View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14296_low_15 (Length: 255)
Name: NF14296_low_15
Description: NF14296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14296_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 55257145 - 55256900
Alignment:
| Q |
1 |
ttttgtataactctcttctatctttgccattttggtaaagagtgaacaaagatgatgcattatgtttcctattcaaacacaactgcatagatatgcgtga |
100 |
Q |
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| T |
55257145 |
ttttgtataactctcttctatctttgccattttggtaaagagtgaacaaagatgatgcattatgtttcctattcaaacacaactgcatagatatgcgtga |
55257046 |
T |
|
| Q |
101 |
ttatactttgaaattgtagtgacttcactttaatacaatttattggattgcatcaaccgtctttactatcagttatatagggattagtcttaacctggtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55257045 |
ttatactttgaaattgtagtgacttcactttaatacaatttattggattgcatcaaccgtctttactatcagttatatagggattagtcttaacctggtt |
55256946 |
T |
|
| Q |
201 |
aacgattgcagactcccgagactgcaaattgtatcactagaataat |
246 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
55256945 |
gacaattgcagactcccgagactgcaaattgtatcactagaataat |
55256900 |
T |
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