagagattgagaaatgacaacac 443  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  39776869 aaacatgttagttattaaattcagagattgagaaatgacaacac 39776826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 16802472 - 16802554
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    |||||||| ||||| |||||||  ||||| |||||||||||||||||| |||||||| |||| | | |||||| |||||||||    
T  16802472 tgacattggccaatcacaatgtaacaatatttgtgtttctctctcttttacaagcattgtgacattctgattggtcaatgtca 16802554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 578
Target Start/End: Complemental strand, 18998806 - 18998744
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaa 578  Q
    ||||||||||||||| |||| |||||||||||||| ||||||||||| |||||| ||| ||||    
T  18998806 aacaacatcttacatactaacatttgtatttatatattagttaaaaaatatggttaaagtaaa 18998744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 537 - 591
Target Start/End: Complemental strand, 35825060 - 35825006
Alignment:
Q  537 atttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagt 591  Q
    |||||||||||||| || |||||||| |||||||||||||||| |||||||||||    
T  35825060 atttgtatttatatattggttaaaaattatggtcaaaataaattatatgaatagt 35825006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 19598335 - 19598416
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 124  Q
    ||||||||||||| ||| |||||| ||||||||  |||| |||||    |||| ||||||||||||||||||||||||||||    
T  19598335 gtgacatagagttgggtaacattggtgacattggtcaatcacaataccacaatgcttgtgtttctctctctttcacaagcat 19598416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 516 - 573
Target Start/End: Original strand, 26387022 - 26387079
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    |||||||||||| ||||||| |||| ||||||||||||||||||||| |||| |||||    
T  26387022 aacaacatcttaaatgctaacatttatatttatatgttagttaaaaaatatgatcaaa 26387079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 3422355 - 3422399
Alignment:
Q  518 caacatcttacatgctaatatttgtatttatatgttagttaaaaa 562  Q
    |||||||||||||||||| |||||||||||||| |||||||||||    
T  3422355 caacatcttacatgctaacatttgtatttatatattagttaaaaa 3422399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 16971279 - 16971220
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  16971279 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 16971220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 121 - 168
Target Start/End: Original strand, 32485630 - 32485677
Alignment:
Q  121 gcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactct 168  Q
    |||| |||||| |||||||||||||||||| |||||||||||||||||    
T  32485630 gcattgtgatattgtgattgatcaatgtcaccaatgtcacccaactct 32485677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 533 - 624
Target Start/End: Complemental strand, 37495712 - 37495621
Alignment:
Q  533 taatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtattttgaaa 624  Q
    |||||||||||||||||| ||||||||||| |||| ||||| |||   ||  |||||||| |||||  |||| ||| |||||||||||||||    
T  37495712 taatatttgtatttatatattagttaaaaaatatgatcaaagtaagatatgagaatagtgcatattataaaattacaaaatgtattttgaaa 37495621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 516 - 573
Target Start/End: Original strand, 12447561 - 12447616
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    ||||||||||||||||||||||  |||||||| |  ||||||||||||||||||||||    
T  12447561 aacaacatcttacatgctaata--tgtatttaaacattagttaaaaagtatggtcaaa 12447616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 13312267 - 13312313
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgt 89  Q
    ||||||||||||| |||||||||||||||||||| |||| |||||||    
T  13312267 gtgacatagagttaggtgacattgatgacattgatcaatcacaatgt 13312313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 523 - 576
Target Start/End: Original strand, 20692541 - 20692592
Alignment:
Q  523 tcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaata 576  Q
    ||||||||| |||||||||||||||||  || ||||||||||||||||||||||    
T  20692541 tcttacatgttaatatttgtatttata--ttggttaaaaagtatggtcaaaata 20692592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 516 - 562
Target Start/End: Original strand, 24916389 - 24916435
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 562  Q
    |||||||||||| |||||||||||||||||||||  |||||||||||    
T  24916389 aacaacatcttatatgctaatatttgtatttataaattagttaaaaa 24916435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 516 - 566
Target Start/End: Complemental strand, 27109807 - 27109757
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtat 566  Q
    ||||||||||||||||||||||||||||||| ||  ||| |||||||||||    
T  27109807 aacaacatcttacatgctaatatttgtatttttacattaattaaaaagtat 27109757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 2356312 - 2356401
Alignment:
Q  78 caattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    |||||||||||||  ||| ||||||||  ||||||||||| |||||| |||| | ||||||||  |||||||| |||||||| ||||||||||    
T  2356312 caattacaatgttataatgcttgtgtt--tctctctttcataagcattgtgaca-tgtgattggccaatgtcaccaatgtcatccaactctat 2356401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 13312309 - 13312272
Alignment:
Q  133 tgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  13312309 tgtgattgatcaatgtcatcaatgtcacctaactctat 13312272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 532 - 624
Target Start/End: Complemental strand, 25330325 - 25330234
Alignment:
Q  532 ctaatatttgtatttatat-gttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtattttgaaa 624  Q
    ||||||||||||||||||| | || ||||||| ||  |||||||||||| ||||||||| | ||||| | |||||| |||||||||||||||||    
T  25330325 ctaatatttgtatttatatagata-ttaaaaa-taaagtcaaaataaattatatgaataatttatatagtaaaaatgcgaaatgtattttgaaa 25330234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 130
Target Start/End: Complemental strand, 39031296 - 39031199
Alignment:
Q  33 tagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgat 130  Q
    |||||||||  |||||||||||  |||||||||| ||||| ||| |||| ||||| |   |||| |||| ||||||| |||||||||||||| |||||    
T  39031296 tagtatttggatgacatagagtggggtgacattggtgacactgatcaatcacaatatcataatatttgtatttctctttctttcacaagcattgtgat 39031199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 16439200 - 16439140
Alignment:
Q  116 cacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctatatcatc 176  Q
    ||||||||| |||| | ||||||||| |||||||| |||| | ||||||||||||||||||    
T  16439200 cacaagcattgtgacattgtgattgaccaatgtcaccaatattacccaactctatatcatc 16439140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 522 - 562
Target Start/End: Original strand, 27579579 - 27579619
Alignment:
Q  522 atcttacatgctaatatttgtatttatatgttagttaaaaa 562  Q
    |||||||||||||| |||||||||||||| |||||||||||    
T  27579579 atcttacatgctaacatttgtatttatatattagttaaaaa 27579619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 519 - 599
Target Start/End: Original strand, 40267941 - 40268020
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattg 599  Q
    ||||||||||||||||| |||||||| ||| | ||| ||||||| |||||||||||||||  || | ||||||| ||||||    
T  40267941 aacatcttacatgctaacatttgtatctatgtattaattaaaaa-tatggtcaaaataaactatgtaaatagtgcatattg 40268020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 2953325 - 2953266
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    ||||||||||||| |||||||||| |||||||| ||||| |||||||  |||| ||||||    
T  2953325 gtgacatagagttgggtgacattggtgacattggccaatcacaatgtcacaatgcttgtg 2953266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 3899974 - 3899915
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    ||||| ||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  3899974 gtgacttagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 3899915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 638
Target Start/End: Original strand, 5947697 - 5947816
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtatt 618  Q
    ||||| ||| ||||| | ||||||||||||||||||| |||||| ||| |||||| ||| | || |||||| ||||||| |  |||||  || |||||||    
T  5947697 aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtatt 5947796  T
Q  619 ttgaaatcgagggagtatat 638  Q
    || |||| || ||| |||||    
T  5947797 ttaaaatggatggattatat 5947816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 567
Target Start/End: Original strand, 12456783 - 12456834
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatg 567  Q
    ||||||||||||||| |||| |||||||||| ||| ||||||||||| ||||    
T  12456783 aacaacatcttacatactaacatttgtatttgtatattagttaaaaaatatg 12456834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 638
Target Start/End: Complemental strand, 18598620 - 18598541
Alignment:
Q  559 aaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtattttgaaatcgagggagtatat 638  Q
    ||||||||||||||| ||| |||| | |||| || | ||||||||||| ||| |||||||||||||  || |||||||||    
T  18598620 aaaagtatggtcaaagtaattcatgtcaataatgcacattgcaaaaatgcgacatgtattttgaaacagatggagtatat 18598541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 516 - 562
Target Start/End: Original strand, 12359964 - 12360010
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 562  Q
    ||||| ||||| |||||||| |||||||||||||| |||||||||||    
T  12359964 aacaatatctttcatgctaacatttgtatttatatattagttaaaaa 12360010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 19598394 - 19598340
Alignment:
Q  116 cacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    ||||||||| ||| || ||||||||| |||||||| |||||| ||||||||||||    
T  19598394 cacaagcattgtggtattgtgattgaccaatgtcaccaatgttacccaactctat 19598340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 38134485 - 38134411
Alignment:
Q  66 gatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattg 140  Q
    ||||| |||| ||||| |||||||  |||| ||||||||||| |||||||||| ||||| |||| | ||||||||    
T  38134485 gatgatattggccaatcacaatgtcacaatgcttgtgtttctttctctttcactagcattgtgacattgtgattg 38134411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 12913945 - 12913892
Alignment:
Q  36 tatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgt 89  Q
    |||||||||||||||||||| |||||||||| ||| ||||  |||| |||||||    
T  12913945 tatttgtgtgacatagagttgggtgacattggtgatattggtcaatcacaatgt 12913892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 39031238 - 39031287
Alignment:
Q  127 tgatactgtgattgatcaatgtcatcaatgtcacccaactctatatcatc 176  Q
    ||||| |||||||||||| ||||| ||||||||||| ||||||| |||||    
T  39031238 tgatattgtgattgatcagtgtcaccaatgtcaccccactctatgtcatc 39031287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 494 - 550
Target Start/End: Original strand, 2825242 - 2825298
Alignment:
Q  494 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatat 550  Q
    ||||||| | ||| |||||| ||||||||||||| ||||||| |||| |||||||||    
T  2825242 aaatattcattgagataaatcgaacaacatcttatatgctaacatttctatttatat 2825298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 625
Target Start/End: Original strand, 7750066 - 7750138
Alignment:
Q  553 tagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtattttgaaat 625  Q
    |||||||||| |||  ||||||||||| |||||||||||| | |||| |||| |||||  |||||||| ||||    
T  7750066 tagttaaaaaatataatcaaaataaattatatgaatagtgcacattgtaaaattacgacgtgtattttaaaat 7750138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 22083001 - 22083045
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaat 87  Q
    |||||||||||||  |||||||| ||||||||||||||| |||||    
T  22083001 gtgacatagagttgtgtgacattaatgacattgaccaatcacaat 22083045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 9e-38; HSPs: 86)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 516 - 640
Target Start/End: Original strand, 11641210 - 11641334
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  11641210 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 11641309  T
Q  616 attttgaaatcgagggagtatattt 640  Q
    |||||||||| ||||||||||||||    
T  11641310 attttgaaatggagggagtatattt 11641334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 48994052 - 48993925
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||   |||| |||||||||||||||||||||||||||| |||| | |||||||| |    
T  48994052 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 48993953  T
Q  143 caatgtcatcaatgtcacccaactctat 170  Q
    |||||||| |||||||||||||||||||    
T  48993952 caatgtcaccaatgtcacccaactctat 48993925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 516 - 636
Target Start/End: Original strand, 6402553 - 6402673
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||  ||||||||| | |||||||||||  || ||||    
T  6402553 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaagtgaatagtgcacattgcaaaaattggacatgt 6402652  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||  ||||||||||    
T  6402653 attttgaaacggagggagtat 6402673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 43 - 176
Target Start/End: Complemental strand, 29179732 - 29179599
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| | |||||||| |    
T  29179732 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 29179633  T
Q  143 caatgtcatcaatgtcacccaactctatatcatc 176  Q
    || ||||| ||||||||||||||||||| |||||    
T  29179632 cagtgtcaccaatgtcacccaactctatgtcatc 29179599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 516 - 637
Target Start/End: Original strand, 36757629 - 36757750
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  36757629 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 36757728  T
Q  616 attttgaaatcgagggagtata 637  Q
    |||||||||| || ||||||||    
T  36757729 attttgaaatggatggagtata 36757750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 9157309 - 9157420
Alignment:
Q  39 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgat 138  Q
    ||||||||||||||||| |||||||||| | |||||||||||| |||||||  |||| |||||||||||||||||||| ||||||| |||||| ||||||    
T  9157309 ttgtgtgacatagagttgggtgacattggtaacattgaccaatcacaatgtcacaatgcttgtgtttctctctctttctcaagcattgtgatattgtgat 9157408  T
Q  139 tgatcaatgtca 150  Q
    ||||||||||||    
T  9157409 tgatcaatgtca 9157420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 32540883 - 32540756
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    |||||||||| || | |||||||| |||||||||||||| |||||||| |||| |||||||||||||||||||||||||||| |||| | ||||||||      
T  32540883 gtgacatagaattggatgacattggtgacattgaccaatcacaatgttacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggc 32540784  T
Q  143 caatgtcatcaatgtcacccaactctat 170  Q
    ||||| || |||||||||||||||||||    
T  32540783 caatgccaccaatgtcacccaactctat 32540756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 516 - 638
Target Start/End: Original strand, 40771915 - 40772037
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||  ||||||||| | |||| ||||||  || ||||    
T  40771915 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgtaaaaattggacatgt 40772014  T
Q  616 attttgaaatcgagggagtatat 638  Q
    |||||||||  ||||||||||||    
T  40772015 attttgaaacggagggagtatat 40772037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 495 - 624
Target Start/End: Original strand, 28030803 - 28030932
Alignment:
Q  495 aatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgta 594  Q
    ||||||||  |||| |||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| | |||| || |    
T  28030803 aatatttatcgaaacaaattgaacaatatcttacatgctaacatttgtatttatatgttagttaaaaagtatggtcaaaataagtcatgtaaataatgca 28030902  T
Q  595 tattgcaaaaatacgaaatgtattttgaaa 624  Q
     ||||||||||| | | |||||||||||||    
T  28030903 cattgcaaaaatgcaacatgtattttgaaa 28030932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 519 - 638
Target Start/End: Complemental strand, 6766488 - 6766369
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtatt 618  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||   | |||||||    
T  6766488 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtatt 6766389  T
Q  619 ttgaaatcgagggagtatat 638  Q
    ||||||  ||||||||||||    
T  6766388 ttgaaacggagggagtatat 6766369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 17127699 - 17127568
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    |||| |||||||| |||||||||  |||||||||||||| | |||||  |||| |||||||||||||||||||||||||||| |||| | |||||||| |    
T  17127699 gtgatatagagttaggtgacattagtgacattgaccaatcaaaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 17127600  T
Q  143 caatgtcatcaatgtcacccaactctatatca 174  Q
    ||||||||  ||||||||| ||||||||||||    
T  17127599 caatgtcactaatgtcacctaactctatatca 17127568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 516 - 640
Target Start/End: Original strand, 16120583 - 16120707
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||  |||||| || | |||||||||||  || ||||    
T  16120583 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgt 16120682  T
Q  616 attttgaaatcgagggagtatattt 640  Q
    |||||||||  ||||||||| ||||    
T  16120683 attttgaaacggagggagtaaattt 16120707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 5995372 - 5995499
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||||| |||||||| | |||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||  | |||||||| |    
T  5995372 gtgacatagagtttgatgacattggtaacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtggcattgtgattggt 5995471  T
Q  143 caatgtcatcaatgtcacccaactctat 170  Q
    |||||||| |||||||| ||||||||||    
T  5995472 caatgtcaccaatgtcatccaactctat 5995499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 516 - 637
Target Start/End: Complemental strand, 30003652 - 30003531
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| | ||| |||||||  || ||||    
T  30003652 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatgt 30003553  T
Q  616 attttgaaatcgagggagtata 637  Q
    |||||||||  || ||||||||    
T  30003552 attttgaaacggatggagtata 30003531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 491 - 636
Target Start/End: Original strand, 44647831 - 44647976
Alignment:
Q  491 tgtaaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatag 590  Q
    |||||||| |||  |||| |||| ||||||||||||||||||||| |||||||||||||| || |||||||| |||| ||||||||| |||| ||||||     
T  44647831 tgtaaatagttatcgaaacaaattgaacaacatcttacatgctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaataa 44647930  T
Q  591 tgtatattgcaaaaatacgaaatgtattttgaaatcgagggagtat 636  Q
    |  | |||| |||||| ||| ||||||||| |||| ||||||||||    
T  44647931 tacacattgaaaaaatgcgacatgtattttaaaatggagggagtat 44647976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 516 - 636
Target Start/End: Complemental strand, 17306073 - 17305953
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  17306073 aacaacatcttacatgctaatatttgtatttatatattaattaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 17305974  T
Q  616 attttgaaatcgagggagtat 636  Q
    ||||| |||  ||||||||||    
T  17305973 attttaaaacggagggagtat 17305953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 33219599 - 33219703
Alignment:
Q  66 gatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaac 165  Q
    ||||||||||| |||| |||||||| |||| ||||||||| ||||||||||||||||||  ||| | |||||||||||||||||| |||||||| |||||    
T  33219599 gatgacattgatcaatcacaatgttacaatgcttgtgtttttctctctttcacaagcattatgacattgtgattgatcaatgtcaccaatgtcatccaac 33219698  T
Q  166 tctat 170  Q
    |||||    
T  33219699 tctat 33219703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 493 - 625
Target Start/End: Original strand, 38153397 - 38153529
Alignment:
Q  493 taaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 592  Q
    ||||||||||  |||| |||| ||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||| | | ||| |||| |||||||||    
T  38153397 taaatatttatcgaaacaaatcgaagaacatcttacatgataacatttgtatttatatgttagttaaaaagtatggtaacagtaagtcatgtgaatagtg 38153496  T
Q  593 tatattgcaaaaatacgaaatgtattttgaaat 625  Q
     | |||  |||||| ||| ||||||||||||||    
T  38153497 cacattataaaaatgcgacatgtattttgaaat 38153529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 516 - 636
Target Start/End: Original strand, 42788685 - 42788805
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| | ||| |||||||  || || |    
T  42788685 aacaacatcttacatgcaaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatat 42788784  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||| ||||||||||    
T  42788785 attttgaaatggagggagtat 42788805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 519 - 638
Target Start/End: Complemental strand, 27292756 - 27292637
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtatt 618  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| |||||| |||||||  ||||||||| | |||||||||||  || || ||||    
T  27292756 aacatcttacatgctaatatttgtatttatactttagttaaaaagtatagtcaaagtaaatcaagtgaatagtgcagattgcaaaaattggacatatatt 27292657  T
Q  619 ttgaaatcgagggagtatat 638  Q
    ||||||  ||||||| ||||    
T  27292656 ttgaaacggagggagcatat 27292637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 37155049 - 37155156
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||  |||| ||||||||||||||||||||||||| || |||| | ||||||||      
T  37155049 gtgacatagagtttggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgtttctctctctttcacaagtattgtgacattgtgattggc 37155148  T
Q  143 caatgtca 150  Q
    ||||||||    
T  37155149 caatgtca 37155156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 33 - 130
Target Start/End: Complemental strand, 36290552 - 36290455
Alignment:
Q  33 tagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgat 130  Q
    ||||| ||| ||||||||||||| |||||||||| || ||||||||||| |||||||  ||||| ||||||||||||||||||||||||||| |||||    
T  36290552 tagtacttgggtgacatagagttgggtgacattggtggcattgaccaatcacaatgtcacaatatttgtgtttctctctctttcacaagcattgtgat 36290455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 516 - 637
Target Start/End: Complemental strand, 24321380 - 24321257
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaa--gtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaat 613  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||||   |||||||||| |||||||  ||||||||| | ||||||||||| ||| ||    
T  24321380 aacaatatcttacatgctaatatttgtatttatacattagttaaaaattatatggtcaaagtaaatcaagtgaatagtgcacattgcaaaaattcgacat 24321281  T
Q  614 gtattttgaaatcgagggagtata 637  Q
    ||||||| |||  |||||||||||    
T  24321280 gtattttaaaacggagggagtata 24321257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 516 - 636
Target Start/End: Complemental strand, 30701837 - 30701717
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||| |||||||||| ||| |||  ||||||||| | ||| |||||||  || ||||    
T  30701837 aacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatgt 30701738  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||  ||||||||||    
T  30701737 attttgaaacggagggagtat 30701717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 516 - 621
Target Start/End: Original strand, 40977631 - 40977736
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| | | |||  ||||||||  | |||||||||||  || ||||    
T  40977631 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagttagtcaagtgaatagtacacattgcaaaaattggacatgt 40977730  T
Q  616 attttg 621  Q
    ||||||    
T  40977731 attttg 40977736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 36399217 - 36399109
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||| |||||||||| ||| | |  ||||||||| | |||||||||||  || ||||    
T  36399217 aacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgcaaaaattggacatgt 36399118  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  36399117 attttgaaa 36399109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 44706926 - 44706838
Alignment:
Q  36 tatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 124  Q
    |||||| ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| ||||||||||||||||||||||||||||    
T  44706926 tatttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccgcaatgcttgtgtttctctctctttcacaagcat 44706838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 4608995 - 4609106
Alignment:
Q  39 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgat 138  Q
    |||||||| || ||||| |||||||| | ||||||||||| || |||||||  ||||  ||||||||||||||||||||||||||| |||| | ||||||    
T  4608995 ttgtgtgatatggagttgggtgacatcggtgacattgacccatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgat 4609094  T
Q  139 tgatcaatgtca 150  Q
    ||| ||||||||    
T  4609095 tgaccaatgtca 4609106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 516 - 638
Target Start/End: Complemental strand, 26910195 - 26910073
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||| |||||| |||| |||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||   | ||||    
T  26910195 aacatcatcttgcatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattatacatgt 26910096  T
Q  616 attttgaaatcgagggagtatat 638  Q
    ||||| |||| |||||| |||||    
T  26910095 attttaaaatggagggaatatat 26910073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 1091679 - 1091582
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattg 140  Q
    ||||||||||||| ||||| |||| |||| ||||||||| |||||||  ||||  ||||||||||||||||||||||||||| |||| | ||||||||    
T  1091679 gtgacatagagttgggtgatattggtgactttgaccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattg 1091582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 516 - 636
Target Start/End: Complemental strand, 52024145 - 52024025
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||| |||||||||| ||||||||  ||||||||||| |||||||||| ||| | |  ||||||||| | |||||||||||   | ||||    
T  52024145 aacaacatcttacacgctaatatttatatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgcaaaaattgaacatgt 52024046  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||  ||||||||||    
T  52024045 attttgaaacggagggagtat 52024025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 15220863 - 15220941
Alignment:
Q  92 caatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    |||| |||||||||||||||||||||||||||| |||| | ||||||||  |||| ||| |||||||||||||||||||    
T  15220863 caatgcttgtgtttctctctctttcacaagcattgtgagattgtgattggccaatatcaccaatgtcacccaactctat 15220941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 68 - 170
Target Start/End: Original strand, 29371396 - 29371498
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactc 167  Q
    |||||||| ||||| |||||||  ||||  ||||||||||||||||||||||||||| |||| | |||||||| ||||| ||| |||||||||| | |||    
T  29371396 tgacattggccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaatatcaccaatgtcacctagctc 29371495  T
Q  168 tat 170  Q
    |||    
T  29371496 tat 29371498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 45728294 - 45728396
Alignment:
Q  47 catagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaat 146  Q
    ||||||||| ||||| |||| ||| |||||||||| ||||| |  |||| ||||||||||||||||||||||||||||  ||| | ||||||||| ||||    
T  45728294 catagagttgggtgatattggtgatattgaccaatcacaatatcacaatgcttgtgtttctctctctttcacaagcattatgacattgtgattgaccaat 45728393  T
Q  147 gtc 149  Q
    |||    
T  45728394 gtc 45728396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 46334058 - 46333972
Alignment:
Q  66 gatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatc 152  Q
    |||||||||||||||| |||||||  |||| ||||||||| |||||||||||||||||| |||| | ||||||||  ||||||||||    
T  46334058 gatgacattgaccaatcacaatgtcacaatgcttgtgtttttctctctttcacaagcattgtgacattgtgattggccaatgtcatc 46333972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 21630045 - 21630118
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttc 116  Q
    |||||||| |||| |||||||||| |||||||||||||| |||||||  |||| ||||||||||||||||||||    
T  21630045 gtgacataaagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgtttctctctctttc 21630118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 42735308 - 42735419
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagtt---aaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaa 612  Q
    |||| |||||||||||||||||||||||||||||| ||||||   |||||||||||||||| ||| |||  ||||||||| | ||||||| |||   | |    
T  42735308 aacatcatcttacatgctaatatttgtatttatatattagttaaaaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaataattgaaca 42735407  T
Q  613 tgtattttgaaa 624  Q
    ||||||||||||    
T  42735408 tgtattttgaaa 42735419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 516 - 620
Target Start/End: Original strand, 3485350 - 3485454
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||| |||||||| ||| |||||||||||||| ||||||||||| |||| ||||| ||| | ||  |||||||| |||||| |||| ||||| ||||    
T  3485350 aacaacaccttacatgataacatttgtatttatatattagttaaaaaatatgatcaaagtaagttatgcgaatagtgcatattgtaaaattacgacatgt 3485449  T
Q  616 atttt 620  Q
    |||||    
T  3485450 atttt 3485454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 9342788 - 9342896
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||| ||||| ||| |||  ||||||  | | |||||||||||  || ||||    
T  9342788 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatgatcaaagtaagtcaagtgaataacgcacattgcaaaaattagacatgt 9342887  T
Q  616 attttgaaa 624  Q
     ||||||||    
T  9342888 tttttgaaa 9342896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 15382569 - 15382677
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||| ||||||||||||||||||| ||| |||||||   |||||| | ||| | || ||||||||||| |||| |||| | ||| ||||    
T  15382569 aacaacatcttacatactaatatttgtatttatatattatttaaaaaaattggtcagagtaagttatgtgaatagtgtacattgtaaaattgcgacatgt 15382668  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  15382669 attttgaaa 15382677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 519 - 635
Target Start/End: Original strand, 30385291 - 30385407
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtatt 618  Q
    |||||||||||| |||| |||||||||||||| ||||||||||| |||||||||| ||||  || ||||||||| | |||  |||| | ||| |||||||    
T  30385291 aacatcttacatactaacatttgtatttatatattagttaaaaaatatggtcaaagtaaactatgtgaatagtgcacattataaaattgcgacatgtatt 30385390  T
Q  619 ttgaaatcgagggagta 635  Q
    || |||| || ||||||    
T  30385391 ttaaaatagatggagta 30385407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 494 - 589
Target Start/End: Complemental strand, 14777173 - 14777078
Alignment:
Q  494 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaata 589  Q
    ||||||| ||||||||||||  |||||||||||||||  ||||||||||||||||||   ||||||||| |||| ||||| ||||  |||||||||    
T  14777173 aaatattaactgaaataaatcaaacaacatcttacatattaatatttgtatttatataacagttaaaaaatatgatcaaagtaaactatatgaata 14777078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 523 - 606
Target Start/End: Complemental strand, 48375114 - 48375031
Alignment:
Q  523 tcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaat 606  Q
    |||||||||||||||||||||||||||  ||||||||||| |||| ||||||||| | |  |||||| |||| |||||||||||    
T  48375114 tcttacatgctaatatttgtatttataaattagttaaaaaatatgatcaaaataagttaagtgaataatgtacattgcaaaaat 48375031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 49445021 - 49444921
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactc 167  Q
    |||||||| ||||| ||||||   |||| |||||||||||||||||  ||||||||| || | | ||||||||||| |||||| ||||||||||||||||    
T  49445021 tgacattggccaatcacaatgccacaatgcttgtgtttctctctct--cacaagcattgtaacattgtgattgatcgatgtcaccaatgtcacccaactc 49444924  T
Q  168 tat 170  Q
    |||    
T  49444923 tat 49444921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 516 - 622
Target Start/End: Original strand, 15912479 - 15912585
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||||||||||||||||||| |  | | | |||||||||||||||| ||| |||  ||||||||| | |||| ||||||  || ||||    
T  15912479 aacaacatcttacatgctaatatttgtatttaaaaataaataaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgt 15912578  T
Q  616 attttga 622  Q
    |||||||    
T  15912579 attttga 15912585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 1819570 - 1819517
Alignment:
Q  97 cttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    |||||||||||||||||||||||||||| |||| | ||||||||||||||||||    
T  1819570 cttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatgtca 1819517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 28395628 - 28395708
Alignment:
Q  31 ggtagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctct 111  Q
    ||||| ||||| || ||||||||||  ||||||||| |||||||||||||| |||||||  |||| |||||||||||||||    
T  28395628 ggtagcatttgggtaacatagagttgagtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgtttctctct 28395708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 528 - 636
Target Start/End: Original strand, 44644510 - 44644618
Alignment:
Q  528 catgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtattttgaaatcg 627  Q
    |||||||| |||||||||||||| || |||||||| |||| ||||| ||| |||| |||||| |  | |||| |||||| ||| ||||||||| |||| |    
T  44644510 catgctaacatttgtatttatatatttgttaaaaaatatgatcaaagtaagtcatgtgaataatacacattgaaaaaatgcgacatgtattttaaaatgg 44644609  T
Q  628 agggagtat 636  Q
    |||||||||    
T  44644610 agggagtat 44644618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 516 - 567
Target Start/End: Original strand, 22575730 - 22575781
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatg 567  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| ||||    
T  22575730 aacaacatcttacatgctaacatttgtatttatatattagttaaaaaatatg 22575781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 48498418 - 48498525
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| |||||||||  ||||||||  |||| | |||    ||||  |||||||||||||||||||||||||||||| | | |||||||| |    
T  48498418 gtgacatagagttgggtgacatttgtgacattggtcaatcataataccacaatgtttgtgtttctctctctttcacaagcatggtaacattgtgattggt 48498517  T
Q  143 caatgtca 150  Q
    ||||||||    
T  48498518 caatgtca 48498525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 5694999 - 5694918
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    ||||||||  ||||||||||||  ||||| |||||||||||||||||||||||||||  | ||| ||||||||| ||||||||    
T  5694999 tgacattggtcaattacaatgtcacaatatttgtgtttctctctctttcacaagcat-ttaatattgtgattgaccaatgtca 5694918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 8337961 - 8337879
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    |||||||||||||| ||||||   ||||  ||||||||||||||||||||||| ||| |||| | ||||||||| ||||||||    
T  8337961 tgacattgaccaatcacaatgccacaatgtttgtgtttctctctctttcacaaacattgtgacattgtgattgaccaatgtca 8337879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 491 - 637
Target Start/End: Original strand, 19711810 - 19711952
Alignment:
Q  491 tgtaaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatag 590  Q
    ||||||||||||  |||| ||||  |||| ||||||||||||||  | |||||||||||||||||||||||| ||| || |    || |||  | |||||    
T  19711810 tgtaaatatttatcgaaacaaatttaacagcatcttacatgctatcacttgtatttatatgttagttaaaaaatatagtta----aagtcacgtaaatag 19711905  T
Q  591 tgtatattgcaaaaatacgaaatgtattttgaaatcgagggagtata 637  Q
    || |  |||||||||| ||| |||||||||||||  |||||||||||    
T  19711906 tgcacgttgcaaaaatgcgatatgtattttgaaacagagggagtata 19711952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 572
Target Start/End: Complemental strand, 31445042 - 31444986
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaa 572  Q
    ||||||||||||||||| || |||||| ||||||| ||||||||||| |||||||||    
T  31445042 aacaacatcttacatgcaaacatttgtgtttatatattagttaaaaaatatggtcaa 31444986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 635
Target Start/End: Original strand, 40800530 - 40800649
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagtt-aaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatg 614  Q
    |||||||||||||||||||| ||||||| |||||| |||||| ||||| |||||||||| ||| | || ||| || || | |||| |||| ||||| ||     
T  40800530 aacaacatcttacatgctaacatttgta-ttatatattagttaaaaaaatatggtcaaagtaagttatgtgattaatgcacattgtaaaattacgacata 40800628  T
Q  615 tattttgaaatcgagggagta 635  Q
    ||||||||||| ||| |||||    
T  40800629 tattttgaaatggagagagta 40800649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 741597 - 741530
Alignment:
Q  83 acaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    |||||||  |||| |||||||||||||||||||||||||||| |||| | ||||||||  ||||||||    
T  741597 acaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgggcaatgtca 741530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 519 - 606
Target Start/End: Complemental strand, 4302234 - 4302147
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaat 606  Q
    |||||||||||||||||||||| ||||||||  |||||||||||  ||  ||||| ||| |||  | ||||||||| |||||||||||    
T  4302234 aacatcttacatgctaatatttatatttatacattagttaaaaaacattatcaaagtaagtcaagtaaatagtgtacattgcaaaaat 4302147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 577
Target Start/End: Complemental strand, 9881401 - 9881334
Alignment:
Q  510 aaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataa 577  Q
    |||| ||||||||||||||||| ||| |||| ||| ||||| ||||||||||| |||||| |||||||    
T  9881401 aaatcgaacaacatcttacatgataacatttatatgtatatattagttaaaaattatggttaaaataa 9881334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 48993920 - 48993979
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  48993920 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 48993979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 597
Target Start/End: Complemental strand, 324056 - 323951
Alignment:
Q  494 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaa--aaagtatggtcaaaataaatcatatgaatagt 591  Q
    |||||||||  |||| |||| |||| |||  |||||||||||||||||||||||||| | ||||||  |||  ||  ||||||||||| ||||||||| |    
T  324056 aaatatttatcgaaacaaatcgaactacaatttacatgctaatatttgtatttatatataagttaaacaaatcattatcaaaataaattatatgaataat 323957  T
Q  592 gtatat 597  Q
    ||||||    
T  323956 gtatat 323951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 34062237 - 34062319
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    |||||||| ||||| ||||||   |||| ||| |||||||||||||||||||| ||| |||| | |||||||| |||||||||    
T  34062237 tgacattggccaatcacaatgccacaatgcttatgtttctctctctttcacaaacattgtgacattgtgattggtcaatgtca 34062319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 150
Target Start/End: Original strand, 47303427 - 47303505
Alignment:
Q  72 attgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    |||||||||| |||||||   |||  ||||||||||||||||||||||| ||| |||| | ||||||||| ||||||||    
T  47303427 attgaccaatcacaatgtcataatgtttgtgtttctctctctttcacaaacattgtgacattgtgattgaccaatgtca 47303505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 48605057 - 48604975
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    |||||||| ||||||| |||||  |||| |||| |||||||||||||||||||  || |||| | ||||||||| ||||||||    
T  48605057 tgacattggccaattataatgtcacaatgcttgcgtttctctctctttcacaaatattgtgacattgtgattgaccaatgtca 48604975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 549
Target Start/End: Complemental strand, 25171273 - 25171240
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttata 549  Q
    ||||||||||||||||||||||||||||||||||    
T  25171273 aacaacatcttacatgctaatatttgtatttata 25171240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 17127563 - 17127626
Alignment:
Q  39 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    |||||||| |||||||| |||||||||  |||||||||||||| |||||||  |||| ||||||    
T  17127563 ttgtgtgatatagagttaggtgacattagtgacattgaccaatcacaatgtcacaatgcttgtg 17127626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 29371507 - 29371444
Alignment:
Q  39 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    ||||||||||||||| | |||||||||| ||| |||||||||| |||||||  |||| ||||||    
T  29371507 ttgtgtgacatagagctaggtgacattggtgatattgaccaatcacaatgtcacaatgcttgtg 29371444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 522 - 573
Target Start/End: Complemental strand, 32898623 - 32898572
Alignment:
Q  522 atcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    ||||||||| ||||||||| ||||||||||||  ||||||| ||||||||||    
T  32898623 atcttacatactaatatttatatttatatgttgcttaaaaattatggtcaaa 32898572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 590
Target Start/End: Original strand, 42367442 - 42367513
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatag 590  Q
    ||||||||||||| || ||||||||||||||  ||||||||||| |||| ||||| ||| |||  |||||||    
T  42367442 aacatcttacatgttagtatttgtatttatacattagttaaaaattatgatcaaagtaagtcaagtgaatag 42367513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 49444916 - 49444975
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    ||||||||||||| |||||||||| |||||| || |||| |||||||| |||| ||||||    
T  49444916 gtgacatagagttgggtgacattggtgacatcgatcaatcacaatgttacaatgcttgtg 49444975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 9157372 - 9157318
Alignment:
Q  116 cacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    ||||||||| |||| | |||||||| ||||||| | |||||||||||||||||||    
T  9157372 cacaagcattgtgacattgtgattggtcaatgttaccaatgtcacccaactctat 9157318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 21630104 - 21630054
Alignment:
Q  116 cacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaact 166  Q
    ||||||||| |||| | |||||||| ||||||||| |||||||||||||||    
T  21630104 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaact 21630054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 29179601 - 29179659
Alignment:
Q  44 tgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    |||||||||||| |||||||||| ||||| |||||||| |||||||  |||| ||||||    
T  29179601 tgacatagagttgggtgacattggtgacactgaccaatcacaatgtcacaatgcttgtg 29179659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 577
Target Start/End: Complemental strand, 34635019 - 34634965
Alignment:
Q  523 tcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataa 577  Q
    ||||||||| ||| |||||||||||||| ||||||||||| |||  |||||||||    
T  34635019 tcttacatgttaacatttgtatttatatattagttaaaaaatattatcaaaataa 34634965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 45728349 - 45728295
Alignment:
Q  116 cacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    ||||||||| |||||| |||||||| ||||| ||| |||| ||||||||||||||    
T  45728349 cacaagcattgtgatattgtgattggtcaatatcaccaatatcacccaactctat 45728295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 48993993 - 48994047
Alignment:
Q  116 cacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    ||||||||| |||  | |||||||| ||||||||| |||||||||||||||||||    
T  48993993 cacaagcattgtggcattgtgattggtcaatgtcaccaatgtcacccaactctat 48994047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 5995504 - 5995459
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 88  Q
    ||||||||||||| | |||||||| |||||||||||||| ||||||    
T  5995504 gtgacatagagttggatgacattggtgacattgaccaatcacaatg 5995459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 565
Target Start/End: Original strand, 7568629 - 7568678
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagta 565  Q
    ||||||||||||||  |||| |||| ||||||||| ||||||||||||||    
T  7568629 aacaacatcttacacactaacatttatatttatatattagttaaaaagta 7568678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 46932000 - 46932045
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 88  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||    
T  46932000 gtgacatagagttgggtgacattggtgacattggccaatcacaatg 46932045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 46932116 - 46932072
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 88  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||    
T  46932116 gtgacatagagtt-ggtgacattggtgacattgaccaatcacaatg 46932072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 516 - 620
Target Start/End: Complemental strand, 5068879 - 5068775
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||  ||  |||| ||||||||| ||| || |||| |||  ||||||||||| |||| |||||||  ||||  ||||||| || ||||    
T  5068879 aacaacatcttacattttatcatttatatttatatattaatttaaaaatataatcaaaataaattatataaatagtgagtattataaaaatatgacatgt 5068780  T
Q  616 atttt 620  Q
    |||||    
T  5068779 atttt 5068775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 15220958 - 15220902
Alignment:
Q  31 ggtagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaat 87  Q
    ||||| ||||| ||||||||||||| |||||||||| ||| |||| ||||| |||||    
T  15220958 ggtagcatttgggtgacatagagttgggtgacattggtgatattggccaatcacaat 15220902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 19711313 - 19711208
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    |||| ||| ||||||||||||||| | |||||| |  ||||||||||  |||| ||| |||||||  |||||||||| |||| || | | |||||||| |    
T  19711313 gtgatataaagtttggtgacattggtaacattggctgattacaatgtcacaattcttatgtttct--ctctttcacatgcattgtaacattgtgattggt 19711216  T
Q  143 caatgtca 150  Q
    ||||||||    
T  19711215 caatgtca 19711208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 494 - 562
Target Start/End: Complemental strand, 19895357 - 19895289
Alignment:
Q  494 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 562  Q
    |||||||||  || |||||  ||||||||||||||||  |||||||||| ||||||| ||| |||||||    
T  19895357 aaatatttatcgagataaaacgaacaacatcttacatattaatatttgtgtttatatattaattaaaaa 19895289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 494 - 562
Target Start/End: Complemental strand, 21364891 - 21364823
Alignment:
Q  494 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 562  Q
    ||||||||| ||| ||| || ||||||||| ||||||||||| || ||||||| ||| | |||||||||    
T  21364891 aaatatttattgagatagatcgaacaacatattacatgctaacatatgtatttctatataagttaaaaa 21364823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 28928859 - 28928807
Alignment:
Q  98 ttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    ||||||||||||||||||||||||||  |||| | ||||||||  ||||||||    
T  28928859 ttgtgtttctctctctttcacaagcactgtgacattgtgattggccaatgtca 28928807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 525 - 624
Target Start/End: Original strand, 48526836 - 48526935
Alignment:
Q  525 ttacatgctaatatttgtatttata-tgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtattttgaa 623  Q
    |||||| |||| |||| |||||||| | ||| ||||||| |||||||||| |||||||| | |||| |||| ||||||||||| | | || |||||||||    
T  48526836 ttacatactaacatttatatttataatattaattaaaaa-tatggtcaaagtaaatcatgtaaataatgtacattgcaaaaatgcaatatctattttgaa 48526934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 3e-37; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 5033164 - 5033291
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||   |||| |||||||||||||||||||||||||||| |||| | |||||||| |    
T  5033164 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 5033263  T
Q  143 caatgtcatcaatgtcacccaactctat 170  Q
    |||||||| |||||||||||||||||||    
T  5033264 caatgtcaccaatgtcacccaactctat 5033291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 33841726 - 33841599
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| |||||||||| |||||||||||||| | ||||   |||| |||||||||||||||||||||||||||| |||| | |||||||| |    
T  33841726 gtgacatagagttgggtgacattggtgacattgaccaatcagaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacaatgtgattggt 33841627  T
Q  143 caatgtcatcaatgtcacccaactctat 170  Q
    |||||||| |||||||||||||||||||    
T  33841626 caatgtcaccaatgtcacccaactctat 33841599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 43 - 169
Target Start/End: Complemental strand, 35441104 - 35440978
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| | |||||||| |    
T  35441104 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 35441005  T
Q  143 caatgtcatcaatgtcacccaactcta 169  Q
    |||||||| ||||||||||||||||||    
T  35441004 caatgtcaccaatgtcacccaactcta 35440978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 516 - 636
Target Start/End: Complemental strand, 616902 - 616782
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  616902 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 616803  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||  ||||||||||    
T  616802 attttgaaacggagggagtat 616782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 516 - 636
Target Start/End: Complemental strand, 623295 - 623175
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  623295 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 623196  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||  ||||||||||    
T  623195 attttgaaacggagggagtat 623175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 516 - 636
Target Start/End: Original strand, 42587391 - 42587511
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  42587391 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 42587490  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||  ||||||||||    
T  42587491 attttgaaacggagggagtat 42587511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 40494503 - 40494395
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||| ||||||  || ||||    
T  40494503 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattggaaaaattggacatgt 40494404  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  40494403 attttgaaa 40494395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 516 - 635
Target Start/End: Complemental strand, 41263929 - 41263810
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  41263929 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggatatgt 41263830  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||| ||| |||||    
T  41263829 attttgaaatggagagagta 41263810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 518 - 624
Target Start/End: Original strand, 3100640 - 3100746
Alignment:
Q  518 caacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtat 617  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||  | ||||||| | |||||||||||  || ||||||    
T  3100640 caacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtaaatagtgcacattgcaaaaattggacatgtat 3100739  T
Q  618 tttgaaa 624  Q
    |||||||    
T  3100740 tttgaaa 3100746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 516 - 640
Target Start/End: Original strand, 13216864 - 13216988
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||| ||||||||||||| ||||||||  |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  13216864 aacaacatctttcatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgt 13216963  T
Q  616 attttgaaatcgagggagtatattt 640  Q
    ||||||||||  | |||||||||||    
T  13216964 attttgaaatgtaaggagtatattt 13216988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 14237399 - 14237291
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  14237399 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 14237300  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  14237299 attttgaaa 14237291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 18044544 - 18044436
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  18044544 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 18044445  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  18044444 attttgaaa 18044436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 32998569 - 32998461
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  32998569 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 32998470  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  32998469 attttgaaa 32998461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 38957289 - 38957181
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||  | ||||||| | |||||||||||  || || |    
T  38957289 aacaacatcttacatgctaatatttgtatttatacgttagttaaaaaatatggtcaaagtaaatcaagttaatagtgcacattgcaaaaattggacatat 38957190  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  38957189 attttgaaa 38957181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 43 - 177
Target Start/End: Original strand, 10086760 - 10086894
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    |||||||||| || |||||||||  ||||||||  |||| |||||||   |||  ||||||||||||||||||||||| ||| |||| | |||||||| |    
T  10086760 gtgacatagaattgggtgacattagtgacattggtcaatcacaatgtcataatgtttgtgtttctctctctttcacaaacattgtgacattgtgattggt 10086859  T
Q  143 caatgtcatcaatgtcacccaactctatatcatca 177  Q
    |||||||| ||||||||||||||||||| ||||||    
T  10086860 caatgtcaccaatgtcacccaactctatgtcatca 10086894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 2766191 - 2766299
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||| |||  | ||||||| | |||||||||||  || ||||    
T  2766191 aacaacatcttacatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaattggatatgt 2766290  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  2766291 attttgaaa 2766299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 516 - 635
Target Start/End: Original strand, 36642001 - 36642121
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagt-atggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatg 614  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||| ||| |||  ||||||||| | |||||||||||   | |||    
T  36642001 aacaacatcttacatgctaatatttgtatttatatataagttaaaaagtaatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatg 36642100  T
Q  615 tattttgaaatcgagggagta 635  Q
    ||||||||||  |||||||||    
T  36642101 tattttgaaacggagggagta 36642121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 45191262 - 45191135
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| | ||| |||| |||||||||||||| | |||||| ||||  |||||||||||||||||||| |||||| |||  | ||||||| ||    
T  45191262 gtgacatagagttggatgatattggtgacattgaccaatcaaaatgttacaatgtttgtgtttctctctctttcataagcattgtggcattgtgattaat 45191163  T
Q  143 caatgtcatcaatgtcacccaactctat 170  Q
    |||||||| |||| ||| ||||||||||    
T  45191162 caatgtcaccaatatcatccaactctat 45191135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 35403635 - 35403527
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||| |||||| ||||||||||  |||||||||||||||||||||| ||  |||  ||||||||| | |||||||||||  || ||||    
T  35403635 aacaacatcttacatgttaatatctgtatttatacattagttaaaaagtatggtcaaagtatgtcaagtgaatagtgcacattgcaaaaattggacatgt 35403536  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  35403535 attttgaaa 35403527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 516 - 635
Target Start/End: Complemental strand, 132136 - 132017
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||| ||||| ||| |||  ||||||||| |  |||||||||   || ||||    
T  132136 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatgatcaaagtaagtcaagtgaatagtgcacgttgcaaaaagtggacatgt 132037  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  132036 attttgaaacggagggagta 132017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 8243523 - 8243416
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| |||||||||| |||| |||  |||| ||||||   |||| |||||||||||||||||||||||||||| |||  | ||||||||||    
T  8243523 gtgacatagagttgggtgacattggtgacgttggtcaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtggcattgtgattgat 8243424  T
Q  143 caatgtca 150  Q
    ||||||||    
T  8243423 caatgtca 8243416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 34229640 - 34229751
Alignment:
Q  39 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgat 138  Q
    ||||||||||||||||| |||||||||  ||||||    |||| |||||||   ||| |||||||||||||||||||||||||||| |||||| ||||||    
T  34229640 ttgtgtgacatagagttgggtgacattagtgacatgagtcaatcacaatgtcagaatgcttgtgtttctctctctttcacaagcattgtgatattgtgat 34229739  T
Q  139 tgatcaatgtca 150  Q
    ||| ||||||||    
T  34229740 tgaccaatgtca 34229751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 519 - 604
Target Start/End: Complemental strand, 5173367 - 5173282
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 604  Q
    ||||||||||||| |||||||||||||||||| ||||||||| | |||| ||||| |||||||||||||||||  | |||||||||    
T  5173367 aacatcttacatgttaatatttgtatttatatattagttaaataatatgatcaaagtaaatcatatgaatagtacacattgcaaaa 5173282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 522 - 635
Target Start/End: Complemental strand, 5878429 - 5878317
Alignment:
Q  522 atcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtattttg 621  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||| |||  ||||||||| | |||||||||||  || |||||||| |    
T  5878429 atcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaat-ggacatgtatttgg 5878331  T
Q  622 aaatcgagggagta 635  Q
    |||  |||||||||    
T  5878330 aaacggagggagta 5878317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 5667100 - 5667227
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| | |||||||| ||||||||  |||| |||||||  |||| ||||| ||||||||||||||||||||||  ||| | ||| ||||      
T  5667100 gtgacatagagttggatgacattggtgacattggtcaatcacaatgtcacaatgcttgtatttctctctctttcacaagcattatgacattgtaattggc 5667199  T
Q  143 caatgtcatcaatgtcacccaactctat 170  Q
    |||||||| |||||||| | ||||||||    
T  5667200 caatgtcaccaatgtcatcaaactctat 5667227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 516 - 635
Target Start/End: Complemental strand, 8394465 - 8394346
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||| || |||||||||||| |||||  ||||||||||| | |||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  8394465 aacaacatcttaaatactaatatttgtacttatacattagttaaaaaatttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgt 8394366  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  8394365 attttgaaacggagggagta 8394346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 606
Target Start/End: Complemental strand, 11637901 - 11637811
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaat 606  Q
    |||||||||||||||||||||| |||||||||||   ||||||||||||| ||||||||||| |||  ||||||||| | |||| ||||||    
T  11637901 aacaacatcttacatgctaatacttgtatttatacactagttaaaaagtacggtcaaaataagtcaagtgaatagtgcacattgtaaaaat 11637811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 43 - 176
Target Start/End: Complemental strand, 43844604 - 43844473
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| | |||||||| ||| ||||| |||| |||||||  |||| ||||||||||||||||  ||||||||||  ||| | | ||||| |     
T  43844604 gtgacatagagttggatgacattggtgatattgatcaatcacaatgtcacaatgcttgtgtttctctctc--tcacaagcatcctgacattatgattaac 43844507  T
Q  143 caatgtcatcaatgtcacccaactctatatcatc 176  Q
    |||| |||||||| |||||||||||||| |||||    
T  43844506 caatatcatcaatatcacccaactctatgtcatc 43844473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 510 - 606
Target Start/End: Original strand, 6414102 - 6414198
Alignment:
Q  510 aaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaat 606  Q
    |||| ||||||||| |||||| | ||| |||| |||||||| ||| |||||||||||||||||| ||| |||| ||||||||| | |||||||||||    
T  6414102 aaatcgaacaacattttacataccaatctttgcatttatatattatttaaaaagtatggtcaaagtaagtcatgtgaatagtgcacattgcaaaaat 6414198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 68 - 176
Target Start/End: Original strand, 39850983 - 39851091
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactc 167  Q
    |||||||| ||||| ||||||   ||||  |||||||||||||||||||||||||||  | ||| |||||||| ||||||||| ||||||||| |||||     
T  39850983 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattataatattgtgattggtcaatgtcaccaatgtcactcaactt 39851082  T
Q  168 tatatcatc 176  Q
    ||| |||||    
T  39851083 tatgtcatc 39851091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 517 - 620
Target Start/End: Original strand, 4270236 - 4270339
Alignment:
Q  517 acaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgta 616  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||| |||||||||| ||| |||  ||||||||| | ||| |||||||  || |||||    
T  4270236 acaacatattacatgttaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatgta 4270335  T
Q  617 tttt 620  Q
    ||||    
T  4270336 tttt 4270339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 8796425 - 8796552
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| ||||| |||  ||| ||||  |||| |||||||  |||| ||||||||||||| |||||||||||||| |||| | | |||||| |    
T  8796425 gtgacatagagttaggtgatatttgtgatattggtcaatcacaatgtcacaatgcttgtgtttctctatctttcacaagcattgtgacattttgattggt 8796524  T
Q  143 caatgtcatcaatgtcacccaactctat 170  Q
    |||||||| |||| ||||| | ||||||    
T  8796525 caatgtcaccaatatcacctagctctat 8796552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 516 - 606
Target Start/End: Original strand, 22489416 - 22489507
Alignment:
Q  516 aacaacatcttacatg-ctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaat 606  Q
    ||||||||||| |||  ||||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||    
T  22489416 aacaacatcttgcattactaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaat 22489507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 6296633 - 6296739
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactc 167  Q
    |||||||||||||| |||||||   ||| ||||||||||||||||||||||||| || |||| | | | |||||  |||||||  ||||||| |||||||    
T  6296633 tgacattgaccaatcacaatgtcataatgcttgtgtttctctctctttcacaagtattgtgacattataattgactaatgtcactaatgtcatccaactc 6296732  T
Q  168 tatatca 174  Q
    |||||||    
T  6296733 tatatca 6296739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 510 - 616
Target Start/End: Complemental strand, 18090453 - 18090348
Alignment:
Q  510 aaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacg 609  Q
    |||| ||||||||||||| ||||||| |||| ||||||||| ||||||||||| |||| || |||||| |||||| ||||||| | |||| |||||| ||    
T  18090453 aaatcgaacaacatcttatatgctaacatttatatttatatattagttaaaaaatatgatc-aaataagtcatataaatagtgcacattgaaaaaattcg 18090355  T
Q  610 aaatgta 616  Q
    | |||||    
T  18090354 acatgta 18090348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 9632274 - 9632166
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||||||| ||| |||||||||||||||| ||||| ||||   ||||||||  || ||||||||  | |||| |||| | ||| ||||    
T  9632274 aacaacatcttacatgctaacattagtatttatatgttagtgaaaaaatatgactaaaataaactatgtgaatagtacacattgtaaaattgcgacatgt 9632175  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  9632174 attttgaaa 9632166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 516 - 572
Target Start/End: Complemental strand, 18035219 - 18035163
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaa 572  Q
    |||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||    
T  18035219 aacaacatcttacatgctaacatttgcatttatatattagttaaaaattatggtcaa 18035163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 494 - 562
Target Start/End: Original strand, 40716644 - 40716712
Alignment:
Q  494 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 562  Q
    ||||||||| ||| | ||||  |||||||||||||||||||| |||||||||||||| |||||||||||    
T  40716644 aaatatttattgagacaaatcaaacaacatcttacatgctaaaatttgtatttatatattagttaaaaa 40716712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 4958599 - 4958708
Alignment:
Q  39 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgat 138  Q
    |||||||||||||| |||| ||| ||||||||||||| ||||| |||||||   |||  |||||||||||||||||||||||| || ||||   ||||||    
T  4958599 ttgtgtgacatagaatttg-tgatattgatgacattggccaatcacaatgtcataatgtttgtgtttctctctctttcacaagtattgtga-cttgtgat 4958696  T
Q  139 tgatcaatgtca 150  Q
    || |||||||||    
T  4958697 tggtcaatgtca 4958708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 495 - 589
Target Start/End: Original strand, 8181935 - 8182030
Alignment:
Q  495 aatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatat-gttagttaaaaagtatggtcaaaataaatcatatgaata 589  Q
    |||||||| ||||| |||| ||||||||||||||||  ||||||||||||||||||  ||| ||||||| |||| ||| | ||||| |||||||||    
T  8181935 aatatttattgaaacaaattgaacaacatcttacattgtaatatttgtatttatataattaattaaaaaatatgatcatagtaaattatatgaata 8182030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 516 - 635
Target Start/End: Original strand, 40204865 - 40204984
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||| ||||| |||||| |||||||||||||| ||||| ||||| |||| ||||| ||| |   |||||||||| | |||  |||| ||||| ||||    
T  40204865 aacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacattttaaaattacgacatgt 40204964  T
Q  616 attttgaaatcgagggagta 635  Q
    |||| ||||| |||||||||    
T  40204965 atttagaaatagagggagta 40204984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 582
Target Start/End: Complemental strand, 24729974 - 24729908
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcat 582  Q
    ||||||||||||||||||||||||| || | |||| |||||| |||| |||| ||||||||||||||    
T  24729974 aacaacatcttacatgctaatatttatactcatatattagttcaaaattatgatcaaaataaatcat 24729908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 516 - 573
Target Start/End: Original strand, 33700216 - 33700273
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    ||||||||||||| | |||| |||||||||||||| ||||||||||| ||||||||||    
T  33700216 aacaacatcttacttactaacatttgtatttatatattagttaaaaaatatggtcaaa 33700273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 516 - 565
Target Start/End: Complemental strand, 38497191 - 38497142
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagta 565  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  38497191 aacaacatcttccatgctaatatttgtatttatacattagttaaaaagta 38497142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 620
Target Start/End: Original strand, 3370399 - 3370503
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||| |||||||||  ||| |||||||||||||| ||| ||||||| |||||||||| ||| |||| |||| |||  | ||||||||||  | ||||||    
T  3370399 aacaatatcttacatattaacatttgtatttatatattaattaaaaaatatggtcaaagtaagtcatgtgaacagtccacattgcaaaaaagcaaaatgt 3370498  T
Q  616 atttt 620  Q
    |||||    
T  3370499 atttt 3370503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 5033296 - 5033237
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  5033296 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 5033237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 533 - 604
Target Start/End: Complemental strand, 24524202 - 24524131
Alignment:
Q  533 taatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 604  Q
    |||||||||||||||||  |||||||||||||||||||||| ||| |||  | ||||||| | |||||||||    
T  24524202 taatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaa 24524131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 5667232 - 5667186
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgt 89  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||||    
T  5667232 gtgacatagagtttgatgacattggtgacattggccaattacaatgt 5667186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 34541889 - 34541831
Alignment:
Q  92 caatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    |||| |||||||||||||||||||||||||||| |||||| | ||||||  ||||||||    
T  34541889 caatgcttgtgtttctctctctttcacaagcattgtgatattatgattggccaatgtca 34541831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 10086891 - 10086846
Alignment:
Q  44 tgacatagagtttggtgacattgatgacattgaccaattacaatgt 89  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||    
T  10086891 tgacatagagttgggtgacattggtgacattgaccaatcacaatgt 10086846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 494 - 550
Target Start/End: Original strand, 32855583 - 32855639
Alignment:
Q  494 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatat 550  Q
    ||||||||| ||| | ||||  |||||||||||||||||||| ||||||||||||||    
T  32855583 aaatatttattgagacaaatcaaacaacatcttacatgctaacatttgtatttatat 32855639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 529 - 637
Target Start/End: Complemental strand, 36167182 - 36167074
Alignment:
Q  529 atgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtattttgaaatcga 628  Q
    |||||||||||||||||||||  ||||| |||||||||  ||||| ||| |||  ||||||||  | |||||||||||   | ||||||||| |||  ||    
T  36167182 atgctaatatttgtatttatacattagtgaaaaagtataatcaaagtaagtcaagtgaatagtacacattgcaaaaatgatacatgtattttaaaacgga 36167083  T
Q  629 gggagtata 637  Q
    |||||||||    
T  36167082 gggagtata 36167074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 2581828 - 2581895
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctc 110  Q
    |||||||||| || |||||||||| |||||||| ||||| ||||||   |||| ||||||||||||||    
T  2581828 gtgacatagaattgggtgacattgttgacattggccaatcacaatgccacaatgcttgtgtttctctc 2581895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 33841594 - 33841653
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    ||||||||||||| |||||||||| |||||||||||||| ||| |||  |||| ||||||    
T  33841594 gtgacatagagttgggtgacattggtgacattgaccaatcacattgtcacaatgcttgtg 33841653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 35031689 - 35031642
Alignment:
Q  103 tttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    |||||||||||||||||||||| | || | ||||||||||||||||||    
T  35031689 tttctctctctttcacaagcattgcgacattgtgattgatcaatgtca 35031642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 35440972 - 35441031
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    ||||| ||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  35440972 gtgacttagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 35441031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 5033223 - 5033169
Alignment:
Q  116 cacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    ||||||||| |||  | |||||||| ||||||||| |||||||||||||||||||    
T  5033223 cacaagcattgtggcattgtgattggtcaatgtcaccaatgtcacccaactctat 5033169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 43844545 - 43844599
Alignment:
Q  116 cacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    ||||||||| |||| | |||||||||||||| ||| |||||||| ||||||||||    
T  43844545 cacaagcattgtgacattgtgattgatcaatatcaccaatgtcatccaactctat 43844599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 584 - 640
Target Start/End: Original strand, 13217232 - 13217288
Alignment:
Q  584 tgaatagtgtatattgcaaaaatacgaaatgtattttgaaatcgagggagtatattt 640  Q
    ||||||||||| |||||||||||  || |||||||||||||  || |||||||||||    
T  13217232 tgaatagtgtacattgcaaaaattggacatgtattttgaaacggaaggagtatattt 13217288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 1e-36; HSPs: 95)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 23444411 - 23444277
Alignment:
Q  36 tatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgt 135  Q
    |||||| ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| | |||    
T  23444411 tatttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgt 23444312  T
Q  136 gattgatcaatgtcatcaatgtcacccaactctat 170  Q
    ||||| ||||||||| |||||||||||||||||||    
T  23444311 gattggtcaatgtcaccaatgtcacccaactctat 23444277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 516 - 642
Target Start/End: Original strand, 38416793 - 38416919
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  38416793 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 38416892  T
Q  616 attttgaaatcgagggagtatatttca 642  Q
    |||||||||  |||||||||| |||||    
T  38416893 attttgaaacggagggagtatttttca 38416919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 516 - 636
Target Start/End: Original strand, 35381037 - 35381157
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||| | |||| ||||||  || ||||    
T  35381037 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaattggacatgt 35381136  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||  ||||||||||    
T  35381137 attttgaaacggagggagtat 35381157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 516 - 635
Target Start/End: Complemental strand, 26170105 - 26169986
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||  ||||||||| | |||||||||||  || ||||    
T  26170105 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgcaaaaattggacatgt 26170006  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  26170005 attttgaaacggagggagta 26169986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 516 - 635
Target Start/End: Original strand, 55209717 - 55209836
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||  ||||||||| | |||| ||||||  || ||||    
T  55209717 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattggaaaaattggacatgt 55209816  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  55209817 attttgaaacggagggagta 55209836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 43 - 169
Target Start/End: Original strand, 51265448 - 51265574
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| | | |||||| |    
T  51265448 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattatgattggt 51265547  T
Q  143 caatgtcatcaatgtcacccaactcta 169  Q
    |||||||| ||||||||||||||||||    
T  51265548 caatgtcaccaatgtcacccaactcta 51265574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 495 - 624
Target Start/End: Original strand, 36523090 - 36523219
Alignment:
Q  495 aatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgta 594  Q
    ||||||||  ||||||||| ||||||||||||||||| ||| |||||||||||||| ||||||||||||||| |||||| ||| |||| | ||||||| |    
T  36523090 aatatttatcgaaataaatcgaacaacatcttacatgttaacatttgtatttatatattagttaaaaagtatagtcaaagtaagtcatgtaaatagtgca 36523189  T
Q  595 tattgcaaaaatacgaaatgtattttgaaa 624  Q
    |||||||||||| ||| || ||||||||||    
T  36523190 tattgcaaaaatgcgacatatattttgaaa 36523219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 12625370 - 12625262
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||| |||||||||| |||||||||||||   | ||||    
T  12625370 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcagatgaatagtgcatattgcaaaaattgaacatgt 12625271  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  12625270 attttgaaa 12625262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 44232220 - 44232328
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  44232220 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgt 44232319  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  44232320 attttgaaa 44232328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 516 - 637
Target Start/End: Complemental strand, 7614734 - 7614613
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||| |||| ||| || | ||||||| |||| ||||| ||||    
T  7614734 aacaacatcttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaaataagtcatgtgattaatatatattgtaaaattacgacatgt 7614635  T
Q  616 attttgaaatcgagggagtata 637  Q
    |||||||||  || ||||||||    
T  7614634 attttgaaacggatggagtata 7614613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 529 - 638
Target Start/End: Complemental strand, 25101826 - 25101717
Alignment:
Q  529 atgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtattttgaaatcga 628  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |  | ||||||||||| | | |||||||||||||| ||    
T  25101826 atgctaatatttgaatttatatgttagttaaaaagtatggtcaaaataaatcatataaataatacacattgcaaaaatgcaacatgtattttgaaataga 25101727  T
Q  629 gggagtatat 638  Q
    |||| |||||    
T  25101726 gggaatatat 25101717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 516 - 637
Target Start/End: Complemental strand, 38717005 - 38716885
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||| || ||||||| | |||||||||||  || ||||    
T  38717005 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtca-attaatagtgcacattgcaaaaattggacatgt 38716907  T
Q  616 attttgaaatcgagggagtata 637  Q
    |||||||||  |||||||||||    
T  38716906 attttgaaacagagggagtata 38716885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 57 - 170
Target Start/End: Original strand, 47661859 - 47661972
Alignment:
Q  57 ggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatg 156  Q
    |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| | |||||||| ||||||||| |||||    
T  47661859 ggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaatgtcaccaatg 47661958  T
Q  157 tcacccaactctat 170  Q
    ||||||||||||||    
T  47661959 tcacccaactctat 47661972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 12240321 - 12240429
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||| |||||||||| | |||| ||||||  || ||||    
T  12240321 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaattggacatgt 12240420  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  12240421 attttgaaa 12240429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 25296723 - 25296831
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  25296723 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagatatgt 25296822  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  25296823 attttgaaa 25296831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 516 - 635
Target Start/End: Complemental strand, 29830462 - 29830343
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||  ||||||  || ||||    
T  29830462 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattaaaaaaattggacatgt 29830363  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  29830362 attttgaaacggagggagta 29830343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 516 - 635
Target Start/End: Complemental strand, 31010333 - 31010214
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||| ||| |||||||||| | ||| |||||||  || ||||    
T  31010333 aacaatatcttacatgctaatatttttatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattacaaaaattggatatgt 31010234  T
Q  616 attttgaaatcgagggagta 635  Q
    ||||||||| ||||||||||    
T  31010233 attttgaaaccgagggagta 31010214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 35682169 - 35682296
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| ||||| |||| |||||||| ||||| |||||||   ||||||||||||||||| |||||||||||||| |||| | |||||| | |    
T  35682169 gtgacatagagttaggtgatattggtgacattggccaatcacaatgtcataatacttgtgtttctctatctttcacaagcattgtgacattgtgatcggt 35682268  T
Q  143 caatgtcatcaatgtcacccaactctat 170  Q
    |||||||| |||||||||| ||||||||    
T  35682269 caatgtcaccaatgtcacctaactctat 35682296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 516 - 635
Target Start/End: Original strand, 54330833 - 54330952
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||| | | |||||||||||  || ||||    
T  54330833 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagcgcacattgcaaaaattggacatgt 54330932  T
Q  616 attttgaaatcgagggagta 635  Q
    |||| ||||  |||||||||    
T  54330933 atttcgaaacggagggagta 54330952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 519 - 635
Target Start/End: Original strand, 2760873 - 2760989
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtatt 618  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||  ||||||||| | |||| ||||||  || |||||||    
T  2760873 aacatcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtatt 2760972  T
Q  619 ttgaaatcgagggagta 635  Q
    ||||||  |||||||||    
T  2760973 ttgaaacggagggagta 2760989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 492 - 636
Target Start/End: Complemental strand, 38721480 - 38721336
Alignment:
Q  492 gtaaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagt 591  Q
    ||||||| |||  |||| |||| ||||||||||||||||||||| |||||||||||||| || |||||||| |||| ||||||||| |||| |||||| |    
T  38721480 gtaaatagttatcgaaacaaattgaacaacatcttacatgctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaataat 38721381  T
Q  592 gtatattgcaaaaatacgaaatgtattttgaaatcgagggagtat 636  Q
      | |||| |||||| ||| ||||||||| |||| ||||||||||    
T  38721380 acacattgaaaaaatgcgacatgtattttaaaatggagggagtat 38721336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 43967842 - 43967734
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  | ||||||| | |||||||||||   | ||||    
T  43967842 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagttaatagtgcacattgcaaaaattgaacatgt 43967743  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  43967742 attttgaaa 43967734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 6271705 - 6271832
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| ||||| |||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| | ||||||||      
T  6271705 gtgacatagagttgggtgatattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggc 6271804  T
Q  143 caatgtcatcaatgtcacccaactctat 170  Q
    |||||||| |||| |||| |||||||||    
T  6271805 caatgtcaccaatatcactcaactctat 6271832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 516 - 635
Target Start/End: Complemental strand, 17610399 - 17610280
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||| |||||| |||||||||| ||| |||  ||||||||| |||||||||||||  || ||||    
T  17610399 aacaacatcttacatgctaatatttgtatttatacattagctaaaaaatatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattggacatgt 17610300  T
Q  616 attttgaaatcgagggagta 635  Q
    ||||| |||  |||||||||    
T  17610299 attttaaaacggagggagta 17610280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 516 - 635
Target Start/End: Complemental strand, 35686492 - 35686373
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||| ||| | |  ||||||||| | |||||||||||  || ||||    
T  35686492 aacaacatcttacatgataatatttgtatttatacattagttaaaaagtatggtcaaagtaagttaagtgaatagtgcacattgcaaaaattggacatgt 35686393  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  35686392 attttgaaactgagggagta 35686373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 516 - 639
Target Start/End: Original strand, 47386429 - 47386552
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||| |||  ||||||||| | ||| ||||||   || ||||    
T  47386429 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattccaaaaagtggacatgt 47386528  T
Q  616 attttgaaatcgagggagtatatt 639  Q
    |||||||||  |||||||||||||    
T  47386529 attttgaaacggagggagtatatt 47386552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 505 - 624
Target Start/End: Complemental strand, 27755853 - 27755730
Alignment:
Q  505 gaaataaatggaacaacatcttacatgctaatatttgtatttatat----gttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgc 600  Q
    |||| |||| |||||||||||||| |||||| ||||||||||||||    ||||||||||||||||||||||||||| | ||||||| | |||| ||| |    
T  27755853 gaaacaaattgaacaacatcttacgtgctaacatttgtatttatatatatgttagttaaaaagtatggtcaaaataagttatatgaacaatgtacattac 27755754  T
Q  601 aaaaatacgaaatgtattttgaaa 624  Q
    |||||| ||| |||||||||||||    
T  27755753 aaaaatgcgacatgtattttgaaa 27755730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 42375062 - 42375140
Alignment:
Q  92 caatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||||| |||||||||||||||||||    
T  42375062 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatgtcaccaatgtcacccaactctat 42375140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 39307815 - 39307707
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||| |||||| |||| |||||||||||||| ||||||||||||||   ||||| ||| |||| ||||||| ||||||||||||||| ||| ||||    
T  39307815 aacaacattttacatactaacatttgtatttatatattagttaaaaagtagcatcaaagtaagtcatgtgaatagggtatattgcaaaaatgcgacatgt 39307716  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  39307715 attttgaaa 39307707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 50205862 - 50205754
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||| | ||| ||||||   || ||||    
T  50205862 aacaacatcttacgagctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattacaaaaacttgacatgt 50205763  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  50205762 attttgaaa 50205754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 525 - 624
Target Start/End: Complemental strand, 3037090 - 3036991
Alignment:
Q  525 ttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtattttgaaa 624  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||| ||||||||  | |||| | || ||||| |||||||||||||    
T  3037090 ttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcatgtgaatagtacacattgtataattacgacatgtattttgaaa 3036991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 491 - 624
Target Start/End: Complemental strand, 5428720 - 5428589
Alignment:
Q  491 tgtaaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatag 590  Q
    |||||| |||||  |||| |||||||||||||||||||||| ||  |||| |||||||  ||||||||||||||||||||||  ||| |||| |||||||    
T  5428720 tgtaaacatttatcgaaacaaatggaacaacatcttacatgatagcatttatatttat--gttagttaaaaagtatggtcaacgtaagtcatgtgaatag 5428623  T
Q  591 tgtatattgcaaaaatacgaaatgtattttgaaa 624  Q
    || | ||||| ||||| ||| |||||||||||||    
T  5428622 tgcacattgccaaaatgcgacatgtattttgaaa 5428589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 516 - 635
Target Start/End: Original strand, 27407760 - 27407881
Alignment:
Q  516 aacaacatcttaca--tgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaat 613  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||||||||| ||||||| ||| | || ||||||||  | | ||||||||| ||  ||    
T  27407760 aacaacatcttacacatgctaatatttgtatttatatattagttaaaaagtagggtcaaagtaagttatgtgaatagttcacactgcaaaaatgcgtcat 27407859  T
Q  614 gtattttgaaatcgagggagta 635  Q
    |||||||||||| |||||||||    
T  27407860 gtattttgaaatggagggagta 27407881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 516 - 605
Target Start/End: Complemental strand, 45291951 - 45291862
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 605  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||| |||  ||||||||| | |||| |||||    
T  45291951 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattggaaaaa 45291862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 516 - 620
Target Start/End: Complemental strand, 25918322 - 25918218
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||| ||||||||  || ||||||||||| ||||||||||| |||  ||||||||| | |||||||||||  || ||||    
T  25918322 aacaacatcttacatgctaatatttatatttatacattggttaaaaagtagggtcaaaataattcaagtgaatagtgcacattgcaaaaattggacatgt 25918223  T
Q  616 atttt 620  Q
    |||||    
T  25918222 atttt 25918218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 522 - 624
Target Start/End: Original strand, 2571031 - 2571133
Alignment:
Q  522 atcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtattttg 621  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||| |||||| || | |||  ||||||  || ||||||||||    
T  2571031 atcttacatgctaacatttgtatttatatattagttaaaaaatatagtcaaaataaatcatgtgaataatgcacattataaaaatgtgacatgtattttg 2571130  T
Q  622 aaa 624  Q
    |||    
T  2571131 aaa 2571133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 516 - 606
Target Start/End: Complemental strand, 26125827 - 26125737
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaat 606  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||| |||  |||||| || |||||| ||||||    
T  26125827 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaataatgcatattgtaaaaat 26125737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 47762601 - 47762734
Alignment:
Q  33 tagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatac 132  Q
    ||||||||| ||||||||||| |  |||| |||  |||||||||||||| |||||||| ||||  || |||||||||||||||||||||||| |||| |     
T  47762601 tagtatttgggtgacatagagctgagtgatatttgtgacattgaccaatcacaatgttacaatgtttatgtttctctctctttcacaagcattgtgacat 47762700  T
Q  133 tgtgattgatcaatgtcatcaatgtcacccaact 166  Q
    | || |||| |||||||| |||| ||| ||||||    
T  47762701 tatggttgaccaatgtcaccaatatcatccaact 47762734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 516 - 632
Target Start/End: Original strand, 17446776 - 17446892
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||| |||||||||||||||||  |||||||||| ||||||||||| | | ||| |||||||||| | |||| ||||||  || || |    
T  17446776 aacaacatcttacatgttaatatttgtatttatacattagttaaaatgtatggtcaaagttagtcaaatgaatagtgcacattgtaaaaattggacatat 17446875  T
Q  616 attttgaaatcgaggga 632  Q
    ||||| |||| ||||||    
T  17446876 attttaaaatggaggga 17446892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 26186149 - 26186044
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| ||| ||||||||||||||| ||||| ||||| |  |||| |||||||||||  ||||||||||||||| |||| | |||||||||     
T  26186149 gtgacatagagttgggtaacattgatgacattggccaatcacaatttcacaatgcttgtgtttct--ctctttcacaagcattgtgacattgtgattgac 26186052  T
Q  143 caatgtca 150  Q
    ||||||||    
T  26186051 caatgtca 26186044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 25818453 - 25818387
Alignment:
Q  98 ttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaa 164  Q
    ||||||||||||||||||||||| ||| |||| | ||||||||| ||||||||||||||||||||||    
T  25818453 ttgtgtttctctctctttcacaatcattgtgacattgtgattgaccaatgtcatcaatgtcacccaa 25818387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 68 - 170
Target Start/End: Original strand, 53954638 - 53954740
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactc 167  Q
    |||||||| ||||| |||||||  |||| || ||||||||| ||||||||||||||| |||| | ||| ||||  |||||||| ||||||||||||||||    
T  53954638 tgacattggccaatcacaatgtcacaatgctagtgtttctcactctttcacaagcattgtgacattgtaattggacaatgtcaccaatgtcacccaactc 53954737  T
Q  168 tat 170  Q
    |||    
T  53954738 tat 53954740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 528 - 606
Target Start/End: Complemental strand, 55800941 - 55800863
Alignment:
Q  528 catgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaat 606  Q
    ||||||||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||    
T  55800941 catgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaat 55800863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 517 - 619
Target Start/End: Original strand, 56297846 - 56297948
Alignment:
Q  517 acaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgta 616  Q
    ||||||| ||| ||||||| |||||||||||||| |||||||| || ||||||||||| || | || |||||| |||| |||| |||||||||| |||||    
T  56297846 acaacattttatatgctaacatttgtatttatatattagttaataaatatggtcaaaacaagttatgtgaataatgtacattgtaaaaatacgacatgta 56297945  T
Q  617 ttt 619  Q
    |||    
T  56297946 ttt 56297948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 516 - 573
Target Start/End: Original strand, 4467662 - 4467719
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  4467662 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatagtcaaa 4467719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 494 - 606
Target Start/End: Complemental strand, 19595846 - 19595734
Alignment:
Q  494 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgt 593  Q
    ||||||||  ||||| ||||  ||||| || |||||||||||||||||||||||||  ||||||||| |||||||| ||| ||| |||  |||||||||     
T  19595846 aaatattttttgaaacaaatcaaacaaaatattacatgctaatatttgtatttatacattagttaaagagtatggttaaagtaagtcaagtgaatagtgc 19595747  T
Q  594 atattgcaaaaat 606  Q
    |||||| ||||||    
T  19595746 atattgtaaaaat 19595734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 20875390 - 20875498
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||| |||| || ||||  |||||||| ||||||||||| |||||||||| ||||| |||||||||||| | |||  |||| ||| | ||||    
T  20875390 aacaacatcttatatgcaaacatttacatttatatattagttaaaaaatatggtcaaagtaaattatatgaatagtgcacattttaaaattacaacatgt 20875489  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  20875490 attttgaaa 20875498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 30861909 - 30861822
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgat 130  Q
    ||||||||||||| | ||| |||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||||    
T  30861909 gtgacatagagttggatgatattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgat 30861822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 519 - 606
Target Start/End: Original strand, 50620828 - 50620915
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaat 606  Q
    ||||||||||||||||||||| |||||||||  |||||||||| ||||||||||| ||| | |  ||||||||| ||||||| |||||    
T  50620828 aacatcttacatgctaatattagtatttatacattagttaaaatgtatggtcaaagtaagttaagtgaatagtgcatattgctaaaat 50620915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 516 - 635
Target Start/End: Original strand, 19433501 - 19433624
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaag----tatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaa 611  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||    |||||||||| ||| |||  |||| |||| | |||||||||||   |     
T  19433501 aacaacatcttacatgctaatatttgtatttatacaatagttaaaaagtatatatggtcaaagtaagtcaagtgaaaagtgcacattgcaaaaattgaac 19433600  T
Q  612 atgtattttgaaatcgagggagta 635  Q
    |||||||||||||  |||||||||    
T  19433601 atgtattttgaaacagagggagta 19433624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 516 - 606
Target Start/End: Complemental strand, 55191943 - 55191853
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaat 606  Q
    |||||||| || |||||||||||||||||||| |  ||| ||||||||||| |||||| ||| ||| |||||||||| | |||||||||||    
T  55191943 aacaacattttgcatgctaatatttgtatttacacattaattaaaaagtatagtcaaagtaagtcaaatgaatagtgcacattgcaaaaat 55191853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 573
Target Start/End: Original strand, 9029592 - 9029649
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    ||||| ||||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  9029592 aacaatatcttacgtgctaatatttgtatttatacattagttaaaaagtatggtcaaa 9029649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 573
Target Start/End: Original strand, 14144600 - 14144657
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||| | ||||||||    
T  14144600 aacaacatcttacatactaatatttgtatttatatattagttaaaaaatgtggtcaaa 14144657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 2325115 - 2325068
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgtt 90  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  2325115 gtgacatagagtttggtgacattgatgacattgacaaatcacaatgtt 2325068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 519 - 625
Target Start/End: Complemental strand, 23360291 - 23360188
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtatt 618  Q
    |||||| ||| ||| || ||||||||| |||| ||||||||||| || ||||||| ||| ||||  |||||||| ||||||||||||| ||| |||||||    
T  23360291 aacatcatacttgccaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcat--gaatagtgcatattgcaaaaatgcgacatgtatt 23360195  T
Q  619 ttgaaat 625  Q
    |||||||    
T  23360194 ttgaaat 23360188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 47661989 - 47661918
Alignment:
Q  31 ggtagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    ||||| ||||| ||||||||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  47661989 ggtagcatttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 47661918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 494 - 588
Target Start/End: Original strand, 19903771 - 19903865
Alignment:
Q  494 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaat 588  Q
    |||||||||  |||| ||||  ||||| |||| ||||||||| |||||||||||||| ||||||||||  |||||||||| ||||| || |||||    
T  19903771 aaatatttatcgaaacaaatcaaacaatatctcacatgctaacatttgtatttatatattagttaaaatatatggtcaaagtaaattatgtgaat 19903865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 28694003 - 28693949
Alignment:
Q  98 ttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatc 152  Q
    ||||||||||||||||||||||| ||| |||||| |||||||| |||||||||||    
T  28694003 ttgtgtttctctctctttcacaaacattgtgatattgtgattggtcaatgtcatc 28693949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 44379934 - 44380060
Alignment:
Q  44 tgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatc 143  Q
    ||||||||||||  |||||||||  ||||||| ||||||| |||||  |||| |||| |||||||||| ||| | ||| || || | | |||||||| ||    
T  44379934 tgacatagagttgagtgacattggcgacattggccaattataatgtcacaatgcttgcgtttctctctattttataagtattgtaacattgtgattggtc 44380033  T
Q  144 aatgtcatcaatgtcacccaactctat 170  Q
    ||| ||| ||||||||| |||||||||    
T  44380034 aatatcaccaatgtcactcaactctat 44380060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 55090106 - 55090024
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    ||||||||  |||| |||||||  |||| ||||||| |||||||||||||||||||| |||| | ||||||||| ||||||||    
T  55090106 tgacattggtcaatcacaatgtcacaatgcttgtgtctctctctctttcacaagcattgtgacattgtgattgaccaatgtca 55090024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 510 - 575
Target Start/End: Original strand, 6013154 - 6013218
Alignment:
Q  510 aaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaat 575  Q
    |||| |||||| |||||||||||| |||||  ||||||||||||||||||||| ||||||||||||    
T  6013154 aaatcgaacaaaatcttacatgctcatatta-tatttatatgttagttaaaaaatatggtcaaaat 6013218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 524 - 604
Target Start/End: Complemental strand, 29051793 - 29051715
Alignment:
Q  524 cttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 604  Q
    |||||||||||||  |||||||||||| ||||||||||| |||||||||| ||| | || |||||| ||||||||| ||||    
T  29051793 cttacatgctaat--ttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaataatgtatattgtaaaa 29051715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 519 - 620
Target Start/End: Complemental strand, 34316636 - 34316536
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtatt 618  Q
    ||||||||| ||||||| |||||||||||||| |||||||| || |||| ||||| ||| |||||| ||||||| | | || |||||||||| || ||||    
T  34316636 aacatcttatatgctaacatttgtatttatatattagttaacaa-tatgatcaaagtaagtcatataaatagtgcacactgtaaaaatacgacatatatt 34316538  T
Q  619 tt 620  Q
    ||    
T  34316537 tt 34316536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 494 - 567
Target Start/End: Complemental strand, 50181201 - 50181128
Alignment:
Q  494 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatg 567  Q
    ||||||||| ||| | |||| |||||| ||||||||||||||||||||||||||||  ||| ||||||| ||||    
T  50181201 aaatatttattgagacaaatcgaacaatatcttacatgctaatatttgtatttatacattaattaaaaaatatg 50181128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 519 - 604
Target Start/End: Complemental strand, 10550542 - 10550455
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagtta--aaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 604  Q
    ||||||||||||||||| |||| ||||||||| |||||||  |||| |||||| ||| |||| ||| ||||||||| |||||| ||||    
T  10550542 aacatcttacatgctaacatttttatttatatattagttaaaaaaaatatggttaaagtaaaccatgtgaatagtgcatattgtaaaa 10550455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 140
Target Start/End: Original strand, 40789207 - 40789279
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattg 140  Q
    |||||||| ||||| |||||||  ||||  ||||||||||||||||||||||||||| |||| | ||||||||    
T  40789207 tgacattggccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattg 40789279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 53954746 - 53954686
Alignment:
Q  42 tgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    |||||||||||||| |||||||||| |||||||| |||||||||||||  |||| ||||||    
T  53954746 tgtgacatagagttgggtgacattggtgacattgtccaattacaatgtcacaatgcttgtg 53954686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 23444260 - 23444331
Alignment:
Q  31 ggtagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    ||||| ||||| || |||||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  23444260 ggtagcatttgggtaacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 23444331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 516 - 550
Target Start/End: Original strand, 34652159 - 34652193
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatat 550  Q
    |||||||||||||||||||||||||||||||||||    
T  34652159 aacaacatcttacatgctaatatttgtatttatat 34652193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 534 - 624
Target Start/End: Original strand, 34652208 - 34652298
Alignment:
Q  534 aatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtattttgaaa 624  Q
    ||||||||||||||||||||||||||||| ||||||| || ||| || | | ||||||  | ||| |||||||  || |||||||||||||    
T  34652208 aatatttgtatttatatgttagttaaaaaatatggtcgaagtaagtcgtgtaaatagtacacattacaaaaatgtgacatgtattttgaaa 34652298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 516 - 638
Target Start/End: Original strand, 37767101 - 37767223
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||| ||||||||| |||| |||||||||||||| |  |||||||||||| |||||| ||| |||  | ||||||| ||||| ||||| | ||| ||      
T  37767101 aacaatatcttacattctaacatttgtatttatatatacgttaaaaagtatagtcaaagtaagtcacgtaaatagtgcatatttcaaaattgcgacattc 37767200  T
Q  616 attttgaaatcgagggagtatat 638  Q
    ||||| |||  ||||||||||||    
T  37767201 attttaaaacggagggagtatat 37767223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 44380071 - 44380009
Alignment:
Q  37 atttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatactt 99  Q
    ||||| |||||||||||||  ||||||||| ||| |||||||||| |||||||| ||||||||    
T  44380071 atttgggtgacatagagttgagtgacattggtgatattgaccaatcacaatgttacaatactt 44380009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 47404671 - 47404613
Alignment:
Q  92 caatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    |||| |||| ||||||||||||||||||||||| |||| | ||||||||| ||||||||    
T  47404671 caatgcttgggtttctctctctttcacaagcattgtgacattgtgattgaccaatgtca 47404613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 50384191 - 50384133
Alignment:
Q  92 caatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    |||| |||||||||||||||||||||||||||| |||| | ||||||||  ||||||||    
T  50384191 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtca 50384133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 5048895 - 5048936
Alignment:
Q  135 tgattgatcaatgtcatcaatgtcacccaactctatatcatc 176  Q
    ||||||| |||||||||||||||||||||||||||| |||||    
T  5048895 tgattgaccaatgtcatcaatgtcacccaactctatgtcatc 5048936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 510 - 603
Target Start/End: Original strand, 5472088 - 5472181
Alignment:
Q  510 aaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaa 603  Q
    |||| |||||| ||| ||||| |||| |||||||||||||| ||  ||||||||| |||||||| ||||| || |||||| |  ||||||||||    
T  5472088 aaatcgaacaaaatcatacatactaacatttgtatttatatattgattaaaaagtgtggtcaaattaaattatgtgaataatacatattgcaaa 5472181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 518 - 642
Target Start/End: Complemental strand, 54610980 - 54610855
Alignment:
Q  518 caacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaat-agtgtatattgcaaaaatacgaaatgta 616  Q
    ||||||||||||| ||||||| ||||||||||  ||| ||||||| |||| | ||| ||| |||  ||||| |||||| |||||||||||   | || ||    
T  54610980 caacatcttacatactaatatctgtatttatacattaattaaaaaatatgattaaagtaagtcaagtgaataagtgtacattgcaaaaattaaacatata 54610881  T
Q  617 ttttgaaatcgagggagtatatttca 642  Q
    ||||||||  ||| ||||||||||||    
T  54610880 ttttgaaacggagagagtatatttca 54610855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 494 - 598
Target Start/End: Original strand, 29585966 - 29586069
Alignment:
Q  494 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgt 593  Q
    ||||||||| ||| ||||||  || ||||| ||||||| ||| ||||||||||| || ||| ||||||| ||| |||||| ||| | || ||||||||||    
T  29585966 aaatatttattgagataaatcaaaaaacattttacatgttaacatttgtatttacatattaattaaaaaatat-gtcaaagtaagttatgtgaatagtgt 29586064  T
Q  594 atatt 598  Q
    |||||    
T  29586065 atatt 29586069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 30446416 - 30446309
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||| ||||| ||||| |||||||||||||| ||||| ||||| || ||||||| ||| |||| |||||| || | ||| |||| || ||| |||     
T  30446416 aacaacattttacaggctaacatttgtatttatatattagtcaaaaa-tagggtcaaagtaagtcatgtgaataatgcagattacaaacatgcgacatgc 30446318  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  30446317 attttgaaa 30446309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 31430541 - 31430489
Alignment:
Q  98 ttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    |||||||||||||||||||| |||||| |||| | |||||||| |||||||||    
T  31430541 ttgtgtttctctctctttcataagcattgtgacattgtgattggtcaatgtca 31430489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 35682302 - 35682242
Alignment:
Q  42 tgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    |||||||||||||| |||||||||| ||||||||||| || |||||||  |||| ||||||    
T  35682302 tgtgacatagagttaggtgacattggtgacattgaccgatcacaatgtcacaatgcttgtg 35682242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 52028607 - 52028659
Alignment:
Q  98 ttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    ||||||||||||||||||||||||||| |||| | ||||||||  ||||||||    
T  52028607 ttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtca 52028659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 25617980 - 25618015
Alignment:
Q  39 ttgtgtgacatagagtttggtgacattgatgacatt 74  Q
    ||||||||||||||||| ||||||||||||||||||    
T  25617980 ttgtgtgacatagagttgggtgacattgatgacatt 25618015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 42375145 - 42375086
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    ||||||||||||| |||||||||| ||||||||| |||| |||||||  |||| ||||||    
T  42375145 gtgacatagagttgggtgacattggtgacattgatcaatcacaatgtcacaatgcttgtg 42375086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 567
Target Start/End: Original strand, 55091330 - 55091381
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatg 567  Q
    ||||||||||||||| |||| |||||||||||||| ||| ||||||| ||||    
T  55091330 aacaacatcttacatactaacatttgtatttatatattaattaaaaaatatg 55091381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 592
Target Start/End: Complemental strand, 56080108 - 56080025
Alignment:
Q  510 aaatggaacaacatcttacatgctaatattt-gtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 592  Q
    |||||||||||||||||| ||| ||| |||| |||| ||||| ||||||||||| ||| |||||| ||||| ||  ||||||||    
T  56080108 aaatggaacaacatcttatatgataacattttgtatgtatatattagttaaaaaatatagtcaaagtaaattatgcgaatagtg 56080025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 3862681 - 3862619
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgttt 105  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||    
T  3862681 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgttt 3862619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 3871438 - 3871376
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgttt 105  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||    
T  3871438 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgttt 3871376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 26186090 - 26186144
Alignment:
Q  116 cacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    ||||||||| |||| | ||||||||  ||||||||||||||| ||||||||||||    
T  26186090 cacaagcattgtgaaattgtgattggccaatgtcatcaatgttacccaactctat 26186144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 516 - 562
Target Start/End: Original strand, 27344091 - 27344137
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 562  Q
    |||||||||||| ||| |||||||| ||||||||| |||||||||||    
T  27344091 aacaacatcttatatgttaatatttttatttatatattagttaaaaa 27344137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 30710035 - 30709989
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgt 89  Q
    ||||||||||||| |||||||||| |||||||| ||||| |||||||    
T  30710035 gtgacatagagttaggtgacattggtgacattggccaatcacaatgt 30709989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 525 - 562
Target Start/End: Original strand, 51456506 - 51456543
Alignment:
Q  525 ttacatgctaatatttgtatttatatgttagttaaaaa 562  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  51456506 ttacatgctaaaatttgtatttatatattagttaaaaa 51456543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 54716349 - 54716386
Alignment:
Q  31 ggtagtatttgtgtgacatagagtttggtgacattgat 68  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  54716349 ggtagtatttgagtgacatagagttgggtgacattgat 54716386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 556 - 604
Target Start/End: Original strand, 8435720 - 8435768
Alignment:
Q  556 ttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 604  Q
    |||||||||||| ||||||||||| ||||||||| | || |||||||||    
T  8435720 ttaaaaagtatgatcaaaataaataatatgaataatatacattgcaaaa 8435768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 516 - 604
Target Start/End: Original strand, 32871502 - 32871590
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 604  Q
    ||||||||| ||||| || | ||||||||||| || ||||||||||| |||| |||||| || |||  ||||||| | ||||| |||||    
T  32871502 aacaacatcctacatacttacatttgtatttacatattagttaaaaaatatgatcaaaacaagtcaagtgaatagagcatattacaaaa 32871590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 2e-35; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 42890486 - 42890594
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| | |||||||||||  || ||||    
T  42890486 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaaatgaatagtgcacattgcaaaaattggacatgt 42890585  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  42890586 attttgaaa 42890594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 516 - 636
Target Start/End: Original strand, 28061658 - 28061778
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  28061658 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 28061757  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||  ||||||||||    
T  28061758 attttgaaacggagggagtat 28061778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 11016872 - 11016999
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||| ||| |||| | |||||||| |    
T  11016872 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaaacattgtgacattgtgattggt 11016971  T
Q  143 caatgtcatcaatgtcacccaactctat 170  Q
    |||||||| |||||||||||||||||||    
T  11016972 caatgtcaccaatgtcacccaactctat 11016999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 516 - 635
Target Start/End: Complemental strand, 36623427 - 36623308
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  36623427 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 36623328  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  36623327 attttgaaacggagggagta 36623308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 516 - 635
Target Start/End: Complemental strand, 47156146 - 47156027
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  47156146 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 47156047  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  47156046 attttgaaacggagggagta 47156027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 510 - 636
Target Start/End: Complemental strand, 41898113 - 41897987
Alignment:
Q  510 aaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacg 609  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||| |||  ||||||||| | |||||||||||  |    
T  41898113 aaatgaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaattgg 41898014  T
Q  610 aaatgtattttgaaatcgagggagtat 636  Q
    | |||||||||||||  ||||||||||    
T  41898013 acatgtattttgaaacggagggagtat 41897987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 7439022 - 7438914
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||  |||||| || |||||||||||||  || ||||    
T  7439022 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataagtcaagtgaataatgcatattgcaaaaattagacatgt 7438923  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  7438922 attttgaaa 7438914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 516 - 635
Target Start/End: Complemental strand, 48602555 - 48602436
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||| | |||| ||||||  |  ||||    
T  48602555 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattggaaaaattgggcatgt 48602456  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  48602455 attttgaaacggagggagta 48602436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 516 - 636
Target Start/End: Original strand, 38851990 - 38852110
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||| ||||||  || ||||    
T  38851990 aacaatatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattggaaaaattggacatgt 38852089  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||  ||||||||||    
T  38852090 attttgaaacggagggagtat 38852110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 505 - 624
Target Start/End: Complemental strand, 36341750 - 36341631
Alignment:
Q  505 gaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 604  Q
    |||| |||| |||||||||||||||| |||| |||| ||||||||||||||||||||||||| || ||| ||| |||| ||||||||| | |||||||||    
T  36341750 gaaacaaatcgaacaacatcttacattctaacatttatatttatatgttagttaaaaagtatcgttaaattaagtcatgtgaatagtgcacattgcaaaa 36341651  T
Q  605 atacgaaatgtattttgaaa 624  Q
    || ||| |||||||||||||    
T  36341650 atgcgacatgtattttgaaa 36341631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 36585228 - 36585120
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||||||||| ||||||| |||  ||||||||| | |||||||||||  || ||||    
T  36585228 aacaacatcttacatgctaatatttgtatttatacattagtttaaaagtatggtaaaaataagtcaagtgaatagtgcacattgcaaaaattggatatgt 36585129  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  36585128 attttgaaa 36585120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 40256176 - 40256068
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||| | | |||||||||||  || ||||    
T  40256176 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagagcacattgcaaaaattggacatgt 40256077  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  40256076 attttgaaa 40256068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 516 - 635
Target Start/End: Original strand, 40090061 - 40090180
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||| ||||||  || || |    
T  40090061 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgaaaaaattggacatat 40090160  T
Q  616 attttgaaatcgagggagta 635  Q
    ||||| |||  |||||||||    
T  40090161 attttaaaacggagggagta 40090180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 519 - 592
Target Start/End: Complemental strand, 26161712 - 26161639
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 592  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||    
T  26161712 aacattttacatgctaatatttgtatttatatattagttaaaaagcatggtcaaaataaatcatgtgaatagtg 26161639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 516 - 636
Target Start/End: Complemental strand, 16778624 - 16778504
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| |||  ||  ||||||||| | ||||||||| |  || ||||    
T  16778624 aacaacatcttacatgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagccaagtgaatagtgcacattgcaaaagttggacatgt 16778525  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||  ||||||||||    
T  16778524 attttgaaacggagggagtat 16778504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 516 - 635
Target Start/End: Complemental strand, 20885222 - 20885103
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||| |||  ||||||||  | |||| ||||||  || ||||    
T  20885222 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtccacattgtaaaaattggacatgt 20885123  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  20885122 attttgaaacggagggagta 20885103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 516 - 635
Target Start/End: Original strand, 32431501 - 32431620
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||| ||| |||  |||||| || | |||||||||||  || || |    
T  32431501 aacaacatcttacatactaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaatttgacatat 32431600  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  32431601 attttgaaacggagggagta 32431620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 38975808 - 38975935
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| |||||||||| | ||||||  |||| ||||||   |||| |||||||||||||||||||||||||||| |||  | | | ||||||    
T  38975808 gtgacatagagttgggtgacattggtaacattggtcaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtggcattataattgat 38975907  T
Q  143 caatgtcatcaatgtcacccaactctat 170  Q
    |||||||| |||||||||| ||||||||    
T  38975908 caatgtcaccaatgtcacctaactctat 38975935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 516 - 606
Target Start/End: Complemental strand, 44732131 - 44732041
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaat 606  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||| ||| |||  ||||||||| | |||||||||||    
T  44732131 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaat 44732041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 518 - 635
Target Start/End: Complemental strand, 41088704 - 41088587
Alignment:
Q  518 caacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtat 617  Q
    |||||||||||||| ||||||||| |||||||  ||||||||||| |||||||||| ||| ||| ||||| |||| |||||| |||| |  || ||||||    
T  41088704 caacatcttacatgttaatatttgcatttatacattagttaaaaaatatggtcaaagtaagtcagatgaacagtgcatattgtaaaatttggacatgtat 41088605  T
Q  618 tttgaaatcgagggagta 635  Q
    |||||||| |||||||||    
T  41088604 tttgaaatggagggagta 41088587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 516 - 573
Target Start/End: Original strand, 46103513 - 46103570
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  46103513 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaa 46103570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 516 - 636
Target Start/End: Original strand, 6766693 - 6766813
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||||||| ||||| |||||||  ||||||||||| |||||||||||||| | || |||||| || | |||| |||| | ||| ||||    
T  6766693 aacaacatcttacatgctaacatttgcatttatacattagttaaaaaatatggtcaaaataagttatgtgaataatgcagattgtaaaattgcgacatgt 6766792  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||  ||||||||||    
T  6766793 attttgaaacggagggagtat 6766813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 7457865 - 7457972
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| | |  ||||||||| | ||||||||| |  || ||||    
T  7457865 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagt-aagtgaatagtgcacattgcaaaacttagacatgt 7457963  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  7457964 attttgaaa 7457972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 27045551 - 27045659
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||| ||||||| |||||||||||||| ||||||||||| |||||||||| |||| ||| |||||||| || |||| |||| | | | ||||    
T  27045551 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaaaccatgtgaatagtatacattgtaaaattgcaacatgt 27045650  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  27045651 attttgaaa 27045659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 516 - 591
Target Start/End: Complemental strand, 2198721 - 2198646
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagt 591  Q
    ||||||||||||| || |||||||||||||||||  |||||||||||||||| ||||||||||||| |||||||||    
T  2198721 aacaacatcttacttgttaatatttgtatttatacattagttaaaaagtatgttcaaaataaatcagatgaatagt 2198646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 41018363 - 41018256
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||   |||| ||| |||||||||||||||||||||||| | || | ||||||||      
T  41018363 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttatgtttctctctctttcacaagcattgggacattgtgattggc 41018264  T
Q  143 caatgtca 150  Q
    ||||||||    
T  41018263 caatgtca 41018256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 516 - 606
Target Start/End: Complemental strand, 35117244 - 35117155
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaat 606  Q
    ||||||||||||||||||||||||| ||||||||  |||||| ||||||||||||||| ||| |||  ||||||||| |||||||||||||    
T  35117244 aacaacatcttacatgctaatatttatatttatacattagtt-aaaagtatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaat 35117155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 516 - 606
Target Start/End: Original strand, 39130069 - 39130159
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaat 606  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||  || |||  ||||||||| | |||||||||||    
T  39130069 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagaaagtcaagtgaatagtgcacattgcaaaaat 39130159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 46 - 159
Target Start/End: Original strand, 15027548 - 15027661
Alignment:
Q  46 acatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaa 145  Q
    ||||||||||   |||||||| |||||||||||||| |||||    ||||  ||||||||||||||||||||||||||| |||| | |||||||| ||||    
T  15027548 acatagagttgtttgacattggtgacattgaccaatcacaataccacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaa 15027647  T
Q  146 tgtcatcaatgtca 159  Q
    ||||| ||||||||    
T  15027648 tgtcaccaatgtca 15027661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 45231985 - 45231908
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaa 120  Q
    ||||||||||||| |||||||||| |||||||| ||||| |||||||| |||| ||| ||||||||||||||||||||    
T  45231985 gtgacatagagttgggtgacattggtgacattggccaatcacaatgttacaatgcttttgtttctctctctttcacaa 45231908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 4290548 - 4290671
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| ||||| |||| ||| ||||  |||| ||||||   |||| || |||||||||||||||||||||| || |||| | ||||||||      
T  4290548 gtgacatagagttgggtgatattggtgatattggtcaatcacaatgccacaatgctcgtgtttctctctctttcacaagaattgtgacattgtgattggc 4290647  T
Q  143 caatgtcatcaatgtcacccaact 166  Q
    |||||||| |||||||||||||||    
T  4290648 caatgtcaccaatgtcacccaact 4290671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 516 - 635
Target Start/End: Complemental strand, 42877505 - 42877386
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||| ||||||||| ||||||||  |||||||||||||||||||||| ||| | | || ||||||| | ||| ||||| |  || ||||    
T  42877505 aacaacatcttacattctaatatttttatttatacattagttaaaaagtatggtcaaagtaagttaaattaatagtgcacattacaaaatttggacatgt 42877406  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  42877405 attttgaaacggagggagta 42877386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 520 - 606
Target Start/End: Complemental strand, 30342189 - 30342103
Alignment:
Q  520 acatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaat 606  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||||| |||||| |||||||  |||||| || | |||||||||||    
T  30342189 acatcttacatactaatatttgtatttatacattagttaaaaagtatagtcaaagtaaatcaagtgaataatgcacattgcaaaaat 30342103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 68 - 170
Target Start/End: Original strand, 42628323 - 42628425
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactc 167  Q
    |||||||||||||| ||||||   |||| ||| |||||||||||||||||||||||| | || | ||||||||  |||| ||| ||||||||||||||||    
T  42628323 tgacattgaccaatcacaatgccacaatgcttatgtttctctctctttcacaagcattgggacattgtgattggccaatatcaccaatgtcacccaactc 42628422  T
Q  168 tat 170  Q
    |||    
T  42628423 tat 42628425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 519 - 624
Target Start/End: Complemental strand, 6174952 - 6174847
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtatt 618  Q
    |||||||||||||||||| ||||||||||||  ||||||||||| |||||||| | ||| ||| |||||||||| |  ||||||||||  || || ||||    
T  6174952 aacatcttacatgctaatgtttgtatttatacattagttaaaaaatatggtcacagtaagtcaaatgaatagtgcaccttgcaaaaattggacatatatt 6174853  T
Q  619 ttgaaa 624  Q
    ||||||    
T  6174852 ttgaaa 6174847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 519 - 624
Target Start/End: Complemental strand, 7169242 - 7169137
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtatt 618  Q
    ||||||||| ||| |||||||||||||||||| ||||||||||| ||| |||||| |||||||| ||||||    | ||||||||| || || |||||||    
T  7169242 aacatcttatatgttaatatttgtatttatatattagttaaaaaatatagtcaaagtaaatcatgtgaatatgacacattgcaaaattatgacatgtatt 7169143  T
Q  619 ttgaaa 624  Q
    ||||||    
T  7169142 ttgaaa 7169137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 532 - 624
Target Start/End: Complemental strand, 3785623 - 3785531
Alignment:
Q  532 ctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtattttgaaa 624  Q
    |||| |||||||||||||| ||||||||||| |||||||||| ||||  |||||||||||| ||||||  ||| || || |||||||||||||    
T  3785623 ctaacatttgtatttatatattagttaaaaaatatggtcaaagtaaactatatgaatagtgcatattgtgaaattatgatatgtattttgaaa 3785531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 4131646 - 4131754
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||| |||||| ||| ||| | || |||||||| || |||| |||| | ||| || |    
T  4131646 aacaacatcttacatgctaacttttgtatttatatattagttaaaaaatatggttaaagtaagttatgtgaatagtatacattgtaaaattgcgacatat 4131745  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  4131746 attttgaaa 4131754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 25566691 - 25566798
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||| ||||||||||||||||||| |||  ||||||| |||||||||||||| ||| |||  ||||||||| | |||| ||||||  || ||||    
T  25566691 aacaacatctcacatgctaatatttgtatt-atacattagttagaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgt 25566789  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  25566790 attttgaaa 25566798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 535 - 635
Target Start/End: Original strand, 46322127 - 46322227
Alignment:
Q  535 atatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtattttgaaatcgagggagt 634  Q
    ||||||||||| |||  |||||||||||||||||||||| ||| |||  |||||| || | |||||||||||  || |||||||||||||| ||||||||    
T  46322127 atatttgtattgatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttgaaatggagggagt 46322226  T
Q  635 a 635  Q
    |    
T  46322227 a 46322227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 46479948 - 46479840
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| | |||||||| ||| |||   |||||||| | |||| ||||||   | ||||    
T  46479948 aacaacatcttacatgctaatatttgtatttatacattagttaaaaattttggtcaaagtaagtcaagcgaatagtgcacattgtaaaaattaaacatgt 46479849  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  46479848 attttgaaa 46479840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 48000769 - 48000705
Alignment:
Q  103 tttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactc 167  Q
    |||||||||||||||||||||| |||  | |||||||||||||||||| ||||||||||||||||    
T  48000769 tttctctctctttcacaagcattgtggcattgtgattgatcaatgtcaccaatgtcacccaactc 48000705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 530 - 620
Target Start/End: Complemental strand, 8683923 - 8683833
Alignment:
Q  530 tgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtatttt 620  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||| |||  |||||| || | ||| |||||||  || |||||||||    
T  8683923 tgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacatttcaaaaattggacatgtatttt 8683833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 520 - 573
Target Start/End: Original strand, 11502727 - 11502780
Alignment:
Q  520 acatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||| |||||    
T  11502727 acatcttacatgctaatatttgtatttatacattagttaaaaagtatgatcaaa 11502780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 48000795 - 48000867
Alignment:
Q  98 ttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    ||||||||||||||||||||||  ||| |||  | |||||||| ||||||||| |||||||||||||||||||    
T  48000795 ttgtgtttctctctctttcacagacattgtggcattgtgattggtcaatgtcaccaatgtcacccaactctat 48000867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 516 - 604
Target Start/End: Original strand, 49101956 - 49102044
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 604  Q
    ||||||||||||||||| || |||||||||||| | ||||||||||| ||||   ||||||| | |||||||||||| |||||| ||||    
T  49101956 aacaacatcttacatgcaaaaatttgtatttatgtattagttaaaaaatatgacaaaaataagttatatgaatagtgcatattgtaaaa 49102044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 30217594 - 30217508
Alignment:
Q  37 atttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 124  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||| ||||| |   |||  || ||||||||||||||||||||||||    
T  30217594 atttgtgtgacatagagtttg-tgacattgatgacattcgccaatcacaatatcaaaatgtttatgtttctctctctttcacaagcat 30217508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 34854830 - 34854723
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| |||||||||| ||||||||  |||| ||||||   ||||  |||||||||| |||||||||||||||| |||  | ||||||||      
T  34854830 gtgacatagagttgggtgacattggtgacattggtcaatcacaatgccacaatgtttgtgtttctatctctttcacaagcattgtggcattgtgattggc 34854731  T
Q  143 caatgtca 150  Q
    ||||||||    
T  34854730 caatgtca 34854723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 519 - 624
Target Start/End: Complemental strand, 5529127 - 5529022
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtatt 618  Q
    ||||||||||||||||| |||| ||||| ||| ||||||||||| ||| ||||||||||   |  | ||||||||| |||| |||| || || |||||||    
T  5529127 aacatcttacatgctaacatttttatttgtatattagttaaaaaatatagtcaaaataatctacgtaaatagtgtacattgtaaaattaggacatgtatt 5529028  T
Q  619 ttgaaa 624  Q
    ||||||    
T  5529027 ttgaaa 5529022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 592
Target Start/End: Original strand, 5788520 - 5788596
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 592  Q
    ||||||||||||||| ||||||||||||||||||  ||||| |||||||||| | ||| ||| |||  |||||||||    
T  5788520 aacaacatcttacatactaatatttgtatttatacattagtaaaaaagtatgattaaagtaagtcaattgaatagtg 5788596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 516 - 591
Target Start/End: Original strand, 41134631 - 41134701
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagt 591  Q
    ||||||||||||||||||||||||||||||||||  |||||||     |||||||||| ||| ||| |||||||||    
T  41134631 aacaacatcttacatgctaatatttgtatttatacattagtta-----tatggtcaaagtaagtcaaatgaatagt 41134701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 516 - 591
Target Start/End: Original strand, 49110613 - 49110688
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagt 591  Q
    ||||| || ||||||  ||| ||||||||| |||| ||||||||||| |||||||||| |||||||| ||||||||    
T  49110613 aacaatattttacatcataacatttgtattaatatattagttaaaaaatatggtcaaagtaaatcatttgaatagt 49110688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 11017004 - 11016958
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgt 89  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||    
T  11017004 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgt 11016958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 516 - 562
Target Start/End: Complemental strand, 21379863 - 21379817
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 562  Q
    ||||||||||||||||||||||||||||||||||  |||| ||||||    
T  21379863 aacaacatcttacatgctaatatttgtatttatacattagctaaaaa 21379817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 22764820 - 22764754
Alignment:
Q  58 gtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 124  Q
    ||||||||| ||| |||| ||||| |||||||  ||||  |||||||||||||||||||||||||||    
T  22764820 gtgacattggtgatattggccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcat 22764754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 515 - 573
Target Start/End: Original strand, 38767201 - 38767259
Alignment:
Q  515 gaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    ||||||||||||| || || | |||||||||||||| ||||||||||| ||||||||||    
T  38767201 gaacaacatcttatatactgacatttgtatttatatattagttaaaaaatatggtcaaa 38767259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 555 - 635
Target Start/End: Complemental strand, 45331992 - 45331915
Alignment:
Q  555 gttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtattttgaaatcgagggagta 635  Q
    |||||||| |||||||||| ||| ||||||||||| || |||||||||||||||   |||| ||||||||  |||||||||    
T  45331992 gttaaaaaatatggtcaaagtaagtcatatgaataatgcatattgcaaaaatac---atgtgttttgaaacggagggagta 45331915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 573
Target Start/End: Complemental strand, 3851193 - 3851136
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    ||||| ||||||| || |||||||||||||||||  ||||||||||||||| ||||||    
T  3851193 aacaatatcttacgtgttaatatttgtatttatacattagttaaaaagtattgtcaaa 3851136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 4649348 - 4649432
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctc--tctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    ||||||||  |||| |||||| | |||| ||||||||||||  |||||||||||||||| |||| | ||||||||| ||||||||    
T  4649348 tgacattggtcaatcacaatgctacaatgcttgtgtttctctctctctttcacaagcatcgtgacattgtgattgaccaatgtca 4649432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 10419486 - 10419539
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaag 121  Q
    ||||||||  |||| | |||||| ||||||||||||||||||||||||||||||    
T  10419486 tgacattggtcaatcataatgttacaatacttgtgtttctctctctttcacaag 10419539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 27028928 - 27028831
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattg 140  Q
    |||||||||| || |||||  ||| ||||||||  |||| |||||||  ||||  |||||||||||||||||||| |||||| |||| | ||||||||    
T  27028928 gtgacatagacttgggtgatgttggtgacattggtcaatcacaatgtcacaatgtttgtgtttctctctctttcagaagcattgtgacattgtgattg 27028831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 35570193 - 35570238
Alignment:
Q  517 acaacatcttacatgctaatatttgtatttatatgttagttaaaaa 562  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||    
T  35570193 acaacatcttacatgctaaaatttgtatttgtatattagttaaaaa 35570238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 519 - 587
Target Start/End: Complemental strand, 34750618 - 34750550
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaa 587  Q
    ||||||||||||| ||| |||| ||||| ||| |||||||||||||| ||||||| ||| |||| ||||    
T  34750618 aacatcttacatgttaacatttttatttgtatattagttaaaaagtagggtcaaagtaagtcatgtgaa 34750550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 537 - 573
Target Start/End: Complemental strand, 42662284 - 42662248
Alignment:
Q  537 atttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    |||||||||||||| ||||||||||||||||||||||    
T  42662284 atttgtatttatatattagttaaaaagtatggtcaaa 42662248  T

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Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 562
Target Start/End: Original strand, 47525973 - 47526025
Alignment:
Q  510 aaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 562  Q
    |||| |||||| |||||| ||||||| |||||||||||||| |||||||||||    
T  47525973 aaatcgaacaagatcttaaatgctaacatttgtatttatatattagttaaaaa 47526025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 522 - 569
Target Start/End: Original strand, 37467456 - 37467503
Alignment:
Q  522 atcttacatgctaatatttgtatttatatgttagttaaaaagtatggt 569  Q
    |||||| ||||||| |||||||||||||| ||||||||||| ||||||    
T  37467456 atcttaaatgctaacatttgtatttatatattagttaaaaaatatggt 37467503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 42628430 - 42628371
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    ||||||||||||| |||||||||| ||| |||| ||||| ||||||| ||||| ||||||    
T  42628430 gtgacatagagttgggtgacattggtgatattggccaatcacaatgtcccaatgcttgtg 42628371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 504 - 562
Target Start/End: Original strand, 4048865 - 4048923
Alignment:
Q  504 tgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 562  Q
    ||||||||||  ||||||| |||||| ||||  |||||||||||||| |||||||||||    
T  4048865 tgaaataaatcaaacaacaacttacaagctagcatttgtatttatatattagttaaaaa 4048923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 6225600 - 6225542
Alignment:
Q  103 tttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacc 161  Q
    ||||||||||||||| ||| |  |||| | |||||||||| ||||||||||||||||||    
T  6225600 tttctctctctttcataaggaccgtgacattgtgattgattaatgtcatcaatgtcacc 6225542  T

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Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 48000869 - 48000827
Alignment:
Q  46 acatagagtttggtgacattgatgacattgaccaattacaatg 88  Q
    |||||||||| |||||||||| |||||||||||||| ||||||    
T  48000869 acatagagttgggtgacattggtgacattgaccaatcacaatg 48000827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 34854788 - 34854825
Alignment:
Q  133 tgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  34854788 tgtgattgaccaatgtcaccaatgtcacccaactctat 34854825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 38975940 - 38975895
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 88  Q
    ||||||||||||| |||||||||| ||||||||| |||||| ||||    
T  38975940 gtgacatagagttaggtgacattggtgacattgatcaattataatg 38975895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 41018321 - 41018358
Alignment:
Q  133 tgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  41018321 tgtgattggtcaatgtcaccaatgtcacccaactctat 41018358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 494 - 550
Target Start/End: Original strand, 7380903 - 7380959
Alignment:
Q  494 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatat 550  Q
    ||||||||| ||||||||||  |||||||||||||||| ||  |||||| |||||||    
T  7380903 aaatatttattgaaataaatccaacaacatcttacatgttatcatttgtctttatat 7380959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 7672021 - 7671965
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 124  Q
    |||||||| ||||| ||||||   ||||  |||||||||||||||||||||||||||    
T  7672021 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcat 7671965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 522 - 562
Target Start/End: Original strand, 19120679 - 19120719
Alignment:
Q  522 atcttacatgctaatatttgtatttatatgttagttaaaaa 562  Q
    ||||||||||||||||||| ||||||||| ||| |||||||    
T  19120679 atcttacatgctaatatttatatttatatattaattaaaaa 19120719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 522 - 562
Target Start/End: Original strand, 23707572 - 23707612
Alignment:
Q  522 atcttacatgctaatatttgtatttatatgttagttaaaaa 562  Q
    |||| |||||||||||||||||||||||  |||||||||||    
T  23707572 atctcacatgctaatatttgtatttatacattagttaaaaa 23707612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 29053424 - 29053368
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 124  Q
    |||||||| ||||| ||||||   ||||  |||||||||||||||||||||||||||    
T  29053424 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcat 29053368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 1e-33; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 510 - 635
Target Start/End: Complemental strand, 16865179 - 16865054
Alignment:
Q  510 aaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacg 609  Q
    |||| |||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||| ||| ||||||||||| ||||||||| |||||| ||    
T  16865179 aaatcgaacaacaacttacatgctaacatttgtatttatatgttagttaaaaagtatcgtcaaagtaagtcatatgaatattgtatattgtaaaaatgcg 16865080  T
Q  610 aaatgtattttgaaatcgagggagta 635  Q
    | ||||||||| |||| ||| |||||    
T  16865079 acatgtattttaaaatagagtgagta 16865054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 516 - 636
Target Start/End: Original strand, 19141209 - 19141329
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  19141209 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 19141308  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||  ||||||||||    
T  19141309 attttgaaacggagggagtat 19141329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 516 - 635
Target Start/End: Original strand, 8042165 - 8042284
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  8042165 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 8042264  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  8042265 attttgaaacggagggagta 8042284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 516 - 633
Target Start/End: Complemental strand, 5405115 - 5404998
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  5405115 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 5405016  T
Q  616 attttgaaatcgagggag 633  Q
    |||||||||  |||||||    
T  5405015 attttgaaacggagggag 5404998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 7608168 - 7608060
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  7608168 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 7608069  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  7608068 attttgaaa 7608060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 7799966 - 7799858
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||| ||| |||| ||||||||| | ||||||||||| ||| ||||    
T  7799966 aacaacatcttacatgctaacatttgtatttatatattagttaaaaagtagggtcaaagtaagtcatgtgaatagtgcacattgcaaaaatgcgacatgt 7799867  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  7799866 attttgaaa 7799858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 44365276 - 44365168
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| |||||||||||||  || ||||    
T  44365276 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattggacatgt 44365177  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  44365176 attttgaaa 44365168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 516 - 621
Target Start/End: Original strand, 11841736 - 11841841
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||| |||||||||| | |||||||||||  || ||||    
T  11841736 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattggacatgt 11841835  T
Q  616 attttg 621  Q
    ||||||    
T  11841836 attttg 11841841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 519 - 636
Target Start/End: Complemental strand, 39358262 - 39358145
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtatt 618  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || |||||||    
T  39358262 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 39358163  T
Q  619 ttgaaatcgagggagtat 636  Q
    ||||||  ||||||||||    
T  39358162 ttgaaacggagggagtat 39358145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 16514427 - 16514554
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| |||||||||| |||||||| ||||| || |||    ||| |||||||||||||||||||||||||||| |||| | |||||||| |    
T  16514427 gtgacatagagttgggtgacattggtgacattggccaatcactatgccataatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 16514526  T
Q  143 caatgtcatcaatgtcacccaactctat 170  Q
    |||||||| |||| ||||||||||||||    
T  16514527 caatgtcaccaatctcacccaactctat 16514554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 519 - 636
Target Start/End: Original strand, 2183103 - 2183220
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtatt 618  Q
    ||||||||||||||||||||||||||| |||  |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || |||||||    
T  2183103 aacatcttacatgctaatatttgtattcatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 2183202  T
Q  619 ttgaaatcgagggagtat 636  Q
    ||||||  ||||||||||    
T  2183203 ttgaaacggagggagtat 2183220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 29508826 - 29508698
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgata-ctgtgattga 141  Q
    ||||||||||||| ||||| |||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||  |  ||||||||     
T  29508826 gtgacatagagttgggtgatattggtgacattggccaatcacaatgccgcaatgcttgtgtttctctctctttcacaagcattgtggcatttgtgattgg 29508727  T
Q  142 tcaatgtcatcaatgtcacccaactctat 170  Q
    ||||||||| |||||||||||||||||||    
T  29508726 tcaatgtcaccaatgtcacccaactctat 29508698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 510 - 625
Target Start/End: Original strand, 24093673 - 24093789
Alignment:
Q  510 aaatggaacaacatcttacatgctaatatttgtatttatatgttagtt-aaaaagtatggtcaaaataaatcatatgaatagtgtatattgc-aaaaata 607  Q
    |||| ||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||| |||||| | | || || |||||||    
T  24093673 aaatcgaacaacatcttacatgctaacatttgta-ttatatgttagttaaaaaagtatggtcaaagtaaatcatacgaatagcgcacatcgcaaaaaata 24093771  T
Q  608 cgaaatgtattttgaaat 625  Q
    ||| ||||||||||||||    
T  24093772 cgacatgtattttgaaat 24093789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 6223185 - 6223077
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||  ||||||||| | |||||||||||   | ||||    
T  6223185 aacatcatcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgt 6223086  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  6223085 attttgaaa 6223077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 11931810 - 11931702
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||| ||||||| |||||||||||||| ||||||||||| |||||||||| ||| | ||||||||| || |||||| |||| | ||| ||||    
T  11931810 aacaacatcttaaatgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagttatatgaataatgcatattgtaaaattgcgacatgt 11931711  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  11931710 attttgaaa 11931702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 519 - 625
Target Start/End: Complemental strand, 36072290 - 36072184
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtatt 618  Q
    |||||||||||||||||||||| ||||||||  ||||||||||| |||| ||||| ||| ||| |||||||||| |||||| ||||||  || |||||||    
T  36072290 aacatcttacatgctaatatttatatttatacattagttaaaaaatatgatcaaagtaagtcaaatgaatagtgcatattgtaaaaattggacatgtatt 36072191  T
Q  619 ttgaaat 625  Q
    |||||||    
T  36072190 ttgaaat 36072184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 519 - 636
Target Start/End: Complemental strand, 42133868 - 42133751
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtatt 618  Q
    |||||||| |||||||| |||||||||||||| ||||||||||| |||| ||||| ||||  |||||||||||| | |||  |||| ||||| |||||||    
T  42133868 aacatctttcatgctaacatttgtatttatatattagttaaaaaatatgatcaaagtaaactatatgaatagtgcacattttaaaattacgacatgtatt 42133769  T
Q  619 ttgaaatcgagggagtat 636  Q
    |||||||  |||||||||    
T  42133768 ttgaaatgaagggagtat 42133751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 78 - 170
Target Start/End: Complemental strand, 14229453 - 14229361
Alignment:
Q  78 caattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    |||| |||||||  |||| |||||||||||||||||||||||||||| |||| | ||||||||| |||||||| |||||||||| ||||||||    
T  14229453 caatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgaccaatgtcaccaatgtcaccgaactctat 14229361  T

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Target: chr2; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 522 - 624
Target Start/End: Complemental strand, 19262793 - 19262691
Alignment:
Q  522 atcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtattttg 621  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| | | || ||||||| | |||| ||||||  || ||||||||||    
T  19262793 atcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagttaaataaatagtgcacattgaaaaaattggacatgtattttg 19262694  T
Q  622 aaa 624  Q
    |||    
T  19262693 aaa 19262691  T

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Target: chr2; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 68 - 170
Target Start/End: Original strand, 38933615 - 38933717
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactc 167  Q
    |||||||||||||| ||||||   |||| |||||||||||||||||||||||||||| |||| | | ||||||  ||| |||| ||||||||||||||||    
T  38933615 tgacattgaccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattatgattggccaacgtcaccaatgtcacccaactc 38933714  T
Q  168 tat 170  Q
    |||    
T  38933715 tat 38933717  T

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Target: chr2; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 24252078 - 24251971
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||||| | || |||||| |  |||||| |||| |  |||||||    
T  24252078 aacaacat-ttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaaataagttatgtgaataatacatattgtaaaattgtgaaatgt 24251980  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  24251979 attttgaaa 24251971  T

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Target: chr2; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 6721970 - 6722081
Alignment:
Q  59 tgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtc 158  Q
    |||||||| |||||||||||||| ||||| |  |||| |||||||||||||||||||||||| ||| |||| | ||||||||  |||| |||  ||||||    
T  6721970 tgacattggtgacattgaccaatcacaatatcacaatgcttgtgtttctctctctttcacaaacattgtgacattgtgattggccaatatcactaatgtc 6722069  T
Q  159 acccaactctat 170  Q
    | ||||||||||    
T  6722070 aaccaactctat 6722081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 522 - 625
Target Start/End: Original strand, 43444689 - 43444792
Alignment:
Q  522 atcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtattttg 621  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||||||||||  |||| || |||||| || | |||| |||| | ||| ||||||||||    
T  43444689 atcttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaagaaaattatgtgaataatgcacattgtaaaattgcgacatgtattttg 43444788  T
Q  622 aaat 625  Q
    ||||    
T  43444789 aaat 43444792  T

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Target: chr2; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 6217334 - 6217232
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactc 167  Q
    |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||  | ||||||||  |||||||| ||||||||||||||||    
T  6217334 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactc 6217235  T
Q  168 tat 170  Q
    |||    
T  6217234 tat 6217232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 77 - 170
Target Start/End: Complemental strand, 14470693 - 14470600
Alignment:
Q  77 ccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    ||||| |||||||  ||||  ||||||||||||||||||||||||||| |  | | |||||||| ||||||||| |||||||||||||||||||    
T  14470693 ccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgcaacattgtgattggtcaatgtcaccaatgtcacccaactctat 14470600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 2893991 - 2894075
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatc 152  Q
    |||||||| ||||| ||||| |  |||| ||||| |||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  2893991 tgacattggccaatcacaatctcacaatgcttgtatttctctctctttcacaagcattgtgacactgtgattgaccaatgtcatc 2894075  T

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Target: chr2; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 8534164 - 8534259
Alignment:
Q  58 gtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatca 153  Q
    ||||||||||||||||||| ||||||||||||   |||| |||||||||||||| ||||||||| || |||| | ||| ||||| |||| ||||||    
T  8534164 gtgacattgatgacattgatcaattacaatgtaaaaatatttgtgtttctctctatttcacaagaattgtgacattgtaattgaccaatatcatca 8534259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 14470591 - 14470654
Alignment:
Q  39 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    ||||||||||||||||| |||||||||| |||||||||||||| |||||||| |||| ||||||    
T  14470591 ttgtgtgacatagagttgggtgacattggtgacattgaccaatcacaatgttgcaatgcttgtg 14470654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 170
Target Start/End: Original strand, 24115919 - 24116050
Alignment:
Q  39 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgat 138  Q
    |||||||| ||||||||  || |||||| | |||||| ||||| |||||||| |||| | |||||||| | ||||||||||||||| | || | ||||||    
T  24115919 ttgtgtgagatagagttgagtcacattggtaacattggccaatcacaatgttacaatgcctgtgtttcacactctttcacaagcattgcgacattgtgat 24116018  T
Q  139 tgatcaatgtcatcaatgtcacccaactctat 170  Q
    ||| |||| |||  |||| |||||||||||||    
T  24116019 tgaccaatatcactaatggcacccaactctat 24116050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 573
Target Start/End: Complemental strand, 44644989 - 44644932
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    |||||||||||| ||| |||||||| ||||||||| ||||||||||||||||||||||    
T  44644989 aacaacatcttatatgttaatatttatatttatatattagttaaaaagtatggtcaaa 44644932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 519 - 610
Target Start/End: Original strand, 36177723 - 36177815
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagtt-aaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacga 610  Q
    ||||||||| ||| |||||||| ||||||||| |||||| ||||| ||||||||||||||||||| |||||| ||   ||||||||| |||||    
T  36177723 aacatcttagatgttaatatttttatttatatattagttaaaaaaatatggtcaaaataaatcatgtgaataatgcgcattgcaaaattacga 36177815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 33607491 - 33607387
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||    |||||||||||||||  |||||||||||||||  ||||| ||| ||| |||||||||| | |||| ||||||  || ||||    
T  33607491 aacaacatcttacat----atatttgtatttatacattagttaaaaagtataatcaaagtaagtcaaatgaatagtgcacattgtaaaaattggacatgt 33607396  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  33607395 attttgaaa 33607387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 517 - 572
Target Start/End: Complemental strand, 38839191 - 38839136
Alignment:
Q  517 acaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaa 572  Q
    ||||||||||| ||||||| |||||||||||||| ||||||||||| |||||||||    
T  38839191 acaacatcttatatgctaacatttgtatttatatattagttaaaaaatatggtcaa 38839136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 45213939 - 45213892
Alignment:
Q  39 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaa 86  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  45213939 ttgtgtgacatagagttgggtgacattgatgacattgaccaatcacaa 45213892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 516 - 573
Target Start/End: Original strand, 9172289 - 9172346
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    ||||||||||||||||||||  ||||||||||||  ||||||||||| ||||||||||    
T  9172289 aacaacatcttacatgctaacttttgtatttatacattagttaaaaaatatggtcaaa 9172346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 15011297 - 15011390
Alignment:
Q  57 ggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    |||||||||| ||| |||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||| | ||||||||  ||||||||    
T  15011297 ggtgacattggtgatattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtca 15011390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 516 - 637
Target Start/End: Original strand, 22839070 - 22839191
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||| ||||||| ||||  ||||||||  |||||||||| |||||||||| ||| | || ||||||||| | ||||||||  |   |||| |    
T  22839070 aacaacatcttatatgctaacattttaatttatatactagttaaaaaatatggtcaaagtaagttatgtgaatagtgcacattgcaaatttgtaaaatat 22839169  T
Q  616 attttgaaatcgagggagtata 637  Q
    |||||||||| || ||||||||    
T  22839170 attttgaaatggaaggagtata 22839191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 516 - 573
Target Start/End: Complemental strand, 32774710 - 32774653
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    |||||||||||||||  |||||||| ||| ||||| ||||||||||||||||||||||    
T  32774710 aacaacatcttacatattaatatttatatgtatatattagttaaaaagtatggtcaaa 32774653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 516 - 573
Target Start/End: Complemental strand, 38292071 - 38292014
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    |||||||||||||||| ||| ||||||||||||||  |||||||||| ||||||||||    
T  38292071 aacaacatcttacatgttaacatttgtatttatatactagttaaaaaatatggtcaaa 38292014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 528 - 636
Target Start/End: Original strand, 9006939 - 9007047
Alignment:
Q  528 catgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtattttgaaatcg 627  Q
    |||||||| |||||||||||||  ||||||||||| |||||||||| |||   | ||||||| || | |||| |||| | ||| |||||||||||||| |    
T  9006939 catgctaacatttgtatttataaattagttaaaaaatatggtcaaagtaagctacatgaataatgcacattgtaaaattgcgacatgtattttgaaatgg 9007038  T
Q  628 agggagtat 636  Q
    | |||||||    
T  9007039 atggagtat 9007047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 14892318 - 14892390
Alignment:
Q  98 ttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    |||| ||||||||||||||| ||| || || | | |||||||||||||||||| |||||||| ||||||||||    
T  14892318 ttgtctttctctctctttcataagtattgtaacattgtgattgatcaatgtcaccaatgtcatccaactctat 14892390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 14892407 - 14892339
Alignment:
Q  31 ggtagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatactt 99  Q
    ||||| ||||| ||||||||||||| | |||||||| ||||||||| |||| |||||||| ||||||||    
T  14892407 ggtagcatttgggtgacatagagttggatgacattggtgacattgatcaatcacaatgttacaatactt 14892339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 592
Target Start/End: Original strand, 31610796 - 31610872
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 592  Q
    |||||| |||||||| |||| |||||||||||||| |||||||||||  ||||| ||||||| | || |||||||||    
T  31610796 aacaacgtcttacattctaacatttgtatttatatattagttaaaaaaaatggtaaaaataagttatgtgaatagtg 31610872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 37961764 - 37961836
Alignment:
Q  98 ttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    ||||||||||||||||||||||||||| |||  | |||||||| |||||||||  ||| |||| |||||||||    
T  37961764 ttgtgtttctctctctttcacaagcattgtggcattgtgattggtcaatgtcacaaatatcactcaactctat 37961836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 561
Target Start/End: Original strand, 3013817 - 3013884
Alignment:
Q  494 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaa 561  Q
    ||||||||| ||| |||||| |||||||| ||| |||||||  |||||||||||||| ||||||||||    
T  3013817 aaatatttattgagataaatcgaacaacaacttgcatgctagcatttgtatttatatattagttaaaa 3013884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 589
Target Start/End: Complemental strand, 7666231 - 7666136
Alignment:
Q  494 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaata 589  Q
    ||||||||| ||| |||||| ||| || ||||||||| | || | |||||||||||| |||| |||||  |||||||||| ||||| |||||||||    
T  7666231 aaatatttattgatataaattgaataatatcttacataccaacaattgtatttatatattagataaaatatatggtcaaagtaaattatatgaata 7666136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 573
Target Start/End: Original strand, 13117461 - 13117524
Alignment:
Q  510 aaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    |||| ||||||||||||| || ||||||||| ||||||||| | ||||||||| ||||||||||    
T  13117461 aaatcgaacaacatcttagatactaatatttatatttatatatcagttaaaaaatatggtcaaa 13117524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 516 - 595
Target Start/End: Original strand, 13125288 - 13125367
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtat 595  Q
    ||||| |||||| |||||||||||||||||||||  ||||||||||| |||||| ||| ||| |||  ||||||| ||||    
T  13125288 aacaatatcttagatgctaatatttgtatttatacattagttaaaaaatatggtgaaagtaagtcaagtgaatagagtat 13125367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 516 - 619
Target Start/End: Original strand, 36719467 - 36719565
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||| |||||||||||||||||||     || |||||||||||||||||| ||| |||  |||||||||  | ||||||||||  || ||||    
T  36719467 aacaacatcttaaatgctaatatttgtattta-----tacttaaaaagtatggtcaaagtaagtcaagtgaatagtgcttgttgcaaaaattggacatgt 36719561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 2828612 - 2828694
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    |||||||| ||||| |||||||   ||| ||||||||||||||||||||| |||||| |||| | ||||||||  ||||||||    
T  2828612 tgacattggccaatcacaatgtcaaaatgcttgtgtttctctctctttcagaagcattgtgacattgtgattggccaatgtca 2828694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 45213893 - 45213930
Alignment:
Q  133 tgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    |||||||| |||||||||||||||||||||||||||||    
T  45213893 tgtgattggtcaatgtcatcaatgtcacccaactctat 45213930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 29925680 - 29925580
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactc 167  Q
    |||||||| ||||| ||||||   ||||  |||||||||||||||||||||||||||  ||| | |||||  |  |||||||| |||| |||||||||||    
T  29925680 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattctgacattgtgaggggccaatgtcaccaatatcacccaactc 29925581  T
Q  168 t 168  Q
    |    
T  29925580 t 29925580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 33018620 - 33018680
Alignment:
Q  115 tcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctatatcat 175  Q
    |||||||||| |||| | ||||||||| |||| ||| ||||||||||||||||||| ||||    
T  33018620 tcacaagcattgtgacattgtgattgaccaatatcaccaatgtcacccaactctatgtcat 33018680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 553 - 592
Target Start/End: Complemental strand, 13598523 - 13598484
Alignment:
Q  553 tagttaaaaagtatggtcaaaataaatcatatgaatagtg 592  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  13598523 tagttaaaaagtatggtcaaagtaagtcatatgaatagtg 13598484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 16514559 - 16514500
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    ||||||||||||| ||||| |||| |||||||||||||| |||||||  |||| ||||||    
T  16514559 gtgacatagagttgggtgagattggtgacattgaccaatcacaatgtcacaatgcttgtg 16514500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 494 - 589
Target Start/End: Original strand, 19165904 - 19165999
Alignment:
Q  494 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaata 589  Q
    |||||||||  |||| ||||  |||||||||||||||| ||| | |||||||||||| ||| |||||||  ||| |||||| || |||| ||||||    
T  19165904 aaatatttatcgaaacaaattaaacaacatcttacatgataacaattgtatttatatattaattaaaaaccatgatcaaaacaagtcatgtgaata 19165999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 29508693 - 29508736
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaa 86  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||    
T  29508693 gtgacatagagttgggtgacattggtgacattgaccaatcacaa 29508736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 520 - 571
Target Start/End: Original strand, 31904027 - 31904078
Alignment:
Q  520 acatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtca 571  Q
    ||||||||| || |||||||| ||||||||| ||||||||||| ||||||||    
T  31904027 acatcttacgtgataatatttatatttatatattagttaaaaaatatggtca 31904078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 150
Target Start/End: Complemental strand, 37762128 - 37762029
Alignment:
Q  51 gagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    |||||| |||| |||| |||||| |  |||| ||||| |  |||| ||||||||||| |||||||||||||||| | || | |||||||| |||||||||    
T  37762128 gagtttagtgatattggtgacatgggtcaatcacaatatcacaatgcttgtgtttctttctctttcacaagcattgcgacattgtgattggtcaatgtca 37762029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 525 - 579
Target Start/End: Original strand, 3837271 - 3837325
Alignment:
Q  525 ttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaat 579  Q
    ||||||||| |||||| ||||||||| ||||||||||| || ||| |||||||||    
T  3837271 ttacatgctgatatttatatttatatattagttaaaaaatacggttaaaataaat 3837325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 6217227 - 6217272
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 88  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||    
T  6217227 gtgacatagagttgggtgacattggtgacattggccaatcacaatg 6217272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 124
Target Start/End: Complemental strand, 9173116 - 9173035
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 124  Q
    ||||||||||||| |||||||||| ||| |||| ||||| ||||||   |||| ||||| ||||||| ||||| | ||||||    
T  9173116 gtgacatagagttgggtgacattggtgatattggccaatcacaatgccacaatgcttgtatttctctttcttttataagcat 9173035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 4835772 - 4835728
Alignment:
Q  518 caacatcttacatgctaatatttgtatttatatgttagttaaaaa 562  Q
    |||||||||| ||| ||| |||||||||||||| |||||||||||    
T  4835772 caacatcttatatgttaacatttgtatttatatattagttaaaaa 4835728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 5e-33; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 516 - 636
Target Start/End: Original strand, 17213927 - 17214047
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||| ||| ||| |||||||||| | |||||||||||  || ||||    
T  17213927 aacaacatcttacatgctaatatttgtatttataaattagttaaaaagtatagtcaaagtaagtcaaatgaatagtgcacattgcaaaaattagacatgt 17214026  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||| ||||||||||    
T  17214027 attttgaaatggagggagtat 17214047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 516 - 637
Target Start/End: Original strand, 19088101 - 19088222
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  19088101 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 19088200  T
Q  616 attttgaaatcgagggagtata 637  Q
    |||||||||  |||||||||||    
T  19088201 attttgaaacggagggagtata 19088222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 22054891 - 22054783
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| |||||||||||||  || ||||    
T  22054891 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattggacatgt 22054792  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  22054791 attttgaaa 22054783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 516 - 636
Target Start/End: Original strand, 32414822 - 32414942
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||| ||||||  || ||||    
T  32414822 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgaaaaaattggacatgt 32414921  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||  ||||||||||    
T  32414922 attttgaaacggagggagtat 32414942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 516 - 635
Target Start/End: Original strand, 24624084 - 24624203
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||   | ||||    
T  24624084 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgt 24624183  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  24624184 attttgaaacggagggagta 24624203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 516 - 636
Target Start/End: Complemental strand, 4148050 - 4147930
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||  |||||| || | |||||||||||  || ||||    
T  4148050 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgt 4147951  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||  ||||||||||    
T  4147950 attttgaaacggagggagtat 4147930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 516 - 640
Target Start/End: Complemental strand, 29790325 - 29790201
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||| || ||| |||| |||||||| || ||||||||| | ||| ||||    
T  29790325 aacaacaacttacatgctaatatttgtatttatatattagttaaaaattatggtccaagtaagtcatgtgaatagtatacattgcaaaattgcgacatgt 29790226  T
Q  616 attttgaaatcgagggagtatattt 640  Q
    |||||||||  || |||||||||||    
T  29790225 attttgaaacagatggagtatattt 29790201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 493 - 624
Target Start/End: Complemental strand, 4440992 - 4440861
Alignment:
Q  493 taaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 592  Q
    ||||||||||  |||| |||| ||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||| ||| | ||||||||||||    
T  4440992 taaatatttatcgaaacaaatcgaacaacatcttacatgctaacatttgtatttatatgttacctaaaaagtatggtcaaagtaagttatatgaatagtg 4440893  T
Q  593 tatattgcaaaaatacgaaatgtattttgaaa 624  Q
     | ||| ||||||| | | || ||||||||||    
T  4440892 cacattacaaaaatgcaacatatattttgaaa 4440861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 516 - 635
Target Start/End: Complemental strand, 6563345 - 6563226
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  | ||||||| | |||||||||||   | ||||    
T  6563345 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaattgaacatgt 6563246  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  6563245 attttgaaacggagggagta 6563226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 516 - 639
Target Start/End: Original strand, 18668831 - 18668954
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||  || |||  ||||||||| | |||||||||||  || ||||    
T  18668831 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagcaagtcaagtgaatagtgcacattgcaaaaattggacatgt 18668930  T
Q  616 attttgaaatcgagggagtatatt 639  Q
    |||||||||  |||||||||||||    
T  18668931 attttgaaacggagggagtatatt 18668954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 491 - 624
Target Start/End: Complemental strand, 17155293 - 17155160
Alignment:
Q  491 tgtaaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatag 590  Q
    |||||||||||  ||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||| ||  |||| |||||||    
T  17155293 tgtaaatattttttgaaacaaattgaacaacatcttacatgctaacatttgtatttatatgttagttatgaagtatgatcaaagtaggtcatgtgaatag 17155194  T
Q  591 tgtatattgcaaaaatacgaaatgtattttgaaa 624  Q
    || | |||  ||||| |||| |||||||||||||    
T  17155193 tgaacattttaaaaaaacgacatgtattttgaaa 17155160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 15383073 - 15383181
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||| ||| ||| ||||||| || | |||||||||||  || ||||    
T  15383073 aacaacatcttacatgctaatatttgtatttatagattagttaaaaagtatggttaaagtaagtcaaatgaataatgcacattgcaaaaattggacatgt 15383172  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  15383173 attttgaaa 15383181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 20226441 - 20226549
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||| |||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||| |||||||||| | |||||||||||   | ||||    
T  20226441 aacaacgtcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattgtacatgt 20226540  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  20226541 attttgaaa 20226549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 22120425 - 22120533
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||| |||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||| |||||||||| | |||||||||||   | ||||    
T  22120425 aacaacgtcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattgtacatgt 22120524  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  22120525 attttgaaa 22120533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 24618711 - 24618609
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactc 167  Q
    |||| ||||||||| |||||||  |||| ||||||||||||||||||||| ||||||  ||| | |||||||||||||||||| ||||||||||||||||    
T  24618711 tgacgttgaccaatcacaatgtcacaatgcttgtgtttctctctctttcataagcattatgacattgtgattgatcaatgtcaccaatgtcacccaactc 24618612  T
Q  168 tat 170  Q
    |||    
T  24618611 tat 24618609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 516 - 605
Target Start/End: Complemental strand, 1040943 - 1040854
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 605  Q
    |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||| |||||||  ||||||||| | ||||||||||    
T  1040943 aacaacatcttacatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgcaaaaa 1040854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 15337607 - 15337499
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||| | || |||||| || |||||| |||| |  |||||||    
T  15337607 aacaacattttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaataatgcatattgtaaaattgtgaaatgt 15337508  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  15337507 attttgaaa 15337499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 17257794 - 17257902
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| ||| |||  |||||| || | |||||||||||  || ||||    
T  17257794 aacaacatcttacatgctaatatttgtatttgtacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattagacatgt 17257893  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  17257894 attttgaaa 17257902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 516 - 636
Target Start/End: Complemental strand, 32671935 - 32671815
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||| |||||||||| ||| | |  ||||||||| | |||||||||||  || ||||    
T  32671935 aacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgcaaaaattggacatgt 32671836  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||  ||||||||||    
T  32671835 attttgaaacggagggagtat 32671815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 516 - 625
Target Start/End: Complemental strand, 28477872 - 28477763
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||  || |||| ||||||||  | ||||||||| |  || ||||    
T  28477872 aacaacaacttacatgctaatatttgtatttatatattagttaaaaattatggtcaaagcaagtcatgtgaatagtacacattgcaaaattgtgacatgt 28477773  T
Q  616 attttgaaat 625  Q
    ||||||||||    
T  28477772 attttgaaat 28477763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 39 - 170
Target Start/End: Original strand, 17750902 - 17751032
Alignment:
Q  39 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgat 138  Q
    ||||||||||||||||| | |||||||| ||||||||  |||| |||||||  ||||  |||| ||| |||||||||||||||||| |||| | ||||||    
T  17750902 ttgtgtgacatagagtt-gatgacattggtgacattggtcaatcacaatgtcacaatgtttgtatttatctctctttcacaagcattgtgacattgtgat 17751000  T
Q  139 tgatcaatgtcatcaatgtcacccaactctat 170  Q
     |  ||||||||||||| ||||||||||||||    
T  17751001 cggccaatgtcatcaatatcacccaactctat 17751032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 519 - 604
Target Start/End: Original strand, 3623856 - 3623940
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 604  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| ||||  ||||||||| ||||||||| ||||    
T  3623856 aacatcttacatgctaacatttgtatttatatattagttaaaaa-tatggtcaaagtaaactatatgaataatgtatattgtaaaa 3623940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 516 - 621
Target Start/End: Original strand, 3989407 - 3989511
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||||||||| ||||||||| |  |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  3989407 aacaacatcttacatgctaatagttgtattta-acattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 3989505  T
Q  616 attttg 621  Q
    ||||||    
T  3989506 attttg 3989511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 519 - 624
Target Start/End: Complemental strand, 31869824 - 31869719
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtatt 618  Q
    ||||||||||||||||| |||||||||||||| |||||||||||  ||||||||| ||||| ||  |||||||||| |||| ||||   ||| |||||||    
T  31869824 aacatcttacatgctaacatttgtatttatatattagttaaaaaaaatggtcaaagtaaattatgggaatagtgtacattgtaaaatcgcgacatgtatt 31869725  T
Q  619 ttgaaa 624  Q
    ||||||    
T  31869724 ttgaaa 31869719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 518 - 625
Target Start/End: Complemental strand, 29694000 - 29693893
Alignment:
Q  518 caacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtat 617  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||||| ||||||||||  || |||| ||||||||  | ||||||||| |  || ||||||    
T  29694000 caacaacttacatgctagtatttgtatttatatattagttaaaaattatggtcaaagcaagtcatgtgaatagtacacattgcaaaattgtgacatgtat 29693901  T
Q  618 tttgaaat 625  Q
    ||||||||    
T  29693900 tttgaaat 29693893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 12343152 - 12343230
Alignment:
Q  92 caatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    |||| |||||||||||||||||||||||||||| |||| | ||||||||  |||||||| |||| ||||||||||||||    
T  12343152 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtcaccaatctcacccaactctat 12343230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 522 - 604
Target Start/End: Original strand, 19240741 - 19240823
Alignment:
Q  522 atcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 604  Q
    ||||||| ||| ||||||||||||||||| ||||||||||| |||||||||||||| | || |||||||| || |||||||||    
T  19240741 atcttacttgcaaatatttgtatttatatattagttaaaaaatatggtcaaaataagttatgtgaatagtatacattgcaaaa 19240823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 36 - 150
Target Start/End: Complemental strand, 551307 - 551193
Alignment:
Q  36 tatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgt 135  Q
    |||||| |||||||||| || | ||| |||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||| ||| |||  | |||    
T  551307 tatttgggtgacatagaattggatgatattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaaacattgtggcattgt 551208  T
Q  136 gattgatcaatgtca 150  Q
    |||||| ||||||||    
T  551207 gattgaccaatgtca 551193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 13043509 - 13043587
Alignment:
Q  92 caatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    |||| |||||||||||||||||||||||||||| |||||| |||||||   |||||||| |||| |||| |||||||||    
T  13043509 caatgcttgtgtttctctctctttcacaagcattgtgatattgtgattagccaatgtcaccaatatcactcaactctat 13043587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 516 - 606
Target Start/End: Original strand, 24955539 - 24955629
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaat 606  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| |||| ||||||||| |||  |||||| || | ||| |||||||    
T  24955539 aacaacatcttacatgctaatatttgtatttattcattagttaaaaaatatgatcaaaataagtcaagtgaataatgcacattacaaaaat 24955629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 577
Target Start/End: Complemental strand, 12226094 - 12226033
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataa 577  Q
    ||||| ||||||||||||||||||| ||||||||  |||||||||||||||| |||||||||    
T  12226094 aacaatatcttacatgctaatatttatatttatacattagttaaaaagtatgatcaaaataa 12226033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 516 - 591
Target Start/End: Complemental strand, 2360109 - 2360034
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagt 591  Q
    |||||||| ||||||||||| |||| ||||||||| ||||||||||| ||| |||||| ||||| |||| ||||||    
T  2360109 aacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaaattatataaatagt 2360034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 516 - 635
Target Start/End: Original strand, 25475956 - 25476070
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||||||||     ||||||||  |||||||||||||| ||||||| ||| |||  |||||| || | |||||||||||  || ||||    
T  25475956 aacaacatcttacatgctaat-----tatttatacattagttaaaaagtaaggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgt 25476050  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  25476051 attttgaaacggagggagta 25476070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 578
Target Start/End: Complemental strand, 5495368 - 5495306
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaa 578  Q
    ||||| |||||||||||||| |||||||||||||| |||||||||||  ||| ||||||||||    
T  5495368 aacaaaatcttacatgctaacatttgtatttatatattagttaaaaaacatgatcaaaataaa 5495306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 519 - 625
Target Start/End: Original strand, 21540775 - 21540881
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtatt 618  Q
    ||||| ||||||  |||||||||||||||||   ||||| ||||||||||||||| ||| ||| |||||||||| | |||| ||||||   | |||||||    
T  21540775 aacattttacattataatatttgtatttataaactagtttaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaattaaacatgtatt 21540874  T
Q  619 ttgaaat 625  Q
    |||||||    
T  21540875 ttgaaat 21540881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 24587464 - 24587550
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtga 129  Q
    ||||||||||||| |||||||||  ||||||||  |||| |||||||  |||| |||||||||||| || |||||||||||| ||||    
T  24587464 gtgacatagagttgggtgacattagtgacattggtcaatcacaatgtcacaatgcttgtgtttctcgctttttcacaagcattgtga 24587550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 522 - 624
Target Start/End: Original strand, 31569175 - 31569277
Alignment:
Q  522 atcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtattttg 621  Q
    ||||||||| ||||||||||||||||||  ||| | ||||||||| |||||| ||| |||  |||||| || | |||||||||||  || ||||||||||    
T  31569175 atcttacattctaatatttgtatttatacattaataaaaaagtatagtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttg 31569274  T
Q  622 aaa 624  Q
    |||    
T  31569275 aaa 31569277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 516 - 573
Target Start/End: Original strand, 23158052 - 23158109
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    |||||||||||||||| ||| |||||||||||||| ||||||||||| | ||||||||    
T  23158052 aacaacatcttacatgttaacatttgtatttatatattagttaaaaaatgtggtcaaa 23158109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 519 - 571
Target Start/End: Complemental strand, 8101716 - 8101664
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtca 571  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||| ||||||||    
T  8101716 aacatcttacatgttaacatttgtatttatatattagttaaaaaatatggtca 8101664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 619
Target Start/End: Original strand, 20437156 - 20437260
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagtt-aaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatg 614  Q
    |||||||||||||||| | |||||||||||||||  |||||| ||||| |||| ||||| ||| |||  ||||||||| | |||||||||||  || |||    
T  20437156 aacaacatcttacatgttgatatttgtatttatacattagttaaaaaaatatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatg 20437255  T
Q  615 tattt 619  Q
    |||||    
T  20437256 tattt 20437260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 519 - 573
Target Start/End: Original strand, 10298719 - 10298773
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    ||||| ||||||||||| |||||||||||||| ||||| ||||| ||||||||||    
T  10298719 aacattttacatgctaacatttgtatttatatattagtgaaaaaatatggtcaaa 10298773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 31654333 - 31654390
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatg 125  Q
    |||||||| ||||| |||||||  |||| |||||||||||||||||||||||| ||||    
T  31654333 tgacattggccaatcacaatgtcacaatgcttgtgtttctctctctttcacaaacatg 31654390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 517 - 573
Target Start/End: Complemental strand, 1260548 - 1260492
Alignment:
Q  517 acaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    |||| ||||||| |||||| | |||||||||||| ||||||||||| ||||||||||    
T  1260548 acaaaatcttacgtgctaacaattgtatttatatattagttaaaaaatatggtcaaa 1260492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 10520587 - 10520479
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||| ||||||  |||||| ||||||||||  |||||||| | ||||||||||| ||| ||| ||||||| |  | |||||||||||   | ||||    
T  10520587 aacaacattttacatattaatatctgtatttatacattagttaataggtatggtcaaagtaagtcaaatgaataatacacattgcaaaaattgaacatgt 10520488  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  10520487 attttgaaa 10520479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 17751041 - 17750978
Alignment:
Q  39 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    ||||||||||||||||| ||||| ||||||||||||| || || |||||||  |||| ||||||    
T  17751041 ttgtgtgacatagagttgggtgatattgatgacattggccgatcacaatgtcacaatgcttgtg 17750978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 10521959 - 10521877
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    ||||||||  |||| |||||||   ||| ||||||||||||||||||||| |||||| |||| | ||||||||  ||||||||    
T  10521959 tgacattggtcaatcacaatgtcataatgcttgtgtttctctctctttcataagcattgtgacattgtgattggccaatgtca 10521877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 24587523 - 24587469
Alignment:
Q  116 cacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    ||||||||| |||| | ||||||||| ||||||||  ||||||||||||||||||    
T  24587523 cacaagcattgtgacattgtgattgaccaatgtcactaatgtcacccaactctat 24587469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 24618604 - 24618650
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgt 89  Q
    ||||||||||||| |||||||||| ||||||||| |||| |||||||    
T  24618604 gtgacatagagttgggtgacattggtgacattgatcaatcacaatgt 24618650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 2315381 - 2315332
Alignment:
Q  101 tgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    |||||| ||||||||||||| ||| |||| | ||||||||||||||||||    
T  2315381 tgtttcgctctctttcacaaacattgtgacattgtgattgatcaatgtca 2315332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 569
Target Start/End: Complemental strand, 28556798 - 28556737
Alignment:
Q  508 ataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggt 569  Q
    |||||| || |||||||||||||| |||  ||||||| ||||| ||| ||||||||||||||    
T  28556798 ataaattgagcaacatcttacatgataaattttgtatgtatattttaattaaaaagtatggt 28556737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 516 - 544
Target Start/End: Original strand, 16193025 - 16193053
Alignment:
Q  516 aacaacatcttacatgctaatatttgtat 544  Q
    |||||||||||||||||||||||||||||    
T  16193025 aacaacatcttacatgctaatatttgtat 16193053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 494 - 562
Target Start/End: Original strand, 26567265 - 26567333
Alignment:
Q  494 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 562  Q
    ||||||||  ||| |||||| ||||||| | ||||||||||  |||| ||||||||| |||||||||||    
T  26567265 aaatatttgttgagataaattgaacaacgttttacatgctaccatttatatttatatattagttaaaaa 26567333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 5e-33; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 21797675 - 21797567
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||  ||||||||| | |||||||||||  || ||||    
T  21797675 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataaatcaagtgaatagtgcacattgcaaaaattggacatgt 21797576  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  21797575 attttgaaa 21797567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 516 - 636
Target Start/End: Original strand, 42490339 - 42490459
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  42490339 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 42490438  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||  ||||||||||    
T  42490439 attttgaaacggagggagtat 42490459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 516 - 635
Target Start/End: Original strand, 13499478 - 13499597
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  13499478 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 13499577  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  13499578 attttgaaacggagggagta 13499597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 30734537 - 30734410
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| |||||||||| |||||||| ||||| |||||||   ||||||||||||||||| |||||||||||||| |||| | |||||| | |    
T  30734537 gtgacatagagttaggtgacattggtgacattggccaatcacaatgtcataatacttgtgtttctctatctttcacaagcattgtgacattgtgatcggt 30734438  T
Q  143 caatgtcatcaatgtcacccaactctat 170  Q
    ||||||||||||||||||| ||||||||    
T  30734437 caatgtcatcaatgtcaccaaactctat 30734410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 491 - 624
Target Start/End: Complemental strand, 44561928 - 44561795
Alignment:
Q  491 tgtaaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatag 590  Q
    ||||||||||||  |||| |||| |||||||||||||||||  || ||||||||||||||||||||||||||||||||||||| ||| |||| |||||||    
T  44561928 tgtaaatatttatcgaaacaaatcgaacaacatcttacatgtcaacatttgtatttatatgttagttaaaaagtatggtcaaagtaagtcatgtgaatag 44561829  T
Q  591 tgtatattgcaaaaatacgaaatgtattttgaaa 624  Q
    || | |||||||| || | | |||||||||||||    
T  44561828 tgcacattgcaaacatgcaacatgtattttgaaa 44561795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 516 - 636
Target Start/End: Original strand, 27010617 - 27010737
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  27010617 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 27010716  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||  ||||||||||    
T  27010717 attttgaaacggagggagtat 27010737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 516 - 636
Target Start/End: Original strand, 39866284 - 39866404
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  39866284 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 39866383  T
Q  616 attttgaaatcgagggagtat 636  Q
    ||||| |||  ||||||||||    
T  39866384 attttaaaacggagggagtat 39866404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 516 - 635
Target Start/End: Original strand, 42761626 - 42761745
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||| ||||||  || ||||    
T  42761626 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgt 42761725  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  42761726 attttgaaacggagggagta 42761745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 27334874 - 27334982
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||   | ||||    
T  27334874 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgt 27334973  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  27334974 attttgaaa 27334982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 516 - 636
Target Start/End: Complemental strand, 33415918 - 33415798
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| || ||||  | | |||||||||||  || ||||    
T  33415918 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaataaataacgcacattgcaaaaattggacatgt 33415819  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||  ||||||||||    
T  33415818 attttgaaacagagggagtat 33415798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 516 - 597
Target Start/End: Complemental strand, 30213923 - 30213842
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatat 597  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||  ||||||||| ||||    
T  30213923 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaagtgaatagtgcatat 30213842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 516 - 636
Target Start/End: Complemental strand, 20765315 - 20765195
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  20765315 aacaacatcttacatgttaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 20765216  T
Q  616 attttgaaatcgagggagtat 636  Q
    ||||| |||  ||||||||||    
T  20765215 attttaaaacggagggagtat 20765195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 54507760 - 54507652
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||| ||||||||||  |||||||||||||||  ||||||||| |||  ||||||||| |||||||||||||  || ||||    
T  54507760 aacaacatcttacatgctaatatctgtatttatacattagttaaaaagtataatcaaaataagtcaagtgaatagtgcatattgcaaaaattggatatgt 54507661  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  54507660 attttgaaa 54507652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 33689175 - 33689286
Alignment:
Q  39 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgat 138  Q
    ||||||||||||||||| |||||||||||||| ||||  |||| |||||||  |||| |||||||||||||||||||||||||||| |||| | ||||||    
T  33689175 ttgtgtgacatagagttgggtgacattgatgatattggtcaatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgat 33689274  T
Q  139 tgatcaatgtca 150  Q
    ||  ||||||||    
T  33689275 tggccaatgtca 33689286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 516 - 605
Target Start/End: Complemental strand, 38137943 - 38137854
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 605  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||   |||||||| | ||||||||||    
T  38137943 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaaataaatcaagcgaatagtgcagattgcaaaaa 38137854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 43 - 164
Target Start/End: Complemental strand, 47492182 - 47492061
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| |||||||||| | | |||| ||||| |||||||  |||| ||||||||||||||| |||||||||||| |||| | ||||||||      
T  47492182 gtgacatagagttgggtgacattggtcatattggccaatcacaatgtcacaatgcttgtgtttctctctttttcacaagcattgtgacattgtgattggc 47492083  T
Q  143 caatgtcatcaatgtcacccaa 164  Q
    |||||||| |||||||||||||    
T  47492082 caatgtcaccaatgtcacccaa 47492061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 43 - 176
Target Start/End: Complemental strand, 51046208 - 51046075
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| | |||||||| |||||||| ||||| ||||||    ||| |||||||||||||||||||||||| ||| |||| | | ||||||||    
T  51046208 gtgacatagagttggatgacattggtgacattggccaatcacaatgccataatgcttgtgtttctctctctttcacaaacattgtgacattatgattgat 51046109  T
Q  143 caatgtcatcaatgtcacccaactctatatcatc 176  Q
    |||||||| |||| ||| |||||||||| |||||    
T  51046108 caatgtcaccaatatcatccaactctatgtcatc 51046075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 516 - 639
Target Start/End: Complemental strand, 21005412 - 21005289
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||| ||| | |  ||||||||| |  ||||||||||   | ||||    
T  21005412 aacaacatcttacatgctaatatttatatttatatattaattaaaaagtatggtcaaagtaagtgaagtgaatagtgcacgttgcaaaaattgaacatgt 21005313  T
Q  616 attttgaaatcgagggagtatatt 639  Q
    |||||||||  |||||||||||||    
T  21005312 attttgaaacggagggagtatatt 21005289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 517 - 624
Target Start/End: Original strand, 34912286 - 34912393
Alignment:
Q  517 acaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgta 616  Q
    |||||||||||||  ||||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || |||||    
T  34912286 acaacatcttacaatctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgta 34912385  T
Q  617 ttttgaaa 624  Q
    ||||||||    
T  34912386 ttttgaaa 34912393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 41752967 - 41753094
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   ||||  |||||||||| |||||||||||||||| |||  | ||||||||      
T  41752967 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtgtttctttctctttcacaagcattgtggcattgtgattggc 41753066  T
Q  143 caatgtcatcaatgtcacccaactctat 170  Q
    |||||||| ||||||||| |||||||||    
T  41753067 caatgtcaccaatgtcactcaactctat 41753094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 36 - 150
Target Start/End: Complemental strand, 43139851 - 43139737
Alignment:
Q  36 tatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgt 135  Q
    |||||| ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| ||||||||||||||||||||||||||||  ||| | |||    
T  43139851 tatttgggtgacatagagttgggtgacattggtgacattggccaataacaatgccacaatgcttgtgtttctctctctttcacaagcattctgacattgt 43139752  T
Q  136 gattgatcaatgtca 150  Q
    |||||| | ||||||    
T  43139751 gattgaccgatgtca 43139737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 516 - 630
Target Start/End: Complemental strand, 33803641 - 33803526
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaa-gtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatg 614  Q
    |||||||||||||| |||||||||| ||||||||  ||||||||||| ||||||||||| ||| |||  ||||||||| | |||||||||||  || |||    
T  33803641 aacaacatcttacaagctaatatttatatttatacattagttaaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatg 33803542  T
Q  615 tattttgaaatcgagg 630  Q
    ||||||||||| ||||    
T  33803541 tattttgaaatagagg 33803526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 50524706 - 50524832
Alignment:
Q  44 tgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatc 143  Q
    ||||||||||||  |||| | ||||||||||||||||| | |||||  ||||  ||||||||||||||||||||||||||| || | | |||||||||      
T  50524706 tgacatagagttgagtgataatgatgacattgaccaatcataatgtcacaatgtttgtgtttctctctctttcacaagcatcgtaacattgtgattgact 50524805  T
Q  144 aatgtcatcaatgtcacccaactctat 170  Q
    ||| ||| ||||||||| |||||||||    
T  50524806 aatatcaccaatgtcactcaactctat 50524832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 516 - 589
Target Start/End: Complemental strand, 52167328 - 52167255
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaata 589  Q
    |||||||||||||||  |||||||||||||||||| ||| ||||||||||||||||||| || |||||||||||    
T  52167328 aacaacatcttacatattaatatttgtatttatatattaattaaaaagtatggtcaaaagaagtcatatgaata 52167255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 6910453 - 6910345
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||| |||||||||||||||||  ||||||||||| |||||| ||| ||| |||  ||||||||||| |||| |||| |  || ||||    
T  6910453 aacaacatcttacatgttaatatttgtatttatacattagttaaaaaatatggttaaagtaagtcaagtgaatagtgtacattgtaaaagttggacatgt 6910354  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  6910353 attttgaaa 6910345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 491 - 566
Target Start/End: Complemental strand, 44856490 - 44856415
Alignment:
Q  491 tgtaaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtat 566  Q
    ||||||||||||  |||| |||  |||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  44856490 tgtaaatatttatcgaaacaaaacgaacaacatcttacatactaacatttgtatttatatgttagttaaaaagtat 44856415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 516 - 635
Target Start/End: Original strand, 48334664 - 48334782
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||  ||||| ||| ||||  || |||||| |||| |||| |||| ||||| ||||    
T  48334664 aacaacatcttacatgctaatatttgtatttatat-atagttaaaaaaaatggttaaagtaaactatgtgaataatgtacattgtaaaattacgagatgt 48334762  T
Q  616 attttgaaatcgagggagta 635  Q
    ||||| |||  |||||||||    
T  48334763 attttaaaacggagggagta 48334782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 55223231 - 55223338
Alignment:
Q  39 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgat 138  Q
    ||||||||||||||||| |||||||||| ||| ||||  |||| ||||| ||  ||||||| |||||||||||||||||||||||| |||| | | ||||    
T  55223231 ttgtgtgacatagagttaggtgacattggtgatattggtcaatcacaatattagaatacttatgtttctctctctttcacaagcattgtgacattatgat 55223330  T
Q  139 tgatcaat 146  Q
    ||| ||||    
T  55223331 tgaccaat 55223338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 1801556 - 1801454
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactc 167  Q
    |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||  | ||||||||  |||||||| ||||||||||||||||    
T  1801556 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactc 1801457  T
Q  168 tat 170  Q
    |||    
T  1801456 tat 1801454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 606
Target Start/End: Complemental strand, 36227664 - 36227574
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaat 606  Q
    ||||||||||||||||||||||||||||||||||  ||| || |||| |||||||||| ||| ||| ||||||||||   |||||||||||    
T  36227664 aacaacatcttacatgctaatatttgtatttatacattaattgaaaaatatggtcaaagtaagtcaaatgaatagtgcgcattgcaaaaat 36227574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 50549992 - 50550085
Alignment:
Q  57 ggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    ||||| |||| |||||||||||||| ||||| || |||| |||||||||||||||||||||||| |||  ||| | | ||||||||||||||||    
T  50549992 ggtgatattggtgacattgaccaatcacaatattacaatgcttgtgtttctctctctttcacaaacattatgacattatgattgatcaatgtca 50550085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 516 - 635
Target Start/End: Complemental strand, 19824013 - 19823900
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||||||||||||      |||  |||||||||||||||||||||| ||| |||  ||||||||| | |||||||||||  || ||||    
T  19824013 aacaacatcttacatgctaatattt------atacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 19823920  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||  |||||||||    
T  19823919 attttgaaacggagggagta 19823900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 30734401 - 30734464
Alignment:
Q  39 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||  |||| ||||||    
T  30734401 ttgtgtgacatagagtttggtgacattgatgacattgaccgatcacaatgtcacaatgcttgtg 30734464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 170
Target Start/End: Complemental strand, 45103180 - 45103117
Alignment:
Q  107 tctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    |||||||||||||||||| |||| | |||||||||||||| ||| |||||||||||||||||||    
T  45103180 tctctctttcacaagcattgtgacattgtgattgatcaatatcaccaatgtcacccaactctat 45103117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 573
Target Start/End: Original strand, 15332949 - 15333006
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| | ||||||||    
T  15332949 aacaacatcttacatgctaacatttgtatttatatattagttaaaaaatttggtcaaa 15333006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 519 - 624
Target Start/End: Original strand, 41252909 - 41253014
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgtatt 618  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||| |||||| ||| |||   |||||||||||| | |||| |||| | ||| || ||||    
T  41252909 aacatcttatatgctaacatttgtatttatatattagttaaaaaatatggttaaagtaagctatatgaatagtgcacattgtaaaattgcgacatatatt 41253008  T
Q  619 ttgaaa 624  Q
    ||||||    
T  41253009 ttgaaa 41253014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 592
Target Start/End: Original strand, 43181498 - 43181575
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagtt-aaaaagtatggtcaaaataaatcatatgaatagtg 592  Q
    ||||||||||||||| ||||||||| ||||||||  |||||| |||||||||||||||| |||||||  |||||||||    
T  43181498 aacaacatcttacatactaatatttatatttatacattagttaaaaaagtatggtcaaagtaaatcaagtgaatagtg 43181575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 43467885 - 43467993
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||| |||||||||| | |||||||  | |||||||||||||||||||| ||| |||  ||||||||  | |||||||||||  |  ||||    
T  43467885 aacaacatcttacctgctaatattagaatttatacatcagttaaaaagtatggtcaaagtaagtcaagtgaatagtacacattgcaaaaattggtcatgt 43467984  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  43467985 attttgaaa 43467993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 519 - 589
Target Start/End: Complemental strand, 25527520 - 25527450
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaata 589  Q
    ||||||||||||| |||||||||||||||||| | ||||||||| ||||||| || ||| |||| ||||||    
T  25527520 aacatcttacatgttaatatttgtatttatatatcagttaaaaaatatggtcgaagtaagtcatgtgaata 25527450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 30476584 - 30476502
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    ||||||||  |||| |||||||  |||| |||||||||||||||||||||||||||| |||| | ||||||||  ||||||||    
T  30476584 tgacattggtcaatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtca 30476502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 30580890 - 30580764
Alignment:
Q  44 tgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatc 143  Q
    ||||||||| || |||||||||  ||||||||  |||| |||||||  || | ||||||||||| ||||||||||||  || |||| | | |||||| ||    
T  30580890 tgacatagaattgggtgacatttgtgacattggtcaatcacaatgtcacagtgcttgtgtttctatctctttcacaaatattgtgacattatgattggtc 30580791  T
Q  144 aatgtcatcaatgtcacccaactctat 170  Q
    ||| ||| ||||||||||||| |||||    
T  30580790 aatatcaccaatgtcacccaattctat 30580764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 47677365 - 47677283
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    ||||||||| |||| |||||||  ||||  ||||||||||||||||||||||||||| |||| | |||||| | |||||||||    
T  47677365 tgacattgatcaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgatcggtcaatgtca 47677283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 519 - 592
Target Start/End: Original strand, 3430420 - 3430493
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 592  Q
    ||||| |||||||||||||||| |||| |||| ||||||||||| |||||||||| ||| | |||| |||||||    
T  3430420 aacattttacatgctaatatttttattaatatattagttaaaaaatatggtcaaagtaagttatataaatagtg 3430493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 29031814 - 29031746
Alignment:
Q  78 caattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaat 146  Q
    ||||||||||||  ||||  ||||||||||||||||||||||||||| |||| | ||||||||| ||||    
T  29031814 caattacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattgaccaat 29031746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 30904296 - 30904368
Alignment:
Q  92 caatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaa 164  Q
    |||| ||||||||||||||||||| | ||  || |||||| |||||||||| ||||||||| |||||||||||    
T  30904296 caatgcttgtgtttctctctcttttataaatattgtgatattgtgattgattaatgtcatcgatgtcacccaa 30904368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 517 - 577
Target Start/End: Original strand, 33128063 - 33128123
Alignment:
Q  517 acaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataa 577  Q
    |||| |||||||||| |||||||| ||||||| | |||||||||||||||| |||||||||    
T  33128063 acaatatcttacatgttaatatttatatttatgtattagttaaaaagtatgatcaaaataa 33128123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 33689238 - 33689184
Alignment:
Q  116 cacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    ||||||||| |||| | ||||||||| |||| |||||||||||||||||||||||    
T  33689238 cacaagcattgtgacattgtgattgaccaatatcatcaatgtcacccaactctat 33689184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 510 - 615
Target Start/End: Complemental strand, 20410201 - 20410098
Alignment:
Q  510 aaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacg 609  Q
    |||| |||||||||||||||   ||| |||||||| ||||| || |||||||  || ||| ||||||||||||||||||| || ||||||||||||| ||    
T  20410201 aaatcgaacaacatcttacaaattaacatttgtatctatatatt-gttaaaatatacggtaaaaataaatcatatgaata-tgcatattgcaaaaatgcg 20410104  T
Q  610 aaatgt 615  Q
    | ||||    
T  20410103 acatgt 20410098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 573
Target Start/End: Original strand, 41751553 - 41751610
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    ||||||||| || ||||||| |||||||||||||| ||||||||||| |||| |||||    
T  41751553 aacaacatcgtaaatgctaacatttgtatttatatattagttaaaaaatatgatcaaa 41751610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 517 - 637
Target Start/End: Original strand, 19327474 - 19327594
Alignment:
Q  517 acaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgta 616  Q
    ||||||||||| || |||| |||||||| ||| | ||||||||||| ||||||  || ||| | || ||||||||| ||||||  | | ||||| | |||    
T  19327474 acaacatcttagatcctaacatttgtatctatctattagttaaaaaatatggtttaagtaagttatgtgaatagtgcatattgtcacactacgacacgta 19327573  T
Q  617 ttttgaaatcgagggagtata 637  Q
    ||||| ||| |||||||||||    
T  19327574 ttttggaatggagggagtata 19327594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 519 - 587
Target Start/End: Original strand, 23940508 - 23940576
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaa 587  Q
    ||||||||||||| ||| |||| ||||||||| ||||||||||| || ||||||  ||||| |||||||    
T  23940508 aacatcttacatgttaacatttttatttatatattagttaaaaaataaggtcaatgtaaattatatgaa 23940576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 519 - 638
Target Start/End: Complemental strand, 37766168 - 37766044
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaa-----aataaatcatatgaatagtgtatattgcaaaaatacgaaat 613  Q
    ||||||||| | ||||||| ||||||| |||||||||||||||||||  |||||     | |||||||| | ||||||| | |||||||| ||  ||  |    
T  37766168 aacatcttagaggctaatacttgtattcatatgttagttaaaaagtacagtcaaattatagtaaatcatgttaatagtgcacattgcaaatatgagacgt 37766069  T
Q  614 gtattttgaaatcgagggagtatat 638  Q
    |||||||||||| || |||||||||    
T  37766068 gtattttgaaatggatggagtatat 37766044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 39385798 - 39385746
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaa 120  Q
    |||||||| ||||| |||||||| ||||| |||| ||||||||||||||||||    
T  39385798 tgacattggccaatcacaatgttacaatatttgtatttctctctctttcacaa 39385746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 571
Target Start/End: Complemental strand, 17643850 - 17643795
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtca 571  Q
    ||||| |||||||||||||| ||||||||||| || ||||||||||| ||| ||||    
T  17643850 aacaatatcttacatgctaacatttgtatttacatattagttaaaaaatatagtca 17643795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 530 - 577
Target Start/End: Original strand, 27813445 - 27813492
Alignment:
Q  530 tgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataa 577  Q
    |||||| |||||||||||||| ||||||||||| ||| ||||||||||    
T  27813445 tgctaacatttgtatttatatattagttaaaaaatatagtcaaaataa 27813492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 524 - 574
Target Start/End: Complemental strand, 3017902 - 3017852
Alignment:
Q  524 cttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaa 574  Q
    |||| ||||||| ||||||||||||||  |||||||||| |||||||||||    
T  3017902 cttatatgctaacatttgtatttatataatagttaaaaaatatggtcaaaa 3017852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 516 - 578
Target Start/End: Original strand, 15568078 - 15568140
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaa 578  Q
    ||||| |||||||| | ||| |||||||||||||| ||||||||||| |||| ||||| ||||    
T  15568078 aacaatatcttacacggtaacatttgtatttatatattagttaaaaaatatgatcaaattaaa 15568140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 519 - 573
Target Start/End: Original strand, 55264659 - 55264713
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    ||||||||||||| |||||||||||| || |||||| ||||||| ||||| ||||    
T  55264659 aacatcttacatgttaatatttgtatctacatgttaattaaaaaatatggacaaa 55264713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 1801449 - 1801494
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 88  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||    
T  1801449 gtgacatagagttgggtgacattggtgacattggccaatcacaatg 1801494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 579
Target Start/End: Original strand, 23224306 - 23224363
Alignment:
Q  523 tcttacatgctaatatttgtatttatatgttagtt-aaaaagtatggtcaaaataaat 579  Q
    |||||||| |||||||||| |||||||| |||||| ||||||||| |||||| |||||    
T  23224306 tcttacattctaatatttgcatttatatattagttaaaaaagtatagtcaaagtaaat 23224363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 47677263 - 47677291
Alignment:
Q  39 ttgtgtgacatagagtttggtgacattga 67  Q
    |||||||||||||||||||||||||||||    
T  47677263 ttgtgtgacatagagtttggtgacattga 47677291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 39 - 170
Target Start/End: Complemental strand, 7185 - 7055
Alignment:
Q  39 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgat 138  Q
    ||||||||||||||||| |||||||||| |||||||| ||||| |||||||  |||| |||||||||||||||||||||||||||| |||| | ||||||    
T  7185 ttgtgtgacatagagtt-ggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgat 7087  T
Q  139 tgatcaatgtcatcaatgtcacccaactctat 170  Q
    ||   ||| ||| |||||||||||||||||||    
T  7086 tggctaatatcaccaatgtcacccaactctat 7055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 516 - 635
Target Start/End: Complemental strand, 71079 - 70961
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||| |||||||||||||||||||||  ||||||||||| |||||||||||||| |||  ||||||||| |||||||||||||  || ||||    
T  71079 aacaacatcttaaatgctaatatttgtatttatacattagttaaaaa-tatggtcaaaataagtcaagtgaatagtgcatattgcaaaaattggacatgt 70981  T
Q  616 attttgaaatcgagggagta 635  Q
    |||||||||| |||||||||    
T  70980 attttgaaatggagggagta 70961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 67912 - 68020
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||| ||| ||| |||||||||| | ||| |||||||  || ||||    
T  67912 aacaacatcttacatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacatttcaaaaattggacatgt 68011  T
Q  616 attttgaaa 624  Q
    |||||||||    
T  68012 attttgaaa 68020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 516 - 636
Target Start/End: Original strand, 161980 - 162100
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||  ||| |||  ||||||||| | ||| |||||||  || ||||    
T  161980 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaatgtaagtcaagtgaatagtgcacattacaaaaattagacatgt 162079  T
Q  616 attttgaaatcgagggagtat 636  Q
    |||||||||  ||||||||||    
T  162080 attttgaaacggagggagtat 162100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 49813 - 49711
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactc 167  Q
    |||||||| ||||| ||||||   |||| ||||||||||||| |||||||||||||| |||| | |||||||| ||||||||||||||||||||||||||    
T  49813 tgacattggccaatcacaatgccacaatgcttgtgtttctctttctttcacaagcattgtgacattgtgattggtcaatgtcatcaatgtcacccaactc 49714  T
Q  168 tat 170  Q
    |||    
T  49713 tat 49711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 49706 - 49765
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||  |||| ||||||    
T  49706 gtgacatagagttgggtgacattgatgacattgaccaatcacaatgtcacaatgcttgtg 49765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 516 - 639
Target Start/End: Original strand, 100790 - 100913
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||| |||||||||| ||| |||  ||||||||| | ||||||||| |   | ||||    
T  100790 aacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtcaagtgaatagtgcacattgcaaaagttgaacatgt 100889  T
Q  616 attttgaaatcgagggagtatatt 639  Q
    |||||||||  |||||||||||||    
T  100890 attttgaaacggagggagtatatt 100913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 516 - 636
Target Start/End: Original strand, 13860 - 13980
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||| |||  ||||||||| | ||| |||| ||  || ||||    
T  13860 aacaacatcttacatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaatattagacatgt 13959  T
Q  616 attttgaaatcgagggagtat 636  Q
    ||||| |||  ||||||||||    
T  13960 attttaaaacggagggagtat 13980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 22899 - 22791
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||||||| |||||||||||||| | ||||||||| | |||||||||||| | || |||||| || |||||| |||| |  |||||||    
T  22899 aacaacatcttacatgctaacatttgtatttatatatgagttaaaaaatgtggtcaaaataagttatgtgaataatgcatattgtaaaattgtgaaatgt 22800  T
Q  616 attttgaaa 624  Q
    ||| |||||    
T  22799 attatgaaa 22791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 8976 - 9084
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| | |||||||| ||| | || |||||| || |||||| |||| |  |||||||    
T  8976 aacaacatcttacatgctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaattgtgaaatgt 9075  T
Q  616 attttgaaa 624  Q
    ||| |||||    
T  9076 attatgaaa 9084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 19202 - 19130
Alignment:
Q  98 ttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatgtcacccaactctat 170  Q
    |||||||||||| |||| ||||||||| |||| | |||||||||||||| |||||||||||||||||||||||    
T  19202 ttgtgtttctctttcttccacaagcattgtgacattgtgattgatcaatatcatcaatgtcacccaactctat 19130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 19119 - 19184
Alignment:
Q  37 atttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 102  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||| |||||||  |||| ||||||    
T  19119 atttgtgtgacatagagttgggtgacattgatgatattgatcaatcacaatgtcacaatgcttgtg 19184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 138173 - 138281
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaatacgaaatgt 615  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| | |||||||| ||| | || |||||| || |||||| |||| |  |||||||    
T  138173 aacaacatcttacatgctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaattgtgaaatgt 138272  T
Q  616 attttgaaa 624  Q
    ||| |||||    
T  138273 attatgaaa 138281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 27355 - 27228
Alignment:
Q  43 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgat 142  Q
    |||| |||||||| |||||||||| ||| |||| ||||| ||||||   |||| ||| ||||||||||||||||||||| ||  ||| | ||||||||      
T  27355 gtgatatagagttgggtgacattggtgatattggccaatcacaatgccacaatgcttctgtttctctctctttcacaagaattatgacattgtgattggc 27256  T
Q  143 caatgtcatcaatgtcacccaactctat 170  Q
    |||| |||  ||||||||||||||||||    
T  27255 caatatcactaatgtcacccaactctat 27228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1033 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1033
Description:

Target: scaffold1033; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 2265 - 2322
Alignment:
Q  92 caatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtc 149  Q
    |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||||    
T  2265 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatgtc 2322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1029 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1029
Description:

Target: scaffold1029; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 2265 - 2322
Alignment:
Q  92 caatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtc 149  Q
    |||| |||||||||||||||||||||||||||| |||| | |||||||||||||||||    
T  2265 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatgtc 2322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 522 - 573
Target Start/End: Complemental strand, 4061 - 4010
Alignment:
Q  522 atcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||||||||||    
T  4061 atcttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaa 4010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 519 - 573
Target Start/End: Original strand, 28798 - 28852
Alignment:
Q  519 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    ||||||||| |||||||||||||||||||||  ||||||||||| ||||||||||    
T  28798 aacatcttatatgctaatatttgtatttataaattagttaaaaaatatggtcaaa 28852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 494 - 567
Target Start/End: Complemental strand, 1661 - 1588
Alignment:
Q  494 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatg 567  Q
    ||||||||| ||| | |||| |||||| ||||||||||||||||||||||||||||  ||| ||||||| ||||    
T  1661 aaatatttattgagacaaatcgaacaatatcttacatgctaatatttgtatttatacattaattaaaaaatatg 1588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 573
Target Start/End: Original strand, 53541 - 53620
Alignment:
Q  494 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 573  Q
    |||||||||  |||| ||||  ||||||||||| |||||||| ||||||| |||||| ||||||||||| |||| |||||    
T  53541 aaatatttatcgaaacaaatcaaacaacatcttgcatgctaaaatttgtaattatatattagttaaaaaatatgatcaaa 53620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 516 - 562
Target Start/End: Original strand, 217018 - 217064
Alignment:
Q  516 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 562  Q
    |||||||||||| ||||||| |||||||||||||| ||| |||||||    
T  217018 aacaacatcttatatgctaacatttgtatttatatattacttaaaaa 217064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 161
Target Start/End: Complemental strand, 5010 - 4909
Alignment:
Q  57 ggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtcatcaatg 156  Q
    ||||| |||| ||| ||||  ||||||||||||| ||   ||| ||||| |||||||||||||||||| || ||| |||||||| || |||||| |||||    
T  5010 ggtgatattggtgatattggtcaattacaatgttaca---cttatgtttgtctctctttcacaagcattgtaatattgtgattggtcgatgtcaccaatg 4914  T
Q  157 tcacc 161  Q
    |||||    
T  4913 tcacc 4909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 63785 - 63867
Alignment:
Q  68 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaatgtca 150  Q
    |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||| | ||||||||  ||||||||    
T  63785 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtca 63867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 2967 - 2919
Alignment:
Q  98 ttgtgtttctctctctttcacaagcatggtgatactgtgattgatcaat 146  Q
    ||||||||||||||||||||||| ||| |||| | |||||||| |||||    
T  2967 ttgtgtttctctctctttcacaaacattgtgacattgtgattggtcaat 2919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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