View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14297_high_18 (Length: 442)

Name: NF14297_high_18
Description: NF14297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14297_high_18
NF14297_high_18
[»] chr6 (40 HSPs)
chr6 (17-425)||(30522293-30522698)
chr6 (174-257)||(25426139-25426222)
chr6 (174-285)||(28641739-28641850)
chr6 (165-319)||(281808-281958)
chr6 (113-257)||(4006622-4006766)
chr6 (174-319)||(27693399-27693540)
chr6 (139-209)||(10452426-10452496)
chr6 (174-263)||(2117372-2117461)
chr6 (222-300)||(4420660-4420734)
chr6 (211-313)||(32171349-32171447)
chr6 (193-258)||(32171455-32171520)
chr6 (165-285)||(2027396-2027516)
chr6 (174-319)||(27595527-27595668)
chr6 (165-252)||(1402956-1403043)
chr6 (222-285)||(34939761-34939824)
chr6 (112-285)||(8010264-8010437)
chr6 (192-258)||(28088239-28088305)
chr6 (176-278)||(31324427-31324529)
chr6 (108-154)||(33818088-33818134)
chr6 (192-257)||(1275136-1275201)
chr6 (139-279)||(6647323-6647461)
chr6 (200-285)||(31624085-31624170)
chr6 (222-308)||(34939530-34939612)
chr6 (230-319)||(2460111-2460196)
chr6 (195-279)||(3168257-3168341)
chr6 (174-285)||(7785734-7785843)
chr6 (200-244)||(9041467-9041511)
chr6 (174-319)||(32386523-32386664)
chr6 (174-241)||(3785734-3785801)
chr6 (214-273)||(17241254-17241313)
chr6 (137-279)||(2514634-2514776)
chr6 (204-258)||(7945901-7945954)
chr6 (144-258)||(33787762-33787876)
chr6 (193-314)||(2023558-2023676)
chr6 (174-279)||(3155145-3155249)
chr6 (212-281)||(5564122-5564191)
chr6 (136-209)||(11340691-11340764)
chr6 (222-308)||(32577957-32578039)
chr6 (213-277)||(27909636-27909700)
chr6 (141-217)||(29274287-29274363)
[»] chr4 (40 HSPs)
chr4 (136-285)||(21157699-21157848)
chr4 (200-276)||(7694009-7694085)
chr4 (140-319)||(2996508-2996683)
chr4 (136-278)||(54325034-54325176)
chr4 (140-251)||(30338615-30338727)
chr4 (174-250)||(30581702-30581778)
chr4 (136-263)||(30207583-30207709)
chr4 (139-258)||(49219073-49219192)
chr4 (138-285)||(23819023-23819169)
chr4 (224-279)||(29467620-29467675)
chr4 (223-314)||(6987706-6987793)
chr4 (176-246)||(24091434-24091504)
chr4 (186-275)||(26747402-26747492)
chr4 (224-285)||(20936219-20936280)
chr4 (144-241)||(35958594-35958691)
chr4 (206-258)||(17975386-17975438)
chr4 (211-263)||(18011877-18011929)
chr4 (113-279)||(21593002-21593173)
chr4 (230-319)||(27123312-27123397)
chr4 (186-258)||(29601025-29601097)
chr4 (136-252)||(32066434-32066548)
chr4 (214-285)||(1965950-1966021)
chr4 (200-255)||(12650304-12650359)
chr4 (175-258)||(18628560-18628643)
chr4 (136-227)||(24443969-24444060)
chr4 (174-285)||(29263339-29263450)
chr4 (165-207)||(20936070-20936112)
chr4 (232-285)||(1137739-1137792)
chr4 (224-285)||(1312860-1312921)
chr4 (222-263)||(19429726-19429767)
chr4 (136-197)||(47970249-47970310)
chr4 (177-258)||(56055723-56055803)
chr4 (222-258)||(5131267-5131303)
chr4 (203-279)||(6978958-6979034)
chr4 (165-285)||(24929453-24929573)
chr4 (142-258)||(27043847-27043963)
chr4 (174-258)||(35064824-35064908)
chr4 (174-258)||(51630080-51630164)
chr4 (165-285)||(52746830-52746950)
chr4 (211-279)||(55547040-55547108)
[»] chr3 (41 HSPs)
chr3 (174-314)||(21574460-21574595)
chr3 (174-310)||(2201097-2201236)
chr3 (176-320)||(25182946-25183087)
chr3 (143-258)||(40122770-40122884)
chr3 (180-258)||(13709840-13709918)
chr3 (192-319)||(14548681-14548804)
chr3 (136-285)||(27290891-27291038)
chr3 (136-258)||(27792803-27792925)
chr3 (137-285)||(20192596-20192744)
chr3 (174-258)||(24887300-24887384)
chr3 (174-285)||(19679318-19679429)
chr3 (206-314)||(37273135-37273239)
chr3 (136-258)||(38462212-38462334)
chr3 (174-279)||(24785174-24785279)
chr3 (174-312)||(36646349-36646483)
chr3 (212-279)||(37825129-37825196)
chr3 (192-285)||(3044249-3044342)
chr3 (165-258)||(32554999-32555091)
chr3 (224-285)||(36101587-36101648)
chr3 (224-285)||(50952352-50952413)
chr3 (121-217)||(1395587-1395683)
chr3 (205-277)||(20669172-20669244)
chr3 (174-258)||(23785224-23785308)
chr3 (136-250)||(24158528-24158641)
chr3 (212-276)||(48048981-48049045)
chr3 (174-257)||(32069119-32069201)
chr3 (200-279)||(33725870-33725949)
chr3 (175-285)||(1217790-1217900)
chr3 (176-319)||(41452494-41452633)
chr3 (174-279)||(1816552-1816657)
chr3 (167-252)||(2719431-2719515)
chr3 (113-154)||(24625378-24625419)
chr3 (174-271)||(25453863-25453960)
chr3 (224-285)||(30923888-30923949)
chr3 (224-285)||(36139897-36139958)
chr3 (137-198)||(53457309-53457370)
chr3 (193-257)||(2923466-2923530)
chr3 (227-279)||(25925764-25925816)
chr3 (217-285)||(36200108-36200176)
chr3 (226-278)||(45432936-45432988)
chr3 (211-279)||(48528562-48528630)
[»] chr1 (51 HSPs)
chr1 (136-314)||(52286609-52286784)
chr1 (136-279)||(17269181-17269324)
chr1 (137-312)||(15579415-15579585)
chr1 (174-279)||(12477283-12477388)
chr1 (186-284)||(4622074-4622172)
chr1 (174-278)||(30257652-30257756)
chr1 (174-314)||(10439655-10439791)
chr1 (222-285)||(35925707-35925770)
chr1 (165-255)||(27738200-27738290)
chr1 (186-252)||(44422680-44422746)
chr1 (224-285)||(4699605-4699666)
chr1 (174-279)||(7218070-7218175)
chr1 (165-319)||(31517700-31517850)
chr1 (174-258)||(15361682-15361766)
chr1 (205-285)||(27140478-27140558)
chr1 (193-285)||(28482223-28482315)
chr1 (165-284)||(35080060-35080180)
chr1 (174-258)||(45205037-45205121)
chr1 (232-320)||(6976952-6977035)
chr1 (174-253)||(48830098-48830177)
chr1 (200-258)||(4700083-4700141)
chr1 (168-250)||(5150900-5150982)
chr1 (174-268)||(9656619-9656713)
chr1 (137-285)||(26184683-26184828)
chr1 (174-279)||(10199404-10199509)
chr1 (200-277)||(14629964-14630041)
chr1 (138-250)||(30259511-30259624)
chr1 (165-258)||(34179889-34179982)
chr1 (134-279)||(45999284-45999429)
chr1 (174-258)||(16322818-16322902)
chr1 (212-251)||(3924631-3924670)
chr1 (230-285)||(6292518-6292573)
chr1 (166-285)||(7262508-7262627)
chr1 (223-258)||(24146297-24146332)
chr1 (244-310)||(4481969-4482031)
chr1 (165-258)||(11211078-11211171)
chr1 (232-285)||(11639406-11639459)
chr1 (223-305)||(15437981-15438059)
chr1 (270-311)||(17009550-17009591)
chr1 (176-249)||(26630434-26630507)
chr1 (200-285)||(37842345-37842430)
chr1 (142-285)||(3887621-3887765)
chr1 (142-198)||(6976885-6976941)
chr1 (174-250)||(15566661-15566737)
chr1 (174-319)||(15581223-15581364)
chr1 (174-299)||(17628568-17628689)
chr1 (194-278)||(25479570-25479654)
chr1 (175-279)||(27887114-27887218)
chr1 (192-285)||(28689442-28689537)
chr1 (222-278)||(28935873-28935929)
chr1 (136-276)||(44031998-44032138)
[»] chr7 (39 HSPs)
chr7 (137-319)||(28165023-28165201)
chr7 (174-314)||(48157085-48157221)
chr7 (187-321)||(33645918-33646049)
chr7 (163-273)||(38010672-38010782)
chr7 (243-314)||(36598321-36598388)
chr7 (174-268)||(40688993-40689087)
chr7 (177-319)||(44151436-44151578)
chr7 (136-285)||(3610730-3610879)
chr7 (137-258)||(27378845-27378965)
chr7 (165-249)||(17989049-17989133)
chr7 (168-252)||(23721469-23721553)
chr7 (200-252)||(30812143-30812195)
chr7 (174-285)||(12110329-12110440)
chr7 (186-285)||(28702731-28702829)
chr7 (199-285)||(44615094-44615180)
chr7 (174-275)||(24363601-24363702)
chr7 (175-256)||(47177606-47177687)
chr7 (136-252)||(27548194-27548310)
chr7 (137-217)||(31002693-31002773)
chr7 (198-258)||(46056027-46056087)
chr7 (165-244)||(5006540-5006619)
chr7 (211-278)||(9423591-9423658)
chr7 (214-285)||(12234879-12234950)
chr7 (230-314)||(22387861-22387941)
chr7 (174-249)||(29363487-29363562)
chr7 (285-320)||(39591457-39591492)
chr7 (212-263)||(40439061-40439112)
chr7 (136-319)||(4966087-4966266)
chr7 (136-229)||(5369737-5369828)
chr7 (233-279)||(27517852-27517898)
chr7 (174-244)||(28340427-28340497)
chr7 (248-319)||(36537951-36538018)
chr7 (212-257)||(39505963-39506008)
chr7 (205-249)||(3968783-3968827)
chr7 (136-252)||(11208380-11208496)
chr7 (282-314)||(17944862-17944894)
chr7 (205-285)||(18749807-18749887)
chr7 (165-249)||(22759146-22759230)
chr7 (174-257)||(46825067-46825151)
[»] chr2 (48 HSPs)
chr2 (174-314)||(33942119-33942257)
chr2 (165-284)||(1939323-1939442)
chr2 (163-273)||(22681187-22681297)
chr2 (165-315)||(1741996-1742142)
chr2 (136-252)||(17952723-17952840)
chr2 (137-277)||(18962035-18962176)
chr2 (174-279)||(35485886-35485991)
chr2 (174-279)||(44458334-44458439)
chr2 (136-244)||(10143103-10143211)
chr2 (188-276)||(10198479-10198567)
chr2 (174-278)||(43173191-43173295)
chr2 (230-285)||(27237883-27237938)
chr2 (142-285)||(43985146-43985289)
chr2 (136-311)||(9478230-9478401)
chr2 (174-258)||(7103499-7103584)
chr2 (165-242)||(37292380-37292457)
chr2 (173-253)||(6167305-6167385)
chr2 (174-285)||(29316765-29316876)
chr2 (222-309)||(15120200-15120283)
chr2 (224-285)||(41817187-41817248)
chr2 (177-250)||(43205281-43205354)
chr2 (211-263)||(3067391-3067443)
chr2 (206-258)||(3078657-3078709)
chr2 (136-228)||(3673738-3673830)
chr2 (141-285)||(5133708-5133852)
chr2 (165-257)||(11513858-11513950)
chr2 (139-279)||(12215741-12215881)
chr2 (136-244)||(28803537-28803645)
chr2 (222-319)||(34651996-34652089)
chr2 (238-319)||(41809205-41809282)
chr2 (202-285)||(32821806-32821889)
chr2 (174-285)||(33256709-33256820)
chr2 (174-249)||(43141840-43141915)
chr2 (174-285)||(44438829-44438940)
chr2 (191-285)||(18179230-18179324)
chr2 (149-227)||(44439408-44439486)
chr2 (232-285)||(1647263-1647316)
chr2 (174-279)||(6993720-6993825)
chr2 (144-285)||(25790065-25790206)
chr2 (225-278)||(31228834-31228887)
chr2 (233-285)||(8820282-8820334)
chr2 (135-219)||(25609726-25609810)
chr2 (136-208)||(28902008-28902080)
chr2 (195-255)||(32848898-32848958)
chr2 (174-250)||(36863650-36863726)
chr2 (174-258)||(42817393-42817477)
chr2 (211-263)||(43259840-43259892)
chr2 (200-256)||(44238053-44238109)
[»] chr8 (64 HSPs)
chr8 (136-258)||(28769356-28769478)
chr8 (137-285)||(29973013-29973162)
chr8 (136-285)||(39551199-39551348)
chr8 (137-258)||(4558730-4558851)
chr8 (174-312)||(30191108-30191242)
chr8 (211-279)||(20672756-20672824)
chr8 (174-285)||(42215296-42215407)
chr8 (193-263)||(31705073-31705143)
chr8 (136-258)||(38036129-38036251)
chr8 (205-319)||(11569417-11569527)
chr8 (165-258)||(42370378-42370471)
chr8 (179-275)||(10075551-10075647)
chr8 (225-285)||(41606893-41606953)
chr8 (174-257)||(2093248-2093331)
chr8 (174-257)||(6864477-6864560)
chr8 (116-279)||(11795003-11795166)
chr8 (174-285)||(29262864-29262975)
chr8 (137-244)||(34770824-34770931)
chr8 (191-250)||(44865589-44865648)
chr8 (215-285)||(3254235-3254305)
chr8 (205-312)||(5069697-5069800)
chr8 (136-258)||(11188172-11188294)
chr8 (174-247)||(9836882-9836955)
chr8 (174-279)||(12361161-12361266)
chr8 (137-250)||(13652147-13652260)
chr8 (137-250)||(13710790-13710903)
chr8 (136-276)||(26056016-26056157)
chr8 (205-258)||(30277262-30277315)
chr8 (112-209)||(36337966-36338063)
chr8 (116-209)||(42597312-42597405)
chr8 (241-285)||(926511-926555)
chr8 (174-250)||(6509328-6509404)
chr8 (174-258)||(7918790-7918874)
chr8 (223-279)||(25869262-25869318)
chr8 (227-319)||(26410301-26410390)
chr8 (136-263)||(26716450-26716575)
chr8 (201-285)||(43504747-43504831)
chr8 (202-285)||(11183542-11183625)
chr8 (174-257)||(27728039-27728122)
chr8 (136-227)||(35869768-35869859)
chr8 (192-258)||(7645965-7646031)
chr8 (222-313)||(7918412-7918499)
chr8 (200-258)||(8062324-8062382)
chr8 (165-279)||(21653041-21653155)
chr8 (222-308)||(29973168-29973251)
chr8 (200-314)||(30987956-30988067)
chr8 (138-240)||(31884527-31884629)
chr8 (212-258)||(39881769-39881815)
chr8 (233-278)||(2235653-2235698)
chr8 (222-279)||(2458562-2458619)
chr8 (220-285)||(11185236-11185301)
chr8 (137-198)||(12224976-12225037)
chr8 (176-257)||(30013189-30013270)
chr8 (246-319)||(2487968-2488037)
chr8 (227-279)||(2492958-2493010)
chr8 (200-256)||(5227530-5227586)
chr8 (283-319)||(7853686-7853722)
chr8 (144-208)||(13410262-13410326)
chr8 (287-319)||(21130690-21130722)
chr8 (136-196)||(26215427-26215487)
chr8 (187-251)||(29169121-29169185)
chr8 (233-310)||(31875564-31875637)
chr8 (174-278)||(34849072-34849176)
chr8 (192-248)||(43709260-43709316)
[»] chr5 (48 HSPs)
chr5 (165-314)||(14295466-14295611)
chr5 (122-209)||(35135728-35135815)
chr5 (214-314)||(2468440-2468537)
chr5 (212-319)||(37611175-37611278)
chr5 (212-319)||(37787905-37788008)
chr5 (136-285)||(39105395-39105545)
chr5 (141-258)||(16889671-16889788)
chr5 (176-285)||(17368647-17368756)
chr5 (192-314)||(37526164-37526282)
chr5 (192-314)||(37588325-37588443)
chr5 (175-279)||(17258879-17258983)
chr5 (142-307)||(32172590-32172751)
chr5 (186-285)||(36542272-36542371)
chr5 (136-241)||(3951548-3951651)
chr5 (136-257)||(29588811-29588931)
chr5 (165-310)||(28586735-28586876)
chr5 (204-252)||(29844970-29845018)
chr5 (211-279)||(36774703-36774771)
chr5 (175-285)||(41957441-41957551)
chr5 (112-319)||(4855605-4855805)
chr5 (190-251)||(32408616-32408677)
chr5 (174-312)||(35960383-35960516)
chr5 (190-258)||(6183429-6183497)
chr5 (174-250)||(26516369-26516445)
chr5 (225-285)||(28413274-28413334)
chr5 (200-255)||(29201528-29201583)
chr5 (174-249)||(30217051-30217126)
chr5 (211-315)||(35095750-35095850)
chr5 (165-244)||(38047886-38047965)
chr5 (231-285)||(499721-499775)
chr5 (136-285)||(9202737-9202887)
chr5 (200-258)||(18853006-18853064)
chr5 (165-263)||(35550909-35551006)
chr5 (211-277)||(36638753-36638819)
chr5 (168-214)||(39941804-39941850)
chr5 (136-285)||(40205064-40205211)
chr5 (200-285)||(2568653-2568738)
chr5 (212-285)||(2880537-2880610)
chr5 (204-310)||(4619706-4619808)
chr5 (165-218)||(38766900-38766953)
chr5 (168-209)||(39941694-39941735)
chr5 (229-285)||(1899178-1899234)
chr5 (138-198)||(7096204-7096264)
chr5 (174-258)||(10272448-10272532)
chr5 (195-239)||(10391331-10391375)
chr5 (136-263)||(16944995-16945120)
chr5 (192-252)||(35553211-35553271)
chr5 (165-217)||(39750103-39750155)
[»] scaffold0275 (1 HSPs)
scaffold0275 (136-273)||(2762-2899)
[»] scaffold0590 (1 HSPs)
scaffold0590 (136-209)||(1140-1213)
[»] scaffold0608 (1 HSPs)
scaffold0608 (244-310)||(9606-9668)
[»] scaffold0584 (1 HSPs)
scaffold0584 (177-258)||(1350-1430)
[»] scaffold0549 (2 HSPs)
scaffold0549 (136-209)||(1790-1863)
scaffold0549 (136-209)||(3880-3953)
[»] scaffold0446 (1 HSPs)
scaffold0446 (177-258)||(5476-5556)
[»] scaffold0091 (1 HSPs)
scaffold0091 (200-256)||(6947-7003)


Alignment Details
Target: chr6 (Bit Score: 375; Significance: 0; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 375; E-Value: 0
Query Start/End: Original strand, 17 - 425
Target Start/End: Complemental strand, 30522698 - 30522293
Alignment:
Q  17 agatacaatcatcagaggagctttttaccatcctatatgctgtaatactcctcatttcaactctcaaatatttgatctaagccaagtttaaatatacaac 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30522698 agatacaatcatcagaggagctttttaccatcctatatgctgtaatactcctcatttcaactctcaaatatttgatctaagccaagtttagatatacaac 30522599  T
Q  117 ttaattaagtgcttaaggcataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgttt 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  30522598 ttaattaagtgcttaaggcataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatataagctataatctgctt 30522499  T
Q  217 ttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtctcata 316  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||    
T  30522498 ttattagctatcctggagagtttatgcaaataagctaacaacggcttttgaacatgtcataagatgtttgtttc---aagctctctcaaacagtctcata 30522402  T
Q  317 agtttacggtgaattgaattcaattgtgtgtgatgatttcagggaattgtagcatcaggtattgtgatatctctccaaacatggtgtattcaaaagggtg 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30522401 agtttacggtgaattgaattcaattgtgtgtgatgatttcagggaattgtagcatcaggtattgtgatatctctccaaacatggtgtattcaaaagggtg 30522302  T
Q  417 gtcctgtct 425  Q
    |||||||||    
T  30522301 gtcctgtct 30522293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 25426139 - 25426222
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaa 257  Q
    ||||||||||| ||| |  ||||||||||||||||| || ||||||| |||||||||||||| ||||| |||||||| ||||||    
T  25426139 taaaataaagtcaaattgctttcatgtaagctataagctatttttataagctatcctggagaatttatagaaataagttaaaaa 25426222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 28641850 - 28641739
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| || || ||||  | |||||||||| ||||||| | ||||||| ||| |||| ||||| ||||||||||||||| |||| |||||||||    
T  28641850 taaaataaagtcaatctgttttagtttaagctataaactgttttcaatagctattctgcagagcttatgaaaataagctaaaaacagcttatgaacatgt 28641751  T
Q  274 cataagatgttt 285  Q
     ||||| |||||    
T  28641750 tataagctgttt 28641739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 319
Target Start/End: Complemental strand, 281958 - 281808
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttt 264  Q
    |||||||  ||||||||||| ||  | ||||||| |||||||||| |||| || || ||||||||| ||||| | ||||||||||||| |||||  |||     
T  281958 aacaaaagataaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcctagagagctcatggaaataagctgaaaacaactta 281859  T
Q  265 tgaacatgtcataagatgtttgtttccataagctctctcaaacagtctcataagt 319  Q
    |  ||||||||||||    ||| |||||| ||||||| |||||||||||| ||||    
T  281858 tagacatgtcataag----ttgcttccattagctctcccaaacagtctcacaagt 281808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 4006622 - 4006766
Alignment:
Q  113 caacttaattaagtgcttaaggcataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatct 212  Q
    ||||||||||||   ||||  ||||||||||||||| |||||||| ||| | ||||||   ||||||||||| ||| | |||| || ||||||||||  |    
T  4006622 caacttaattaatcccttatagcataagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagtt 4006721  T
Q  213 gtttttattagctatcctggagagtttatggaaataagctaaaaa 257  Q
    ||||| || ||||||||  ||||| ||||| ||||||||| ||||    
T  4006722 gttttcataagctatccctgagaggttatgaaaataagctgaaaa 4006766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 319
Target Start/End: Complemental strand, 27693540 - 27693399
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| ||| ||||||||| |||||| ||| ||| ||| ||| || ||||| ||||||||| |||||| |  | ||||  |||| |||||||||    
T  27693540 taaaataaagtcaaattattttcatataagctgtaagctgatttcatttgcaatcctagagagtttacggaaattacttgaaaatagcttatgaacatgt 27693441  T
Q  274 cataagatgtttgtttccataagctctctcaaacagtctcataagt 319  Q
    ||||||    ||||||||||||  ||||||||| ||||||| ||||    
T  27693440 cataag----ttgtttccataaattctctcaaatagtctcacaagt 27693399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 139 - 209
Target Start/End: Complemental strand, 10452496 - 10452426
Alignment:
Q  139 agtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataa 209  Q
    |||||||||||||||| || ||| | |||||||| ||||||||| | ||||||||||||| ||||||||||    
T  10452496 agtgcttatgtataagctatttctataacaaaatataaaataaaatcaaactattttcatataagctataa 10452426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 2117372 - 2117461
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggctt 263  Q
    ||||| ||||| ||||||||||||| ||| ||||||  |||||| || || |||||| ||||| |||| |||||||||||||||| ||||    
T  2117372 taaaacaaagtcaaactattttcatataatctataagttgttttcataagttatcctagagagcttattgaaataagctaaaaacagctt 2117461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 4420660 - 4420734
Alignment:
Q  222 agctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctct 300  Q
    ||||||| ||||||| ||||||||||||||| ||||| |||| ||||||||||||||    |||||||| |||||||||    
T  4420660 agctatcttggagagcttatggaaataagctgaaaacagcttatgaacatgtcataa----tttgtttctataagctct 4420734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 211 - 313
Target Start/End: Complemental strand, 32171447 - 32171349
Alignment:
Q  211 ctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagt 310  Q
    ||||||| ||||| ||||||||| || ||||||||||||||| ||||  |||| || || |||||||||     ||||| ||||||||||||||||||||    
T  32171447 ctgttttcattagttatcctggatagcttatggaaataagctgaaaatagcttctggacttgtcataag----ctgttttcataagctctctcaaacagt 32171352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 32171455 - 32171520
Alignment:
Q  193 tttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    |||||| ||||||||||||||||||  | || |||||||||||| ||||||||||||||| |||||    
T  32171455 tttcatataagctataatctgttttagtaaggtatcctggagagcttatggaaataagctgaaaac 32171520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 2027516 - 2027396
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttt 264  Q
    |||||||  ||||||||||| ||||||||||||| ||| |||||| ||||| | || ||||| | || ||||||||   ||||||||| ||||| ||||     
T  2027516 aacaaaagataaaataaagtcaaactattttcatataacctataagctgttctcataagctagcatgtagagtttaaataaataagctgaaaacagctta 2027417  T
Q  265 tgaacatgtcataagatgttt 285  Q
    || | |||||||||| |||||    
T  2027416 tggaaatgtcataagctgttt 2027396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 319
Target Start/End: Complemental strand, 27595668 - 27595527
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| ||| ||||||||| |||||| |||  |  ||| ||| || ||||| ||||||||| |||||| |  | ||||  |||| |||||||||    
T  27595668 taaaataaagtcaaattattttcatataagctgtaagttaatttcatttgcaatcctagagagtttacggaaattacttgaaaatagcttatgaacatgt 27595569  T
Q  274 cataagatgtttgtttccataagctctctcaaacagtctcataagt 319  Q
    ||||||    ||||||||||||  |||| |||||||||||||||||    
T  27595568 cataag----ttgtttccataaattctcccaaacagtctcataagt 27595527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 1402956 - 1403043
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagct 252  Q
    |||||||  ||||||||||| ||||||||||||| ||||||||||  |||||| || ||||||| ||||||  |||| ||||| ||||    
T  1402956 aacaaaagataaaataaagttaaactattttcatataagctataaattgttttcataagctatcatggagatcttatagaaattagct 1403043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 34939761 - 34939824
Alignment:
Q  222 agctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||||||||||||||||||||||||||||| |||||   || || |||||||||||| |||||    
T  34939761 agctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcataagctgttt 34939824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 285
Target Start/End: Original strand, 8010264 - 8010437
Alignment:
Q  112 acaacttaattaagtgcttaaggcataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgt-aagctataat 210  Q
    |||||||||||||||| |||    ||||||||||| ||||||| || ||| | ||||| | | |||||||||| || ||| |||||| | ||| |||||     
T  8010264 acaacttaattaagtgtttatcatataagtgcttaggtataagctatttctataacaacaat-aaaataaagtcaatctactttcattttaagttataag 8010362  T
Q  211 ctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||||| || || |||||||||||  |||| ||||||| || ||||  |||| |||||||||||| || |||||    
T  8010363 ctgttttaataagttatcctggagaacttatagaaataaactgaaaatagcttatgaacatgtcatgagttgttt 8010437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 28088305 - 28088239
Alignment:
Q  192 ttttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    ||||||| |||||||||| ||||||| || ||||||| ||||||| | ||||||||||||| |||||    
T  28088305 ttttcatataagctataaactgttttcataagctatcatggagagctcatggaaataagctcaaaac 28088239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 278
Target Start/End: Original strand, 31324427 - 31324529
Alignment:
Q  176 aaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtca 275  Q
    |||||| || |||||||||||||||||||||||| |||  || || ||||||| || |||| ||||  |||||||   ||||| | ||||||||||||||    
T  31324427 aaataaggttaaactattttcatgtaagctataagctgcattcataagctatcatgaagagcttattaaaataagtctaaaacagtttttgaacatgtca 31324526  T
Q  276 taa 278  Q
    |||    
T  31324527 taa 31324529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 154
Target Start/End: Complemental strand, 33818134 - 33818088
Alignment:
Q  108 atatacaacttaattaagtgcttaaggcataagtgcttatgtataag 154  Q
    |||||||||||||||||||| |||  |||||||||||||||||||||    
T  33818134 atatacaacttaattaagtgtttatagcataagtgcttatgtataag 33818088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 257
Target Start/End: Original strand, 1275136 - 1275201
Alignment:
Q  192 ttttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaa 257  Q
    ||||||| |||||||||| ||||||| ||  | |||||||||||| ||||||||||||||| ||||    
T  1275136 ttttcatataagctataagctgttttcatatgttatcctggagagcttatggaaataagctgaaaa 1275201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 279
Target Start/End: Original strand, 6647323 - 6647461
Alignment:
Q  139 agtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtt 238  Q
    |||||||||||||||| || ||| | |||||||  |||  |||||| ||| || ||| || || | ||||||||||||| || ||||||| | ||||| |    
T  6647323 agtgcttatgtataagttatttctataacaaaaaataa--taaagtcaaattactttaatataggttataatctgttttcataagctatcttagagagct 6647420  T
Q  239 tatggaaataagctaaaaacggcttttgaacatgtcataag 279  Q
    |||| ||||||| | |||||  ||| |||||||||||||||    
T  6647421 tatgaaaataagttgaaaacatcttatgaacatgtcataag 6647461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 31624085 - 31624170
Alignment:
Q  200 taagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    |||||||||| ||||||| ||  |||||| ||||||  ||||| ||||||| | ||||| |||| ||||||||||||||| |||||    
T  31624085 taagctataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcataagctgttt 31624170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 308
Target Start/End: Original strand, 34939530 - 34939612
Alignment:
Q  222 agctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaaca 308  Q
    |||||||||| |||| ||||||||||||||| |||||  |||  | || |||||||||    |||||||||||||||||||||||||    
T  34939530 agctatcctgaagaggttatggaaataagctgaaaacaacttacggacgtgtcataag----ttgtttccataagctctctcaaaca 34939612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 319
Target Start/End: Complemental strand, 2460196 - 2460111
Alignment:
Q  230 tggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtctcataagt 319  Q
    ||||||| ||||||||||||| | |||||  |||    ||||||||||||    ||||||||||||||||||||||||||||||| ||||    
T  2460196 tggagagcttatggaaataagttgaaaacaacttaaagacatgtcataag----ttgtttccataagctctctcaaacagtctcacaagt 2460111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 279
Target Start/End: Complemental strand, 3168341 - 3168257
Alignment:
Q  195 tcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataag 279  Q
    |||| |||||||||| |||||||  | ||||||||||||||| ||| ||||||||||| ||||| ||   || ||||||||||||    
T  3168341 tcatataagctataaactgttttcttaagctatcctggagagcttaaggaaataagctgaaaacagccgatggacatgtcataag 3168257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 7785843 - 7785734
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| ||||| ||||||| ||||||||||  ||| || ||  |||||  ||||||| ||||||||||||||| |||||  ||| |  ||||||    
T  7785843 taaaataaagtcaaactcttttcatataagctataaattgtcttcat--gctattttggagagcttatggaaataagctgaaaacaacttatagacatgt 7785746  T
Q  274 cataagatgttt 285  Q
    |||||| |||||    
T  7785745 cataagctgttt 7785734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 244
Target Start/End: Complemental strand, 9041511 - 9041467
Alignment:
Q  200 taagctataatctgtttttattagctatcctggagagtttatgga 244  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||    
T  9041511 taagctataagctgtttttattagctatcgtggagagcttatgga 9041467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 319
Target Start/End: Complemental strand, 32386664 - 32386523
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    |||||||| || ||| | ||||||| |||| ||||   |||||| ||||| |||||||||||| ||||| ||||||||| |||||   || || ||||||    
T  32386664 taaaataaggtcaaattgttttcatataaggtatacgttgttttcattagttatcctggagagcttatgaaaataagctgaaaacaagttgtggacatgt 32386565  T
Q  274 cataagatgtttgtttccataagctctctcaaacagtctcataagt 319  Q
     ||||||    | |||||||||||||| |||||| |||||| ||||    
T  32386564 tataaga----tatttccataagctctttcaaacggtctcacaagt 32386523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 3785801 - 3785734
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttat 241  Q
    ||||||||||| ||||| ||||| | |||||||||| |||||||| | |||||| |||||||| ||||    
T  3785801 taaaataaagttaaactgttttcgtataagctataagctgtttttgtaagctattctggagagcttat 3785734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 17241313 - 17241254
Alignment:
Q  214 tttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    |||| |||||||||| ||||||||||||||||||||| | |||||  ||| |||||||||    
T  17241313 ttttcattagctatcttggagagtttatggaaataagttgaaaacaacttatgaacatgt 17241254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 279
Target Start/End: Original strand, 2514634 - 2514776
Alignment:
Q  137 taagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagag 236  Q
    |||||||||||||||||| || ||| | || ||||  ||||||||||| |||||| ||| || | ||||||||  | |||| || |||| |||||||||     
T  2514634 taagtgcttatgtataagctatttctataataaaagataaaataaagtcaaactaattttatatgagctataagttattttcataagctgtcctggagat 2514733  T
Q  237 tttatggaaataagctaaaaacggcttttgaacatgtcataag 279  Q
     || ||||| ||||   ||||| |||| |||| ||||||||||    
T  2514734 cttttggaagtaagacgaaaacagcttatgaatatgtcataag 2514776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 258
Target Start/End: Complemental strand, 7945954 - 7945901
Alignment:
Q  204 ctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    |||||| ||||||| || ||||||||||||||| ||||||||||||||| |||||    
T  7945954 ctataacctgttttcat-agctatcctggagagcttatggaaataagcttaaaac 7945901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 258
Target Start/End: Complemental strand, 33787876 - 33787762
Alignment:
Q  144 ttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatgg 243  Q
    ||||||||||  || ||| | |||||||| ||||| ||||| ||| |  |||||| |||| ||||| ||||||| || || |||| ||||||| ||||||    
T  33787876 ttatgtataaactatttctataacaaaatataaaacaaagtcaaattgatttcatataagttataagctgttttcataagttatcttggagagcttatgg 33787777  T
Q  244 aaataagctaaaaac 258  Q
    ||||| ||| |||||    
T  33787776 aaataggctgaaaac 33787762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 314
Target Start/End: Original strand, 2023558 - 2023676
Alignment:
Q  193 tttcatgtaagctataatctgtttt-tattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttcc 291  Q
    |||||| |||||||||| || |||| ||| | || || ||||||| |||| |||||||||| ||||| | || ||| || ||||||||    ||||||||    
T  2023558 tttcatataagctataagctattttctataaactttcttggagagcttatagaaataagctgaaaacagtttgtgatcaggtcataag----ttgtttcc 2023653  T
Q  292 ataagctctctcaaacagtctca 314  Q
    | ||||||||| |||||||||||    
T  2023654 acaagctctctgaaacagtctca 2023676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 3155145 - 3155249
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||| ||||| ||||| ||| ||| ||| |||||| || |||| || || |||||||||||| | ||||||||||||| ||||| |||| |  ||||||    
T  3155145 taaaacaaagtcaaactgtttccatataacctataagctattttcataagatatcctggagagct-atggaaataagctgaaaacagcttatagacatgt 3155243  T
Q  274 cataag 279  Q
    ||||||    
T  3155244 cataag 3155249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 281
Target Start/End: Complemental strand, 5564191 - 5564122
Alignment:
Q  212 tgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagat 281  Q
    |||||| || |||| || || |||||||||| ||||||||| ||||| ||||| | ||||||||||||||    
T  5564191 tgttttcataagctgtcttgaagagtttatgcaaataagctgaaaacagctttcggacatgtcataagat 5564122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 209
Target Start/End: Complemental strand, 11340764 - 11340691
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataa 209  Q
    |||||||||||| ||||||||| ||| | |||||||  ||||||||||| ||  ||||||||| || |||||||    
T  11340764 ataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctataa 11340691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 308
Target Start/End: Complemental strand, 32578039 - 32577957
Alignment:
Q  222 agctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaaca 308  Q
    |||||||||| ||||  |||||||||||||| ||||| |||   | ||||||||||||    |||||| ||||||||||||||||||    
T  32578039 agctatcctgaagagcatatggaaataagctgaaaacagctcaaggacatgtcataag----ttgttttcataagctctctcaaaca 32577957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 277
Target Start/End: Complemental strand, 27909700 - 27909636
Alignment:
Q  213 gtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcata 277  Q
    |||||||| |||| | |||||||| ||||||||||||||| |||||  ||| || ||||||||||    
T  27909700 gtttttataagctttactggagagcttatggaaataagctgaaaacaacttatggacatgtcata 27909636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 29274363 - 29274287
Alignment:
Q  141 tgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttt 217  Q
    |||||||||||||| || ||| | | |||||  ||||||||||| ||| | ||||||| |||||||||| |||||||    
T  29274363 tgcttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgtttt 29274287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 136 - 285
Target Start/End: Original strand, 21157699 - 21157848
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    |||||||||||||||| || || ||  | |||||| | |||| |||||| ||||| ||||||||||||||||||  |||||| ||  ||||||||| |||    
T  21157699 ataagtgcttatgtatcagctattttgataacaaagtataaactaaagtcaaactgttttcatgtaagctataagatgttttcatatgctatcctgaaga 21157798  T
Q  236 gtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    | ||||||||||||||||||||| ||||||| | |||||||||| |||||    
T  21157799 gcttatggaaataagctaaaaacagcttttgtaaatgtcataagctgttt 21157848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 276
Target Start/End: Complemental strand, 7694085 - 7694009
Alignment:
Q  200 taagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcat 276  Q
    |||||||||| ||||||| || || |||||||||||||||||||||||||||| |||||  ||| ||||||||||||    
T  7694085 taagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacatgtcat 7694009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 140 - 319
Target Start/End: Original strand, 2996508 - 2996683
Alignment:
Q  140 gtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagttt 239  Q
    ||||||||| ||||| |||||| | |||| ||  ||||||| ||| ||| | |||| || |||| |||||  |||||| || ||||||| |||||||  |    
T  2996508 gtgcttatgaataagctacttcgataacataagataaaatacagtcaaattgtttttatataagttataagttgttttcataagctatcttggagagcgt 2996607  T
Q  240 atggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtctcataagt 319  Q
    ||| ||||||| | ||||  |||| || ||||||||||||    |||||| |||||||||||||||||||||||| ||||    
T  2996608 atgaaaataagttgaaaaaagcttatggacatgtcataag----ttgttttcataagctctctcaaacagtctcaaaagt 2996683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 278
Target Start/End: Complemental strand, 54325176 - 54325034
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    |||||||||| |||||||  || ||| |  ||||||  ||||||||||| ||||| ||||||| |||||||||| || |||| |  ||||||| ||||||    
T  54325176 ataagtgcttgtgtataaactatttctattacaaaagataaaataaagtcaaactgttttcatataagctataagctattttcaaaagctatcatggaga 54325077  T
Q  236 gtttatggaaataagctaaaaacggcttttgaacatgtcataa 278  Q
    ||||||||| |||| || ||||| |||| || |||| ||||||    
T  54325076 gtttatggagataaactgaaaacagcttatggacatatcataa 54325034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 30338727 - 30338615
Alignment:
Q  140 gtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgttttt-attagctatcctggagagtt 238  Q
    ||||||||||||||  || ||| | |||||||  || |||||||| ||||| ||||||| |||||||||| |||||||| || |||| || |||||||||    
T  30338727 gtgcttatgtataaactatttctataacaaaagatagaataaagttaaactgttttcatataagctataaactgtttttcataagctctcttggagagtt 30338628  T
Q  239 tatggaaataagc 251  Q
    |||| ||||||||    
T  30338627 tatgaaaataagc 30338615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 30581778 - 30581702
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataag 250  Q
    |||||| |||| ||||||||||| | |||||||||| ||||||| || || |||| |||||||||||||||||||||    
T  30581778 taaaatgaagtcaaactattttcgtataagctataagctgttttaataagttatcttggagagtttatggaaataag 30581702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 263
Target Start/End: Complemental strand, 30207709 - 30207583
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||||||||||||||| | || ||| | |||||||  ||||||||| | ||||| ||||||| ||||||||||  |||||| || ||||| | | ||||    
T  30207709 ataagtgcttatgtatatgttagttctataacaaaaaataaaataaa-tcaaactgttttcatataagctataagttgttttcataagctaccttagaga 30207611  T
Q  236 gtttatggaaataagctaaaaacggctt 263  Q
    | ||||||||||||||| ||||| ||||    
T  30207610 gattatggaaataagctgaaaacagctt 30207583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 258
Target Start/End: Original strand, 49219073 - 49219192
Alignment:
Q  139 agtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtt 238  Q
    |||| ||| ||||||| || ||| | |||||||| ||||||||||| ||| ||||||||| ||||||||||  |||||| || | ||||| |  |||| |    
T  49219073 agtggttaggtataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaactatcttaaagagat 49219172  T
Q  239 tatggaaataagctaaaaac 258  Q
    |||||||||||||| |||||    
T  49219173 tatggaaataagctgaaaac 49219192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 285
Target Start/End: Original strand, 23819023 - 23819169
Alignment:
Q  138 aagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagt 237  Q
    ||||| ||||||||||| || ||||| |||||| | ||||||  ||| ||||| ||||||| |||| |||||  |||||| || ||||||| || ||||     
T  23819023 aagtgtttatgtataagttatttccataacaaa-tataaaatgtagtcaaactgttttcatataagttataacatgttttcataagctatcttgaagagc 23819121  T
Q  238 ttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    |||| |||||||| | |||||  ||| || |||||||||||| |||||    
T  23819122 ttatagaaataagatgaaaacaacttatggacatgtcataagctgttt 23819169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 29467675 - 29467620
Alignment:
Q  224 ctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataag 279  Q
    ||||||| ||||||||||||||||||||| ||||| |||| || ||||||||||||    
T  29467675 ctatcctagagagtttatggaaataagctgaaaacagcttatggacatgtcataag 29467620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 6987793 - 6987706
Alignment:
Q  223 gctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtctca 314  Q
    |||||||||||||| ||||||||||||| | ||||  | || || ||||||||||||    |||| ||||||||||||| ||||||||||||    
T  6987793 gctatcctggagagcttatggaaataagttgaaaatagtttatggacatgtcataag----ttgtatccataagctctcccaaacagtctca 6987706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 24091434 - 24091504
Alignment:
Q  176 aaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaa 246  Q
    ||||||||| ||| ||||||||| |||||||||| ||||||| || || |||||||||  |||||||||||    
T  24091434 aaataaagtcaaattattttcatataagctataaactgttttcataagttatcctggaaggtttatggaaa 24091504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 26747492 - 26747402
Alignment:
Q  186 aaactattttcatgtaagct-ataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtca 275  Q
    ||||||||||||| |||||| ||||  |||||| ||||| ||||||  |||  ||||||||||||||||||||  |||| |||||||||||    
T  26747492 aaactattttcatataagcttataagttgttttcattagttatcctaaagaacttatggaaataagctaaaaaaagcttatgaacatgtca 26747402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 20936280 - 20936219
Alignment:
Q  224 ctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||||||||||| ||||||||||||| | ||||| |||| ||||||| ||||||| |||||    
T  20936280 ctatcctggagagattatggaaataaggtgaaaacagcttatgaacatatcataagttgttt 20936219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 35958594 - 35958691
Alignment:
Q  144 ttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttat 241  Q
    ||||||||||| || ||| | |||| || |||||||||||| ||| |  ||| || ||||||| || ||||||| || ||||||||||||||||||||    
T  35958594 ttatgtataagctatttctataacataagttaaaataaagtcaaatttgttttatataagctagaagctgttttcataagctatcctggagagtttat 35958691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 17975438 - 17975386
Alignment:
Q  206 ataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    |||| |||||||||| ||||||| ||||||| || ||||||||||||||||||    
T  17975438 ataagctgtttttataagctatcttggagagcttctggaaataagctaaaaac 17975386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 18011877 - 18011929
Alignment:
Q  211 ctgtttttattagctatcctggagagtttatggaaataagctaaaaacggctt 263  Q
    ||||||| || ||||||| || |||||||||| ||||||||||||||||||||    
T  18011877 ctgttttcataagctatcttgaagagtttatgaaaataagctaaaaacggctt 18011929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 279
Target Start/End: Complemental strand, 21593173 - 21593002
Alignment:
Q  113 caacttaattaagtgcttaaggcataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataa-tc 211  Q
    ||||| ||||| |||||||  || |||||||||||||||||  || ||| | ||| |||  ||||||||||| || |||||||||| |||||||||| |     
T  21593173 caactgaattaggtgcttatagcgtaagtgcttatgtataaactatttctataactaaagataaaataaagtcaa-ctattttcatataagctataacta 21593075  T
Q  212 t-----gtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataag 279  Q
    |     ||||  || ||||||||||| | ||||||||||||||||| ||| | |||| | |||||||||||||    
T  21593074 taagtggtttcgataagctatcctggcgtgtttatggaaataagctgaaagcagcttataaacatgtcataag 21593002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 319
Target Start/End: Complemental strand, 27123397 - 27123312
Alignment:
Q  230 tggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtctcataagt 319  Q
    ||||||| ||||||||||||| | |||||  |||    ||||||||||||    ||||||||||||||||||||||||||||||| ||||    
T  27123397 tggagagcttatggaaataagttgaaaacaacttaaagacatgtcataag----ttgtttccataagctctctcaaacagtctcacaagt 27123312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 29601097 - 29601025
Alignment:
Q  186 aaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    |||| ||||||||| ||||||||||||||||| ||  |||||||| ||||  ||||| ||||||||| |||||    
T  29601097 aaaccattttcatgcaagctataatctgttttcatatgctatcctagagaacttatgaaaataagctgaaaac 29601025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 252
Target Start/End: Complemental strand, 32066548 - 32066434
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||||||||||||||||  |||||  | |||||||  ||||||||| | ||||  | ||||| | |||||||| |||||||||| ||||||||| | ||    
T  32066548 ataagtgcttatgtataaactacttttataacaaaagataaaataaa-ttaaaccgtgttcatatgagctataagctgtttttataagctatcctag-ga 32066451  T
Q  236 gtttatggaaataagct 252  Q
    ||||||||| |||||||    
T  32066450 gtttatggacataagct 32066434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 1965950 - 1966021
Alignment:
Q  214 tttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||||| ||||||||| || |  || |||||||||| ||||||| |||| ||||||||||||||| |||||    
T  1965950 tttttataagctatcctagaaatcttctggaaataagttaaaaacagcttatgaacatgtcataagttgttt 1966021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 12650359 - 12650304
Alignment:
Q  200 taagctataatctgtttttattagctatcctggagagtttatggaaataagctaaa 255  Q
    |||||||||| ||||||| || | ||||||||||||| |||||||||| |||||||    
T  12650359 taagctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 12650304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 18628643 - 18628560
Alignment:
Q  175 aaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    |||||| ||| ||||| |||| || |||| ||||| ||||||| || || |||| ||||||| ||||||||||||||| |||||    
T  18628643 aaaatatagtcaaactgtttttatataagttataaactgttttcataagttatcttggagagcttatggaaataagctgaaaac 18628560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 24443969 - 24444060
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctat 227  Q
    |||||| ||||||||||||  | ||| | |||||||| ||||||||| | |||| |||||||| ||||||||||  |||||| || ||||||    
T  24443969 ataagttcttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttgttttcataagctat 24444060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 285
Target Start/End: Original strand, 29263339 - 29263450
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| | | | ||||||  ||||| ||||  |||||| || |||||||||| |||| || |||||||||||| |||||  ||| ||||||| |    
T  29263339 taaaataaagttacattgttttcaaataagcgataagttgttttcataagctatcctgcagagcttgtggaaataagctgaaaacaacttatgaacatat 29263438  T
Q  274 cataagatgttt 285  Q
    |||||| |||||    
T  29263439 cataagctgttt 29263450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 207
Target Start/End: Complemental strand, 20936112 - 20936070
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctat 207  Q
    |||||||  ||||||||||| ||||||||||||||||||||||    
T  20936112 aacaaaagataaaataaagtcaaactattttcatgtaagctat 20936070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 1137739 - 1137792
Alignment:
Q  232 gagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||| |||||||||||| || |||||  ||| |||||||||||||||||||||    
T  1137739 gagagcttatggaaataaactgaaaacaacttatgaacatgtcataagatgttt 1137792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 1312860 - 1312921
Alignment:
Q  224 ctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||| ||||||||||||||||||||||| ||||| | || |||| |||| ||||| |||||    
T  1312860 ctatcttggagagtttatggaaataagctgaaaacagtttatgaatatgtaataagttgttt 1312921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 19429726 - 19429767
Alignment:
Q  222 agctatcctggagagtttatggaaataagctaaaaacggctt 263  Q
    ||||||||||||||| ||||||||||||||| ||||| ||||    
T  19429726 agctatcctggagagcttatggaaataagctgaaaacagctt 19429767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 47970249 - 47970310
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttca 197  Q
    ||||||||||||||||||| || ||| | |||||||  |||||| |||| ||||||||||||    
T  47970249 ataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaaactattttca 47970310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 56055723 - 56055803
Alignment:
Q  177 aataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    |||||| | |||||| |||||| |||||||||| || |||| | ||||||||||||| || ||||| ||||||| |||||||    
T  56055723 aataaacttaaactactttcatataagctataagctattttaactagctatcctgga-agcttatgaaaataagataaaaac 56055803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 258
Target Start/End: Complemental strand, 5131303 - 5131267
Alignment:
Q  222 agctatcctggagagtttatggaaataagctaaaaac 258  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  5131303 agctatcctggagagcttatggaaataagctgaaaac 5131267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 6979034 - 6978958
Alignment:
Q  203 gctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataag 279  Q
    |||||||  ||||||||| ||| |||||  |||||||||| ||||||||| ||||| |||| |  ||||||||||||    
T  6979034 gctataagttgtttttataagccatcctaaagagtttatgaaaataagctgaaaacagcttatagacatgtcataag 6978958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 285
Target Start/End: Original strand, 24929453 - 24929573
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttt 264  Q
    |||||||  |||||||||||  |||| |||||||  |||||||||  |||||| || | || | || ||||| ||||||||||||||| |||||   ||     
T  24929453 aacaaaagataaaataaagtctaactgttttcataaaagctataagttgttttcataaactctactagagagcttatggaaataagctgaaaacaattta 24929552  T
Q  265 tgaacatgtcataagatgttt 285  Q
    |||||||| |||||| |||||    
T  24929553 tgaacatgccataagctgttt 24929573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 258
Target Start/End: Complemental strand, 27043963 - 27043847
Alignment:
Q  142 gcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttat 241  Q
    ||||||||||||| |||||  | ||||||   ||||||||||| ||| | ||||| | ||||||||||  ||||||||| | ||||| ||||||   |||    
T  27043963 gcttatgtataaggtacttatataacaaaggataaaataaagttaaattgttttcgtataagctataagatgtttttataaactatcttggagaacgtat 27043864  T
Q  242 ggaaataagctaaaaac 258  Q
    | | |||||||||||||    
T  27043863 gaatataagctaaaaac 27043847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 35064824 - 35064908
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    ||||||||||  ||||| ||||  | || ||||||  ||||||| || || |||| ||||||||||||||||||||||| |||||    
T  35064824 taaaataaagataaactgtttttgtataggctatatgctgttttcataagatatcatggagagtttatggaaataagctgaaaac 35064908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 51630080 - 51630164
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    ||||||||||| ||| | |||| || |||||||||| || |||| || ||||||| || ||| |||||| ||||||||| |||||    
T  51630080 taaaataaagttaaattgttttgatataagctataagctattttcataagctatcttgaagaatttatgaaaataagctgaaaac 51630164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 52746950 - 52746830
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttt 264  Q
    |||||||  ||||||||||| ||| | ||||  ||||||| |||| ||||||| || ||||||| || |  | ||||| |||| |||| ||||| ||||     
T  52746950 aacaaaagataaaataaagttaaattgtttttgtgtaagccataagctgttttcataagctatcttgtaaggcttatgaaaatcagctgaaaacagctta 52746851  T
Q  265 tgaacatgtcataagatgttt 285  Q
    |||||||||| |||| |||||    
T  52746850 tgaacatgtcttaagctgttt 52746830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 279
Target Start/End: Complemental strand, 55547108 - 55547040
Alignment:
Q  211 ctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataag 279  Q
    ||||||| || |||||| ||| | ||||||||||||||||||||||||  ||| |  ||||||||||||    
T  55547108 ctgttttcataagctatgctgaaaagtttatggaaataagctaaaaacaacttatagacatgtcataag 55547040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 5e-23; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 174 - 314
Target Start/End: Original strand, 21574460 - 21574595
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| ||| | ||| ||| |||||||||| || ||||||| ||||| | ||||||| ||||||||||||||||||| | |||| |||||||||    
T  21574460 taaaataaagttaaattgtttacatataagctataa-ctttttttataagctaacatggagagcttatggaaataagctaaaagcagcttatgaacatgt 21574558  T
Q  274 cataagatgtttgtttccataagctctctcaaacagtctca 314  Q
    ||||||    |||||| ||||||||||| ||||||||||||    
T  21574559 cataag----ttgttttcataagctctcccaaacagtctca 21574595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 310
Target Start/End: Original strand, 2201097 - 2201236
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||| ||||| ||||| ||||||| |||||||||| ||||||| |||||||||| |||| |||||| ||||| ||||| ||||  | || ||||||| |    
T  2201097 taaaacaaagtcaaactgttttcatataagctataagctgttttcattagctatcttggatagtttaaggaaaaaagctgaaaagagtttatgaacatat 2201196  T
Q  274 cataagatgtttg---tttccataagctctctcaaacagt 310  Q
    |||||| |||||    ||||||||||||||| ||||||||    
T  2201197 cataagttgtttccaatttccataagctctcccaaacagt 2201236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 320
Target Start/End: Complemental strand, 25183087 - 25182946
Alignment:
Q  176 aaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagct-aaaaacggcttttgaacatgtc 274  Q
    ||||||||| || |||||||||| | |||||||| ||||||| || ||||||| |||| | ||| |||||||| ||| |||||  |||| || | |||||    
T  25183087 aaataaagttaagctattttcatatgagctataagctgttttcataagctatcatggaaaatttgtggaaatatgctgaaaaatagcttatggatatgtc 25182988  T
Q  275 ataagatgtttgtttccataagctctctcaaacagtctcataagtt 320  Q
    |||||    |||||| |||||||||||||||||||||||| |||||    
T  25182987 ataag----ttgttttcataagctctctcaaacagtctcacaagtt 25182946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 40122884 - 40122770
Alignment:
Q  143 cttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatg 242  Q
    |||||||||||| || ||| | |||||||  ||||||||||| ||||| |||||||  |||||||||  ||||||||| |||||||||  | |||| |||    
T  40122884 cttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcata-aagctataagttgtttttataagctatcctaaaaagttaatg 40122786  T
Q  243 gaaataagctaaaaac 258  Q
    ||||||||||||||||    
T  40122785 gaaataagctaaaaac 40122770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 13709918 - 13709840
Alignment:
Q  180 aaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    ||||| |||| | ||||||||||| ||||||||||||| || |||||||||||||||||||| ||||||| || |||||    
T  13709918 aaagtcaaacaaatttcatgtaaggtataatctgttttcataagctatcctggagagtttattgaaataaactgaaaac 13709840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 319
Target Start/End: Complemental strand, 14548804 - 14548681
Alignment:
Q  192 ttttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttcc 291  Q
    ||||||| ||||||||||  |||||| || || ||| |||||||| ||||||||||||||| ||||| || | | || |||||||| |    |||||| |    
T  14548804 ttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcctattaaaatgtcatacg----ttgttttc 14548709  T
Q  292 ataagctctctcaaacagtctcataagt 319  Q
    ||||||||||||||||||||||| ||||    
T  14548708 ataagctctctcaaacagtctcacaagt 14548681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 285
Target Start/End: Complemental strand, 27291038 - 27290891
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||||||||| ||||||| || ||| | ||||| ||  |||||||| |  |||| ||||||| ||| ||| || ||||||  ||||||||||||| |||    
T  27291038 ataagtgcttaggtataaggtatttctataacaagat--aaaataaattcgaacttttttcatataatctaaaagctgtttgcattagctatcctgcaga 27290941  T
Q  236 gtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||| ||||||||||||| ||||| |||| ||  ||||||||||| |||||    
T  27290940 gttcatggaaataagctgaaaacagcttatgggcatgtcataagctgttt 27290891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 258
Target Start/End: Original strand, 27792803 - 27792925
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||||||||||||||||| || ||| |||||||||  |||||||| || ||||||||||||| ||||||  ||  |||||| || | ||||| || |||    
T  27792803 ataagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataagctgcaagttgttttcataaactatcatgtaga 27792902  T
Q  236 gtttatggaaataagctaaaaac 258  Q
    | |||| |||||||||| |||||    
T  27792903 gcttatagaaataagctgaaaac 27792925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 285
Target Start/End: Complemental strand, 20192744 - 20192596
Alignment:
Q  137 taagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagag 236  Q
    |||||||||||||||||| || ||  | |||||||  ||||||||||| ||||  ||||||| ||| |||||| |||||||| | |  ||| | ||||||    
T  20192744 taagtgcttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataatctataagctgtttttgtaacttattcgggagag 20192645  T
Q  237 tttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
     |||||||||| || | ||||| |||| || |||||||||||| |||||    
T  20192644 cttatggaaatgagttgaaaacagcttatggacatgtcataagctgttt 20192596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 24887384 - 24887300
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    ||||||||||| ||||| | ||||| ||||||| || ||||||| || ||||||||||||||| |||||| |||||||| |||||    
T  24887384 taaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatcctggagagcttatgggaataagctgaaaac 24887300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 19679429 - 19679318
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| ||||| ||||| | ||||||||||  ||||||||| | ||||| ||||||||| |  ||||||||||  |||| |||||| | |||||    
T  19679429 taaaataaagtcaaactgttttcttataagctataagttgtttttataaactatcttggagagttaaaagaaataagctgcaaacagctttttagcatgt 19679330  T
Q  274 cataagatgttt 285  Q
    |||||| |||||    
T  19679329 cataagttgttt 19679318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 314
Target Start/End: Original strand, 37273135 - 37273239
Alignment:
Q  206 ataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaa 305  Q
    |||| ||||||| || ||||||| ||||||  ||||||||||||| | |||||  ||| || ||||||||||||    |||||||||||||||||| |||    
T  37273135 ataaactgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataag----ttgtttccataagctctcccaa 37273230  T
Q  306 acagtctca 314  Q
    |||||||||    
T  37273231 acagtctca 37273239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 136 - 258
Target Start/End: Original strand, 38462212 - 38462334
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||||| |||| |||||| || ||| | | |||||  ||||||||||| ||||| ||||||| || ||||||| ||||||| || ||||||||  || |    
T  38462212 ataagtgtttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatatatgctataaactgttttcataagctatccaagata 38462311  T
Q  236 gtttatggaaataagctaaaaac 258  Q
    | ||||||||||||||| |||||    
T  38462312 gcttatggaaataagctgaaaac 38462334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 24785174 - 24785279
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| || || ||||  | ||| ||||||  |||||| || ||||||||| ||||| ||||| |||||||||||||||  ||| |||||||||    
T  24785174 taaaataaagtcaatctgtttttgtataatctataacgtgttttcataagctatcctcgagagcttatgtaaataagctaaaaacaacttatgaacatgt 24785273  T
Q  274 cataag 279  Q
    ||||||    
T  24785274 cataag 24785279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 312
Target Start/End: Complemental strand, 36646483 - 36646349
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    |||||||||||  || | ||||||| |||| |||||  |||||| || ||||||||| |||||||||| |||||||| | ||||| |||| || |||||     
T  36646483 taaaataaagtataattgttttcatataagttataacttgttttcataagctatcctagagagtttatagaaataagatgaaaacagcttatggacatgc 36646384  T
Q  274 cataagatgtttgtttccataagctctctcaaacagtct 312  Q
    ||||||    | |||||||||||||||| |||| |||||    
T  36646383 cataag----tggtttccataagctctcccaaatagtct 36646349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 279
Target Start/End: Original strand, 37825129 - 37825196
Alignment:
Q  212 tgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataag 279  Q
    |||||||||||||| |||||||||| |||||||||||| || |||||  ||| || ||||||||||||    
T  37825129 tgtttttattagctttcctggagagcttatggaaataacctgaaaacaacttatggacatgtcataag 37825196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 3044342 - 3044249
Alignment:
Q  192 ttttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||||| ||| |||||| |||||||  |  |||| ||||||||| ||||| ||||||| | ||||| |||| ||||||||||||||| |||||    
T  3044342 ttttcatataatctataacctgttttcttatgctaacctggagagcttatgaaaataagttgaaaacagcttatgaacatgtcataagttgttt 3044249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 258
Target Start/End: Complemental strand, 32555091 - 32554999
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    |||||||  ||||||||||| ||| ||||||| | ||||||||||  |||||| || || ||||||||| || |||||||| ||||||||||||    
T  32555091 aacaaaagataaaataaagtcaaattattttcctataagctataagttgttttcatgagttatcctgga-agattatggaagtaagctaaaaac 32554999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 36101587 - 36101648
Alignment:
Q  224 ctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    |||||||| |||| ||||| ||||||||| ||||| |||| ||||||||||||||| |||||    
T  36101587 ctatcctgaagagcttatgaaaataagctgaaaacagcttgtgaacatgtcataagctgttt 36101648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 50952352 - 50952413
Alignment:
Q  224 ctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||| ||||||| ||||||||||||||| ||||| | || ||||||||||||||| |||||    
T  50952352 ctatcttggagagcttatggaaataagcttaaaacagtttatgaacatgtcataagctgttt 50952413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 121 - 217
Target Start/End: Original strand, 1395587 - 1395683
Alignment:
Q  121 ttaagtgcttaaggcataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttt 217  Q
    ||||| |||||  ||| |||||| |||||||||| || ||| | |||||||  ||||||||||| ||| ||||||||| |||||||| | |||||||    
T  1395587 ttaagcgcttatagcaaaagtgcatatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataagctatgaactgtttt 1395683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 20669172 - 20669244
Alignment:
Q  205 tataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcata 277  Q
    ||||| ||||||| || ||||||| ||||||| ||||| ||||||||  ||||| |||| |||||||||||||    
T  20669172 tataagctgttttcataagctatcttggagagcttatgtaaataagcggaaaacagcttatgaacatgtcata 20669244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 23785224 - 23785308
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    ||||||||||| ||||| | ||||| |||||||||| ||||||| |  |||| || ||||||| ||||||||| ||||| |||||    
T  23785224 taaaataaagtcaaactgtattcatataagctataaactgttttcacaagctctcatggagagcttatggaaacaagctgaaaac 23785308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 250
Target Start/End: Complemental strand, 24158641 - 24158528
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatt-taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggag 234  Q
    ||||||||||||||||||| || ||| | ||||||    |||| |||||||||||| |||  || ||||  |||| ||||||| || |||||||||||||    
T  24158641 ataagtgcttatgtataagttatttctataacaaatgaataaagtaaagtgaaactgttt--atataagtaataagctgttttcataagctatcctggag 24158544  T
Q  235 agtttatggaaataag 250  Q
    || |||||||||||||    
T  24158543 agcttatggaaataag 24158528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 276
Target Start/End: Complemental strand, 48049045 - 48048981
Alignment:
Q  212 tgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcat 276  Q
    |||||| |||||||||| ||| ||| ||||||||||||||| ||||| |||| || |||||||||    
T  48049045 tgttttcattagctatcttggggaggttatggaaataagctgaaaacagcttatggacatgtcat 48048981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 32069119 - 32069201
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaa 257  Q
    ||||||||||| ||| || ||||||  ||||||| | ||||||| || ||||||| ||||||| ||||| ||||||||||||||    
T  32069119 taaaataaagtcaaa-taatttcataaaagctatcaactgttttaataagctatcttggagagattatgaaaataagctaaaaa 32069201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 33725949 - 33725870
Alignment:
Q  200 taagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataag 279  Q
    |||||||||| |||||||||| | |||||||||| || |||| |||||||| | ||||| || | | |||||||||||||    
T  33725949 taagctataaactgtttttataaactatcctggaaagcttatagaaataagatgaaaacagcatatcaacatgtcataag 33725870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 285
Target Start/End: Complemental strand, 1217900 - 1217790
Alignment:
Q  175 aaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtc 274  Q
    ||||| |||| ||| | |||||||||||| ||||| ||||||| || ||||||||| ||||  ||||| || |||| | |||||  ||| || |||||||    
T  1217900 aaaatgaagttaaattgttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacatgtc 1217801  T
Q  275 ataagatgttt 285  Q
    ||||| |||||    
T  1217800 ataagctgttt 1217790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 41452494 - 41452633
Alignment:
Q  176 aaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtca 275  Q
    ||||||||| ||||| ||||||| | || | ||| ||||||| || ||||||||||||||  || |||||||||| | ||||| |||| |  |||| |||    
T  41452494 aaataaagtcaaactgttttcatattagttgtaagctgttttcataagctatcctggagaagttgtggaaataaggtgaaaacagcttatagacatatca 41452593  T
Q  276 taagatgtttgtttccataagctctctcaaacagtctcataagt 319  Q
    ||||    ||||||| ||||| ||||||||| | ||||| ||||    
T  41452594 taag----ttgtttctataaggtctctcaaatactctcacaagt 41452633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 1816552 - 1816657
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| ||||| ||||  | |||| |||||  |||||| || |||||| |||||||| ||||  ||||||||| ||||| || | |||| ||||    
T  1816552 taaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactggagagcttatcaaaataagctgaaaacagcctatgaaaatgt 1816651  T
Q  274 cataag 279  Q
    ||||||    
T  1816652 cataag 1816657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 2719431 - 2719515
Alignment:
Q  167 caaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagct 252  Q
    |||||| ||||||||||||||| | ||||  | |||||||||| ||||||| || ||||||| ||||||  ||||| |||||||||    
T  2719431 caaaatataaaataaagtgaaattgtttt-gtttaagctataaactgttttcataagctatcttggagaacttatgaaaataagct 2719515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 24625419 - 24625378
Alignment:
Q  113 caacttaattaagtgcttaaggcataagtgcttatgtataag 154  Q
    ||||||||||||| |||||  |||||||||||||||||||||    
T  24625419 caacttaattaagcgcttatagcataagtgcttatgtataag 24625378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 271
Target Start/End: Complemental strand, 25453960 - 25453863
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacat 271  Q
    ||||||||||| ||||| ||||| | ||| |||||| || |||| || | |||||||||| || ||||| ||||||||| ||||  |||| |||||||    
T  25453960 taaaataaagtcaaactgttttcgtataacctataacctattttcataaactatcctggaaagcttatgaaaataagctgaaaagagcttgtgaacat 25453863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 30923949 - 30923888
Alignment:
Q  224 ctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||||| |||||||||| |||||||||| ||||| |||| |  |||||||||||| |||||    
T  30923949 ctatcctagagagtttatagaaataagctgaaaacagcttatagacatgtcataagctgttt 30923888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 36139897 - 36139958
Alignment:
Q  224 ctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||| || |||| ||||| ||||||||| ||||| |||| ||||||||||||||| |||||    
T  36139897 ctatcttgaagagcttatgaaaataagctgaaaacagcttgtgaacatgtcataagctgttt 36139958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 53457309 - 53457370
Alignment:
Q  137 taagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcat 198  Q
    |||||| ||| ||||||| |||||| | |||||||  ||||||||||| |||||||||||||    
T  53457309 taagtgtttacgtataagctacttcgataacaaaagataaaataaagtcaaactattttcat 53457370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 2923466 - 2923530
Alignment:
Q  193 tttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaa 257  Q
    ||||||||||||||||| ||||||| || |||||  ||| |||| ||||  ||||||||||||||    
T  2923466 tttcatgtaagctataagctgttttcataagctacactgaagagattatataaataagctaaaaa 2923530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 25925764 - 25925816
Alignment:
Q  227 tcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataag 279  Q
    |||||||||| ||||| ||||||| | ||||| |||| |||||||||||||||    
T  25925764 tcctggagagcttatgaaaataagttgaaaacagcttatgaacatgtcataag 25925816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 36200108 - 36200176
Alignment:
Q  217 ttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    |||| |||||||||| |||| | ||||||||||||| |||||  ||| || |||||||||||| |||||    
T  36200108 ttataagctatcctgtagagctcatggaaataagctgaaaacaacttatggacatgtcataagttgttt 36200176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 45432988 - 45432936
Alignment:
Q  226 atcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataa 278  Q
    |||||| |||| ||||||||||||||| |||||  ||| ||||||||||||||    
T  45432988 atcctgtagagcttatggaaataagctgaaaacaacttatgaacatgtcataa 45432936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 279
Target Start/End: Original strand, 48528562 - 48528630
Alignment:
Q  211 ctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataag 279  Q
    ||||||| || |||||| ||||||||||||| |||||||||| ||||| | || || ||||| ||||||    
T  48528562 ctgttttcataagctattctggagagtttatagaaataagctgaaaactgtttatggacatgccataag 48528630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 136 - 314
Target Start/End: Original strand, 52286609 - 52286784
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||| ||||||| |||||||| ||| | |||||||  ||||||||||| |||| |||||||| |||||||||| || |||| || ||  ||| || |||    
T  52286609 ataagcgcttatgaataagatatttctacaacaaaagataaaataaagttaaacaattttcatataagctataaactattttcataagtcatcttgaaga 52286708  T
Q  236 gtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccat-aagctctctcaaacagtctca 314  Q
    ||||||||||||||||||||||  |||| || |||| ||| ||||    ||||||| | |||||||||||||||||||||    
T  52286709 gtttatggaaataagctaaaaatagcttatggacatatcagaaga----tgtttccgtaaagctctctcaaacagtctca 52286784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 279
Target Start/End: Original strand, 17269181 - 17269324
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||||||||||||||||| || ||| | ||||||| | |||||||||| ||| | ||||||| ||||| ||||  |||||| || ||||||||||||||    
T  17269181 ataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttgttttcataagctatcctggaga 17269280  T
Q  236 gtttatggaaataagctaaaaacggcttttgaacatgtcataag 279  Q
    | ||| || |||||| |||||||  ||  |||||||||||||||    
T  17269281 gcttacggtaataagttaaaaacaactcatgaacatgtcataag 17269324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 312
Target Start/End: Original strand, 15579415 - 15579585
Alignment:
Q  137 taagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagag 236  Q
    |||||||||||||||||| || ||| | ||| ||| || ||||||| | ||| | |||||||||||||||||| ||||| |  | ||||||| ||  |||    
T  15579415 taagtgcttatgtataagctatttctataactaaagttcaaataaa-tcaaattgttttcatgtaagctataagctgttctcgtaagctatcatgttgag 15579513  T
Q  237 tttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtct 312  Q
    |||||||||||||||| | |||  ||| || ||||||||||||    ||||||||| |||||||| ||||||||||    
T  15579514 tttatggaaataagctgagaacaacttatggacatgtcataag----ttgtttccacaagctctcccaaacagtct 15579585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 12477388 - 12477283
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| ||||| |||||||||||| ||||  || |||| || ||||||| |||||||| |||||||||||||| |||||  ||| || ||||||    
T  12477388 taaaataaagtcaaactgttttcatgtaagatatatgcttttttaataagctatcatggagagtgtatggaaataagctgaaaacaacttatggacatgt 12477289  T
Q  274 cataag 279  Q
    ||||||    
T  12477288 cataag 12477283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 186 - 284
Target Start/End: Original strand, 4622074 - 4622172
Alignment:
Q  186 aaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtt 284  Q
    ||||| ||||||| |||||||||| ||||||  ||  |||||| ||||||| || || ||||||||||||||| |||| || |||||||||||||||||    
T  4622074 aaactcttttcatataagctataagctgtttccatatgctatcttggagagcttgtgaaaataagctaaaaacagcttatggacatgtcataagatgtt 4622172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 278
Target Start/End: Original strand, 30257652 - 30257756
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| ||||| ||| ||| |||||| |||  |||||| || | ||||||||||| | |||| |||||||||| ||||| |||| |||||||||    
T  30257652 taaaataaagtcaaactgtttccatataagctttaagttgttttcataaactatcctggagggcttatagaaataagctgaaaacagcttatgaacatgt 30257751  T
Q  274 cataa 278  Q
    |||||    
T  30257752 cataa 30257756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 314
Target Start/End: Original strand, 10439655 - 10439791
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    |||||| |||| ||| ||||||||| |||||||| | || | || |  | ||||||||||||||||||||||||||||| ||| | | || || ||||||    
T  10439655 taaaatgaagtcaaattattttcatataagctatcagctatattcaaaaactatcctggagagtttatggaaataagctgaaagcagattatggacatgt 10439754  T
Q  274 cataagatgtttgtttccataagctctctcaaacagtctca 314  Q
    ||||    |||||||| ||||||||||| |||| |||||||    
T  10439755 cata----gtttgttttcataagctctcccaaatagtctca 10439791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 35925707 - 35925770
Alignment:
Q  222 agctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||||| ||||||||||||||||||||| | ||||| |||| ||||||||||||||| |||||    
T  35925707 agctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataagctgttt 35925770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 165 - 255
Target Start/End: Complemental strand, 27738290 - 27738200
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaa 255  Q
    |||||||  ||||||||||| ||| | ||||||| ||||||||||| |||||| || |||||| | |||||| ||||||| ||||||||||    
T  27738290 aacaaaagataaaataaagtcaaattgttttcatataagctataatttgttttcataagctatacaggagagcttatggatataagctaaa 27738200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 44422680 - 44422746
Alignment:
Q  186 aaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagct 252  Q
    ||||| ||||||| |||||||||| || ||||||| ||||||||||||||| ||||| |||||||||    
T  44422680 aaactgttttcatataagctataagctatttttataagctatcctggagagcttatgaaaataagct 44422746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 4699666 - 4699605
Alignment:
Q  224 ctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    |||||| |||||| |||| |||||||||||||||| |||| ||||||||||||||| |||||    
T  4699666 ctatcccggagagcttatagaaataagctaaaaacagcttatgaacatgtcataagttgttt 4699605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 7218175 - 7218070
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| ||| | ||||||| ||||||||||  |||||| || | ||||||||||||  ||||| ||||||| | ||||| |||| ||||| |||    
T  7218175 taaaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaacagcttgtgaacgtgt 7218076  T
Q  274 cataag 279  Q
    ||||||    
T  7218075 cataag 7218070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 319
Target Start/End: Complemental strand, 31517850 - 31517700
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttt 264  Q
    |||||||  ||||||||||| ||| |  |||||| |||||||||| |||| || || | || || ||||||| ||||| ||||||||| ||||| ||||     
T  31517850 aacaaaagataaaataaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagctta 31517751  T
Q  265 tgaacatgtcataagatgtttgtttccataagctctctcaaacagtctcataagt 319  Q
    |||||||||||| ||    ||||||  ||||| |||| |||||||||||| ||||    
T  31517750 tgaacatgtcatgag----ttgttttgataagttctcccaaacagtctcacaagt 31517700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 15361682 - 15361766
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    |||| |||||| ||| ||||||||| |||||||||| ||||||| || || ||| || |||||||||||||| |||||| |||||    
T  15361682 taaagtaaagtcaaattattttcatataagctataagctgttttcataagatattcttgagagtttatggaattaagctgaaaac 15361766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 285
Target Start/End: Original strand, 27140478 - 27140558
Alignment:
Q  205 tataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||| |||||||||| ||||||| ||||||| ||||| ||||||||| |||||  ||| || |||||||||||| |||||    
T  27140478 tataagctgtttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcataagctgttt 27140558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 285
Target Start/End: Complemental strand, 28482315 - 28482223
Alignment:
Q  193 tttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    |||||| |||||||||| |||||||||| || |||| ||||||| ||| | ||||||||||||||  | || |||| || |||||||||||||    
T  28482315 tttcatataagctataagctgtttttataagttatcttggagagcttacgaaaataagctaaaaatagtttatgaatatatcataagatgttt 28482223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 284
Target Start/End: Complemental strand, 35080180 - 35080060
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgttttt-attagctatcctggagagtttatggaaataagctaaaaacggctt 263  Q
    |||||||  ||||||||||| ||||| ||| ||| |||||  ||| || ||||| || ||||||| ||||||| || | |||||||||| ||||| ||||    
T  35080180 aacaaaaaataaaataaagtcaaactgtttccatataagcgctaagctttttttcatgagctatcatggagagcttgtcgaaataagctcaaaacagctt 35080081  T
Q  264 ttgaacatgtcataagatgtt 284  Q
     ||||||||||||||| ||||    
T  35080080 atgaacatgtcataagttgtt 35080060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 45205037 - 45205121
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    ||||||||||| ||||||||| ||| ||||||| ||  |||||| || ||||||| || |||||| ||||||||||||| |||||    
T  45205037 taaaataaagtcaaactatttccatataagctagaagttgttttcataagctatcatgtagagttcatggaaataagctgaaaac 45205121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 232 - 320
Target Start/End: Original strand, 6976952 - 6977035
Alignment:
Q  232 gagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtctcataagtt 320  Q
    ||||||||||||||||||| | ||||| |||| |||||||||||||||    |||||||||| ||||||| ||||||| |||| |||||    
T  6976952 gagagtttatggaaataag-ttaaaacagcttatgaacatgtcataag----ttgtttccattagctctcgcaaacagcctcacaagtt 6977035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 253
Target Start/End: Complemental strand, 48830177 - 48830098
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagcta 253  Q
    ||||||||||| ||||||||||||| |||||||||| ||||||| || |||||| ||  |||| | || |||||||||||    
T  48830177 taaaataaagtcaaactattttcatataagctataaactgttttcataagctattctaaagagctaatagaaataagcta 48830098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 258
Target Start/End: Complemental strand, 4700141 - 4700083
Alignment:
Q  200 taagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    |||||||||| |||||||||| | ||||||||||||| ||||| ||||||||| |||||    
T  4700141 taagctataaactgtttttataaactatcctggagagcttatgaaaataagctgaaaac 4700083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 250
Target Start/End: Original strand, 5150900 - 5150982
Alignment:
Q  168 aaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataag 250  Q
    ||||| ||||||||||| ||||||||||||| |||| | |||| |||||| || ||||||| || |||| |||| ||||||||    
T  5150900 aaaatataaaataaagtcaaactattttcatttaagttgtaatttgttttcataagctatcatgaagagcttatagaaataag 5150982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 268
Target Start/End: Original strand, 9656619 - 9656713
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaa 268  Q
    ||||||||||| ||| ||||||||| |||||||||| |||| || || ||||||||||||    ||||| ||||||||| ||||| |||| ||||    
T  9656619 taaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggatgaattatgaaaataagctcaaaacagcttatgaa 9656713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 285
Target Start/End: Original strand, 26184683 - 26184828
Alignment:
Q  137 taagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagag 236  Q
    ||||| |||||||||||  || ||| | || ||||  ||||||||||| ||| |||||||||   ||  ||||||||| || || |  ||||||||||||    
T  26184683 taagtacttatgtataaactatttctataagaaaaggtaaaataaagtcaaattattttcat---agtcataatctgtattcataaattatcctggagag 26184779  T
Q  237 tttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
     |||||||||||| || ||||| |||| || |||||||||||| |||||    
T  26184780 cttatggaaataatctgaaaacagcttatggacatgtcataagctgttt 26184828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 10199509 - 10199404
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| ||||||||||| | ||| | |||| || |||| || ||||||  | ||||| ||||| ||||||||| |||||  ||| |||||||||    
T  10199509 taaaataaagtcaaactattttcgtataatcgataagcttttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaacatgt 10199410  T
Q  274 cataag 279  Q
    ||||||    
T  10199409 cataag 10199404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 200 - 277
Target Start/End: Complemental strand, 14630041 - 14629964
Alignment:
Q  200 taagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcata 277  Q
    |||||||||| || |||| || ||||||| |||||| |||||||||||||||| |||||  ||| ||||||| |||||    
T  14630041 taagctataagctattttcataagctatcttggagactttatggaaataagctgaaaacaacttatgaacatatcata 14629964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 250
Target Start/End: Complemental strand, 30259624 - 30259511
Alignment:
Q  138 aagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttat-tagctatcctggagag 236  Q
    ||||||||||| | ||| || ||| | |||||||| ||||||||||| |||||  ||| || |||||||||| ||||||  ||  ||||||| |||||||    
T  30259624 aagtgcttatgcacaagctatttctataacaaaatataaaataaagtcaaactgctttgatataagctataagctgtttgcataaagctatcatggagag 30259525  T
Q  237 tttatggaaataag 250  Q
     |||||||||||||    
T  30259524 cttatggaaataag 30259511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 258
Target Start/End: Complemental strand, 34179982 - 34179889
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    |||||||  ||||||||||| ||| | |||| || |||||||||| ||||||| || | |||||||| | |||||||||||||| ||| |||||    
T  34179982 aacaaaagataaaataaagtcaaattgttttaatctaagctataaactgttttcataaactatcctgaaaagtttatggaaatacgctgaaaac 34179889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 279
Target Start/End: Complemental strand, 45999429 - 45999284
Alignment:
Q  134 gcataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctgga 233  Q
    ||||||||||| ||||||||| || ||| | |||||||  ||| ||||||| |||||  |||||| |||||||||| |  ||||  | ||||||| |  |    
T  45999429 gcataagtgctcatgtataagctatttctataacaaaagataagataaagtcaaactgctttcatataagctataaccaattttcgtaagctatcattta 45999330  T
Q  234 gagtttatggaaataagctaaaaacggcttttgaacatgtcataag 279  Q
    ||| ||| ||| ||||||| ||||| | || |||||||||||||||    
T  45999329 gagattacggacataagctgaaaacagtttatgaacatgtcataag 45999284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 16322818 - 16322902
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    ||||||| ||| |||||||||||||  ||| ||||| ||||||| ||  |||||  || |||| |||||||||||||||||||||    
T  16322818 taaaatatagtcaaactattttcatagaagttataagctgttttcataggctattttgaagagcttatggaaataagctaaaaac 16322902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 251
Target Start/End: Original strand, 3924631 - 3924670
Alignment:
Q  212 tgtttttattagctatcctggagagtttatggaaataagc 251  Q
    ||||||||| |||||||||| |||||||||||||||||||    
T  3924631 tgtttttataagctatcctgaagagtttatggaaataagc 3924670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 285
Target Start/End: Original strand, 6292518 - 6292573
Alignment:
Q  230 tggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||||| ||||| ||||||||| ||||| |||| ||||||||||||||| |||||    
T  6292518 tggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctgttt 6292573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 285
Target Start/End: Complemental strand, 7262627 - 7262508
Alignment:
Q  166 acaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggctttt 265  Q
    ||||||| || |||||||| ||||| ||||||| | |  |||||  | |||| || |||||||||| |||| || |||||||||| | ||||| |||| |    
T  7262627 acaaaatgtataataaagttaaactgttttcattttaagtataagttcttttcataagctatcctgaagagcttgtggaaataaggtgaaaacagcttat 7262528  T
Q  266 gaacatgtcataagatgttt 285  Q
    |||||||||| ||| |||||    
T  7262527 gaacatgtcaaaagctgttt 7262508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 24146332 - 24146297
Alignment:
Q  223 gctatcctggagagtttatggaaataagctaaaaac 258  Q
    |||||||| |||||||||||||||||||||||||||    
T  24146332 gctatccttgagagtttatggaaataagctaaaaac 24146297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 310
Target Start/End: Original strand, 4481969 - 4482031
Alignment:
Q  244 aaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagt 310  Q
    ||||||||||||||| |||| ||||||||| |||||    |||||| |||||| |||||||||||||    
T  4481969 aaataagctaaaaacagcttatgaacatgtaataag----ttgttttcataagttctctcaaacagt 4482031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 258
Target Start/End: Original strand, 11211078 - 11211171
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    |||||||  ||||||||||| ||| | ||||||| |||| || || || |||| || |||| |  ||||||||||||||||||||| |||||||    
T  11211078 aacaaaagataaaataaagttaaatttttttcatataagataaaaactattttcataagctgttatggagagtttatggaaataagttaaaaac 11211171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 285
Target Start/End: Complemental strand, 11639459 - 11639406
Alignment:
Q  232 gagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||| ||||| ||||||||||||||| |||| || |||||||||||| |||||    
T  11639459 gagagcttatgaaaataagctaaaaacagcttatggacatgtcataagctgttt 11639406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 305
Target Start/End: Original strand, 15437981 - 15438059
Alignment:
Q  223 gctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaa 305  Q
    |||||||| ||||||||| ||||||||||| |||    ||| |||||||||||||||    |||||||||||| |||||||||    
T  15437981 gctatcctcgagagtttacggaaataagctgaaagtaacttatgaacatgtcataag----ttgtttccataacctctctcaa 15438059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 17009591 - 17009550
Alignment:
Q  270 atgtcataagatgtttgtttccataagctctctcaaacagtc 311  Q
    ||||| |||| ||||||||||||||||||||| |||||||||    
T  17009591 atgtcctaagttgtttgtttccataagctctcccaaacagtc 17009550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 26630434 - 26630507
Alignment:
Q  176 aaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataa 249  Q
    ||||||||| ||| | ||||||| |||||||||| ||||||| ||  |||||||||||||   |||||||||||    
T  26630434 aaataaagtaaaattgttttcatataagctataaactgttttgatacgctatcctggagaacatatggaaataa 26630507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 37842430 - 37842345
Alignment:
Q  200 taagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||||||||  |||||| || ||||||| || |||  ||||  ||||||||| ||||| |||| |||||||||||| ||||||||    
T  37842430 taagctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacatgtcattagatgttt 37842345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 285
Target Start/End: Complemental strand, 3887765 - 3887621
Alignment:
Q  142 gcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttat 241  Q
    ||||||||||||| || ||| | | |||||  ||||||||||| ||| || |||| |   |||||||| ||| |||||  ||||| |  |||||  ||||    
T  3887765 gcttatgtataagctatttcaatagcaaaagataaaataaagttaaattaatttcttacgagctataagctgattttacaagctagctaggagaacttat 3887666  T
Q  242 ggaaataagctaaaaacggcttttgaac-atgtcataagatgttt 285  Q
    | ||||||| ||||||| |||| ||||| ||||||||||||||||    
T  3887665 gaaaataagttaaaaacagcttatgaacaatgtcataagatgttt 3887621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 6976885 - 6976941
Alignment:
Q  142 gcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcat 198  Q
    |||||||||||||||| ||| | |||||||  ||| ||||||| |||||||||||||    
T  6976885 gcttatgtataagatatttctataacaaaagataagataaagttaaactattttcat 6976941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 15566737 - 15566661
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataag 250  Q
    ||||||||||| ||||| || || | |||| |||||||| |||| || ||||||| |||| |||||||||| |||||    
T  15566737 taaaataaagtcaaactgttctcctttaagttataatctattttcataagctatcatggaaagtttatggatataag 15566661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 319
Target Start/End: Original strand, 15581223 - 15581364
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| ||  |||||| || |||||||||| || ||||||| || ||| || ||| | |||| |||||| ||| ||||| |||| |  ||||||    
T  15581223 taaaataaagttaatatatttttatataagctataagctttttttataaggtatgctagagggcttatagaaataggctgaaaacagcttatagacatgt 15581322  T
Q  274 cataagatgtttgtttccataagctctctcaaacagtctcataagt 319  Q
    ||||||    |||||||||| ||||||  |||||| ||||| ||||    
T  15581323 cataag----ttgtttccattagctcttccaaacaatctcacaagt 15581364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 17628568 - 17628689
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    |||| |||||| ||| | ||||||| |||  ||||| |||||||||||| ||||  |||||   || |||||||| ||| ||||| |||| || ||||||    
T  17628568 taaagtaaagtcaaattgttttcatataaattataagctgtttttattaactattttggaggtcttttggaaatatgctgaaaacagcttatggacatgt 17628667  T
Q  274 cataagatgtttgtttccataagctc 299  Q
    ||||||    ||||||||||||||||    
T  17628668 cataag----ttgtttccataagctc 17628689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 25479570 - 25479654
Alignment:
Q  194 ttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataa 278  Q
    ||||| || |||||||  |||||| || ||||||||| ||||| ||||| ||||||||| |||||  ||  ||||||||||||||    
T  25479570 ttcatataggctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaacatgtcataa 25479654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 279
Target Start/End: Complemental strand, 27887218 - 27887114
Alignment:
Q  175 aaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtc 274  Q
    |||||||||| |||| |||| ||| ||||||||||  |||||| || | ||||| |||||||  |||  |||||||||||||||   || || |||||||    
T  27887218 aaaataaagtcaaacaatttccatataagctataagttgttttcataaactatcatggagagcatataaaaataagctaaaaacaatttatggacatgtc 27887119  T
Q  275 ataag 279  Q
    |||||    
T  27887118 ataag 27887114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 28689537 - 28689442
Alignment:
Q  192 ttttcatgtaagctataatctgtttt--tattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||||| ||||||||||  ||||||  ||| ||||||| |||| || ||||| ||||||||| |||||  ||| || |||||||||||| |||||    
T  28689537 ttttcatataagctataagttgttttcatataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggacatgtcataagctgttt 28689442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 28935929 - 28935873
Alignment:
Q  222 agctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataa 278  Q
    |||||||||| |||| ||||||||||||||||||||   ||| || |||||||||||    
T  28935929 agctatcctgaagagcttatggaaataagctaaaaaaaacttatggacatgtcataa 28935873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 276
Target Start/End: Complemental strand, 44032138 - 44031998
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||||| |||||||||||    ||| | |||||||  ||||||||||| ||| | ||||||| |||||||||| || ||||  | || |||| || |||    
T  44032138 ataagtgtttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcatataagctataaactattttcttaagttatcttgaaga 44032039  T
Q  236 gtttatggaaataagctaaaaacggcttttgaacatgtcat 276  Q
    | |||||||||| |||| ||||  |||| || |||||||||    
T  44032038 gcttatggaaattagctgaaaatagcttatggacatgtcat 44031998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 7e-22; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 137 - 319
Target Start/End: Original strand, 28165023 - 28165201
Alignment:
Q  137 taagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagag 236  Q
    |||||||||||||||||| |  ||| | |||||||  |||||| |||| ||| | |||| || |||||||||| |||| ||||| ||||||| |||||||    
T  28165023 taagtgcttatgtataagttctttctataacaaaagataaaatgaagtcaaattgttttaatataagctataaactgtctttataagctatcatggagag 28165122  T
Q  237 tttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtctcataagt 319  Q
     ||||||||||||| | ||||| |||| |||||| ||| | ||     |||||||||||||| ||||||| ||||||||||||    
T  28165123 cttatggaaataagttgaaaacagcttatgaacaggtcttgag----ctgtttccataagctatctcaaagagtctcataagt 28165201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 174 - 314
Target Start/End: Complemental strand, 48157221 - 48157085
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||||||| | |||| || ||||||||||| |||||| |  |||||| | |||||  ||||||||||||||| ||||| |||| || |||||     
T  48157221 taaaataaagtgaaattgttttaatataagctataatttgttttcacaagctattcgggagatcttatggaaataagctgaaaacagcttatggacatgg 48157122  T
Q  274 cataagatgtttgtttccataagctctctcaaacagtctca 314  Q
    ||||||    ||||||| |||||||||| ||||||||||||    
T  48157121 cataag----ttgtttctataagctctcccaaacagtctca 48157085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 33646049 - 33645918
Alignment:
Q  187 aactattttcatgt-aagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    |||||||||||| | ||||||||| ||||||| || ||||||| ||||||| |||||||||||| ||||||||  ||| |  ||||||||||||    ||    
T  33646049 aactattttcatattaagctataaactgttttcataagctatc-tggagagcttatggaaataacctaaaaacaacttatagacatgtcataag----tt 33645955  T
Q  286 gtttccataagctctct-caaacagtctcataagttt 321  Q
    ||||||||||||||||| ||| |||||||| ||||||    
T  33645954 gtttccataagctctctccaaccagtctcacaagttt 33645918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 163 - 273
Target Start/End: Original strand, 38010672 - 38010782
Alignment:
Q  163 aaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggct 262  Q
    |||||||||  ||||| ||||  ||| | ||||||| |||||||||| ||||||| || | ||||||| ||||  ||||||||||||||||||||| |||    
T  38010672 aaaacaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagct 38010771  T
Q  263 tttgaacatgt 273  Q
    | |||||||||    
T  38010772 tatgaacatgt 38010782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 36598388 - 36598321
Alignment:
Q  243 gaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtctca 314  Q
    |||||||||| ||||| |||| |||||||||||||||||    ||||||||||||||||||||||| |||||    
T  36598388 gaaataagctgaaaacagcttatgaacatgtcataagat----gtttccataagctctctcaaacaatctca 36598321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 174 - 268
Target Start/End: Complemental strand, 40689087 - 40688993
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaa 268  Q
    ||||||||||| ||| ||||||||| |||||||||| |||| || || |||||||||||| |  ||||| ||||||||| ||||| |||| ||||    
T  40689087 taaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataagctcaaaacagcttatgaa 40688993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 177 - 319
Target Start/End: Complemental strand, 44151578 - 44151436
Alignment:
Q  177 aataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcat 276  Q
    |||||||| ||||| ||| ||| ||||||||||  |||||| || | ||||| || | || ||||||||||||||| |||||  ||| || |||||||||    
T  44151578 aataaagtaaaactgtttccatataagctataagttgttttcataaactatcttgaaaagcttatggaaataagctgaaaacatcttatggacatgtcat 44151479  T
Q  277 aagatgtttgtttccataagctctctcaaacagtctcataagt 319  Q
    || |   |||||| |||||||||||||||| | ||||| ||||    
T  44151478 aaaaaaattgttttcataagctctctcaaataatctcacaagt 44151436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 136 - 285
Target Start/End: Complemental strand, 3610879 - 3610730
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||||||||||||||||| || ||| | |||||||  |||||| |||  ||||| ||||  | ||||||||||  ||||||  | | ||||||| ||||    
T  3610879 ataagtgcttatgtataagctatttctacaacaaaagataaaatgaaggcaaactgttttggtataagctataagttgttttcgtaaactatcctagaga 3610780  T
Q  236 gtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    | |||| |||||||||| |||| ||||| || ||||||||| || |||||    
T  3610779 gcttatagaaataagctgaaaaaggcttatggacatgtcattagctgttt 3610730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 27378965 - 27378845
Alignment:
Q  137 taagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagag 236  Q
    |||||||||||||||||| || ||| |  |||||| | ||||||||||  |||| ||||||| ||| ||| |||||||||| || | |||||||||||||    
T  27378965 taagtgcttatgtataagctatttctattacaaaagt-aaaataaagtagaactgttttcatataaactacaatctgttttcataaactatcctggagag 27378867  T
Q  237 tttatggaaataagctaaaaac 258  Q
     ||||| |||||| || |||||    
T  27378866 cttatgaaaataaactgaaaac 27378845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 17989133 - 17989049
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataa 249  Q
    |||||||| ||||||||||| ||||| ||||||| ||| ||||||| |||||| || |||| ||||| |||| ||||| ||||||    
T  17989133 aacaaaatataaaataaagtcaaactgttttcatataaactataatttgttttcataagctctcctgaagagcttatgaaaataa 17989049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 23721469 - 23721553
Alignment:
Q  168 aaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagct 252  Q
    |||| ||| |||||||| ||||||||||||| ||| ||||||  ||||||||| ||||||||| | | | |||||||||||||||    
T  23721469 aaaagttagaataaagtcaaactattttcatttaaactataagttgtttttataagctatccttgtgcgcttatggaaataagct 23721553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 30812143 - 30812195
Alignment:
Q  200 taagctataatctgtttttattagctatcctggagagtttatggaaataagct 252  Q
    |||||||||| ||||||| |||||||||| ||||||| |||||||||||||||    
T  30812143 taagctataagctgttttcattagctatcatggagagcttatggaaataagct 30812195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 285
Target Start/End: Original strand, 12110329 - 12110440
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| ||| | ||||  | |||||||||| ||||||| || ||||||| || |||  ||||| |||||| |||||||| | || |||||||||    
T  12110329 taaaataaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaagaacttatgaaaataatctaaaaacagtttgtgaacatgt 12110428  T
Q  274 cataagatgttt 285  Q
    |||||| |||||    
T  12110429 cataagttgttt 12110440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 285
Target Start/End: Original strand, 28702731 - 28702829
Alignment:
Q  186 aaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||| |||||||||||| ||||  ||||||| || ||||||||||| ||| | ||||||||||| |  |||| |||| ||||||||||||||| |||||    
T  28702731 aaactgttttcatgtaagttatacactgttttcataagctatcctggcgagctcatggaaataag-ttcaaaccgcttatgaacatgtcataagttgttt 28702829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 285
Target Start/End: Complemental strand, 44615180 - 44615094
Alignment:
Q  199 gtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||||||||| ||||||| || || || ||| ||||||||||||||||||  | ||||| |||| || |||||||||||| |||||    
T  44615180 gtaagctataaactgttttcataagttagccttgagagtttatggaaataacgtgaaaacagcttgtggacatgtcataagttgttt 44615094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 275
Target Start/End: Complemental strand, 24363702 - 24363601
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||| ||| || ||||||||||  | | |||||  |||||| || ||||||||||||||| ||||||||||||||| |||||  ||| || ||||||    
T  24363702 taaaatagagtcaatctattttcatacaggttataagttgttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacatgt 24363603  T
Q  274 ca 275  Q
    ||    
T  24363602 ca 24363601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 256
Target Start/End: Original strand, 47177606 - 47177687
Alignment:
Q  175 aaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaa 256  Q
    |||| ||||| ||| | ||||||| |||||||||| ||||||| |  ||||||| |||||| |||||| |||||||||||||    
T  47177606 aaaacaaagttaaattgttttcatataagctataagctgttttcaaaagctatcttggagaatttatgaaaataagctaaaa 47177687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 27548194 - 27548310
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    |||||||||||| |||||| || ||||  | |||||  |||||||||||  || | ||||||| |||||||||| ||||||| || ||||||| |||| |    
T  27548194 ataagtgcttatctataagctatttccttagcaaaagataaaataaagtctaattgttttcatttaagctataagctgttttcataagctatcttggata 27548293  T
Q  236 gtttatggaaataagct 252  Q
      ||||||| |||||||    
T  27548294 acttatggagataagct 27548310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 31002693 - 31002773
Alignment:
Q  137 taagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttt 217  Q
    |||||||||||||||||  || ||| |  ||||||  ||||||||||| ||| ||||||||| |||||||||| |||||||    
T  31002693 taagtgcttatgtataaactatttcaaccacaaaagataaaataaagtcaaaatattttcatataagctataagctgtttt 31002773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 258
Target Start/End: Complemental strand, 46056087 - 46056027
Alignment:
Q  198 tgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    ||||||||||||  |||||| || |||||||| | |||| |||||||||||||||||||||    
T  46056087 tgtaagctataaattgttttcataagctatcccgtagagcttatggaaataagctaaaaac 46056027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 5006619 - 5006540
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatgga 244  Q
    |||||||  ||||||||||| ||||| ||||||| |||| |||||  |||||| || ||||| ||||||||||| |||||    
T  5006619 aacaaaagataaaataaagtcaaactgttttcatataaggtataaattgttttcataagctaccctggagagttcatgga 5006540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 278
Target Start/End: Complemental strand, 9423658 - 9423591
Alignment:
Q  211 ctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataa 278  Q
    ||||||| || ||||||||||||||| || | |||||||||| |||||  ||| ||||||||||||||    
T  9423658 ctgttttaataagctatcctggagagcttcttgaaataagctgaaaacaacttatgaacatgtcataa 9423591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 12234950 - 12234879
Alignment:
Q  214 tttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||||| |||| |||| ||||| ||||||||||||||| ||||| |||| |  |||||||||||| |||||    
T  12234950 tttttatgagctttcctagagagcttatggaaataagctgaaaacagcttatagacatgtcataagttgttt 12234879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 314
Target Start/End: Complemental strand, 22387941 - 22387861
Alignment:
Q  230 tggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtctca 314  Q
    ||||||| ||||||||||||| ||||||| | || | |||||| ||||||    |||||| ||||||||||| ||||||||||||    
T  22387941 tggagagcttatggaaataagttaaaaacagtttataaacatgccataag----ttgttttcataagctctcccaaacagtctca 22387861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 29363487 - 29363562
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataa 249  Q
    ||||||||||| ||||| ||||||| | || ||||| ||||| | || || |||||||||||| ||||||||||||    
T  29363487 taaaataaagtcaaactgttttcatattagttataagctgttatcataagttatcctggagagcttatggaaataa 29363562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 320
Target Start/End: Complemental strand, 39591492 - 39591457
Alignment:
Q  285 tgtttccataagctctctcaaacagtctcataagtt 320  Q
    |||||||||||||||||||||||| |||||||||||    
T  39591492 tgtttccataagctctctcaaacaatctcataagtt 39591457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 40439061 - 40439112
Alignment:
Q  212 tgtttttattagctatcctggagagtttatggaaataagctaaaaacggctt 263  Q
    |||||| ||||||||||||| |||| ||||||||||||| ||||||| ||||    
T  40439061 tgttttcattagctatcctgaagagcttatggaaataagttaaaaacagctt 40439112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 319
Target Start/End: Original strand, 4966087 - 4966266
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    |||||| ||||| |||||| || ||||| ||||||   ||||||||  | ||||  ||||||| | || ||||| ||||||| || ||| |||||| |||    
T  4966087 ataagttcttatatataagttatttccacaacaaaggataaaataatatcaaacagttttcatattaggtataagctgttttcataagccatcctgaaga 4966186  T
Q  236 gtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtctcataagt 319  Q
    | |||||||||||| || |||||  ||| || |||| |||||||    | ||||| ||||||||||  ||||||||||| ||||    
T  4966187 gcttatggaaataaactgaaaacaacttatggacatatcataag----tggtttctataagctctcctaaacagtctcacaagt 4966266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 5369828 - 5369737
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcc 229  Q
    ||||||||||||||||||| || ||| | || |||| ||  |||||||| ||||| ||||||| || ||||||| ||||||| || ||||||||    
T  5369828 ataagtgcttatgtataagctaattctataaaaaaaatt--aataaagtcaaactgttttcatatatgctataagctgttttcataagctatcc 5369737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 27517898 - 27517852
Alignment:
Q  233 agagtttatggaaataagctaaaaacggcttttgaacatgtcataag 279  Q
    |||||||||||||||||||| ||||| |||| || ||||||||||||    
T  27517898 agagtttatggaaataagctgaaaactgcttatggacatgtcataag 27517852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 28340497 - 28340427
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatgga 244  Q
    ||||||||||| ||||| |||||||||||| |||||  |||||| |  |||||| |||||||| |||||||    
T  28340497 taaaataaagtcaaactgttttcatgtaagttataagttgttttcagaagctatgctggagagcttatgga 28340427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 319
Target Start/End: Original strand, 36537951 - 36538018
Alignment:
Q  248 aagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtctcataagt 319  Q
    |||||||||||  ||| |||||||||||||||    ||||||||||||| ||||||||||| ||||| ||||    
T  36537951 aagctaaaaacaacttatgaacatgtcataag----ttgtttccataagttctctcaaacaatctcacaagt 36538018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 39505963 - 39506008
Alignment:
Q  212 tgtttttattagctatcctggagagtttatggaaataagctaaaaa 257  Q
    |||||| || |||||| |||||||||||||||||||||||| ||||    
T  39505963 tgttttcataagctattctggagagtttatggaaataagctgaaaa 39506008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 3968827 - 3968783
Alignment:
Q  205 tataatctgtttttattagctatcctggagagtttatggaaataa 249  Q
    ||||| || |||| || ||||||||||||||||||||||||||||    
T  3968827 tataagctattttcataagctatcctggagagtttatggaaataa 3968783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 11208380 - 11208496
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||| |||||| ||||||||| ||| | |||||||  ||||||||| | ||||  ||||||| ||| |||||   |||||| || ||||||| |||  |    
T  11208380 ataagcgcttatatataagataattctacaacaaaagataaaataaactcaaaccgttttcatataaactatatgttgttttcataagctatcttgggta 11208479  T
Q  236 gtttatggaaataagct 252  Q
     ||||||||||||||||    
T  11208480 ttttatggaaataagct 11208496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 314
Target Start/End: Original strand, 17944862 - 17944894
Alignment:
Q  282 gtttgtttccataagctctctcaaacagtctca 314  Q
    |||||||||||||| ||||||||||||||||||    
T  17944862 gtttgtttccataaactctctcaaacagtctca 17944894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 285
Target Start/End: Complemental strand, 18749887 - 18749807
Alignment:
Q  205 tataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||| ||||||| || |||||||  ||| |  ||||||||||||||| ||||| |||| |||||||||| |||| |||||    
T  18749887 tataagctgttttcataagctatcacggaaaacttatggaaataagctgaaaactgcttatgaacatgtcgtaagctgttt 18749807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 249
Target Start/End: Original strand, 22759146 - 22759230
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataa 249  Q
    |||||||  ||||||||||  ||| | ||||||| ||||||| || ||| ||| || |||||||| |||||| ||||||||||||    
T  22759146 aacaaaagataaaataaaggaaaattgttttcatataagctaaaagctgatttcataagctatccaggagagcttatggaaataa 22759230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 46825067 - 46825151
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatg-gaaataagctaaaaa 257  Q
    ||||||||||| ||| | ||||||| ||||| |||| | ||||| || ||||||| ||||| | ||||| |||||||||||||||    
T  46825067 taaaataaagtcaaattgttttcatataagccataaaccgttttcataagctatcttggagtgcttatgagaaataagctaaaaa 46825151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 7e-22; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 174 - 314
Target Start/End: Original strand, 33942119 - 33942257
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| ||||| ||||||||||||||||||  |||||| || ||| ||| | ||||| | ||| |||| |||| ||||| |||| |||||||||    
T  33942119 taaaataaagtcaaactgttttcatgtaagctataagttgttttcataagccatcatagagagctaatgaaaattagctgaaaacagcttatgaacatgt 33942218  T
Q  274 cataagatgtttgtttccataagctctctcaaacagtctca 314  Q
    |||||| ||  | | ||||||||||||||||||||||||||    
T  33942219 cataagttg--tctctccataagctctctcaaacagtctca 33942257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 165 - 284
Target Start/End: Complemental strand, 1939442 - 1939323
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgta-agctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggctt 263  Q
    |||||||  ||||||||||||||||||||||||| |  |||||||| ||||||| || |||||| |||||||| ||||||||||||| | ||||| ||||    
T  1939442 aacaaaagataaaataaagtgaaactattttcatattgagctataa-ctgttttcataagctatactggagagcttatggaaataagttgaaaacagctt 1939344  T
Q  264 ttgaacatgtcataagatgtt 284  Q
     || |||||||||||| ||||    
T  1939343 atggacatgtcataagttgtt 1939323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 163 - 273
Target Start/End: Complemental strand, 22681297 - 22681187
Alignment:
Q  163 aaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggct 262  Q
    |||||||||  ||||| ||||  ||| | ||||||| |||||||||| ||||||| || | ||||||| ||||  ||||||||||||||||||||| |||    
T  22681297 aaaacaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagct 22681198  T
Q  263 tttgaacatgt 273  Q
    | |||||||||    
T  22681197 tatgaacatgt 22681187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 315
Target Start/End: Complemental strand, 1742142 - 1741996
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttt 264  Q
    |||||||| |||||| |||| ||||| |||  || |||| ||||| ||||||| || | ||||| || |||||||||||||||||| | || |  ||||     
T  1742142 aacaaaatataaaatgaagtcaaactctttatatataagatataagctgttttcataatctatcatgaagagtttatggaaataagttgaagatagctta 1742043  T
Q  265 tgaacatgtcataagatgtttgtttccataagctctctcaaacagtctcat 315  Q
    || ||||||||||||    |||||||||||||||||| |||| ||||||||    
T  1742042 tgcacatgtcataag----ttgtttccataagctctcccaaatagtctcat 1741996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 252
Target Start/End: Complemental strand, 17952840 - 17952723
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctgga-g 234  Q
    ||||| |||||| |||||| || ||| | |||||||  ||||||||||| ||||||||||||| ||||||| ||  |||||| || |||||||||||| |    
T  17952840 ataagagcttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataagctatcctggagg 17952741  T
Q  235 agtttatggaaataagct 252  Q
    |||  |||||||||||||    
T  17952740 agtgcatggaaataagct 17952723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 277
Target Start/End: Complemental strand, 18962176 - 18962035
Alignment:
Q  137 taagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagag 236  Q
    ||||||||||||||| || || ||  | |||||||  ||||||||||| ||||| ||||||| |||||||||| || |||| || ||||||| |||||||    
T  18962176 taagtgcttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataagctataaactattttcataagctatcatggagag 18962077  T
Q  237 tttatggaaat-aagctaaaaacggcttttgaacatgtcata 277  Q
      ||||||||| ||||| ||||| ||   |||||||||||||    
T  18962076 actatggaaataaagctgaaaacagcacatgaacatgtcata 18962035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 35485886 - 35485991
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| |||||||||   | ||||||||||  ||||||||| |||||||||| ||||  ||||||||| |||| ||||| |||| ||||||| |    
T  35485886 taaaataaagtcaaactatttcattataagctataagttgtttttataagctatcctgaagagcctatggaaatgagctgaaaacagcttatgaacatat 35485985  T
Q  274 cataag 279  Q
    ||||||    
T  35485986 cataag 35485991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 44458439 - 44458334
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    |||| |||||| || |||||||||||||  |||||| |||||| ||| ||||||| ||||||||||||  |||||||||||||||  ||| || | ||||    
T  44458439 taaactaaagtcaagctattttcatgtatactataagctgtttgtataagctatcatggagagtttatataaataagctaaaaacaacttatggatatgt 44458340  T
Q  274 cataag 279  Q
    ||||||    
T  44458339 cataag 44458334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 10143103 - 10143211
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||||||||||||||||| || ||| | |||||||  |||||| |||| ||||| |||| || ||||||||||  | |||| || ||||||| ||||||    
T  10143103 ataagtgcttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctatcatggaga 10143202  T
Q  236 gtttatgga 244  Q
    |||||||||    
T  10143203 gtttatgga 10143211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 276
Target Start/End: Complemental strand, 10198567 - 10198479
Alignment:
Q  188 actattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcat 276  Q
    ||||||||||| |||| ||||  |||||||||| | ||||||| ||||| ||||||||||||||| | ||| |||| ||||||||||||    
T  10198567 actattttcatataagatataggctgtttttataatctatcctagagagattatggaaataagctgacaacagcttatgaacatgtcat 10198479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 278
Target Start/End: Original strand, 43173191 - 43173295
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| ||| ||||||||| ||||||||| | |||||||||  |||||| ||||||  ||||||||||||| | ||||| || | || ||||||    
T  43173191 taaaataaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgt 43173290  T
Q  274 cataa 278  Q
    |||||    
T  43173291 cataa 43173295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 285
Target Start/End: Complemental strand, 27237938 - 27237883
Alignment:
Q  230 tggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||||||||||||||||||||||||||| |||| || |||||||||||| |||||    
T  27237938 tggagagtttatggaaataagctaaaaacagcttatgtacatgtcataagctgttt 27237883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 285
Target Start/End: Original strand, 43985146 - 43985289
Alignment:
Q  142 gcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttat 241  Q
    ||||||||||||  |||||| | |||||||||||| ||||||| ||| | || |  ||||||||||||| ||||||| | ||||| | || |||| ||||    
T  43985146 gcttatgtataaactacttctataacaaaatttaatataaagttaaattgttatagtgtaagctataatttgtttttgtaagctaccgtgaagagcttat 43985245  T
Q  242 ggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||| ||| | ||||  |||| || |||||||||||| |||||    
T  43985246 ggaaacaagttgaaaaaagcttatggacatgtcataagttgttt 43985289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 136 - 311
Target Start/End: Original strand, 9478230 - 9478401
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||||| ||||||||||| || ||| | ||||  |  ||||||||| | ||| ||||||||| |||||||||  |||| ||  | ||||||| ||||||    
T  9478230 ataagtgtttatgtataagctatttctataacagtagataaaataaactcaaaatattttcatataagctatatgctgtgttcgtaagctatcgtggaga 9478329  T
Q  236 gtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtc 311  Q
    ||| |||||| |||| | ||||| |||| || |||||| ||||| ||||||    ||||| |||||||||||||||    
T  9478330 gttgatggaagtaagatgaaaacagcttatggacatgtaataagttgtttg----cataaactctctcaaacagtc 9478401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 7103584 - 7103499
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgttttt-attagctatcctggagagtttatggaaataagctaaaaac 258  Q
    ||||||||||| ||||| |||| || |||||||||| |||||||| || ||||||| | |||||||| || |||||||||||||||    
T  7103584 taaaataaagtcaaactgttttaatataagctataagctgtttttcataagctatcttagagagtttgtgaaaataagctaaaaac 7103499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 242
Target Start/End: Complemental strand, 37292457 - 37292380
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatg 242  Q
    |||||||  ||||||||||| ||||||||||||| |||||||| |  ||||||  | |||||||||||||||||||||    
T  37292457 aacaaaagataaaataaagtaaaactattttcatataagctattagttgttttcttaagctatcctggagagtttatg 37292380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 253
Target Start/End: Complemental strand, 6167385 - 6167305
Alignment:
Q  173 ttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagcta 253  Q
    |||||||||||||||| |  |||| | |||||||||| |||||||||| ||||||  ||||||  ||||||||||||||||    
T  6167385 ttaaaataaagtgaaattgctttcgtttaagctataagctgtttttataagctattttggagaacttatggaaataagcta 6167305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 29316876 - 29316765
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    |||||||| || ||| | ||||||  ||| |||||| ||||||| || ||||||| ||||||  ||||||||||||||| ||||   ||| |||||||||    
T  29316876 taaaataaggttaaattgttttcacataatctataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaacatgt 29316777  T
Q  274 cataagatgttt 285  Q
    |||||| |||||    
T  29316776 cataagctgttt 29316765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 309
Target Start/End: Original strand, 15120200 - 15120283
Alignment:
Q  222 agctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacag 309  Q
    ||||||| ||||||| ||||  ||||||||| ||||| |||  |||||||||||||||    |||||||||||||||||| |||||||    
T  15120200 agctatcatggagagcttatcaaaataagcttaaaacagctaatgaacatgtcataag----ttgtttccataagctctcccaaacag 15120283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 41817187 - 41817248
Alignment:
Q  224 ctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||||||||||| ||||||||||||||| |||||   || | |||||||||||||||||||    
T  41817187 ctatcctggagagcttatggaaataagctgaaaacaaattatcaacatgtcataagatgttt 41817248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 43205281 - 43205354
Alignment:
Q  177 aataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataag 250  Q
    |||||||  ||||| ||||||| |||| ||||||||||||| || |||||||  |||||| |||||||||||||    
T  43205281 aataaagccaaactgttttcatataagatataatctgttttcataagctatcacggagagcttatggaaataag 43205354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 3067443 - 3067391
Alignment:
Q  211 ctgtttttattagctatcctggagagtttatggaaataagctaaaaacggctt 263  Q
    ||||||| || ||||||| || |||||||||| ||||||||||||||||||||    
T  3067443 ctgttttcataagctatcttgaagagtttatgaaaataagctaaaaacggctt 3067391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 3078709 - 3078657
Alignment:
Q  206 ataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    |||| |||||||||| ||||||| ||||||| || ||||||||||||||||||    
T  3078709 ataagctgtttttataagctatcttggagagcttctggaaataagctaaaaac 3078657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 3673738 - 3673830
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatc 228  Q
    |||||||||||||||| || || ||| | |||||||| ||||||||||| ||| | ||||||| |||| |||||  | |||| ||||||||||    
T  3673738 ataagtgcttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcatataagttataagtttttttcattagctatc 3673830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 285
Target Start/End: Original strand, 5133708 - 5133852
Alignment:
Q  141 tgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagttta 240  Q
    |||||||||||||| || ||| | |||||||  ||||||||||  ||||| |||| || |||| ||||| ||||||| |  || ||||   ||||| |||    
T  5133708 tgcttatgtataagctatttctataacaaaagataaaataaagataaactgtttttatataagatataagctgttttcaaaagttatctaagagagctta 5133807  T
Q  241 tggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    |||||||||||| |||   |||| ||| ||||||||||| |||||    
T  5133808 tggaaataagctgaaagtagcttatgaccatgtcataagttgttt 5133852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 257
Target Start/End: Original strand, 11513858 - 11513950
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaa 257  Q
    |||||||  ||||||||||| ||| | ||||||| ||||||||||  |||||| || ||||||| ||||||  || |||||||||||| ||||    
T  11513858 aacaaaagataaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcatggagaacttttggaaataagctgaaaa 11513950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 279
Target Start/End: Original strand, 12215741 - 12215881
Alignment:
Q  139 agtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtt 238  Q
    |||||||||||||||  || ||| | |||||||  |||||||||||  | |  ||| ||| || ||||||| |||||||||| ||| ||||| ||||| |    
T  12215741 agtgcttatgtataaactatttctacaacaaaagataaaataaagtcgacccgtttccatatatgctataagctgtttttataagccatccttgagagct 12215840  T
Q  239 tatggaaataagctaaaaacggcttttgaacatgtcataag 279  Q
    ||||| |||| | | ||||| |||| || ||||||||||||    
T  12215841 tatgggaatatggtgaaaacagcttatggacatgtcataag 12215881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 244
Target Start/End: Complemental strand, 28803645 - 28803537
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    |||||||||||| |||||| || ||| | |||||||  ||||||||||| |||||  |||||| ||||||| ||  ||||||  | | ||||||||||||    
T  28803645 ataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagctacaagttgttttcttaaactatcctggaga 28803546  T
Q  236 gtttatgga 244  Q
    | |||||||    
T  28803545 gcttatgga 28803537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 319
Target Start/End: Complemental strand, 34652089 - 34651996
Alignment:
Q  222 agctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtctcataagt 319  Q
    ||||||| ||||||| ||||||||||||| | ||||| |||| || ||||||||||||    ||||||| ||||||| |||| ||| |||||| ||||    
T  34652089 agctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataag----ttgtttctataagctttctccaaccgtctcacaagt 34651996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 319
Target Start/End: Complemental strand, 41809282 - 41809205
Alignment:
Q  238 ttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtctcataagt 319  Q
    |||||||||||||||||||||  ||| |||||||||||||||    ||||||||| |||||||  ||| |||||||| ||||    
T  41809282 ttatggaaataagctaaaaacaacttatgaacatgtcataag----ttgtttccacaagctcttacaatcagtctcacaagt 41809205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 285
Target Start/End: Original strand, 32821806 - 32821889
Alignment:
Q  202 agctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    |||||||| ||||||| || |||||||||  |||| |||| ||||||| || ||||| |||| || |||||||||||| |||||    
T  32821806 agctataaactgttttcataagctatcctaaagagcttatagaaataaactgaaaacagcttatggacatgtcataagttgttt 32821889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 285
Target Start/End: Original strand, 33256709 - 33256820
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| ||||| ||||||| ||| |||||| | ||||| || ||| |||||| |||   |||| ||||||||| | ||| | || |||||||||    
T  33256709 taaaataaagtcaaactgttttcatataaactataagcagttttcataagccatcctgaagaccgtatgaaaataagctgagaacagtttatgaacatgt 33256808  T
Q  274 cataagatgttt 285  Q
    |||||| |||||    
T  33256809 cataagctgttt 33256820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 43141840 - 43141915
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataa 249  Q
    |||| |||||| ||| | ||| ||| ||||||||||  |||||| || |||||||||| |||||||||||||||||    
T  43141840 taaagtaaagtcaaattgtttccatataagctataagatgttttcataagctatcctgaagagtttatggaaataa 43141915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 44438940 - 44438829
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| ||||| ||||  |  |||| |||| |||| || || || |||||||||||  || |||||||||||| ||||| | || |||||||||    
T  44438940 taaaataaagtcaaactgtttttgtacaagccataagctgtcttcataagttatcctggagatcttgtggaaataagctgaaaacaggttatgaacatgt 44438841  T
Q  274 cataagatgttt 285  Q
    |||||| |||||    
T  44438840 cataagctgttt 44438829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 285
Target Start/End: Complemental strand, 18179324 - 18179230
Alignment:
Q  191 attttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    |||||||| |||||||||| ||| ||| || ||||||||||||||  ||| | ||||||||| ||||  |||  || ||||||| ||||||||||    
T  18179324 attttcatataagctataagctgctttcataagctatcctggagaacttacgaaaataagctgaaaatagctaatggacatgtcttaagatgttt 18179230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 44439486 - 44439408
Alignment:
Q  149 tataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctat 227  Q
    |||||| || ||||| |||||||| ||||||||||| ||||| ||||  | ||||||||||  ||||||||| ||||||    
T  44439486 tataagttatttccataacaaaatataaaataaagttaaactgtttttgtataagctataaattgtttttataagctat 44439408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 1647263 - 1647316
Alignment:
Q  232 gagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||| ||||||||||||||| ||||| |||| ||| ||||||||||| |||||    
T  1647263 gagagcttatggaaataagctgaaaacagcttatgagcatgtcataagctgttt 1647316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 6993825 - 6993720
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    |||||||| || ||| ||| ||||| |||||||||   |||||| || |||||| || ||||| ||||| |||||||||||||| | ||| || |||||     
T  6993825 taaaataaggtcaaattatattcatataagctataggttgttttcataagctatgcttgagagcttatgaaaataagctaaaaatgacttatggacatgc 6993726  T
Q  274 cataag 279  Q
    ||||||    
T  6993725 cataag 6993720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 285
Target Start/End: Original strand, 25790065 - 25790206
Alignment:
Q  144 ttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatgg 243  Q
    |||||||||| ||| ||| | || ||||  |||| | |||| ||||| ||||||| ||||||| ||  |||||  || | ||||||||||||| |||||     
T  25790065 ttatgtataatatatttctataaaaaaagataaagtgaagtcaaactgttttcatataagctacaaattgtttggataatctatcctggagagcttatga 25790164  T
Q  244 aaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||||| | ||||| ||||  |||||||| ||||| |||||    
T  25790165 aaataagttcaaaacagcttaggaacatgtaataagctgttt 25790206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 278
Target Start/End: Complemental strand, 31228887 - 31228834
Alignment:
Q  225 tatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataa 278  Q
    |||| |||||||||||||||||||| |||||||| |||| |  |||||||||||    
T  31228887 tatcatggagagtttatggaaataacctaaaaacagcttatatacatgtcataa 31228834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 285
Target Start/End: Complemental strand, 8820334 - 8820282
Alignment:
Q  233 agagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    |||| ||||||||||||||| ||||| |||| ||||||||||| ||| |||||    
T  8820334 agagcttatggaaataagctgaaaacagcttgtgaacatgtcagaagctgttt 8820282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 25609726 - 25609810
Alignment:
Q  135 cataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgttttta 219  Q
    |||||||||||||||||||| || ||| | || ||||  ||||||||||| ||  ||||||| | ||||||||||  ||||||||    
T  25609726 cataagtgcttatgtataagctatttctataagaaaagataaaataaagtcaatttattttcgtataagctataagttgttttta 25609810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 28902008 - 28902080
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctata 208  Q
    ||||||||||||||||||| || ||  | |||| || |||||||||| | ||||| ||||||| |||||||||    
T  28902008 ataagtgcttatgtataagctatttttataacataagttaaaataaaattaaactgttttcatataagctata 28902080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 32848898 - 32848958
Alignment:
Q  195 tcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaa 255  Q
    |||| |||||||||| || |||| || |||||| | ||||| |||||||||||||||||||    
T  32848898 tcatataagctataaactattttcataagctataccggagaatttatggaaataagctaaa 32848958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 36863726 - 36863650
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataag 250  Q
    ||||||||||| |||| ||||| || |||| |||||  |||||| || ||||||| ||||||| ||||| |||||||    
T  36863726 taaaataaagtcaaacaatttttatataagttataaattgttttcataagctatcttggagagcttatgaaaataag 36863650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 42817477 - 42817393
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    |||||| |||| || || ||||||| ||||  |||| ||||||| || |||||| ||| |||| |||||||| ||||||||||||    
T  42817477 taaaatgaagtcaagctgttttcatataagtaataaactgttttcataagctattctgaagagcttatggaagtaagctaaaaac 42817393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 43259840 - 43259892
Alignment:
Q  211 ctgtttttattagctatcctggagagtttatggaaataagctaaaaacggctt 263  Q
    ||||||| ||||| |||| || |||| ||||||||||||||||||||| ||||    
T  43259840 ctgttttcattaggtatcttgaagagcttatggaaataagctaaaaacagctt 43259892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 44238109 - 44238053
Alignment:
Q  200 taagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaa 256  Q
    ||||||||||  |||||| |  || |||| |||||||||||||||||||||||||||    
T  44238109 taagctataagttgttttcagaagttatcatggagagtttatggaaataagctaaaa 44238053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 5e-20; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 136 - 258
Target Start/End: Complemental strand, 28769478 - 28769356
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    |||| |||||||||||||| || | | | |||||| | |||||| |||| ||||||||||| | |||||||||| ||||||| || ||||||  ||||||    
T  28769478 ataaatgcttatgtataagctattcctataacaaactataaaattaagtcaaactattttcttataagctataagctgttttcataagctattttggaga 28769379  T
Q  236 gtttatggaaataagctaaaaac 258  Q
    ||||||||||||||||| |||||    
T  28769378 gtttatggaaataagctgaaaac 28769356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 285
Target Start/End: Original strand, 29973013 - 29973162
Alignment:
Q  137 taagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagag 236  Q
    ||||||||||| |||||| || |||   |||| ||  ||||||||||| ||||||||||||  ||||||||||  |||||| || ||||||||| |||||    
T  29973013 taagtgcttatatataagctatttctttaacacaaggtaaaataaagtcaaactattttcacataagctataagttgttttcataagctatccttgagag 29973112  T
Q  237 tttatggaaataagct-aaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||||||||||| || |||| | ||||||| ||||||| |||| |||||    
T  29973113 tttatggaaataaactgaaaaccagcttttggacatgtcgtaagttgttt 29973162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 136 - 285
Target Start/End: Complemental strand, 39551348 - 39551199
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||||| ||||||||||  |||||||| || ||||  ||||||||||  ||||| | |||||  |||||||||  |||||| || |||| |||||||||    
T  39551348 ataagtgtttatgtataacctacttccataataaaagataaaataaagctaaactgtcttcatacaagctataagttgttttcataagctttcctggaga 39551249  T
Q  236 gtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    | ||||  ||||||| ||||||| ||||||| |||||||||||| |||||    
T  39551248 gcttataaaaataagttaaaaacagcttttggacatgtcataagttgttt 39551199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 258
Target Start/End: Original strand, 4558730 - 4558851
Alignment:
Q  137 taagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagag 236  Q
    |||||| ||||||||||| || ||| | || ||||  ||||||||||| ||| ||||||||| || ||||||| ||||||  || ||||||||| |||||    
T  4558730 taagtgtttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgtttccataagctatcctagagag 4558829  T
Q  237 tttatggaaataagctaaaaac 258  Q
     |||||||||||| ||||||||    
T  4558830 cttatggaaataaactaaaaac 4558851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 312
Target Start/End: Complemental strand, 30191242 - 30191108
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| |||||  |  ||| ||| |||||| || |||| || |||||||||| |  ||||||||||||||||| |||||   ||||||||||||    
T  30191242 taaaataaagtcaaactgctcacatataatctataagctattttgataagctatcctgaaatgtttatggaaataagctgaaaacaagttttgaacatgt 30191143  T
Q  274 cataagatgtttgtttccataagctctctcaaacagtct 312  Q
    ||||||    |||||||||||||||||| ||||||||||    
T  30191142 cataag----ttgtttccataagctctcccaaacagtct 30191108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 211 - 279
Target Start/End: Original strand, 20672756 - 20672824
Alignment:
Q  211 ctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataag 279  Q
    |||||||||| ||||||||||||||| ||||| ||||||||| ||||| |||| |||||||||||||||    
T  20672756 ctgtttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataag 20672824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 42215407 - 42215296
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| ||||| ||||  | ||| |||||| || |||| ||  |||||||||||||| ||||| ||||||||| ||||| |||| |||||| ||    
T  42215407 taaaataaagtcaaactgtttttgtataatctataacctattttcatatgctatcctggagagcttatgtaaataagctgaaaacagcttatgaacaagt 42215308  T
Q  274 cataagatgttt 285  Q
    |||||| |||||    
T  42215307 cataagctgttt 42215296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 193 - 263
Target Start/End: Original strand, 31705073 - 31705143
Alignment:
Q  193 tttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggctt 263  Q
    |||||| |||||||||| ||||||| || |||| |||| ||||||||||||||||||||| ||||| ||||    
T  31705073 tttcatataagctataagctgttttcataagctgtccttgagagtttatggaaataagctgaaaacagctt 31705143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 136 - 258
Target Start/End: Complemental strand, 38036251 - 38036129
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||||||||||||||||  || ||    |||||||  ||||||||| | ||| | ||||  |||||||||||| ||||||| |||||||||| ||||||    
T  38036251 ataagtgcttatgtataaactatttatttaacaaaaaataaaataaattcaaattgtttttgtgtaagctataaactgttttgattagctatcttggaga 38036152  T
Q  236 gtttatggaaataagctaaaaac 258  Q
    | |||| |||||||||| |||||    
T  38036151 gcttattgaaataagctgaaaac 38036129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 205 - 319
Target Start/End: Complemental strand, 11569527 - 11569417
Alignment:
Q  205 tataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctca 304  Q
    ||||| ||||||| || ||||||| ||||||| || || ||||||||| |||||  ||| || ||||||||||||     |||||||||||||||||| |    
T  11569527 tataagctgttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataag----ctgtttccataagctctctta 11569432  T
Q  305 aacagtctcataagt 319  Q
    |||||||||| ||||    
T  11569431 aacagtctcacaagt 11569417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 258
Target Start/End: Complemental strand, 42370471 - 42370378
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    |||||||| |||| |||||| ||||||||||  | | |||||||| ||||| | || ||||||| || |||||||||||||||||||| |||||    
T  42370471 aacaaaatataaagtaaagtcaaactatttttttatgagctataaactgttctcataagctatcatgaagagtttatggaaataagctgaaaac 42370378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 10075647 - 10075551
Alignment:
Q  179 taaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtca 275  Q
    |||||| |||||||||| || |||| ||||| || |||| || ||||||||| ||||| ||||| ||||||||||||| | |||| | |||||||||    
T  10075647 taaagtcaaactatttttatataagttataagctattttcataagctatcctagagagcttatgaaaataagctaaaagcagcttgtcaacatgtca 10075551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 41606953 - 41606893
Alignment:
Q  225 tatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    |||||| ||||| ||||||||||||||| |||||  ||||||||||||||||||| |||||    
T  41606953 tatcctagagagcttatggaaataagctgaaaacaacttttgaacatgtcataagctgttt 41606893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 2093248 - 2093331
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaa 257  Q
    ||||||||||| |||   ||||| | ||||||||||  |||||| ||||||||||||| || |||||| |||||||||||||||    
T  2093248 taaaataaagtcaaatggttttcttttaagctataagttgttttcattagctatcctgaagcgtttatagaaataagctaaaaa 2093331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 6864560 - 6864477
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaa 257  Q
    ||||||||||| |||||||||||||||||| |||||  |||||| || ||||||  ||||||| ||  ||||||||||| ||||    
T  6864560 taaaataaagtcaaactattttcatgtaagttataagttgttttcataagctattttggagagcttgaggaaataagctgaaaa 6864477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 279
Target Start/End: Original strand, 11795003 - 11795166
Alignment:
Q  116 cttaattaagtgcttaaggcataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtt 215  Q
    ||||||||||   |||| |||| | |||||||||||||| |  ||| |  ||||||  || |||||||| | ||| ||||||| |||| ||||| ||| |    
T  11795003 cttaattaagcagttaaagcattaatgcttatgtataagctttttctatgacaaaacatacaataaagtcacactgttttcatataagttataagctgat 11795102  T
Q  216 tttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataag 279  Q
    || || ||||||  ||||||| ||||||||||||||| ||||| | || || ||||||||||||    
T  11795103 ttcataagctattatggagagcttatggaaataagctgaaaacaggttatggacatgtcataag 11795166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 29262975 - 29262864
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| ||| ||||||||| |||||| ||| ||| ||| ||| || ||||| ||||||||| |||||| |  | ||||  |||| |||||||||    
T  29262975 taaaataaagtcaaattattttcatataagctgtaagctgatttcatttgcaatcctagagagtttacggaaattacttgaaaatagcttatgaacatgt 29262876  T
Q  274 cataagatgttt 285  Q
    |||||| |||||    
T  29262875 cataagttgttt 29262864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 244
Target Start/End: Original strand, 34770824 - 34770931
Alignment:
Q  137 taagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagag 236  Q
    |||||||||||||| ||  || |||||  ||||||  ||||||||||| ||| | ||||||| ||||||||||  |||||| || ||||||||| |||||    
T  34770824 taagtgcttatgtaaaaactatttccattacaaaagataaaataaagtcaaattgttttcatttaagctataagttgttttcataagctatcctagagag 34770923  T
Q  237 tttatgga 244  Q
    || |||||    
T  34770924 ttcatgga 34770931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 250
Target Start/End: Complemental strand, 44865648 - 44865589
Alignment:
Q  191 attttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataag 250  Q
    |||||||| |||||||||| ||| |||||| |||||| || |||||||||||||||||||    
T  44865648 attttcatataagctataagctggttttataagctatactagagagtttatggaaataag 44865589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 3254235 - 3254305
Alignment:
Q  215 ttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    |||||| |||||||||  ||||| ||| |||||||||| ||||| |||| ||||||||||||||| |||||    
T  3254235 ttttataagctatcctatagagtgtatagaaataagctgaaaacagcttatgaacatgtcataagctgttt 3254305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 312
Target Start/End: Original strand, 5069697 - 5069800
Alignment:
Q  205 tataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctca 304  Q
    ||||| ||||||| || || |||| | || || ||||| ||||||||| |||| | ||| ||||||||| ||||||||||    ||||||||||||||||    
T  5069697 tataagctgttttcataagatatcttcgaaagcttatgaaaataagctgaaaatgacttatgaacatgttataagatgtt----tccataagctctctca 5069792  T
Q  305 aacagtct 312  Q
    ||||||||    
T  5069793 aacagtct 5069800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 258
Target Start/End: Complemental strand, 11188294 - 11188172
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||||||||||||||||| |  ||| | |||||||  |||||||||   |||||||||| || | || ||||| || |||| || ||||||||| ||||    
T  11188294 ataagtgcttatgtataagttgtttctataacaaaagataaaataaaaccaaactatttttatattagttataaactattttgataagctatcctagaga 11188195  T
Q  236 gtttatggaaataagctaaaaac 258  Q
    |||||||| ||||| || |||||    
T  11188194 gtttatggtaataaactgaaaac 11188172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 9836955 - 9836882
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaat 247  Q
    |||| |||||| ||||||||||||| |||| || || ||||||| || ||||||| ||||||| ||||||||||    
T  9836955 taaagtaaagtcaaactattttcatataagttacaacctgttttcataagctatcttggagagcttatggaaat 9836882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 12361161 - 12361266
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    |||||| |||| ||| | ||||||| |||||||||| ||||||| || || ||| | |||||| | ||||||||||| | ||||| |||| || ||||||    
T  12361161 taaaatgaagtcaaattgttttcatataagctataagctgttttcataagttattcaggagagctaatggaaataagttgaaaacagcttatggacatgt 12361260  T
Q  274 cataag 279  Q
    ||||||    
T  12361261 cataag 12361266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 13652147 - 13652260
Alignment:
Q  137 taagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagag 236  Q
    |||||||||||||||||| || ||| | | |||||  |  ||| |||||||| | ||||||| |||| |||||  ||||||||| |||||| ||||||||    
T  13652147 taagtgcttatgtataagctatttctatagcaaaagatggaatgaagtgaaattgttttcatataagttataaattgtttttataagctattctggagag 13652246  T
Q  237 tttatggaaataag 250  Q
     ||| |||||||||    
T  13652247 cttaaggaaataag 13652260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 13710790 - 13710903
Alignment:
Q  137 taagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagag 236  Q
    |||||||||||||||||| || ||| | | |||||  |  ||| |||||||| | ||||||| |||| |||||  ||||||||| |||||| ||||||||    
T  13710790 taagtgcttatgtataagctatttctatagcaaaagatggaatgaagtgaaattgttttcatataagttataaattgtttttataagctattctggagag 13710889  T
Q  237 tttatggaaataag 250  Q
     ||| |||||||||    
T  13710890 cttaaggaaataag 13710903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 276
Target Start/End: Original strand, 26056016 - 26056157
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||||| ||||||||||| || ||| |||||||||  ||||||| ||  ||||| || |||  |||||||| | || ||||||| ||||||| |||| |    
T  26056016 ataagtgtttatgtataagctaattctaaaacaaaagataaaatatagccaaactgttctcaaataagctattaactatttttataagctatcatggaaa 26056115  T
Q  236 gtttatggaaataagctaaaaacggcttttg-aacatgtcat 276  Q
      || ||| |||||||||||||| |||| || ||||||||||    
T  26056116 acttgtgggaataagctaaaaacagcttatgaaacatgtcat 26056157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 258
Target Start/End: Complemental strand, 30277315 - 30277262
Alignment:
Q  205 tataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    ||||| ||||||| || ||||||||| ||||||||||||||||||||| |||||    
T  30277315 tataagctgttttcataagctatcctagagagtttatggaaataagctgaaaac 30277262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 36338063 - 36337966
Alignment:
Q  112 acaacttaattaagtgcttaaggcataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataa 209  Q
    |||||||||||| ||| |||  ||||||||||||| |||||||||| ||  | |||||| | | ||||||||| ||||||||| | | ||||||||||    
T  36338063 acaacttaattaggtggttatagcataagtgcttaagtataagatatttttataacaaattatcaaataaagttaaactatttacgtataagctataa 36337966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 209
Target Start/End: Original strand, 42597312 - 42597405
Alignment:
Q  116 cttaattaagtgcttaaggcataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataa 209  Q
    |||||| ||||||||| |  |||||| |||||||||||| || ||| | |||||||  ||||||||||| ||| | |||||||| |||||||||    
T  42597312 cttaatcaagtgcttatgctataagtacttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataa 42597405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 926511 - 926555
Alignment:
Q  241 tggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    |||||||||||| |||||||||| ||||||||||||||| |||||    
T  926511 tggaaataagctgaaaacggcttatgaacatgtcataagttgttt 926555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 6509404 - 6509328
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataag 250  Q
    ||||||||||| ||| | | || || |||||||||| ||||||| || ||||||||||||||| |||| ||||||||    
T  6509404 taaaataaagtcaaattgtatttatataagctataagctgttttcataagctatcctggagagcttattgaaataag 6509328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 7918874 - 7918790
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    ||||||||||| ||| | ||||| ||||||||||||  |||||| || ||||||| || |||| || |||||||||||| |||||    
T  7918874 taaaataaagttaaatttttttcttgtaagctataagttgttttcataagctatcttgtagagcttgtggaaataagctgaaaac 7918790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 25869318 - 25869262
Alignment:
Q  223 gctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataag 279  Q
    |||||| ||||||||||||||||||||||| |||||  ||| || ||||||||||||    
T  25869318 gctatcatggagagtttatggaaataagctgaaaacaacttatggacatgtcataag 25869262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 319
Target Start/End: Original strand, 26410301 - 26410390
Alignment:
Q  227 tcctggagagtttatggaaat-aagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtctcataagt 319  Q
    |||||||||| |||||||||| ||||||||||| |||| || ||||||||| ||     ||||||||||||||||| ||| |||||||| ||||    
T  26410301 tcctggagagcttatggaaataaagctaaaaacagcttctggacatgtcatgag----ctgtttccataagctctcccaagcagtctcagaagt 26410390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 263
Target Start/End: Complemental strand, 26716575 - 26716450
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||||||||||||||||| |||||| | ||||| |||  ||||||||| ||| |||||| |   |||||||||  | |||| || | ||||||| ||||    
T  26716575 ataagtgcttatgtataagctacttctataacaagatt--aaataaagtcaaattatttttacaaaagctataagattttttaatgacctatcctagaga 26716478  T
Q  236 gtttatggaaataagctaaaaacggctt 263  Q
    | ||| ||||||||||| ||||| ||||    
T  26716477 ggttacggaaataagctgaaaacagctt 26716450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 43504747 - 43504831
Alignment:
Q  201 aagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    |||||||||  ||||||||| ||||||| ||||||  ||||||||||||||| ||||| |||| | |||| ||| |||| |||||    
T  43504747 aagctataagatgtttttataagctatcttggagaacttatggaaataagctgaaaacagcttataaacaagtcgtaagttgttt 43504831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 285
Target Start/End: Original strand, 11183542 - 11183625
Alignment:
Q  202 agctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    |||||||| ||||||| |  ||||| ||||||||| ||||||||||||||| ||||| |||| |  |||| ||||||| |||||    
T  11183542 agctataagctgttttcacaagctaccctggagagcttatggaaataagctgaaaacagcttatagacatatcataagttgttt 11183625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 27728122 - 27728039
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaa 257  Q
    ||||||||||| ||||||||||||| |||  ||| |  |||||| || ||||||||| ||| | | ||||||||||||||||||    
T  27728122 taaaataaagtcaaactattttcatataaagtattagttgttttcataagctatcctagagggatgatggaaataagctaaaaa 27728039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 35869768 - 35869859
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctat 227  Q
    |||||| ||||||||||||  | ||| | |||||||| ||||||||| | |||| |||||||| ||||||||||  |||||| || ||||||    
T  35869768 ataagttcttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttgttttcataagctat 35869859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 7645965 - 7646031
Alignment:
Q  192 ttttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    ||||||||||||||||||  |||||| || ||||| |||| | || ||||||||||||||| |||||    
T  7645965 ttttcatgtaagctataagttgttttcataagctaacctgtaaagcttatggaaataagctgaaaac 7646031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 313
Target Start/End: Complemental strand, 7918499 - 7918412
Alignment:
Q  222 agctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtctc 313  Q
    ||||||| ||||||| |||| |||||||| |  |||| |||| |||||||||| ||||    |||||| ||||||||||| |||||||||||    
T  7918499 agctatcttggagagcttattgaaataagttggaaacagcttatgaacatgtcttaag----ttgttttcataagctctcccaaacagtctc 7918412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 200 - 258
Target Start/End: Original strand, 8062324 - 8062382
Alignment:
Q  200 taagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    |||||||||| ||||||| || ||||||| | ||||| ||||||||||||||| |||||    
T  8062324 taagctataagctgttttcataagctatcttagagagattatggaaataagctgaaaac 8062382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 279
Target Start/End: Original strand, 21653041 - 21653155
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttt 264  Q
    |||||||  ||||||||||| ||| |  |||| |||| |||| ||  || ||| |||||||||| ||||||| ||||| ||||||||| ||||  ||||     
T  21653041 aacaaaagataaaataaagttaaattgatttcgtgtaggctacaaattgctttcattagctatcttggagagcttatgaaaataagctgaaaatagctta 21653140  T
Q  265 tgaacatgtcataag 279  Q
    ||||| |||||||||    
T  21653141 tgaacgtgtcataag 21653155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 308
Target Start/End: Original strand, 29973168 - 29973251
Alignment:
Q  222 agctatcctggagagtttatggaaataagctaaaaacg-gcttttgaacatgtcataagatgtttgtttccataagctctctcaaaca 308  Q
    ||||||||| |||| ||||||||||||| || |||||  ||||||| ||||||  ||||    |||||||||||||||||||||||||    
T  29973168 agctatccttgagaatttatggaaataaactgaaaaccagcttttggacatgttgtaag----ttgtttccataagctctctcaaaca 29973251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 200 - 314
Target Start/End: Complemental strand, 30988067 - 30987956
Alignment:
Q  200 taagctataatctgtttttattagctatcctggagagtttatggaaataagct-aaaaacggcttttgaacatgtcataagatgtttgtttccataagct 298  Q
    |||| ||||| |||||||| | ||||||| | ||| | |||||||| ||| || |||||  |||| || ||||||||||||    |||||||||||||||    
T  30988067 taagttataagctgtttttgtaagctatctttgagggcttatggaactaaactgaaaaatagcttatggacatgtcataag----ttgtttccataagct 30987972  T
Q  299 ctctcaaacagtctca 314  Q
    ||||||||||| ||||    
T  30987971 ctctcaaacagactca 30987956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 240
Target Start/End: Original strand, 31884527 - 31884629
Alignment:
Q  138 aagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagt 237  Q
    |||||| |||||||||| || ||| | |||||||| |||||| || |  || | ||||||| ||||||||||  |||||| || ||||||| ||||||||    
T  31884527 aagtgcatatgtataagttatttctataacaaaatataaaatcaaattgaattgttttcatataagctataaattgttttcataagctatcatggagagt 31884626  T
Q  238 tta 240  Q
    |||    
T  31884627 tta 31884629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 39881815 - 39881769
Alignment:
Q  212 tgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    ||||||||| ||||||| ||||||| ||||||||||||||| |||||    
T  39881815 tgtttttataagctatcatggagagcttatggaaataagctgaaaac 39881769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 2235698 - 2235653
Alignment:
Q  233 agagtttatggaaataagctaaaaacggcttttgaacatgtcataa 278  Q
    |||| |||||||||| ||||||||||| ||| ||||||||||||||    
T  2235698 agagcttatggaaatgagctaaaaacgacttatgaacatgtcataa 2235653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 279
Target Start/End: Complemental strand, 2458619 - 2458562
Alignment:
Q  222 agctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataag 279  Q
    ||||||||| ||||| |||||||||||| || ||||| |||| |||||||| ||||||    
T  2458619 agctatcctagagagcttatggaaataaactgaaaacagcttatgaacatgccataag 2458562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 11185236 - 11185301
Alignment:
Q  220 ttagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||||||| ||||||| | ||||||||||| | |||||  ||| ||||||||| |||||||||||    
T  11185236 ttagctatcatggagagctgatggaaataagttgaaaacaacttatgaacatgttataagatgttt 11185301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 12225037 - 12224976
Alignment:
Q  137 taagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcat 198  Q
    |||| ||||||||||||| || ||| || ||||||  ||||||||||| |||||||||||||    
T  12225037 taagagcttatgtataagttatttctaagacaaaagataaaataaagtcaaactattttcat 12224976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 30013189 - 30013270
Alignment:
Q  176 aaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaa 257  Q
    |||| |||| ||||| ||| ||| |||||||||| ||||||| || |||||||||| |||  | ||||||||||||| ||||    
T  30013189 aaattaagtcaaactgtttccatataagctataagctgttttcataagctatcctgtagaactaatggaaataagctgaaaa 30013270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 2488037 - 2487968
Alignment:
Q  246 ataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtctcataagt 319  Q
    ||||||||||||| | |||||||||||| |||||    |||||| |||||| |||| |||||||||||| ||||    
T  2488037 ataagctaaaaacagtttttgaacatgttataag----ttgttttcataagttctcccaaacagtctcacaagt 2487968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 2492958 - 2493010
Alignment:
Q  227 tcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataag 279  Q
    |||||||| |||||||||||||||| ||||||  ||| ||||||||| |||||    
T  2492958 tcctggagggtttatggaaataagcaaaaaacaacttatgaacatgttataag 2493010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 5227530 - 5227586
Alignment:
Q  200 taagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaa 256  Q
    |||||||||| |||||||| | ||||||| || |||| ||||| |||||||||||||    
T  5227530 taagctataagctgtttttgtaagctatcatgaagagcttatgaaaataagctaaaa 5227586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 319
Target Start/End: Original strand, 7853686 - 7853722
Alignment:
Q  283 tttgtttccataagctctctcaaacagtctcataagt 319  Q
    |||||||||||||||| |||||||| |||||||||||    
T  7853686 tttgtttccataagctttctcaaacggtctcataagt 7853722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 13410326 - 13410262
Alignment:
Q  144 ttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctata 208  Q
    ||||||||||  |||||  | ||||||| ||||||||| || ||||||||||||| |||||||||    
T  13410326 ttatgtataaactacttttacaacaaaagttaaaataatgttaaactattttcatataagctata 13410262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 319
Target Start/End: Original strand, 21130690 - 21130722
Alignment:
Q  287 tttccataagctctctcaaacagtctcataagt 319  Q
    |||||||||||||||||||||||||||| ||||    
T  21130690 tttccataagctctctcaaacagtctcacaagt 21130722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 26215427 - 26215487
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttc 196  Q
    ||||| ||||||||||||| || ||| | |||||||  ||||||||||| |||||||||||    
T  26215427 ataagcgcttatgtataagctatttctataacaaaagataaaataaagttaaactattttc 26215487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 29169185 - 29169121
Alignment:
Q  187 aactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagc 251  Q
    |||| ||||||| | ||||| || |||||||| | || ||||||| |||||||||||||||||||    
T  29169185 aacttttttcatatgagctacaagctgtttttgtaagttatcctgaagagtttatggaaataagc 29169121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 310
Target Start/End: Complemental strand, 31875637 - 31875564
Alignment:
Q  233 agagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagt 310  Q
    |||| ||||| ||||||| | |||| ||||| || ||||||||||||    ||||||||||||||| |||||||||||    
T  31875637 agagcttatgaaaataagttgaaaatggcttatggacatgtcataag----ttgtttccataagctttctcaaacagt 31875564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 278
Target Start/End: Original strand, 34849072 - 34849176
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| | | ||||||  | |||| ||||| ||||| | || |||| || || |||  |||||||||| |||| |||||||||| |||||||||    
T  34849072 taaaataaagtcacattatttttgtataagatataagctgttatcataagctttcttgtagaacttatggaaatcagctgaaaacggcttatgaacatgt 34849171  T
Q  274 cataa 278  Q
    |||||    
T  34849172 cataa 34849176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 43709260 - 43709316
Alignment:
Q  192 ttttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaata 248  Q
    |||||| |||||||||||  |||||| || ||||||||||||||| ||||| |||||    
T  43709260 ttttcacgtaagctataagttgttttcatgagctatcctggagagcttatgaaaata 43709316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 314
Target Start/End: Original strand, 14295466 - 14295611
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttt 264  Q
    |||||||  ||||||||||| ||||| ||||||| |||||||||| |||||||  | ||||||||||||||| || | ||| |||||| ||||| ||||     
T  14295466 aacaaaagataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctatcctggagagcttttagaagtaagctgaaaacagctta 14295565  T
Q  265 tgaacatgtcataagatgtttgtttccataagctctctcaaacagtctca 314  Q
    |  |||| |||||||     ||||| |||||||||||||| |||||||||    
T  14295566 tcgacatatcataag----ctgttttcataagctctctcagacagtctca 14295611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 35135815 - 35135728
Alignment:
Q  122 taagtgcttaaggcataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataa 209  Q
    |||||||||||   ||||||| |||||||||||||| ||| | |||||||  ||||||||||| ||||||||||||| ||||||||||    
T  35135815 taagtgcttaacatataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagctataa 35135728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 214 - 314
Target Start/End: Original strand, 2468440 - 2468537
Alignment:
Q  214 tttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtctc 313  Q
    ||||||| |||||||||| ||||||||||||| |||||| ||||| |||| || ||||||||||| |   ||||||||||||| ||||  ||||||||||    
T  2468440 tttttataagctatcctgaagagtttatggaagtaagctcaaaacagcttatggacatgtcataaaa---ttgtttccataagttctccaaaacagtctc 2468536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 319
Target Start/End: Complemental strand, 37611278 - 37611175
Alignment:
Q  212 tgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtc 311  Q
    |||||| || ||||||| ||||||| |||||||||||| || ||||| |||| ||||||||||| |||    |||||| |||||||||||||||||| ||    
T  37611278 tgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaag----ttgttttcataagctctctcaaacaatc 37611183  T
Q  312 tcataagt 319  Q
    ||| ||||    
T  37611182 tcacaagt 37611175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 319
Target Start/End: Complemental strand, 37788008 - 37787905
Alignment:
Q  212 tgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtc 311  Q
    |||||| || ||||||| ||||||| |||||||||||| || ||||| |||| ||||||||||| |||    |||||| |||||||||||||||||| ||    
T  37788008 tgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaag----ttgttttcataagctctctcaaacaatc 37787913  T
Q  312 tcataagt 319  Q
    ||| ||||    
T  37787912 tcacaagt 37787905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 285
Target Start/End: Original strand, 39105395 - 39105545
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||| ||||||||||||| || ||| | | | |||| | |||| |||| ||| | ||||| | |||||||||||||||||| || ||||||| ||||||    
T  39105395 ataagcgcttatgtataagctatttctatagctaaatatgaaatgaagttaaattgttttcgtataagctataatctgttttcataagctatcttggaga 39105494  T
Q  236 gtttatggaaataagctaaaaacggcttttgaac-atgtcataagatgttt 285  Q
      ||||| ||||||||||||||  |||| ||||| |||||||||| |||||    
T  39105495 acttatgaaaataagctaaaaatagcttatgaacaatgtcataagctgttt 39105545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 16889671 - 16889788
Alignment:
Q  141 tgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagttta 240  Q
    |||||||||||||| || ||||| |||||||  |||| | |||| ||||| |||| ||  ||||||||| ||||||| || |||||| || |||||||||    
T  16889671 tgcttatgtataagctatttccataacaaaagataaacttaagtcaaactgtttttatagaagctataagctgttttcataagctatgctagagagttta 16889770  T
Q  241 tggaaataagctaaaaac 258  Q
    ||||||||| || |||||    
T  16889771 tggaaataatctgaaaac 16889788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 285
Target Start/End: Original strand, 17368647 - 17368756
Alignment:
Q  176 aaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtca 275  Q
    |||| |||| ||||| ||||  ||||| ||||||  |||||| || ||||||| ||||||| ||||||||||||||| ||||| || | |||||||||||    
T  17368647 aaatgaagtcaaactgtttttgtgtaatctataagttgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtca 17368746  T
Q  276 taagatgttt 285  Q
    |||| |||||    
T  17368747 taagttgttt 17368756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 314
Target Start/End: Complemental strand, 37526282 - 37526164
Alignment:
Q  192 ttttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttcc 291  Q
    ||||||| ||||||||||  |||||| || || | | |||||||| ||||||||||||||| ||||| |||| | |||||||||||    | |||| | |    
T  37526282 ttttcatataagctataagttgttttcataagttgttctggagagcttatggaaataagctgaaaacagcttattaacatgtcata----ggttgtattc 37526187  T
Q  292 ataagctctctcaaacagtctca 314  Q
    |||||||||||||||||||||||    
T  37526186 ataagctctctcaaacagtctca 37526164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 314
Target Start/End: Complemental strand, 37588443 - 37588325
Alignment:
Q  192 ttttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttcc 291  Q
    ||||||| ||||||||||  |||||| || || ||| |||||||| ||||||||||||||| ||||| |||| | ||||| |||||    | |||| | |    
T  37588443 ttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcttattaacatttcata----ggttgtattc 37588348  T
Q  292 ataagctctctcaaacagtctca 314  Q
    |||||||||||||||||||||||    
T  37588347 ataagctctctcaaacagtctca 37588325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 279
Target Start/End: Complemental strand, 17258983 - 17258879
Alignment:
Q  175 aaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtc 274  Q
    |||||||||| ||||||||||| |  || | |||| ||||||| || | |||||||| |||| ||||| ||||||||| ||||| |||| ||||||||||    
T  17258983 aaaataaagtcaaactattttcgtacaatcaataagctgttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaacatgtc 17258884  T
Q  275 ataag 279  Q
    |||||    
T  17258883 ataag 17258879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 142 - 307
Target Start/End: Original strand, 32172590 - 32172751
Alignment:
Q  142 gcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttat 241  Q
    ||||||||||||  || ||| | |||||||  |||||| |||| ||  | ||| ||| |||||||||| ||||||| || ||||||| || |||  | ||    
T  32172590 gcttatgtataaactatttctacaacaaaagataaaatgaagtcaagttgtttacatataagctataagctgttttcataagctatcatgaagaactaat 32172689  T
Q  242 ggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaac 307  Q
    ||||||||||| |||| ||||| || ||||||||||||    |||||||||||||||||| |||||    
T  32172690 ggaaataagctgaaaatggcttatggacatgtcataag----ttgtttccataagctctcccaaac 32172751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 285
Target Start/End: Complemental strand, 36542371 - 36542272
Alignment:
Q  186 aaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||| || |||| |||||||||| ||| ||  || ||||||||| ||||| || |||||||||| ||||||| |||| || ||||||||||||||||||    
T  36542371 aaactgttctcatataagctataagctgattccataagctatcctagagagcttgtggaaataagttaaaaacagcttctggacatgtcataagatgttt 36542272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 136 - 241
Target Start/End: Original strand, 3951548 - 3951651
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    |||||||||||||||||| ||| ||  | |||||  |||||||| || | ||| ||||||||| | |||||||| |||||||||| ||||||||||||||    
T  3951548 ataagtgcttatgtataaaatatttatacaacaa--tttaaaatgaaatcaaattattttcatattagctataagctgtttttataagctatcctggaga 3951645  T
Q  236 gtttat 241  Q
    | ||||    
T  3951646 gattat 3951651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 136 - 257
Target Start/End: Original strand, 29588811 - 29588931
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||||||||||||||||| || ||| | |||||||| |||||||| |  ||| | ||||||| ||||||||||  ||||||  | ||||||  || |||    
T  29588811 ataagtgcttatgtataagctatttctataacaaaatataaaataatg-aaaattgttttcatataagctataaagtgttttcgtaagctatgttgaaga 29588909  T
Q  236 gtttatggaaataagctaaaaa 257  Q
    ||||||||||||||||| ||||    
T  29588910 gtttatggaaataagctgaaaa 29588931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 310
Target Start/End: Complemental strand, 28586876 - 28586735
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttt 264  Q
    |||||||  ||||||||||| ||||| ||||||| |||  ||||| ||||||| |  ||||||||| ||||| |||| |||||||||| ||||| ||||     
T  28586876 aacaaaagataaaataaagtcaaactgttttcatataaattataagctgttttgacgagctatcctagagagcttatcgaaataagctgaaaacagctta 28586777  T
Q  265 tgaacatgtcataagatgtttgtttccataagctctctcaaacagt 310  Q
     | | ||||||||||     | ||||||||||||||| ||||||||    
T  28586776 cggatatgtcataag----ctatttccataagctctcccaaacagt 28586735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 29845018 - 29844970
Alignment:
Q  204 ctataatctgtttttattagctatcctggagagtttatggaaataagct 252  Q
    |||||| |||||||||||||||| ||||||||| |||||||||||||||    
T  29845018 ctataagctgtttttattagctaccctggagagcttatggaaataagct 29844970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 279
Target Start/End: Complemental strand, 36774771 - 36774703
Alignment:
Q  211 ctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataag 279  Q
    |||||||||| ||||||||||||||| ||||||||||||||| ||| |  |||| | ||||||||||||    
T  36774771 ctgtttttataagctatcctggagagcttatggaaataagctgaaaccatctttaggacatgtcataag 36774703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 285
Target Start/End: Complemental strand, 41957551 - 41957441
Alignment:
Q  175 aaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtc 274  Q
    ||||| |||| ||| | |||||||||||| ||||| ||||||| || ||||||||| ||||  ||||| ||||||| | |||||  ||| || |||||||    
T  41957551 aaaatgaagttaaattgttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtc 41957452  T
Q  275 ataagatgttt 285  Q
    ||||| |||||    
T  41957451 ataagctgttt 41957441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 319
Target Start/End: Original strand, 4855605 - 4855805
Alignment:
Q  112 acaacttaattaagtgcttaaggcataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatc 211  Q
    ||||||||||||| | ||||  |||||||| ||||||||| || || ||  | |||||||  ||||||||||| ||| | || |||| |||| |||||      
T  4855605 acaacttaattaaatacttatagcataagtacttatgtattagctatttttataacaaaaaataaaataaagttaaattgttatcatataagttataagt 4855704  T
Q  212 tgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagtc 311  Q
    |||||| || | ||||||   |||| |||  |||||||||  ||||| |||| ||||||||||||||       ||| | ||||||||||||||||||||    
T  4855705 tgttttcataaactatcccaaagagcttacagaaataagccgaaaacagcttctgaacatgtcataa-------gttgctataagctctctcaaacagtc 4855797  T
Q  312 tcataagt 319  Q
    ||| ||||    
T  4855798 tcacaagt 4855805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 32408677 - 32408616
Alignment:
Q  190 tattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagc 251  Q
    ||||||||| |||||||||| || |||| || |||||||||| |||| ||||||||||||||    
T  32408677 tattttcatataagctataaactattttcataagctatcctgaagagcttatggaaataagc 32408616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 312
Target Start/End: Original strand, 35960383 - 35960516
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    ||||||||||| ||||||||| ||| ||| ||||||  || ||| || |||||||||||| ||  ||  ||||||||||||||||  ||| || ||||||    
T  35960383 taaaataaagtcaaactattt-catataaactataagttgatttcataagctatcctggaaagcgtaaagaaataagctaaaaacatcttatggacatgt 35960481  T
Q  274 cataagatgtttgtttccataagctctctcaaacagtct 312  Q
    | ||||    ||| ||||||||||||||||||| |||||    
T  35960482 cgtaag----ttgcttccataagctctctcaaatagtct 35960516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 6183429 - 6183497
Alignment:
Q  190 tattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    |||||||||||||||||||| |||| || || |||| |  ||||||| ||||||||||||||| |||||    
T  6183429 tattttcatgtaagctataagctgtattcataagctgttttggagagcttatggaaataagctgaaaac 6183497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 26516369 - 26516445
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataag 250  Q
    ||||||||||| |||||| |||||| |||| ||||| ||||||| || |||||||  | ||| ||||||||||||||    
T  26516369 taaaataaagtcaaactactttcatataagttataaactgttttcataagctatctagcagattttatggaaataag 26516445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 28413334 - 28413274
Alignment:
Q  225 tatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    |||| ||||||||||||||||||||||| ||||| |||| |||||||  |||||| |||||    
T  28413334 tatcttggagagtttatggaaataagctgaaaacagcttatgaacattccataagctgttt 28413274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 29201528 - 29201583
Alignment:
Q  200 taagctataatctgtttttattagctatcctggagagtttatggaaataagctaaa 255  Q
    |||||||||| ||||||| || | ||||||||||||| |||||||||| |||||||    
T  29201528 taagctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 29201583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 30217051 - 30217126
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataa 249  Q
    |||||||||||  || || ||||| |||| |||||| ||| ||| || ||||||||||||||| ||||||||||||    
T  30217051 taaaataaagtctaattaatttcacgtaatctataagctgctttcataagctatcctggagagcttatggaaataa 30217126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 315
Target Start/End: Complemental strand, 35095850 - 35095750
Alignment:
Q  211 ctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagt 310  Q
    ||||||| || ||||||| || | || ||||||||||||| | |||||||| | || |||||||||||||    | ||||||||||||||  ||||||||    
T  35095850 ctgttttcatgagctatcttgtaaagcttatggaaataagttgaaaacggcatatgtacatgtcataaga----tatttccataagctcttccaaacagt 35095755  T
Q  311 ctcat 315  Q
    |||||    
T  35095754 ctcat 35095750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 38047965 - 38047886
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatgga 244  Q
    |||||||  ||||||||||| ||| ||||||||| ||  |||||  ||||||| || ||||||||||||||| |||||||    
T  38047965 aacaaaagataaaataaagtcaaattattttcatatatactatatgctgttttcataagctatcctggagagcttatgga 38047886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 499775 - 499721
Alignment:
Q  231 ggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    |||||||||||||||||||||| |||||  ||| | ||||||||||||| |||||    
T  499775 ggagagtttatggaaataagctgaaaacaacttgttaacatgtcataagctgttt 499721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 285
Target Start/End: Complemental strand, 9202887 - 9202737
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    |||||||||||| |||||| || |||   | |||||  ||||||||||| ||| | ||||||| ||||| |||| ||||||| || || |||| || |||    
T  9202887 ataagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaaga 9202788  T
Q  236 gtttatggaaataagctaaaaacggcttttgaac-atgtcataagatgttt 285  Q
      ||||| |||||||||  |||| |||| ||||| |||||||||| |||||    
T  9202787 acttatgaaaataagctggaaacagcttatgaacaatgtcataagctgttt 9202737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 200 - 258
Target Start/End: Original strand, 18853006 - 18853064
Alignment:
Q  200 taagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    ||||||||||  |||||| ||| ||||||| ||| || |||||||||||||||||||||    
T  18853006 taagctataagatgttttaattggctatccaggatagcttatggaaataagctaaaaac 18853064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 35550909 - 35551006
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggctt 263  Q
    |||||||  ||||||||||| ||  ||||||||| ||| |||||| |||||||||| | ||||||||||||  | ||||| |||||| |||| ||||||    
T  35550909 aacaaaagataaaataaagtcaat-tattttcatataaactataagctgtttttataacctatcctggagaactaatggagataagccaaaatcggctt 35551006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 277
Target Start/End: Original strand, 36638753 - 36638819
Alignment:
Q  211 ctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcata 277  Q
    ||||||| || || |||||| ||||| ||||||||||||||| ||||  |||| |||||||||||||    
T  36638753 ctgttttcataagttatcctagagagcttatggaaataagctgaaaaaagcttatgaacatgtcata 36638819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 214
Target Start/End: Original strand, 39941804 - 39941850
Alignment:
Q  168 aaaatttaaaataaagtgaaactattttcatgtaagctataatctgt 214  Q
    ||||||||||||||||| ||||||||||||  |||||||||| ||||    
T  39941804 aaaatttaaaataaagtcaaactattttcaattaagctataagctgt 39941850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 285
Target Start/End: Complemental strand, 40205211 - 40205064
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||||||| |||||||||||||||| | |||||||  ||||||  ||| | |   ||||||| ||| |||  |  |||||| || ||||||||||||||    
T  40205211 ataagtgctcatgtataagatacttctataacaaaaggtaaaattgagtcagatagttttcatataaacta--agttgttttcataagctatcctggaga 40205114  T
Q  236 gtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    | |||| |||||||||| ||||| | || || |||||| ||||| |||||    
T  40205113 gcttatagaaataagctgaaaacagattatggacatgttataagctgttt 40205064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 2568653 - 2568738
Alignment:
Q  200 taagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||||||||  |||||| || ||||||| ||||||| | ||| ||||||||||||||   ||| |||| |||||||||| |||||    
T  2568653 taagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcataagctgttt 2568738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 285
Target Start/End: Complemental strand, 2880610 - 2880537
Alignment:
Q  212 tgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||||||| |||||| | | |||||||||||||||||||| |||||  ||| ||||||| |||| || |||||    
T  2880610 tgtttttataagctattcagaagagtttatggaaataagctgaaaacaccttatgaacatatcattagctgttt 2880537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 310
Target Start/End: Original strand, 4619706 - 4619808
Alignment:
Q  204 ctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctc 303  Q
    |||||| |||| || || ||||||| ||||||  ||||||||||||| | ||| | |||| |||||||||||| ||    |||||| ||||||||||| |    
T  4619706 ctataaactgtcttcataagctatcatggagaacttatggaaataaggtgaaaccagcttatgaacatgtcattag----ttgttttcataagctctccc 4619801  T
Q  304 aaacagt 310  Q
    |||||||    
T  4619802 aaacagt 4619808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 38766953 - 38766900
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgttttt 218  Q
    |||||||  ||||||||||| ||||||||||||| |||| |||||||| |||||    
T  38766953 aacaaaagctaaaataaagttaaactattttcatctaagttataatctattttt 38766900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 39941694 - 39941735
Alignment:
Q  168 aaaatttaaaataaagtgaaactattttcatgtaagctataa 209  Q
    ||||||||||||||||| ||||||||||||  ||||||||||    
T  39941694 aaaatttaaaataaagtcaaactattttcaattaagctataa 39941735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 1899178 - 1899234
Alignment:
Q  229 ctggagagtttatggaaataagctaaaaacggcttttgaacatgtcataagatgttt 285  Q
    ||||||| |||||||||||||||| |||||  ||| || |||||||||||| |||||    
T  1899178 ctggagaatttatggaaataagctgaaaacaacttatgcacatgtcataagctgttt 1899234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 7096264 - 7096204
Alignment:
Q  138 aagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcat 198  Q
    ||||||||||||||||| || ||| | |||||||  ||||||||||| |||| ||||||||    
T  7096264 aagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaaccattttcat 7096204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 10272532 - 10272448
Alignment:
Q  174 taaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    |||||| |||| ||| | ||||| | ||||||||||  |||||| || ||| ||| ||||||||||||| ||||||||| |||||    
T  10272532 taaaattaagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaac 10272448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 10391331 - 10391375
Alignment:
Q  195 tcatgtaagctataatctgtttttattagctatcctggagagttt 239  Q
    |||| ||||||||||| ||||||||| ||||||||| ||||||||    
T  10391331 tcatataagctataatttgtttttataagctatcctagagagttt 10391375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 263
Target Start/End: Complemental strand, 16945120 - 16944995
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||||||||||||||||| || ||| | || ||||  ||||||  ||| ||| | |||||||  ||||||||| || |||| |||| |||||||| |||    
T  16945120 ataagtgcttatgtataagctatttctacaagaaaagataaaat--agttaaattgttttcatagaagctataagctattttcattaactatcctgaaga 16945023  T
Q  236 gtttatggaaataagctaaaaacggctt 263  Q
    | ||| | ||||||||| ||||| ||||    
T  16945022 gcttaagtaaataagctgaaaacagctt 16944995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 35553271 - 35553211
Alignment:
Q  192 ttttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagct 252  Q
    ||||||| |||||||||| || |||| ||  ||||| |||||||| |||||||||||||||    
T  35553271 ttttcatataagctataaactattttcatacgctattctggagagcttatggaaataagct 35553211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 39750103 - 39750155
Alignment:
Q  165 aacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttt 217  Q
    |||||||  ||||||||||| ||||||||||||| |||| ||||| |||||||    
T  39750103 aacaaaagataaaataaagtcaaactattttcatataagttataacctgtttt 39750155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 136 - 273
Target Start/End: Original strand, 2762 - 2899
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggaga 235  Q
    ||||||||||||||||||| || ||| | |||||||  ||||||||||| |||||||| |||| ||||| ||||      ||||| ||||||||||||||    
T  2762 ataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataagccataaaaatgctttataagctatcctggaga 2861  T
Q  236 gtttatggaaataagctaaaaacggcttttgaacatgt 273  Q
    | | |||  | ||||||||||||  ||| |||||||||    
T  2862 ggtcatgagagtaagctaaaaacaacttatgaacatgt 2899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 209
Target Start/End: Complemental strand, 1213 - 1140
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataa 209  Q
    ||||||||||||||||||| || ||| | |||||||  ||||||||||| |||||||| |||| ||||| ||||    
T  1213 ataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataagccataa 1140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 310
Target Start/End: Complemental strand, 9668 - 9606
Alignment:
Q  244 aaataagctaaaaacggcttttgaacatgtcataagatgtttgtttccataagctctctcaaacagt 310  Q
    ||||||||||||||| |||| ||||||||| |||||    |||||| |||||| |||||||||||||    
T  9668 aaataagctaaaaacagcttatgaacatgtaataag----ttgttttcataagttctctcaaacagt 9606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0584 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0584
Description:

Target: scaffold0584; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 1430 - 1350
Alignment:
Q  177 aataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    |||||| | |||||| |||||| |||||||||| || |||| | ||||||||||||| || ||||| ||||||| |||||||    
T  1430 aataaacttaaactactttcatataagctataagctattttaactagctatcctgga-agcttatgaaaataagataaaaac 1350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 209
Target Start/End: Complemental strand, 1863 - 1790
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataa 209  Q
    |||||||||||| ||||||||| ||| | |||||||  ||||||||||| ||  ||||||||| || |||||||    
T  1863 ataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctataa 1790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 209
Target Start/End: Complemental strand, 3953 - 3880
Alignment:
Q  136 ataagtgcttatgtataagatacttccaaaacaaaatttaaaataaagtgaaactattttcatgtaagctataa 209  Q
    |||||||||||| ||||||||| ||| | |||||||  ||||||||||| ||  ||||||||| || |||||||    
T  3953 ataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctataa 3880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0446 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0446
Description:

Target: scaffold0446; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 5556 - 5476
Alignment:
Q  177 aataaagtgaaactattttcatgtaagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaaac 258  Q
    |||||| | |||||| |||||| |||||||||| || |||| | ||||||||||||| || ||||| ||||||| |||||||    
T  5556 aataaacttaaactactttcatataagctataagctattttaactagctatcctgga-agcttatgaaaataagataaaaac 5476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 6947 - 7003
Alignment:
Q  200 taagctataatctgtttttattagctatcctggagagtttatggaaataagctaaaa 256  Q
    |||||||||| |||||||| | ||||||| || |||| ||||| |||||||||||||    
T  6947 taagctataagctgtttttgtaagctatcatgaagagcttatgaaaataagctaaaa 7003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University