View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14297_low_25 (Length: 344)

Name: NF14297_low_25
Description: NF14297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14297_low_25
NF14297_low_25
[»] chr3 (90 HSPs)
chr3 (216-334)||(39265245-39265363)
chr3 (1-100)||(32981008-32981107)
chr3 (1-99)||(1901814-1901912)
chr3 (1-99)||(1911260-1911358)
chr3 (1-102)||(25959427-25959528)
chr3 (1-99)||(32795921-32796019)
chr3 (3-99)||(31326795-31326891)
chr3 (1-100)||(1295417-1295516)
chr3 (5-101)||(44593055-44593151)
chr3 (1-100)||(7867596-7867695)
chr3 (2-95)||(41717349-41717442)
chr3 (1-97)||(462291-462387)
chr3 (1-97)||(981555-981651)
chr3 (1-100)||(46473213-46473312)
chr3 (7-100)||(50294011-50294104)
chr3 (4-94)||(29800442-29800532)
chr3 (1-104)||(11173535-11173638)
chr3 (1-99)||(36869724-36869823)
chr3 (5-99)||(34607807-34607901)
chr3 (1-89)||(2935408-2935497)
chr3 (5-101)||(9027702-9027799)
chr3 (4-100)||(27198040-27198137)
chr3 (99-144)||(39265434-39265479)
chr3 (3-102)||(2280264-2280364)
chr3 (4-94)||(33971971-33972062)
chr3 (5-99)||(40785586-40785681)
chr3 (4-94)||(43149235-43149326)
chr3 (5-98)||(47276374-47276468)
chr3 (1-102)||(50279971-50280073)
chr3 (5-94)||(53715405-53715494)
chr3 (13-98)||(1031316-1031401)
chr3 (1-89)||(49361734-49361823)
chr3 (5-101)||(49457654-49457751)
chr3 (1-80)||(7123-7200)
chr3 (1-89)||(37215129-37215217)
chr3 (5-92)||(44127086-44127174)
chr3 (1-100)||(48117421-48117521)
chr3 (9-92)||(7231901-7231984)
chr3 (1-99)||(13159746-13159845)
chr3 (1-99)||(42102322-42102421)
chr3 (9-99)||(50025572-50025663)
chr3 (1-102)||(11327193-11327295)
chr3 (1-59)||(30633742-30633800)
chr3 (48-102)||(51973388-51973442)
chr3 (50-95)||(16267799-16267844)
chr3 (59-100)||(47773865-47773906)
chr3 (1-101)||(21481849-21481949)
chr3 (1-69)||(32656060-32656128)
chr3 (5-100)||(35987330-35987426)
chr3 (1-92)||(41111967-41112058)
chr3 (6-98)||(43409254-43409346)
chr3 (4-94)||(45528836-45528927)
chr3 (5-64)||(275315-275374)
chr3 (5-92)||(20380784-20380871)
chr3 (5-92)||(28300541-28300628)
chr3 (5-92)||(29705992-29706079)
chr3 (5-95)||(35376442-35376533)
chr3 (5-99)||(47683879-47683974)
chr3 (4-59)||(54233429-54233484)
chr3 (3-92)||(14847412-14847502)
chr3 (1-98)||(20216033-20216131)
chr3 (1-59)||(20714328-20714386)
chr3 (1-59)||(30400084-30400142)
chr3 (5-59)||(36819045-36819099)
chr3 (1-98)||(37035701-37035799)
chr3 (5-90)||(51385336-51385422)
chr3 (1-98)||(52453980-52454078)
chr3 (5-106)||(55344176-55344278)
chr3 (1-82)||(622364-622445)
chr3 (1-34)||(8066440-8066473)
chr3 (48-101)||(16479629-16479682)
chr3 (1-34)||(26279969-26280002)
chr3 (1-34)||(28269891-28269924)
chr3 (1-34)||(33007445-33007478)
chr3 (4-100)||(38296548-38296645)
chr3 (1-34)||(39604199-39604232)
chr3 (1-34)||(41877564-41877597)
chr3 (1-89)||(48205130-48205219)
chr3 (1-34)||(50745634-50745667)
chr3 (1-34)||(51410891-51410924)
chr3 (1-34)||(51672948-51672981)
chr3 (48-100)||(5114076-5114128)
chr3 (1-101)||(22153949-22154049)
chr3 (1-33)||(25142713-25142745)
chr3 (1-33)||(28263630-28263662)
chr3 (1-100)||(29846777-29846877)
chr3 (1-33)||(35272112-35272144)
chr3 (1-33)||(41877773-41877805)
chr3 (1-92)||(49130939-49131030)
chr3 (1-33)||(51921498-51921530)
[»] chr5 (71 HSPs)
chr5 (1-99)||(15639470-15639568)
chr5 (1-105)||(24792538-24792641)
chr5 (1-98)||(9636047-9636144)
chr5 (1-98)||(7144660-7144757)
chr5 (1-101)||(91300-91400)
chr5 (1-99)||(36581355-36581453)
chr5 (1-98)||(582758-582855)
chr5 (1-94)||(12612909-12613003)
chr5 (5-102)||(26626704-26626801)
chr5 (5-101)||(32732002-32732101)
chr5 (1-94)||(39595359-39595452)
chr5 (2-98)||(26627416-26627512)
chr5 (5-99)||(5698216-5698310)
chr5 (5-100)||(28904081-28904180)
chr5 (5-100)||(28940476-28940575)
chr5 (1-99)||(38387796-38387893)
chr5 (1-89)||(4173021-4173110)
chr5 (5-98)||(13734249-13734342)
chr5 (1-101)||(20040871-20040959)
chr5 (1-98)||(11880875-11880973)
chr5 (1-102)||(17574108-17574210)
chr5 (4-98)||(19437345-19437439)
chr5 (1-94)||(43152952-43153046)
chr5 (5-92)||(3518272-3518360)
chr5 (4-100)||(6865674-6865770)
chr5 (1-92)||(34381097-34381188)
chr5 (1-94)||(23991316-23991410)
chr5 (3-75)||(10469859-10469931)
chr5 (1-100)||(17063950-17064050)
chr5 (1-92)||(125177-125268)
chr5 (4-98)||(3960057-3960152)
chr5 (8-98)||(7080606-7080694)
chr5 (1-107)||(30574256-30574363)
chr5 (6-88)||(41210412-41210495)
chr5 (5-99)||(41460205-41460300)
chr5 (1-102)||(12512878-12512980)
chr5 (1-59)||(15622129-15622187)
chr5 (4-94)||(36624406-36624496)
chr5 (1-89)||(9957098-9957187)
chr5 (8-101)||(33567125-33567218)
chr5 (5-92)||(35358829-35358917)
chr5 (5-92)||(40566111-40566199)
chr5 (5-92)||(28811517-28811604)
chr5 (4-98)||(31284283-31284377)
chr5 (4-59)||(33823622-33823677)
chr5 (8-102)||(2117525-2117619)
chr5 (1-59)||(4954551-4954609)
chr5 (1-75)||(5005198-5005272)
chr5 (1-59)||(9596742-9596800)
chr5 (1-59)||(10522860-10522918)
chr5 (5-59)||(22920420-22920474)
chr5 (1-59)||(28501702-28501760)
chr5 (5-98)||(29803312-29803406)
chr5 (1-94)||(2863634-2863727)
chr5 (5-94)||(3722969-3723058)
chr5 (1-34)||(9714089-9714122)
chr5 (1-34)||(12718333-12718366)
chr5 (1-34)||(12779559-12779592)
chr5 (1-34)||(19376085-19376118)
chr5 (4-92)||(20719910-20719998)
chr5 (5-34)||(30334719-30334748)
chr5 (11-91)||(38919941-38920022)
chr5 (1-34)||(42909804-42909837)
chr5 (1-92)||(5130272-5130364)
chr5 (4-92)||(8787051-8787139)
chr5 (1-33)||(14323922-14323954)
chr5 (1-33)||(19271944-19271976)
chr5 (5-89)||(27392600-27392684)
chr5 (1-33)||(38010957-38010989)
chr5 (5-89)||(40201018-40201102)
chr5 (1-33)||(41192672-41192704)
[»] chr8 (59 HSPs)
chr8 (1-102)||(12045538-12045639)
chr8 (5-102)||(42443195-42443292)
chr8 (1-98)||(1796568-1796665)
chr8 (1-99)||(6005029-6005127)
chr8 (5-98)||(36740401-36740494)
chr8 (8-107)||(38174128-38174228)
chr8 (2-97)||(9046239-9046334)
chr8 (13-95)||(5782885-5782967)
chr8 (5-98)||(32725671-32725764)
chr8 (5-99)||(8233383-8233478)
chr8 (1-99)||(9000901-9001000)
chr8 (1-92)||(37524323-37524414)
chr8 (4-99)||(44380502-44380597)
chr8 (4-105)||(5742538-5742640)
chr8 (1-94)||(20994950-20995044)
chr8 (5-98)||(30578343-30578437)
chr8 (1-98)||(36524640-36524738)
chr8 (1-100)||(14548711-14548811)
chr8 (1-94)||(20853004-20853097)
chr8 (1-101)||(23258117-23258217)
chr8 (1-92)||(28927766-28927857)
chr8 (4-98)||(30927819-30927914)
chr8 (1-99)||(34838157-34838256)
chr8 (54-100)||(69513-69559)
chr8 (1-59)||(2597088-2597146)
chr8 (1-71)||(28156288-28156358)
chr8 (5-98)||(38844679-38844773)
chr8 (6-92)||(40413258-40413344)
chr8 (1-102)||(41273600-41273702)
chr8 (5-102)||(41776264-41776362)
chr8 (9-94)||(42651013-42651099)
chr8 (8-101)||(45405720-45405814)
chr8 (1-94)||(7678817-7678910)
chr8 (1-94)||(22767215-22767308)
chr8 (8-100)||(43605555-43605648)
chr8 (1-100)||(6849147-6849247)
chr8 (1-100)||(22203101-22203201)
chr8 (1-92)||(25430731-25430823)
chr8 (1-92)||(30925549-30925640)
chr8 (4-99)||(44001144-44001240)
chr8 (4-94)||(1422594-1422685)
chr8 (1-99)||(18550064-18550163)
chr8 (36-94)||(20284827-20284886)
chr8 (36-94)||(21071456-21071515)
chr8 (1-102)||(5502445-5502548)
chr8 (1-59)||(19723134-19723192)
chr8 (1-102)||(22836023-22836125)
chr8 (1-39)||(34641638-34641676)
chr8 (1-59)||(37562069-37562127)
chr8 (1-59)||(39359821-39359879)
chr8 (1-34)||(426186-426219)
chr8 (1-34)||(23709061-23709094)
chr8 (1-34)||(24946087-24946120)
chr8 (1-101)||(32674117-32674218)
chr8 (1-34)||(37033054-37033087)
chr8 (4-92)||(5359426-5359514)
chr8 (70-98)||(9314566-9314594)
chr8 (1-69)||(31665908-31665976)
chr8 (1-33)||(35967360-35967392)
[»] scaffold0166 (1 HSPs)
scaffold0166 (1-105)||(34921-35024)
[»] chr1 (73 HSPs)
chr1 (5-100)||(30687141-30687236)
chr1 (1-98)||(4604614-4604711)
chr1 (1-106)||(48872464-48872569)
chr1 (1-103)||(27352715-27352817)
chr1 (1-99)||(44730729-44730827)
chr1 (1-97)||(51339590-51339686)
chr1 (11-102)||(36930641-36930732)
chr1 (1-100)||(50527944-50528043)
chr1 (1-99)||(25061818-25061916)
chr1 (1-98)||(43611971-43612068)
chr1 (1-99)||(40595942-40596040)
chr1 (4-99)||(21255672-21255768)
chr1 (1-95)||(25098683-25098774)
chr1 (5-101)||(49621450-49621546)
chr1 (5-90)||(30530471-30530556)
chr1 (5-101)||(31244620-31244717)
chr1 (1-100)||(11460879-11460978)
chr1 (5-100)||(16658528-16658627)
chr1 (1-94)||(37947112-37947206)
chr1 (1-98)||(47059778-47059876)
chr1 (2-98)||(43640875-43640972)
chr1 (5-100)||(8577388-8577484)
chr1 (3-102)||(46903557-46903657)
chr1 (1-100)||(48325307-48325407)
chr1 (4-98)||(16987535-16987630)
chr1 (25-99)||(40605308-40605383)
chr1 (5-101)||(38019389-38019484)
chr1 (1-99)||(23554836-23554935)
chr1 (8-95)||(32821727-32821814)
chr1 (5-100)||(51172194-51172289)
chr1 (11-100)||(25239123-25239213)
chr1 (4-70)||(41885809-41885875)
chr1 (1-102)||(22389411-22389511)
chr1 (4-104)||(32966355-32966456)
chr1 (1-100)||(13813643-13813743)
chr1 (1-89)||(39010899-39010987)
chr1 (1-92)||(40610314-40610405)
chr1 (59-95)||(51571661-51571697)
chr1 (8-94)||(48336347-48336434)
chr1 (4-100)||(11897262-11897359)
chr1 (54-94)||(5043186-5043226)
chr1 (5-92)||(28457241-28457329)
chr1 (48-100)||(33100806-33100858)
chr1 (5-99)||(29253953-29254048)
chr1 (1-92)||(30530294-30530385)
chr1 (1-92)||(30631740-30631831)
chr1 (1-92)||(31290103-31290194)
chr1 (4-59)||(42843272-42843327)
chr1 (1-75)||(2827622-2827696)
chr1 (1-59)||(7203772-7203830)
chr1 (1-98)||(11121566-11121663)
chr1 (1-59)||(25995545-25995603)
chr1 (5-59)||(26501384-26501438)
chr1 (1-59)||(29362620-29362678)
chr1 (1-59)||(36669298-36669356)
chr1 (6-99)||(42299075-42299169)
chr1 (5-94)||(51168660-51168750)
chr1 (5-94)||(52669672-52669762)
chr1 (48-101)||(8350217-8350270)
chr1 (1-34)||(28253100-28253133)
chr1 (1-34)||(31436905-31436938)
chr1 (1-82)||(33422124-33422205)
chr1 (1-34)||(35846272-35846305)
chr1 (1-82)||(44112539-44112620)
chr1 (1-34)||(45740497-45740530)
chr1 (1-34)||(50659145-50659178)
chr1 (1-33)||(2257648-2257680)
chr1 (53-101)||(2571632-2571680)
chr1 (5-101)||(4511663-4511759)
chr1 (1-33)||(10385499-10385531)
chr1 (1-33)||(11097838-11097870)
chr1 (1-33)||(43196043-43196075)
chr1 (1-92)||(48962071-48962163)
[»] chr4 (84 HSPs)
chr4 (4-101)||(46567017-46567114)
chr4 (11-98)||(28676043-28676130)
chr4 (1-101)||(18874809-18874910)
chr4 (7-102)||(12638915-12639010)
chr4 (5-98)||(40847458-40847549)
chr4 (1-98)||(43982982-43983080)
chr4 (5-98)||(33438134-33438227)
chr4 (1-99)||(37977200-37977298)
chr4 (5-100)||(55510948-55511043)
chr4 (8-98)||(7795090-7795182)
chr4 (5-100)||(46799845-46799940)
chr4 (1-92)||(4896395-4896486)
chr4 (4-91)||(31658007-31658094)
chr4 (4-99)||(51389404-51389499)
chr4 (1-99)||(54801081-54801180)
chr4 (1-59)||(3223074-3223132)
chr4 (50-100)||(11997784-11997834)
chr4 (1-59)||(34027981-34028039)
chr4 (5-102)||(42510809-42510907)
chr4 (1-94)||(45678348-45678442)
chr4 (1-101)||(4878052-4878153)
chr4 (1-101)||(5208212-5208313)
chr4 (1-58)||(7037413-7037470)
chr4 (5-94)||(16508870-16508959)
chr4 (9-102)||(22071591-22071684)
chr4 (5-98)||(23094465-23094557)
chr4 (61-98)||(41010060-41010097)
chr4 (1-102)||(47998679-47998779)
chr4 (3-75)||(1987625-1987697)
chr4 (4-92)||(31275234-31275322)
chr4 (1-100)||(42854026-42854126)
chr4 (1-100)||(44368088-44368188)
chr4 (1-100)||(51377179-51377279)
chr4 (5-92)||(5234366-5234453)
chr4 (1-100)||(26440748-26440847)
chr4 (63-98)||(32621764-32621799)
chr4 (62-97)||(48783940-48783975)
chr4 (1-101)||(23220420-23220522)
chr4 (1-94)||(24088432-24088526)
chr4 (1-59)||(27001337-27001395)
chr4 (5-98)||(23836989-23837082)
chr4 (5-97)||(33860435-33860528)
chr4 (1-102)||(42915104-42915205)
chr4 (5-92)||(1580177-1580265)
chr4 (1-100)||(3475953-3476053)
chr4 (5-100)||(6126942-6127038)
chr4 (5-92)||(26442282-26442370)
chr4 (9-99)||(34259918-34260010)
chr4 (1-57)||(48650186-48650242)
chr4 (1-92)||(3286903-3286994)
chr4 (1-99)||(8026651-8026750)
chr4 (4-75)||(9827897-9827968)
chr4 (1-92)||(15596481-15596572)
chr4 (62-97)||(24209689-24209724)
chr4 (4-59)||(47105999-47106054)
chr4 (1-59)||(8455988-8456046)
chr4 (1-59)||(15515869-15515927)
chr4 (8-101)||(29863643-29863737)
chr4 (1-59)||(31221498-31221556)
chr4 (1-94)||(33776979-33777073)
chr4 (1-59)||(41495098-41495156)
chr4 (11-104)||(44495878-44495972)
chr4 (1-34)||(9162151-9162184)
chr4 (73-102)||(14443357-14443386)
chr4 (5-58)||(29577365-29577418)
chr4 (1-74)||(31318833-31318906)
chr4 (1-34)||(38952774-38952807)
chr4 (48-109)||(43174973-43175034)
chr4 (4-92)||(46309017-46309106)
chr4 (1-34)||(46794454-46794487)
chr4 (1-89)||(50291367-50291456)
chr4 (48-101)||(55609186-55609239)
chr4 (1-33)||(4550419-4550451)
chr4 (48-107)||(17475313-17475373)
chr4 (1-92)||(22257091-22257182)
chr4 (48-100)||(23369353-23369405)
chr4 (1-33)||(24235405-24235437)
chr4 (1-99)||(36364672-36364771)
chr4 (1-33)||(39844212-39844244)
chr4 (72-100)||(44272698-44272726)
chr4 (1-33)||(44539379-44539411)
chr4 (1-92)||(46791885-46791977)
chr4 (4-99)||(48148456-48148552)
chr4 (1-33)||(56025341-56025373)
[»] chr2 (73 HSPs)
chr2 (4-100)||(21805673-21805769)
chr2 (1-101)||(5167628-5167728)
chr2 (1-102)||(19668072-19668173)
chr2 (4-101)||(40951278-40951375)
chr2 (1-95)||(30856892-30856986)
chr2 (4-98)||(37631255-37631350)
chr2 (5-98)||(4842408-4842501)
chr2 (5-99)||(36763407-36763502)
chr2 (54-104)||(19637365-19637415)
chr2 (54-104)||(19835958-19836008)
chr2 (1-100)||(8352920-8353020)
chr2 (5-89)||(13553232-13553316)
chr2 (6-98)||(305857-305950)
chr2 (4-99)||(8757632-8757728)
chr2 (1-101)||(13711146-13711246)
chr2 (1-99)||(15283137-15283236)
chr2 (3-99)||(1574540-1574637)
chr2 (1-97)||(3959981-3960078)
chr2 (1-92)||(30340078-30340171)
chr2 (4-89)||(35792354-35792439)
chr2 (1-101)||(3091826-3091926)
chr2 (1-97)||(11126549-11126644)
chr2 (1-100)||(34913173-34913273)
chr2 (1-101)||(36133059-36133159)
chr2 (5-92)||(11164271-11164358)
chr2 (1-92)||(12600133-12600224)
chr2 (4-101)||(8555177-8555275)
chr2 (5-91)||(10288241-10288327)
chr2 (1-59)||(23048011-23048069)
chr2 (1-59)||(36383547-36383605)
chr2 (1-93)||(8482127-8482220)
chr2 (5-105)||(9384464-9384565)
chr2 (57-94)||(13553310-13553347)
chr2 (1-101)||(28165214-28165315)
chr2 (5-92)||(304886-304974)
chr2 (5-100)||(11828706-11828802)
chr2 (1-89)||(13104564-13104652)
chr2 (1-92)||(19913869-19913961)
chr2 (6-98)||(32128220-32128311)
chr2 (1-89)||(32750083-32750171)
chr2 (1-100)||(35705803-35705903)
chr2 (4-92)||(36909738-36909826)
chr2 (5-92)||(38724211-38724299)
chr2 (1-101)||(43725290-43725390)
chr2 (1-100)||(45202018-45202118)
chr2 (5-92)||(45515494-45515581)
chr2 (1-99)||(10550346-10550445)
chr2 (1-92)||(11229216-11229307)
chr2 (1-92)||(29795521-29795612)
chr2 (6-100)||(36582346-36582441)
chr2 (1-95)||(37966441-37966536)
chr2 (47-101)||(2464268-2464322)
chr2 (1-90)||(4263760-4263850)
chr2 (1-105)||(23141438-23141544)
chr2 (1-105)||(23553228-23553334)
chr2 (5-94)||(37076742-37076832)
chr2 (5-75)||(43026025-43026095)
chr2 (9-102)||(43791675-43791769)
chr2 (1-59)||(44484584-44484642)
chr2 (1-82)||(546290-546371)
chr2 (1-34)||(5067594-5067627)
chr2 (1-98)||(6365271-6365368)
chr2 (1-34)||(12208527-12208560)
chr2 (1-34)||(32688497-32688530)
chr2 (4-95)||(1052381-1052473)
chr2 (1-57)||(3196017-3196073)
chr2 (1-89)||(3366114-3366205)
chr2 (1-33)||(12192032-12192064)
chr2 (1-33)||(19523355-19523387)
chr2 (1-33)||(30413686-30413718)
chr2 (1-33)||(30973945-30973977)
chr2 (1-33)||(31847616-31847648)
chr2 (1-33)||(38021441-38021473)
[»] chr7 (55 HSPs)
chr7 (1-107)||(18157064-18157171)
chr7 (1-102)||(2469777-2469878)
chr7 (1-102)||(25940552-25940653)
chr7 (7-104)||(35098470-35098567)
chr7 (2-99)||(6655505-6655602)
chr7 (5-96)||(43107701-43107792)
chr7 (1-104)||(40693410-40693514)
chr7 (1-99)||(9031292-9031390)
chr7 (4-98)||(27688725-27688819)
chr7 (1-101)||(43079515-43079618)
chr7 (9-86)||(43444721-43444798)
chr7 (28-100)||(35072132-35072204)
chr7 (9-98)||(30941270-30941359)
chr7 (1-100)||(37392128-37392228)
chr7 (5-100)||(8061633-8061727)
chr7 (3-92)||(2600428-2600518)
chr7 (2-99)||(4678149-4678247)
chr7 (1-98)||(46148251-46148349)
chr7 (1-92)||(12141969-12142060)
chr7 (11-97)||(21588816-21588903)
chr7 (5-95)||(40077344-40077435)
chr7 (1-102)||(10591032-10591134)
chr7 (1-102)||(25272676-25272778)
chr7 (1-102)||(48866815-48866916)
chr7 (1-92)||(5978664-5978755)
chr7 (6-97)||(28110045-28110137)
chr7 (5-92)||(37970022-37970110)
chr7 (1-102)||(8792485-8792583)
chr7 (1-59)||(42431808-42431866)
chr7 (10-71)||(29034179-29034240)
chr7 (1-102)||(38978577-38978678)
chr7 (5-92)||(44185265-44185353)
chr7 (1-98)||(26041395-26041493)
chr7 (1-59)||(30864345-30864403)
chr7 (54-100)||(32428206-32428252)
chr7 (1-98)||(33050268-33050366)
chr7 (54-100)||(39137151-39137197)
chr7 (1-34)||(5378712-5378745)
chr7 (1-86)||(12102610-12102695)
chr7 (1-34)||(31982142-31982175)
chr7 (1-98)||(33464926-33465023)
chr7 (1-34)||(38197746-38197779)
chr7 (1-59)||(42118625-42118685)
chr7 (1-34)||(45607109-45607142)
chr7 (1-34)||(47193012-47193045)
chr7 (1-70)||(49142434-49142503)
chr7 (72-100)||(4971444-4971472)
chr7 (41-96)||(10619589-10619645)
chr7 (3-75)||(11070315-11070387)
chr7 (5-92)||(23034207-23034295)
chr7 (59-95)||(29034257-29034293)
chr7 (1-92)||(34348922-34349013)
chr7 (1-92)||(41910079-41910171)
chr7 (48-100)||(44895593-44895645)
chr7 (1-92)||(48639279-48639371)
[»] chr6 (31 HSPs)
chr6 (1-106)||(32729974-32730079)
chr6 (1-101)||(21443773-21443873)
chr6 (5-102)||(608545-608643)
chr6 (4-98)||(8173201-8173295)
chr6 (1-98)||(12044415-12044513)
chr6 (1-102)||(16533144-16533246)
chr6 (1-101)||(23653778-23653879)
chr6 (1-98)||(11742872-11742970)
chr6 (54-98)||(25567382-25567426)
chr6 (1-103)||(32644697-32644800)
chr6 (1-101)||(16743151-16743252)
chr6 (5-99)||(20712155-20712250)
chr6 (1-98)||(9188834-9188932)
chr6 (4-101)||(1897774-1897871)
chr6 (5-100)||(22422239-22422335)
chr6 (54-98)||(25561831-25561875)
chr6 (54-98)||(26101345-26101389)
chr6 (5-92)||(2582751-2582838)
chr6 (9-52)||(3089050-3089093)
chr6 (1-102)||(9954633-9954735)
chr6 (1-75)||(2165212-2165286)
chr6 (1-75)||(2176845-2176919)
chr6 (1-59)||(11017467-11017525)
chr6 (2-80)||(12177652-12177730)
chr6 (1-102)||(34021057-34021158)
chr6 (1-34)||(32457205-32457238)
chr6 (1-101)||(7693400-7693500)
chr6 (1-33)||(15328574-15328606)
chr6 (48-100)||(22079584-22079636)
chr6 (1-33)||(25924818-25924850)
chr6 (5-100)||(28548907-28549003)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-98)||(16483-16580)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-98)||(56264-56361)
[»] scaffold0002 (2 HSPs)
scaffold0002 (5-100)||(440807-440902)
scaffold0002 (1-99)||(147143-147242)
[»] scaffold0115 (1 HSPs)
scaffold0115 (1-92)||(15084-15174)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-99)||(337203-337301)
scaffold0003 (1-33)||(88893-88925)
[»] scaffold0501 (1 HSPs)
scaffold0501 (1-106)||(10397-10502)
[»] scaffold0241 (1 HSPs)
scaffold0241 (1-101)||(5314-5415)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-94)||(204339-204433)
[»] scaffold0018 (2 HSPs)
scaffold0018 (4-92)||(36087-36178)
scaffold0018 (53-101)||(48315-48362)
[»] scaffold0036 (1 HSPs)
scaffold0036 (5-92)||(18093-18179)
[»] scaffold0514 (1 HSPs)
scaffold0514 (1-59)||(1424-1482)
[»] scaffold0318 (1 HSPs)
scaffold0318 (1-98)||(18179-18275)
[»] scaffold0286 (1 HSPs)
scaffold0286 (1-75)||(17123-17197)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-94)||(3028-3122)
[»] scaffold0651 (1 HSPs)
scaffold0651 (1-74)||(4764-4837)
[»] scaffold0508 (1 HSPs)
scaffold0508 (1-34)||(11489-11522)
[»] scaffold0009 (1 HSPs)
scaffold0009 (53-98)||(4959-5004)
[»] scaffold0004 (1 HSPs)
scaffold0004 (42-95)||(240132-240185)


Alignment Details
Target: chr3 (Bit Score: 119; Significance: 9e-61; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 216 - 334
Target Start/End: Complemental strand, 39265363 - 39265245
Alignment:
Q  216 cactttgatgttaataacaatcccataccaaattttaagaattatagaagctggaaatagaaacatttaaaaagaatcaacatgagttaggcaaataaag 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39265363 cactttgatgttaataacaatcccataccaaattttaagaattatagaagctggaaatagaaacatttaaaaagaatcaacatgagttaggcaaataaag 39265264  T
Q  316 cattggttcttaccctttg 334  Q
    |||||||||||||||||||    
T  39265263 cattggttcttaccctttg 39265245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 32981107 - 32981008
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  32981107 ttcctttttctctctccattgtttttgacaaatgagaagggagaagaagaaggttgtcaaaaaatttgtaccaaatggttgttcaaatatcattgctctt 32981008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 1901912 - 1901814
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| | ||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  1901912 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtaccaaatggttgttcaaatattattgctct 1901814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 1911358 - 1911260
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| | ||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  1911358 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtaccaaatggttgttcaaatattattgctct 1911260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 25959528 - 25959427
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| | ||| ||||||||| |||||||| |||||||||||||||||||||||||||||    
T  25959528 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaatgaaagttgtcaaataggttgtatcaaatggttgttcaaatatcattgctctt 25959429  T
Q  101 tt 102  Q
    ||    
T  25959428 tt 25959427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 32795921 - 32796019
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| |||||||||   ||| ||||| | ||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  32795921 ttcctttttctctctccattgtttttgaccaataaaaagagagaaaatgaaagttgtcaaataggttgtaccaaatggttgttcaaatatcattgctct 32796019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 31326795 - 31326891
Alignment:
Q  3 cctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||| ||||||||||  ||| ||||| | |||| |||||||| || ||||||||||||||||||||||||||||||||||    
T  31326795 cctttttctctctccattgtttttgaccaatgaaaagagagaaaatgaagattgtcaaatagattgtaccaaatggttgttcaaatatcattgctct 31326891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 1295417 - 1295516
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    |||||||||||||||| |||||| ||||||||||  |||  |||| ||||||||||||||||  |||||| |||||||||||||||||||||||||||||    
T  1295417 ttcctttttctctctctattgtttttgaccaatgaaaagatagaaaaagaaggttgtcaaaattgttgtagcaaatggttgttcaaatatcattgctctt 1295516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 44593055 - 44593151
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctcttt 101  Q
    ||||||||||||||||||| ||||||||||  ||  ||||| | ||||||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  44593055 tttttctctctccattgtttttgaccaatgaaaatagagaaaatgaaggttgtcaaaaaagttgtaccaaatgattattcaaatatcattgctcttt 44593151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 7867695 - 7867596
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||| |||||| |||||||| || |||||||  ||| ||||| | ||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  7867695 ttcctttctctctcaccattgttttttaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctctt 7867596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 41717349 - 41717442
Alignment:
Q  2 tcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattg 95  Q
    |||||||||||||||||||||| ||||||||||  ||| ||||| |||||| |||||||| || || ||||||||||||| |||||||||||||    
T  41717349 tcctttttctctctccattgtttttgaccaatgaaaagagagaaaaagaagattgtcaaatagattataccaaatggttgatcaaatatcattg 41717442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 462387 - 462291
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgct 97  Q
    ||||||||||||| ||||||||| || | |||||  ||| ||||| |  |||||||||||| |||||||||||||||||||||||||||||||||||    
T  462387 ttcctttttctctatccattgttttttatcaatgaaaagagagaaaagaaaggttgtcaaataggttgtaccaaatggttgttcaaatatcattgct 462291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 981555 - 981651
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgct 97  Q
    |||||||||||||| ||||| || ||||||||||  ||| ||||| | ||||||||||||| ||| ||||| |||||||||||||||||||||||||    
T  981555 ttcctttttctctccccattatttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggctgtactaaatggttgttcaaatatcattgct 981651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 46473213 - 46473312
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| ||  | ||||||| ||| |||||| ||||||||||||||||||||||| |||||    
T  46473213 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcataaaagttgtatcaaatggttgttcaaatatcattactctt 46473312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 50294104 - 50294011
Alignment:
Q  7 tttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||| ||||||||| |||| |||||  ||| ||||| ||||| ||||||||| | ||||||||||||||||||| ||||||||||||||||    
T  50294104 tttctctttccattgtttttgatcaatgaaaagagagaaaaagaaagttgtcaaataagttgtaccaaatggttgttaaaatatcattgctctt 50294011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 29800532 - 29800442
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcatt 94  Q
    ||||||||||||||||| || ||||||||||  ||| ||||| |||||| || ||||| ||||||||||||||  ||||||||||||||||    
T  29800532 ctttttctctctccattatttttgaccaatgaaaagagagaaaaagaagattttcaaataggttgtaccaaataattgttcaaatatcatt 29800442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 11173535 - 11173638
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||  ||||||| ||||||||||  ||| ||||| ||  | ||||||| ||| |||||| ||||||||||||||||||| ||| |||||    
T  11173535 ttcctttttctctcaacattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatattattactctt 11173634  T
Q  101 ttaa 104  Q
    ||||    
T  11173635 ttaa 11173638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 36869823 - 36869724
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||  ||  |||||||||  || |||| || ||||||||||||||||||||||||||||    
T  36869823 ttcctttttctctctccattgtttttgaccaatgaaaagagagagaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctct 36869724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 34607901 - 34607807
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    ||||| ||||||||||||| || | |||||  ||| ||||| | ||||||||||||| || ||||||||||| |||||||||||||| |||||||    
T  34607901 tttttttctctccattgttttttatcaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatagttgttcaaatatcgttgctct 34607807  T

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Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 2935497 - 2935408
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaata 89  Q
    ||||||||||||||||||||||| |||||||||| ||||  |||| || |||||||||| ||| ||||||| ||| | ||||||||||||    
T  2935497 ttcctttttctctctccattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 2935408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 9027702 - 9027799
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcattgctcttt 101  Q
    ||||||||||||||||||| |||||||||  |||| ||||| || ||||||||   ||| |||||||| |||| ||||||||||||||||| ||||||    
T  9027702 tttttctctctccattgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactcttt 9027799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 27198137 - 27198040
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctctt 100  Q
    |||||||||||||||||||| || |||||||  ||| ||||| ||  ||||||||| ||| |||| || |||||| ||||||||||||||||||||||    
T  27198137 ctttttctctctccattgtttttaaccaatgaaaagagagaaaaatgaggttgtcataaaagttgttagcaaatgattgttcaaatatcattgctctt 27198040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 39265479 - 39265434
Alignment:
Q  99 ttttaaaatagtttgttactttacctctagaaatatagttgcatgg 144  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  39265479 ttttaaaatagtttgttactttacctctagaaatatagttggatgg 39265434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 2280264 - 2280364
Alignment:
Q  3 cctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcattgctcttt 101  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| || || ||||||  |||| ||||||| ||||||||||  |||||||| | ||||||    
T  2280264 cctttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaagattgtaccaaaatggttgtcaaaatatcactactcttt 2280363  T
Q  102 t 102  Q
    |    
T  2280364 t 2280364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 33971971 - 33972062
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcatt 94  Q
    |||||||||||||||||||| || ||||||| |||| ||||| || |||||||||  |||  ||||||| |||| |||||||||||||||||    
T  33971971 ctttttctctctccattgtttttaaccaatgagaagagagaacaacaaggttgtctcaaaaattgtaccaaaatagttgttcaaatatcatt 33972062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 40785681 - 40785586
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||| ||||||||||  ||  ||||| ||| |||||||||  || || || | ||||||||||||||||||||||||||||    
T  40785681 tttttctctctccattgtttttgaccaatgaaaatagagaaaaaggaggttgtcatcaaagtcgttagcaaatggttgttcaaatatcattgctct 40785586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 43149326 - 43149235
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcatt 94  Q
    |||||||||||||||||||| |||||||||  |||| ||||| || ||||||||   ||| |||||||| |||| |||||||||||||||||    
T  43149326 ctttttctctctccattgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcatt 43149235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 47276374 - 47276468
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctc 98  Q
    ||||||| ||||||||||| |||||||||| |||| ||||| ||| ||||||||| | | |||| || || ||| ||||||||||||||||||||    
T  47276374 tttttctttctccattgtttttgaccaatgagaagagagaaaaaggaggttgtcatagaagttgttagcacatgattgttcaaatatcattgctc 47276468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 50280073 - 50279971
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| ||||| |||  |||| ||||| || ||||||||||  || ||||| |  |||||| ||| ||||||||||||||||    
T  50280073 ttcctttttctctctccattgtttttgacaaataagaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatatcattgctct 50279974  T
Q  100 ttt 102  Q
    |||    
T  50279973 ttt 50279971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 53715405 - 53715494
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcatt 94  Q
    ||||||||||||||||||| ||||| |||| |||| ||||| ||| ||||||||| ||| |||| || ||||| |||||||||||||||||    
T  53715405 tttttctctctccattgtt-ttgactaatgagaagagagaaaaaggaggttgtcataaaagttgttatcaaatagttgttcaaatatcatt 53715494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 1031401 - 1031316
Alignment:
Q  13 tctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||| |||||||||  ||||  |||| || || ||||||| ||| ||||||||||||  ||||||||||||||||||||    
T  1031401 tctccattgtttttgaccaataagaagaaagaaaaataaagttgtcataaaagttgtaccaaataattgttcaaatatcattgctc 1031316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 49361823 - 49361734
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaata 89  Q
    ||||||||||||||||||||||| |||||||||| ||||  |||| || || ||||||| ||| ||||||| ||| | ||||||||||||    
T  49361823 ttcctttttctctctccattgttattgaccaatgagaagaaagaataacaaagttgtcacaaaagttgtactaaaagagttgttcaaata 49361734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 49457654 - 49457751
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca-aaaaggttgtaccaaatggttgttcaaatatcattgctcttt 101  Q
    ||||||||||||||||||| ||||||||||  ||| ||||| ||  ||||||||| | ||| |  || |||||| |||||||||||||||||||||||    
T  49457654 tttttctctctccattgtttttgaccaatgaaaagagagaaaaatgaggttgtcatagaagttattagcaaatgtttgttcaaatatcattgctcttt 49457751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 7200 - 7123
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggtt 80  Q
    ||||||||||||||||||||||| |||||||||   ||  ||||| |||||||||||||||||  ||||| |||||||||    
T  7200 ttcctttttctctctccattgtttttgaccaataaaaaaagagaaaaagaaggttgtcaaaaa--ttgtagcaaatggtt 7123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 37215217 - 37215129
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaata 89  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| ||  | ||||||| ||| |||||  || |||||||||||||||    
T  37215217 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaata 37215129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 44127174 - 44127086
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||| || ||||||| |||| ||||| ||  ||||||||| ||| |||| || ||||| |||||||||||||||    
T  44127174 tttttctctctccattgtttttaaccaatgagaagagagaaaaatgaggttgtcataaaagttgttagcaaatagttgttcaaatatca 44127086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 48117421 - 48117521
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgta-ccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||| | || |||||||||  ||| |||||| | |||  ||||||||||||||||| ||||    
T  48117421 ttcctttttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 48117520  T
Q  100 t 100  Q
    |    
T  48117521 t 48117521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 7231984 - 7231901
Alignment:
Q  9 tctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||| ||||||||||  ||| ||||| ||  |  |||||| ||| |||||| |||||||||||||||||||||    
T  7231984 tctctctccattgtttttgaccaatgaaaagagagaaaaaataaattgtcacaaaagttgtatcaaatggttgttcaaatatca 7231901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 13159746 - 13159845
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || ||||||||||  || ||||| |   ||||| ||| ||||||||||||||||    
T  13159746 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctct 13159845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 42102322 - 42102421
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| |||||||||   ||   |||| ||  |||||||||  || |||| || ||||||||||||||||||||||||||||    
T  42102322 ttcctttttctctctccattgtttttgaccaataaaaaaaaagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctct 42102421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 50025663 - 50025572
Alignment:
Q  9 tctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcattgctct 99  Q
    |||||||| |||||| |||||||||| |||| ||||| || || ||||||  |||||||||||| ||||||||||  |||||||||| ||||    
T  50025663 tctctctctattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtgaaaatatcattactct 50025572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 11327193 - 11327295
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||| |||||| |||||||||  |||| ||||  || ||||||||||  || ||||| |  |||||| ||| ||||||||||||||||    
T  11327193 ttcctttttctctctctattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctct 11327292  T
Q  100 ttt 102  Q
    |||    
T  11327293 ttt 11327295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 30633800 - 30633742
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||| |||||||||||||||||  |||| ||||| || ||||||||||    
T  30633800 ttcctttttctctcttcattgttcttgaccaataagaagagagaaaaataaggttgtca 30633742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 51973388 - 51973442
Alignment:
Q  48 agaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctttt 102  Q
    |||| ||||||| ||| |||||||||||||| ||||||||||||||| |||||||    
T  51973388 agaaagttgtcacaaaagttgtaccaaatggatgttcaaatatcatttctctttt 51973442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 16267844 - 16267799
Alignment:
Q  50 aaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattg 95  Q
    |||||||||||||| ||||||||||||| |||||||||||| ||||    
T  16267844 aaggttgtcaaaaatgttgtaccaaatgattgttcaaatattattg 16267799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 100
Target Start/End: Complemental strand, 47773906 - 47773865
Alignment:
Q  59 aaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    |||||||||||||||||||||||||||||||| ||| |||||    
T  47773906 aaaaaggttgtaccaaatggttgttcaaatatgattactctt 47773865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 21481849 - 21481949
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||| |||| |||||| |||||||||| |||| ||||| ||  ||||||||  ||| ||||||  ||  |||||||||||||||| | |||||    
T  21481849 ttcctttttctgtctctattgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagttgtataaataggttgttcaaatatcactcctctt 21481948  T
Q  101 t 101  Q
    |    
T  21481949 t 21481949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 32656060 - 32656128
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt 69  Q
    ||||||||||||||||||||||| ||||||||||  |||  |||| | |||||| |||||| |||||||    
T  32656060 ttcctttttctctctccattgtttttgaccaatgaaaagaaagaaaaggaaggtcgtcaaataggttgt 32656128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 35987330 - 35987426
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtac-caaatggttgttcaaatatcattgctctt 100  Q
    ||||| |||||||||| || |||||||||   |||  |||| ||||||||||||| |||  |||||  |||||| ||||||||||||||||||||||    
T  35987330 tttttttctctccattatttttgaccaataaaaagatagaaaaagaaggttgtcataaaaattgtaagcaaatgattgttcaaatatcattgctctt 35987426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 41112058 - 41111967
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggaga-agaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    |||||||||| |||||||||||| ||||||||||  ||| |||| | ||||| ||||| ||||| |||||  ||||||| |||||||||||||    
T  41112058 ttcctttttccctctccattgtttttgaccaatgaaaagagagagaaaagaa-gttgttaaaaaagttgtctcaaatggatgttcaaatatca 41111967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 43409346 - 43409254
Alignment:
Q  6 ttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    |||| ||||||||||||| ||||||||||  ||| ||||| || ||| |||||||| || || ||| ||||  |||||||||||||| |||||    
T  43409346 ttttttctctccattgtttttgaccaatgaaaagagagaaaaaaaagattgtcaaatagattatactaaataattgttcaaatatcaatgctc 43409254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 45528927 - 45528836
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaa-gaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcatt 94  Q
    |||| ||||||||||||||| |||||||||| |||| ||||| || | ||||||||| | | ||||| | |||||||||||||||||||||||    
T  45528927 ctttctctctctccattgtt-ttgaccaatgagaagagagaaaaaaggaggttgtcatagaagttgttagcaaatggttgttcaaatatcatt 45528836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 275315 - 275374
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaag 64  Q
    |||||||||||||||| || |||||||||| ||||  |||| | ||||||||||||||||    
T  275315 tttttctctctccattatttttgaccaatgagaagaaagaaaatgaaggttgtcaaaaag 275374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 20380871 - 20380784
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||| ||||||||||| ||||||||||  ||| ||||| ||  | ||||||| ||| |||||   ||||||||||||||||||||    
T  20380871 tttttctttctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtcacaaaagttgtttaaaatggttgttcaaatatca 20380784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 28300628 - 28300541
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    |||||||||||| |||||| ||||||||||  ||| ||||| |  || ||||||| ||  |||||| || ||||||||||||||||||    
T  28300628 tttttctctctctattgtttttgaccaatgaaaagagagaaaataaaagttgtcacaagagttgtatcatatggttgttcaaatatca 28300541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 29705992 - 29706079
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||| ||||||||| || |||||||  ||| ||||| ||  | ||||||| ||| |||||| ||||| |||||||||||||||    
T  29705992 tttttctctatccattgttttttaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatca 29706079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 35376533 - 35376442
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattg 95  Q
    ||||||||||||||||||| |||||||||   ||| ||||  ||  ||||||||| ||| |||| || ||||||||| ||||||||||||||    
T  35376533 tttttctctctccattgtttttgaccaataaaaagagagagaaatgaggttgtcataaaagttgttaacaaatggttcttcaaatatcattg 35376442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 47683879 - 47683974
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    |||||||||||| | |||| |||||||||  |||| |||||  |||||||||||  ||| ||||| || |||||||||| ||||||||||| ||||    
T  47683879 tttttctctctctaatgtttttgaccaataagaagagagaaagagaaggttgtctcaaaagttgtcacaaaatggttgtacaaatatcattactct 47683974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 54233484 - 54233429
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    |||||||||||||||||||| |||||||||  |||| ||||| || ||||||||||    
T  54233484 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtca 54233429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 14847502 - 14847412
Alignment:
Q  3 cctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatca 92  Q
    ||||||||||| || |||||| || ||||||| ||||  |||| || || |||||| ||||||||||||| ||||||||||  ||||||||    
T  14847502 cctttttctctttctattgtttttaaccaatgagaagatagaacaacaaagttgtctaaaaggttgtaccaaaatggttgtcaaaatatca 14847412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 20216033 - 20216131
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||| ||| ||||||| |||||| || | ||| ||||| ||  ||||||||| |||  |||| |  ||||||||||||||||||||||||||    
T  20216033 ttcctttttctttctgcattgtttttgaccgatagaaagagagaaaaatgaggttgtcacaaaaattgttagtaaatggttgttcaaatatcattgctc 20216131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 20714328 - 20714386
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| |||||||||  ||||  |||| || ||||||||||    
T  20714328 ttcctttttctctctccattgtttttgaccaataagaagatagaaaaataaggttgtca 20714386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 30400142 - 30400084
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || ||| ||||||    
T  30400142 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtca 30400084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 36819045 - 36819099
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||| |||||||||  |||| ||||| || ||||||||||    
T  36819045 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtca 36819099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 37035701 - 37035799
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||||| ||||| || ||||||   ||| ||| | || || |||||||| || ||||| | ||||| |||||||||||||||||||||    
T  37035701 ttcctttttctctctcctttgtttttaaccaataaaaagagaggaaaaaaaagttgtcaagaaagttgttagcaaatagttgttcaaatatcattgctc 37035799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 51385422 - 51385336
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtac-caaatggttgttcaaatat 90  Q
    ||||||||||||||||||| ||||||||||  ||| ||||| || | |||||||  ||| |||||||  |||| |||||||||||||    
T  51385422 tttttctctctccattgtttttgaccaatgaaaagagagaacaacatggttgtcccaaaagttgtactaaaatagttgttcaaatat 51385336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 52454078 - 52453980
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||  || || |||||||  || ||||| |  |||||| ||| |||||||||||||||    
T  52454078 ttcctttttctctctccattgtttttgaccaataagaagagagagaaacaaagttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 52453980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 55344278 - 55344176
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca-aaaaggttgtaccaaatggttgttcaaatatcattgctctttta 103  Q
    |||||||||||| |||||| || |||||||  ||| ||||| |  || ||||||| |||| ||||||  |||| ||||||||||||||| | ||||||||    
T  55344278 tttttctctctctattgtttttaaccaatgaaaagagagaaaagaaaagttgtcataaaatgttgtatgaaatagttgttcaaatatcactactctttta 55344179  T
Q  104 aaa 106  Q
    |||    
T  55344178 aaa 55344176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 622445 - 622364
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgt 82  Q
    |||||||||||||||| |||||| | |||||||| |||| ||||| |  || |||||||| || |||||  |||||||||||    
T  622445 ttcctttttctctctctattgttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcacaaatggttgt 622364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 8066440 - 8066473
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  8066440 ttcctttttctctctccattgtttttgaccaatg 8066473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 16479682 - 16479629
Alignment:
Q  48 agaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctcttt 101  Q
    |||| ||||||| ||| ||||||| |||||||||| ||||||||||| ||||||    
T  16479682 agaaagttgtcacaaaagttgtacaaaatggttgtacaaatatcatttctcttt 16479629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 26279969 - 26280002
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  26279969 ttcctttttctctctccattgtttttgaccaatg 26280002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 28269891 - 28269924
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  28269891 ttcctttttctctctccattgtttttgaccaatg 28269924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 33007445 - 33007478
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  33007445 ttcctttttctctctccattgtttttgaccaatg 33007478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 38296645 - 38296548
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaatatcattgctctt 100  Q
    |||||||| ||||||||||  |||||||||  |||||||||| |  ||||||||| ||||  || || |||| | ||||||||||||||||| |||||    
T  38296645 ctttttctttctccattgtgtttgaccaataagaagggagaatatcaaggttgtccaaaaaattataacaaaagagttgttcaaatatcattactctt 38296548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 39604232 - 39604199
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  39604232 ttcctttttctctctccattgtttttgaccaatg 39604199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 41877597 - 41877564
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  41877597 ttcctttttctctctccattgtttttgaccaatg 41877564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 48205130 - 48205219
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaata 89  Q
    ||||||||||||||| ||||||| |||| ||||| ||||  | || || |||||||||| ||| ||||||| ||| | ||||||||||||    
T  48205130 ttcctttttctctctacattgttattgatcaatgagaagaaaaaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 48205219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 50745634 - 50745667
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  50745634 ttcctttttctctctccattgtttttgaccaatg 50745667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 51410891 - 51410924
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  51410891 ttcctttttctctctccattgtttttgaccaatg 51410924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 51672948 - 51672981
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  51672948 ttcctttttctctctccattgtttttgaccaatg 51672981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 5114128 - 5114076
Alignment:
Q  48 agaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    |||| |||||||||||  |||||  |||||||||||||||||||||| |||||    
T  5114128 agaaagttgtcaaaaaaattgtaaaaaatggttgttcaaatatcatttctctt 5114076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 22153949 - 22154049
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||  || || | ||||||||  ||| ||| | | ||| |||||||  || |||||||||||||||||| ||||||||| | |||||    
T  22153949 ttcctttttctctctctgttattttggaccaatgaaaagagagcaaatgaaagttgtcattaaagttgtaccaaatggttgtacaaatatcactactctt 22154048  T
Q  101 t 101  Q
    |    
T  22154049 t 22154049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 25142713 - 25142745
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  25142713 ttcctttttctctctccattgtttttgaccaat 25142745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 28263630 - 28263662
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  28263630 ttcctttttctctctccattgtttttgaccaat 28263662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 29846877 - 29846777
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgta-ccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| || ||||| |  ||| ||| | || |||||||||  ||| |||||| | |||  ||||||||||||||||| ||||    
T  29846877 ttcctttttctctctccattgttttttaccaacgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 29846778  T
Q  100 t 100  Q
    |    
T  29846777 t 29846777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 35272112 - 35272144
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  35272112 ttcctttttctctctccattgtttttgaccaat 35272144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 41877773 - 41877805
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  41877773 ttcctttttctctctccattgtttttgaccaat 41877805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 49130939 - 49131030
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggaga-agaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||||||| ||||| ||||  ||| |||| | ||||| ||||||| |||  ||||  ||||||| |||||||||||||    
T  49130939 ttcctttttctctctccattgtttttgactaatgaaaagagagagaaaagaa-gttgtcacaaaaattgtctcaaatggatgttcaaatatca 49131030  T

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Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 51921498 - 51921530
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  51921498 ttcctttttctctctccattgtttttgaccaat 51921530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 5e-44; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 15639470 - 15639568
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15639470 ttcctttttctctctccattgttcttcaccaatgagaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 15639568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 24792538 - 24792641
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24792538 ttcctttttctctctccattgtt-ttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttgtaccaaatggttgttcaaatatcattgctctt 24792636  T
Q  101 ttaaa 105  Q
    |||||    
T  24792637 ttaaa 24792641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 9636144 - 9636047
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9636144 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttgtaccaaatggttgttcaaatatcattgctc 9636047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 7144660 - 7144757
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||||| ||||| |||||||||   ||| ||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  7144660 ttcctttttctctctcctttgttattgaccaataaaaagagagaaaaagaaggttgtcaaaaaggttgtatcaaatggttgctcaaatatcattgctc 7144757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 91300 - 91400
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||| ||||||| ||||||||||  ||| ||||| |  |||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  91300 ttcctttttctctcttcattgtttttgaccaatgaaaagagagaaaagaaaggttgtcaaataggttgtatcaaatggttgttcaaatatcattgctctt 91399  T
Q  101 t 101  Q
    |    
T  91400 t 91400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 36581453 - 36581355
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| |||||||||   ||| || || | ||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  36581453 ttcctttttctctctccattgtttttgaccaataaaaagagaaaaaatgaaggttgtcaaataggttgtacaaaatggttgttcaaatatcattgctct 36581355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 582855 - 582758
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||||| ||||| ||||||||||  ||| ||||  |||||||||||||||||  |||||||||||| ||||||||||||||||||||    
T  582855 ttcctttttctctctcctttgtttttgaccaatgaaaagagagagaaagaaggttgtcaaaaatcttgtaccaaatgattgttcaaatatcattgctc 582758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 12613003 - 12612909
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcatt 94  Q
    ||||||||| ||||||||||||| |||||||||| |||| ||||| || |||||||||  ||| |||||||| ||||||||||||||||||||||    
T  12613003 ttcctttttatctctccattgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaatggttgttcaaatatcatt 12612909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 26626801 - 26626704
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctttt 102  Q
    ||||||||||||||||||| |||||||||   ||  ||||| || ||||||||||  || |||||| |||||||||||||||||||||||||||||||    
T  26626801 tttttctctctccattgtttttgaccaataacaaaagagaaaaaaaaggttgtcatgaaagttgtaacaaatggttgttcaaatatcattgctctttt 26626704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 32732101 - 32732002
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggaga---agaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctcttt 101  Q
    ||||||||||||||||||| ||||| |||  |||| ||||   |||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  32732101 tttttctctctccattgtttttgactaataagaagagagagagagaaaaaagttgtcataaagattgtaccaaatggttgttcaaatatcattgctcttt 32732002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 39595359 - 39595452
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcatt 94  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| ||  | ||||||| ||| |||||| |||||||||||||||||||||||    
T  39595359 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatatcatt 39595452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 26627416 - 26627512
Alignment:
Q  2 tcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    |||||||||||||||||||||| ||||||| |   ||  ||||| |||||||||||||  || |||||||||||| |||||||||||||||||||||    
T  26627416 tcctttttctctctccattgtttttgaccattaataaaagagaaaaagaaggttgtcatgaaagttgtaccaaatagttgttcaaatatcattgctc 26627512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 5698310 - 5698216
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||| |||||||||   ||  ||||| |||||||||||||  || ||||||||||||| |||||| ||||||||||||||    
T  5698310 tttttctctctccattgtttttgaccaataacaaaagagaaaaagaaggttgtcatgaaagttgtaccaaatgattgttctaatatcattgctct 5698216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 28904081 - 28904180
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaa----tggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||| |||||||||   ||  ||||| | ||||||||||||| |||||||||||||    |||||||||||||||||||||||||    
T  28904081 tttttctctctccattgtttttgaccaataaaaaaagagaaaaggaaggttgtcaaataggttgtaccaaataattggttgttcaaatatcattgctctt 28904180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 28940476 - 28940575
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaa----tggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||| |||||||||   ||  ||||| | ||||||||||||| |||||||||||||    |||||||||||||||||||||||||    
T  28940476 tttttctctctccattgtttttgaccaataaaaaaagagaaaaggaaggttgtcaaataggttgtaccaaataattggttgttcaaatatcattgctctt 28940575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 38387796 - 38387893
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||||| | || |||| ||||  |||| ||||| || ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  38387796 ttcctttttctctctccaatatttttgatcaataagaagagagaaaaaaaaa-ttgtcataaaggttgtaccaaatggttgttcaaatatcattgctct 38387893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4173110 - 4173021
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaata 89  Q
    ||||||||||||||||||||||| |||||||||| ||||  |||| || |||||||||| ||||||||||| ||| | ||||||||||||    
T  4173110 ttcctttttctctctccattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaggttgtactaaaagagttgttcaaata 4173021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 13734342 - 13734249
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||||||| ||||||||||  ||| ||||| | ||| ||||||||| || |||||||||||||||||||| |||  |||||||    
T  13734342 tttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaagttgtcaaatagattgtaccaaatggttgttcatatacaattgctc 13734249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 20040871 - 20040959
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||| ||||||||||||||||| |||||||||| |||| |||||||||            |||||||||||||||||||||||||||||||||||||||    
T  20040871 ttcctgtttctctctccattgtttttgaccaatgagaagagagaagaag------------aaggttgtaccaaatggttgttcaaatatcattgctctt 20040958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 11880973 - 11880875
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||| ||||||||| |||||||||| |||| ||||| |||||||||||||   | |||| || |||||| ||||| ||||||||||||||    
T  11880973 ttcctttttctctttccattgtttttgaccaatgagaagagagaaaaagaaggttgtcattgaagttgttagcaaatgattgttaaaatatcattgctc 11880875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 17574210 - 17574108
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||| ||||||||| ||||||| || ||||  |||| || |||||||||  ||| |||||||| |||| ||||||||||||||||| ||||    
T  17574210 ttcctttttctctatccattgtttttgaccagtgagaagaaagaacaacaaggttgtcccaaaagttgtaccaaaatagttgttcaaatatcattactct 17574111  T
Q  100 ttt 102  Q
    |||    
T  17574110 ttt 17574108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 19437345 - 19437439
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||| |||||| |||||||||   ||| ||||| |  |||||||||||||| ||||||| |||| ||||||||||||||| |||||    
T  19437345 ctttttctctctctattgtttttgaccaatcaaaagagagaaaagaaaggttgtcaaaaatgttgtactaaatagttgttcaaatatcagtgctc 19437439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 43153046 - 43152952
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcatt 94  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||| || || ||||||  ||  |||||||| |||| |||||||||||||||||    
T  43153046 ttcctttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtcctaagagttgtaccaaaatagttgttcaaatatcatt 43152952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 3518272 - 3518360
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatca 92  Q
    ||||||||||||||||||| |||||||||| |||| ||||| || || ||||||  |||||||||||| ||||||||||  ||||||||    
T  3518272 tttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatca 3518360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 6865770 - 6865674
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    |||||||||||||||||||| ||||||||||  ||| ||||| |  || ||||||||| || || || ||||| ||||||||||||| |||||||||    
T  6865770 ctttttctctctccattgtttttgaccaatgaaaagagagaaaataaaagttgtcaaatagattatatcaaatagttgttcaaatattattgctctt 6865674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 34381097 - 34381188
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| ||  | ||||||| |||  || || |||||||||||||||||||||    
T  34381097 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaacgaagttgtcacaaaaattatatcaaatggttgttcaaatatca 34381188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 23991316 - 23991410
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcatt 94  Q
    ||||||||||| |||| |||||| ||||||||||  ||| ||||| ||  ||||| ||||||| |||| || |||||||||||||||||||||||    
T  23991316 ttcctttttctttctcaattgtttttgaccaatgaaaagagagaaaaatgaggttctcaaaaaagttgttagcaaatggttgttcaaatatcatt 23991410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 10469931 - 10469859
Alignment:
Q  3 cctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaa 75  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| || || ||||||  |||| ||||||||||    
T  10469931 cctttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaagattgtaccaaa 10469859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 17063950 - 17064050
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| || |||||||  ||| ||||  ||  ||||||||| ||| |||| || |||||| |||||||| ||||||||||||    
T  17063950 ttcctttttctctctccattgtttttaaccaatgaaaagagagagaaatgaggttgtcataaaagttgttagcaaatgattgttcaagtatcattgctct 17064049  T
Q  100 t 100  Q
    |    
T  17064050 t 17064050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 125177 - 125268
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||| |||||| |||||| ||||||||||  ||| ||||| ||  | ||||||  ||| |||||| |||||||||||||||||||||    
T  125177 ttcctttttttctctctattgtttttgaccaatgaaaagagagaaaaaagaagttgtcgcaaaagttgtatcaaatggttgttcaaatatca 125268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 3960152 - 3960057
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctc 98  Q
    |||||||||||||||||||| |||| |||||  ||| || || ||  |||||||||  || ||||| | |||||||||||||||||||||||||||    
T  3960152 ctttttctctctccattgtttttgatcaatgaaaagagaaaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctc 3960057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 7080606 - 7080694
Alignment:
Q  8 ttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    |||||||||||||||| |||||||||  |||| ||||| || ||  || ||| ||||||| ||||||||| |||||||||||| |||||||    
T  7080606 ttctctctccattgtttttgaccaataagaagagagaaaaaaaa--ttatcataaaggttataccaaatgattgttcaaatattattgctc 7080694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 30574363 - 30574256
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || || |||||||  ||  |||| |   ||||| ||| ||||||||||||||||    
T  30574363 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcatggaatggatgtacaaatatcattgctct 30574264  T
Q  100 tttaaaat 107  Q
    ||||||||    
T  30574263 tttaaaat 30574256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 41210495 - 41210412
Alignment:
Q  6 ttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaat 88  Q
    ||||||||||| |||||| |||||||||  |||| ||||| ||| ||||||||| ||| |||| || |||||||||||||||||    
T  41210495 ttttctctctctattgtttttgaccaataagaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttgttcaaat 41210412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 41460205 - 41460300
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||| || |||||||  ||| ||||| ||  |||||||||  || ||||| | ||||||||||||||||||| ||||||||    
T  41460205 tttttctctctccattgtttttaaccaatgaaaagagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatattattgctct 41460300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 12512878 - 12512980
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || ||| ||||||  || ||||| |   ||||| ||| ||||||||||||||||    
T  12512878 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatggatgtacaaatatcattgctct 12512977  T
Q  100 ttt 102  Q
    |||    
T  12512978 ttt 12512980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 15622129 - 15622187
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || ||||||||||    
T  15622129 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtca 15622187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 36624406 - 36624496
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcatt 94  Q
    |||||||||||| ||||||| ||||||||||  ||| ||||| | |||  |||||||| |  ||||| |||||| ||||||||||||||||    
T  36624406 ctttttctctcttcattgtttttgaccaatgaaaagagagaaaatgaaaattgtcaaataaattgtatcaaatgcttgttcaaatatcatt 36624496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 9957187 - 9957098
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaata 89  Q
    ||||||||||||||||||||||| |||||||||  ||||  |||| || |||||||||| |||  |||||| ||| | ||||||||||||    
T  9957187 ttcctttttctctctccattgttattgaccaattagaagaaagaataataaggttgtcacaaaaattgtactaaaagagttgttcaaata 9957098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 33567218 - 33567125
Alignment:
Q  8 ttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctcttt 101  Q
    |||||||||||||||| ||||||||||  ||| ||||| ||  |  |||||| ||| |||||| |||||||||||||| |||||| | ||||||    
T  33567218 ttctctctccattgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatcaaatggttgttcatatatcactactcttt 33567125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 35358917 - 35358829
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatca 92  Q
    |||||||||||| |||||| ||| |||||| |||| ||||| || || ||||||  |||||||||||| ||||||||| | ||||||||    
T  35358917 tttttctctctctattgtttttgtccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgctaaaatatca 35358829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 40566199 - 40566111
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaaga-agaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||| ||||||||||  ||| ||||| | | || ||||| ||||| |||||  ||||||| |||||||||||||    
T  40566199 tttttctctctccattgtttttgaccaatgaaaagagagaaaataaaaagttgttaaaaaagttgtctcaaatggatgttcaaatatca 40566111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 28811517 - 28811604
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||| ||||||||||  ||| ||||| ||  ||||||||| ||| |||||  ||||| | | |||||||||||    
T  28811517 tttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatattcaaatatca 28811604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 31284377 - 31284283
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggaga-agaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    |||||||||||||||||||| || |||||||  ||| |||| | ||||| ||||||  ||| ||||||  |||||||||||||||||||| |||||    
T  31284377 ctttttctctctccattgtttttaaccaatgaaaagagagagaaaagaa-gttgtcgcaaaagttgtatgaaatggttgttcaaatatcactgctc 31284283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 33823677 - 33823622
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    |||||||||||||||||||| |||||||||  |||| ||||| || ||||||||||    
T  33823677 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtca 33823622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 2117619 - 2117525
Alignment:
Q  8 ttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctttt 102  Q
    |||||||||||||||| || |||||||  ||  ||||| ||  | ||||||| ||| |||||| ||||| ||||||||||||||| | |||||||    
T  2117619 ttctctctccattgtttttaaccaatgaaaaaagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactctttt 2117525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 4954551 - 4954609
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| |||||| ||  |||| ||||| || ||||||||||    
T  4954551 ttcctttttctctctccattgtttttgacccataagaagagagaaaaacaaggttgtca 4954609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 5005198 - 5005272
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaa 75  Q
    |||||||||||||||| |||||| ||||||||||  ||| ||||| || || ||||||  ||| |||||||||||    
T  5005198 ttcctttttctctctctattgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaa 5005272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 9596800 - 9596742
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || ||| ||||||    
T  9596800 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtca 9596742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10522860 - 10522918
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    |||||||||||||||||||| || |||||||||  |||| ||||| || ||||||||||    
T  10522860 ttcctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgtca 10522918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 22920474 - 22920420
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||| |||||||||  |||| ||||| || ||||||||||    
T  22920474 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtca 22920420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 28501702 - 28501760
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    |||| |||||||||||||||||| |||||||||  |||| ||||| || ||||||||||    
T  28501702 ttcccttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtca 28501760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 29803312 - 29803406
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctc 98  Q
    |||||||||||| |||||| |||||||||   ||| ||||| ||| |||||||||  || |||| || |||||  ||||||||||||||||||||    
T  29803312 tttttctctctctattgtttttgaccaataataagagagaaaaaggaggttgtcatcaaagttgttagcaaataattgttcaaatatcattgctc 29803406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 2863634 - 2863727
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcatt 94  Q
    |||||||||||||||||||| || ||||||||||  ||| || || || |||||||||  |||  |||||| ||||  ||||| ||||||||||    
T  2863634 ttcctttttctctctccattatttttgaccaatgaaaagagataacaacaaggttgtcccaaaaattgtactaaataattgtttaaatatcatt 2863727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 3723058 - 3722969
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcatt 94  Q
    ||||||||||||||||||| | |||||||   ||| ||||| | ||| |||||||  || ||||| |||||||||||| || ||||||||    
T  3723058 tttttctctctccattgttttggaccaataaaaagagagaaaatgaaagttgtcatcaaagttgtcccaaatggttgtacatatatcatt 3722969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 9714122 - 9714089
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  9714122 ttcctttttctctctccattgtttttgaccaatg 9714089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 12718366 - 12718333
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  12718366 ttcctttttctctctccattgtttttgaccaatg 12718333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 12779592 - 12779559
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  12779592 ttcctttttctctctccattgtttttgaccaatg 12779559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 19376118 - 19376085
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  19376118 ttcctttttctctctccattgtttttgaccaatg 19376085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 20719998 - 20719910
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggaga-agaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||| || ||||||||||  ||| |||| | ||||| ||||||| ||| |||||  ||||||| |||||||||||||    
T  20719998 ctttttctctctccattatttttgaccaatgaaaagagagagaaaagaa-gttgtcacaaaagttgtctcaaatggatgttcaaatatca 20719910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 34
Target Start/End: Complemental strand, 30334748 - 30334719
Alignment:
Q  5 tttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||||||||||    
T  30334748 tttttctctctccattgttcttgaccaatg 30334719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 38919941 - 38920022
Alignment:
Q  11 tctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaatatc 91  Q
    |||||| ||| || |||||||||| |||| ||||| || |||||||||  ||| ||||||||||| | ||||||||||||||    
T  38919941 tctctctattatttttgaccaatgagaagagagaacaacaaggttgtcctaaaagttgtaccaaaagagttgttcaaatatc 38920022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 42909804 - 42909837
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  42909804 ttcctttttctctctccattgtttttgaccaatg 42909837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 5130364 - 5130272
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca-aaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||||||| || |||||||  ||| ||||| ||  | ||||||| ||||  |||||  |||| |||||||||||||||    
T  5130364 ttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaaaattgtatgaaatagttgttcaaatatca 5130272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 8787139 - 8787051
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||| |||||| || |||||| |  || || || |||||  |||||| | | |||||||||||||||||| |||||||||    
T  8787139 ctttttctctctctattgtttttaaccaatagagagagaaaaaaagaaaattgtcatacaagttgtaccaaatggttgtacaaatatca 8787051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 14323954 - 14323922
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  14323954 ttcctttttctctctccattgtttttgaccaat 14323922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 19271944 - 19271976
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  19271944 ttcctttttctctctccattgtttttgaccaat 19271976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 27392684 - 27392600
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaata 89  Q
    ||||||||||||||||||| ||||||||||  ||| || || ||  | ||||||| ||| |||||  || |||||||||||||||    
T  27392684 tttttctctctccattgtttttgaccaatgaaaagagaaaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaata 27392600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 38010957 - 38010989
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  38010957 ttcctttttctctctccattgtttttgaccaat 38010989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 40201102 - 40201018
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaata 89  Q
    |||| |||||| ||||||| |||||||||| ||||  |||| || |||||||||| ||| ||||||| |||   |||||||||||    
T  40201102 ttttcctctcttcattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaagttgtacaaaaaaattgttcaaata 40201018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 41192672 - 41192704
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  41192672 ttcctttttctctctccattgtttttgaccaat 41192704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 12045639 - 12045538
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||||||| |||||||||| |||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12045639 ttcctttttctctctccattgtttttgaccaatgagaagagacaagaagaaggttgtcaaaaaggttataccaaatggttgttcaaatatcattgctctt 12045540  T
Q  101 tt 102  Q
    ||    
T  12045539 tt 12045538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 42443195 - 42443292
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctttt 102  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  42443195 tttttttctctccattgtttttgaccaatgagaagggagaagaagaaggttgtcaaaaaatttgtaccaaatagttgttcaaatatcattgctctttt 42443292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 1796568 - 1796665
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| | ||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  1796568 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtaacaaatggttgttcaaatatcattgctc 1796665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 6005029 - 6005127
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||| ||||||||||||| ||||||||||  ||| ||||| | ||| ||||||||| | ||||||||||||||||||||||| |||||||||||    
T  6005029 ttcctttttttctctccattgtttttgaccaatgaaaagagagaaaaggaaagttgtcaaataagttgtaccaaatggttgttcaaacatcattgctct 6005127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 36740401 - 36740494
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||||||| |||| |||||  ||| ||||| | ||||||||||||| || ||||| |||||||||||||||||||||||||||    
T  36740401 tttttctctctccattgtttttgatcaatgaaaagagagaaaatgaaggttgtcaaatagattgtatcaaatggttgttcaaatatcattgctc 36740494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 38174228 - 38174128
Alignment:
Q  8 ttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctcttttaaaa 106  Q
    |||||||||||||||| |||||||||| | || ||||  ||| ||||||||| | | ||||| | ||||||||||||||||||||||||||||| |||||    
T  38174228 ttctctctccattgtttttgaccaatgaggagagagagaaaggaggttgtcatagaagttgttagcaaatggttgttcaaatatcattgctcttataaaa 38174129  T
Q  107 t 107  Q
    |    
T  38174128 t 38174128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 9046239 - 9046334
Alignment:
Q  2 tcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgct 97  Q
    |||||||| |||||||||||||  ||||||||  |||||||||| ||||||||||| |  || ||||| |||||| ||||||| ||||||||||||    
T  9046239 tcctttttttctctccattgtttctgaccaataagaagggagaaaaagaaggttgttatgaaagttgttccaaatagttgttccaatatcattgct 9046334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 5782885 - 5782967
Alignment:
Q  13 tctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattg 95  Q
    |||| |||||| |||| |||||  ||| ||||| | ||| ||||||||| |||||||||||||||||||||||||||||||||    
T  5782885 tctctattgtttttgatcaatgaaaagagagaaaatgaaagttgtcaaataggttgtaccaaatggttgttcaaatatcattg 5782967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 32725764 - 32725671
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    |||||||||||| |||||| ||||||||||  ||| ||||| | ||||||||||||| || || ||| |||| |||||| ||||||||||||||    
T  32725764 tttttctctctctattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaatagattatactaaatagttgtttaaatatcattgctc 32725671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 8233478 - 8233383
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtac-caaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||| |||||||||| |||| ||||| || |||||| || |||| |||||||  |||| | ||||||||||||||| ||||    
T  8233478 tttttctctctccattgtttttgaccaatgagaagagagaacaacaaggttatccaaaaagttgtacaaaaatagatgttcaaatatcattactct 8233383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 9001000 - 9000901
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||| | ||  |||||| ||  || |||| || ||||||||||||||||||||||||||||    
T  9001000 ttcctttttctctctccattgtttttgaccaatgaaaagagagtaaaatgaggttgacattaaagttgttagcaaatggttgttcaaatatcattgctct 9000901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 37524414 - 37524323
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| ||  ||||||||| ||||||| |  ||||| | |||||||||||||    
T  37524414 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaggttatttcaaatagatgttcaaatatca 37524323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 44380597 - 44380502
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||| |||||| |||||||||   ||  ||||| |  |||||||||||||||||||||| |||| |||||| |||||||| ||||||    
T  44380597 ctttttctctctctattgtttttgaccaatcaaaaaagagaaaagaaaggttgtcaaaaaggttgtactaaatagttgtttaaatatcagtgctct 44380502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 5742640 - 5742538
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcattgctctttt 102  Q
    |||||||||||||||||||| |||||||||| |||| ||||| || || ||||||  ||||| |||||| ||||||||||  |||||||| | ||||| |    
T  5742640 ctttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggatgtaccaaaatggttgtcaaaatatcactactcttat 5742541  T
Q  103 aaa 105  Q
    |||    
T  5742540 aaa 5742538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 20995044 - 20994950
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcatt 94  Q
    |||||||||||||||| |||||| |||||||||  |||| ||||| | | ||||||||| ||| ||||| |||| | ||||||||||||||||||    
T  20995044 ttcctttttctctctctattgtttttgaccaataagaagagagaaaaggtaggttgtcacaaaagttgtcaccagaaggttgttcaaatatcatt 20994950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 30578343 - 30578437
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||||||| ||||||||||  ||| ||||| ||| |||||||||  || ||||| | |||||  ||||||||||||||||||||    
T  30578343 tttttctctctccattgtttttgaccaatgataagagagaaaaaggaggttgtcatcaaagttgtcagcaaataattgttcaaatatcattgctc 30578437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 36524738 - 36524640
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctc 98  Q
    |||||||||||||||| |||| | |||| ||||| |||| ||||| ||  ||| ||||| ||| ||||| | |||||||||||||||||||||||||||    
T  36524738 ttcctttttctctctcaattgcttttgatcaatgagaagagagaaaaatgaggctgtcataaaagttgttagcaaatggttgttcaaatatcattgctc 36524640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 14548811 - 14548711
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| || ||||||| |||| ||||| ||  |||||||||   | |||| || ||||| |||||| |||||||||||||||    
T  14548811 ttcctttttctctctccattgttttttaccaatgagaagagagaaaaatgaggttgtcattgaagttgttagcaaatagttgttaaaatatcattgctct 14548712  T
Q  100 t 100  Q
    |    
T  14548711 t 14548711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 20853004 - 20853097
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaa--ggttgtaccaaatggttgttcaaatatcatt 94  Q
    ||||||||||||||||||||||| || ||||||  ||| | |||| |||||| ||||||||||  | |||||||||||| ||||||||||||||||    
T  20853004 ttcctttttctctctccattgtt-ttaaccaataagaaag-agaaaaagaagattgtcaaaaaaagattgtaccaaatgattgttcaaatatcatt 20853097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23258117 - 23258217
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||| ||||||||| ||||||||||  ||| ||||| ||  | ||||||| |||  ||||  ||||||||||||||||||||| | |||||    
T  23258117 ttcctttttctctttccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaaattgtttcaaatggttgttcaaatatcactactctt 23258216  T
Q  101 t 101  Q
    |    
T  23258217 t 23258217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 28927766 - 28927857
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggaga-agaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||||||| ||||||||||  ||| |||| | ||||| ||||||| |||  || || |||||||||||||||||||||    
T  28927766 ttcctttttctctctccattgtttttgaccaatgaaaagagagagaaaagaa-gttgtcacaaaaattttatcaaatggttgttcaaatatca 28927857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 30927914 - 30927819
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctc 98  Q
    |||||||||||||||||||| |||||||||  |||| ||||| || ||||||||||  || ||||| |  |||||| ||| |||||||||||||||    
T  30927914 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 30927819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 34838256 - 34838157
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaatatcattgctct 99  Q
    |||||||||||||||| |||||| |||||||||  |||| ||  | || |||||||||  ||| ||||||||||| | ||||||||||||||| ||||||    
T  34838256 ttcctttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcctaaaagttgtaccaaaagagttgttcaaatatcactgctct 34838157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 69559 - 69513
Alignment:
Q  54 ttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    |||||||| |||||||| |||||||||||||||||| ||||||||||    
T  69559 ttgtcaaataggttgtatcaaatggttgttcaaatagcattgctctt 69513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 2597146 - 2597088
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || ||||||||||    
T  2597146 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtca 2597088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 28156288 - 28156358
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtac 71  Q
    |||||||||||||||||| |||| |||||||||| |||| ||||| || || ||||||  |||||||||||    
T  28156288 ttcctttttctctctccaatgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtac 28156358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 38844773 - 38844679
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||||||| |||||||||  |||| ||||  ||  ||||||||| |||  ||| || |||||||||||||||||||||| ||||    
T  38844773 tttttctctctccattgtttttgaccaataagaagagagagaaaagaggttgtcataaaaattgttaacaaatggttgttcaaatatcatggctc 38844679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 40413344 - 40413258
Alignment:
Q  6 ttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    |||||||||||||||||| ||||| ||||  ||| ||||| ||  | ||| ||| ||| |||||| |||||||||||||||||||||    
T  40413344 ttttctctctccattgtttttgactaatgaaaagagagaaaaaagaagttatcataaaagttgtatcaaatggttgttcaaatatca 40413258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 41273600 - 41273702
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || |||||||| |  || ||||| |   ||||| ||| ||||||||||||||||    
T  41273600 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgttactaaagttgtcatggaatggatgtacaaatatcattgctct 41273699  T
Q  100 ttt 102  Q
    |||    
T  41273700 ttt 41273702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 41776264 - 41776362
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgta-ccaaatggttgttcaaatatcattgctctttt 102  Q
    ||||||||||||||||||| ||||||||||  ||| ||| | || |||||||||  ||| |||||| | |||  ||||||||||||||||| |||||||    
T  41776264 tttttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctttt 41776362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 42651013 - 42651099
Alignment:
Q  9 tctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcatt 94  Q
    |||||||| |||||| || ||||||| |||| ||||| || |||||||||  ||| |||||||| |||| |||||||||||||||||    
T  42651013 tctctctctattgtttttaaccaatgagaagagagaacaacaaggttgtctcaaaagttgtaccaaaatagttgttcaaatatcatt 42651099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 45405814 - 45405720
Alignment:
Q  8 ttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcattgctcttt 101  Q
    ||||||||  |||||| |||||||||| |||| ||||| || || ||||||  |||||||||||| ||||||||||| |||||||| | ||||||    
T  45405814 ttctctctttattgtttttgaccaatgagaagagagaacaataaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 45405720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 7678817 - 7678910
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcatt 94  Q
    ||||||||| ||||||||||||| || |||||||  ||| ||||| ||  | ||||| | ||| |||||| ||||| |||||||||||||||||    
T  7678817 ttcctttttttctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgttacaaaagttgtatcaaatagttgttcaaatatcatt 7678910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 22767215 - 22767308
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcatt 94  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| ||  | ||||||| ||| |||||  || | ||||||||||||| ||||    
T  22767215 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtctcatacggttgttcaaataacatt 22767308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 43605648 - 43605555
Alignment:
Q  8 ttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||| |||||| |||||||||  |||| ||||| | | ||||||||| ||| ||||| || ||| |||||||||||||||||| |||||    
T  43605648 ttctctctctattgtttttgaccaataagaagagagaaaaggtaggttgtcacaaaagttgtcactaaaaggttgttcaaatatcattactctt 43605555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 6849247 - 6849147
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||| ||| ||||| |||||||||   ||  ||||| ||||| ||||||| ||| ||||| |  |||||| ||||||||||||||||||||    
T  6849247 ttcctttttctctatccgttgtttttgaccaataaaaaaagagaaaaagaaagttgtcataaaagttgttagaaaatggctgttcaaatatcattgctct 6849148  T
Q  100 t 100  Q
    |    
T  6849147 t 6849147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 22203201 - 22203101
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgta-ccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||| ||||||||| |||||||||   ||| ||| | || |||||||||  ||| |||||| | |||  ||||||||||||||||||||||    
T  22203201 ttcctttttctctttccattgtttttgaccaatcaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattgctct 22203102  T
Q  100 t 100  Q
    |    
T  22203101 t 22203101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 25430731 - 25430823
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaatatca 92  Q
    |||||||||||||||| |||||| |||||||||  |||| ||  | || |||||||||  ||| ||||||||||| | |||||||||||||||    
T  25430731 ttcctttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatca 25430823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 30925640 - 30925549
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca-aaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||||||| || |||||||  ||| ||||| || || |||||||  ||| ||||||  ||||||||||||||||||||    
T  30925640 ttcctttttctctctccattgtttttaaccaatgaaaagagagaa-aaaaaagttgtcaccaaaagttgtataaaatggttgttcaaatatca 30925549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 44001144 - 44001240
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaatatcattgctct 99  Q
    |||||||||||||||||||  |||||||||  |||||||||| |  ||||||||| ||||   |||| |||| | ||||||||||||||||| ||||    
T  44001144 ctttttctctctccattgtatttgaccaataagaagggagaacatcaaggttgtccaaaaaaatgtaacaaaagagttgttcaaatatcattactct 44001240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 1422685 - 1422594
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgta-ccaaatggttgttcaaatatcatt 94  Q
    |||||||||||||||||||| ||||||||||  ||   |||| || |||||||||  ||| |||||| | |||| |||||||||||||||||    
T  1422685 ctttttctctctccattgtttttgaccaatgaaaaaatagaataacaaggttgtcccaaaagttgtatcaaaatagttgttcaaatatcatt 1422594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 18550064 - 18550163
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||| |||||| |||| ||||  |||| ||  | || |||||||||  ||| |||||||| |||| ||||||||||||||||| ||||    
T  18550064 ttcctttttctctctctattgtttttgatcaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaatagttgttcaaatatcattactct 18550163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 20284827 - 20284886
Alignment:
Q  36 gaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcatt 94  Q
    |||| ||||| ||||||||||||| ||| ||||| | |||||||||||||||||||||||    
T  20284827 gaagagagaaaaagaaggttgtcacaaaagttgtcatcaaatggttgttcaaatatcatt 20284886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 21071456 - 21071515
Alignment:
Q  36 gaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcatt 94  Q
    |||| ||||| ||||||||||||| ||| ||||| | |||||||||||||||||||||||    
T  21071456 gaagagagaaaaagaaggttgtcacaaaagttgtcatcaaatggttgttcaaatatcatt 21071515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 5502445 - 5502548
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggaga---agaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgct 97  Q
    ||||||||||||||||||||||| ||||||||||  |||  |||   ||||||| ||||||| |||  || || |||||| |||||||||||||| | ||    
T  5502445 ttcctttttctctctccattgtttttgaccaatgaaaagatagagagagaagaa-gttgtcacaaaaattatatcaaatgattgttcaaatatcactact 5502543  T
Q  98 ctttt 102  Q
    |||||    
T  5502544 ctttt 5502548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19723192 - 19723134
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| ||||| |||  |||| ||||| || ||||||||||    
T  19723192 ttcctttttctctctccattgtttttgactaataagaagagagaaaaacaaggttgtca 19723134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 22836125 - 22836023
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgta-ccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||| | || |||||| ||  |||  ||||| | |||  ||||||||||||||||| ||||    
T  22836125 ttcctttttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttatcccaaaaattgtagcaaaaaagttgttcaaatatcattactct 22836026  T
Q  100 ttt 102  Q
    |||    
T  22836025 ttt 22836023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34641638 - 34641676
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaag 39  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  34641638 ttcctttttttctctccattgttattgaccaatgggaag 34641676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 37562127 - 37562069
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||| ||||||||||| |||||||||  |||| ||||| || ||||||||||    
T  37562127 ttcctttttctttctccattgtttttgaccaataagaagagagaaaaacaaggttgtca 37562069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 39359821 - 39359879
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    |||||||||||||||| |||||| |||||||||  |||||||||| |  ||||||||||    
T  39359821 ttcctttttctctctctattgtttttgaccaataagaagggagaaaagtaaggttgtca 39359879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 426186 - 426219
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  426186 ttcctttttctctctccattgtttttgaccaatg 426219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 23709061 - 23709094
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    |||||||||||||||| |||||||||||||||||    
T  23709061 ttcctttttctctctctattgttcttgaccaatg 23709094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 24946087 - 24946120
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  24946087 ttcctttttctctctccattgtttttgaccaatg 24946120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 32674218 - 32674117
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtac-caaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||| || |||||| || ||||||| ||||||| || || || ||||||  |||||||||||  ||||||||||  |||||||| | ||||    
T  32674218 ttcctttttctctttctattgtttttaaccaatgagaagggataacaacaaagttgtctcaaaggttgtactaaaatggttgtcaaaatatcactactct 32674119  T
Q  100 tt 101  Q
    ||    
T  32674118 tt 32674117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 37033087 - 37033054
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  37033087 ttcctttttctctctccattgtttttgaccaatg 37033054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 5359426 - 5359514
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    |||||||||||||||||||| |||||||||   ||| ||||| ||  || |||||| ||| |||||  ||||| | |||||||||||||    
T  5359426 ctttttctctctccattgtttttgaccaataaaaagagagaaaaaagagattgtcacaaaagttgtttcaaatagatgttcaaatatca 5359514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 98
Target Start/End: Original strand, 9314566 - 9314594
Alignment:
Q  70 accaaatggttgttcaaatatcattgctc 98  Q
    |||||||||||||||||||||||||||||    
T  9314566 accaaatggttgttcaaatatcattgctc 9314594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 31665976 - 31665908
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt 69  Q
    ||||||||||||||||| || || ||||||||||  ||| ||||| |||||| || | |||||||||||    
T  31665976 ttcctttttctctctcctttatttttgaccaatgaaaagagagaaaaagaagattataaaaaaggttgt 31665908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 35967392 - 35967360
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  35967392 ttcctttttctctctccattgtttttgaccaat 35967360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 34921 - 35024
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34921 ttcctttttctctctccattgtt-ttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttgtaccaaatggttgttcaaatatcattgctctt 35019  T
Q  101 ttaaa 105  Q
    |||||    
T  35020 ttaaa 35024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 30687141 - 30687236
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||| || | ||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  30687141 tttttctctctccattgtttttaaacaatgagaagggagaagaagaaggttgtcaaaaaatttgtaccaaatggttgttcaaatatcattgctctt 30687236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 4604614 - 4604711
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  4604614 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaagaaggttgtcaaacaggttgtaccaaatcgttgttcaaatatcattgctc 4604711  T

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Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 48872464 - 48872569
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| | ||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  48872464 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtatcaaatggttgttcaaatatcattgctctt 48872563  T
Q  101 ttaaaa 106  Q
     |||||    
T  48872564 ataaaa 48872569  T

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Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 27352715 - 27352817
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| |  ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  27352715 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaagaaaggttgtcgaataggttgtaccaaatggttgttcaaatatcattgctctt 27352814  T
Q  101 tta 103  Q
    |||    
T  27352815 tta 27352817  T

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Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 44730729 - 44730827
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||| ||||| || |||||||  ||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44730729 ttcctttttctctctcctttgtttttaaccaatgaaaaaagagaaaaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 44730827  T

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Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 51339686 - 51339590
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgct 97  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| | ||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  51339686 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttgtaccaaatagttgttcaaatatcattgct 51339590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 36930732 - 36930641
Alignment:
Q  11 tctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctttt 102  Q
    ||||||||||||| |||||||||   ||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36930732 tctctccattgtttttgaccaataaaaagagagaaaaagaaggttgtcaaaaaggttgtacaaaatggttgttcaaatatcattgctctttt 36930641  T

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Target: chr1; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 50528043 - 50527944
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| ||||||||||||||| || ||||| ||||||||||||||||||| |||||||||    
T  50528043 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaagaaggttgtcaaatagattgtagcaaatggttgttcaaatatgattgctctt 50527944  T

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Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 25061818 - 25061916
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| || |||||||  ||| ||||| ||||||||||||||| || ||||| ||||||||||||||||||||||||||||    
T  25061818 ttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaagaaggttgtcaaatagattgtatcaaatggttgttcaaatatcattgctct 25061916  T

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Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 43612068 - 43611971
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||||| |||| || ||||| ||||||||||||||||||| ||||||||||||||||    
T  43612068 ttcctttttctctctccattgtttttgaccaatgaaaagagagaagaggaagattatcaaataggttgtaccaaatggttggtcaaatatcattgctc 43611971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 40596040 - 40595942
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| || |   ||||||||||||||||| ||||||||||||||||||||||||||||    
T  40596040 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaaattattgtcaaaaaggttgtatcaaatggttgttcaaatatcattgctct 40595942  T

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Target: chr1; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 21255768 - 21255672
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||||||| |||||||||| |||| ||||| ||| ||||||||| ||| |||| || ||||||||||||||||||||||||||||    
T  21255768 ctttttctctctccattgtttttgaccaatgagaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttgttcaaatatcattgctct 21255672  T

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Target: chr1; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 25098774 - 25098683
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattg 95  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| | ||||||||||   ||||||||||||||||||||||||||||||||||    
T  25098774 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaggttgtc---aaggttgtaccaaatggttgttcaaatatcattg 25098683  T

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Target: chr1; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 49621450 - 49621546
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctcttt 101  Q
    ||||||||||||||||||| |||||||||   ||| ||||| | |||| |||||||| || ||||||||||||||||||||||||||||||||||||    
T  49621450 tttttctctctccattgtttttgaccaataaaaagagagaaaatgaagattgtcaaatagattgtaccaaatggttgttcaaatatcattgctcttt 49621546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 30530556 - 30530471
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatat 90  Q
    ||||||||||||||||||| ||||||||||  ||| ||||| | ||| ||||||||| ||||||||||||||||||||||||||||    
T  30530556 tttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaagttgtcaaataggttgtaccaaatggttgttcaaatat 30530471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 31244717 - 31244620
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcattgctcttt 101  Q
    ||||||||||||||||||| |||||||||| |||| ||||| || | |||||||  ||| |||||||| |||| ||||||||||||||||||||||||    
T  31244717 tttttctctctccattgtttttgaccaatgagaagagagaacaacatggttgtcccaaatgttgtaccaaaatagttgttcaaatatcattgctcttt 31244620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 11460879 - 11460978
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    |||||||||||||||||||| || |||||||||   |||  |||  ||||||||||||||||| |||||| ||||| ||||||||||||||||| |||||    
T  11460879 ttcctttttctctctccattatttttgaccaataaaaagaaagagaaagaaggttgtcaaaaaagttgtatcaaattgttgttcaaatatcattcctctt 11460978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 16658528 - 16658627
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaa----tggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||| |||||||||   ||  ||||| | ||||||||||||| |||||||||||||    |||||||||||||||||||||||||    
T  16658528 tttttctctctccattgtttttgaccaataaaaaaagagaaaaggaaggttgtcaaataggttgtaccaaataattggttgttcaaatatcattgctctt 16658627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 37947206 - 37947112
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcatt 94  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||| || |||||||||  ||| ||||| || |||| |||||||||||||||||    
T  37947206 ttcctttttctctctccattgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaacaaaatagttgttcaaatatcatt 37947112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 47059876 - 47059778
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| || ||| ||||||  || |||| || |||||||||||||||||||||||||||    
T  47059876 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaataagattgtcatgaaagttgttagcaaatggttgttcaaatatcattgctc 47059778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 43640972 - 43640875
Alignment:
Q  2 tcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctc 98  Q
    |||||||||||||||||||||| ||||||||||  ||| ||||| ||  |||||||||  || |||| || |||||||||||||||||||||||||||    
T  43640972 tcctttttctctctccattgtttttgaccaatgaaaagagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctc 43640875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 8577484 - 8577388
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||| |||||||||| |||  ||||| || |||||||||  ||| ||| |||| |||| |||||||||||||||||||||||    
T  8577484 tttttctctctccattgtttttgaccaatgagaatagagaacaacaaggttgtcccaaaagttataccaaaatagttgttcaaatatcattgctctt 8577388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 46903557 - 46903657
Alignment:
Q  3 cctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcattgctcttt 101  Q
    |||||||||||||| |||||| |||||||||| |||| ||||| || || ||||||  |||||||||||| ||||||||||| |||||||| | ||||||    
T  46903557 cctttttctctctctattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 46903656  T
Q  102 t 102  Q
    |    
T  46903657 t 46903657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 48325307 - 48325407
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||| ||| |||||||||   | |||| || |||||||||||| |||||||| ||||||    
T  48325307 ttcctttttctctctccattgtttttgaccaatgagaagagagaaaaaggaggttgtcattgaagttgttagcaaatggttgttaaaatatcactgctct 48325406  T
Q  100 t 100  Q
    |    
T  48325407 t 48325407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 16987535 - 16987630
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctc 98  Q
    |||||||||||||||||||| ||||||||||  ||| ||||| ||| ||||||||| | |  ||| || |||||||||||||||||||||||||||    
T  16987535 ctttttctctctccattgtttttgaccaatgaaaagagagaaaaaggaggttgtcatagaaattgttagcaaatggttgttcaaatatcattgctc 16987630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 40605383 - 40605308
Alignment:
Q  25 ttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    |||||||||| |||| ||||| ||||||||||||| ||| ||||| | ||||||||||||||||||||||||||||    
T  40605383 ttgaccaatgagaagagagaaaaagaaggttgtcataaaagttgttagcaaatggttgttcaaatatcattgctct 40605308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 38019484 - 38019389
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctcttt 101  Q
    |||||||||||||||| || |||||||||   ||  ||||| |||||||||||||  ||  ||||||||||||||||||||||||||| ||||||||    
T  38019484 tttttctctctccattatttttgaccaataacaaaagagaaaaagaaggttgtcatcaaa-ttgtaccaaatggttgttcaaatatcactgctcttt 38019389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 23554836 - 23554935
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| || |||||||  | | ||||| ||  |||||||||  || ||||| | ||||||||||||||||||||||||||||    
T  23554836 ttcctttttctctctccattgtttttaaccaatgaaaggagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctct 23554935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 32821727 - 32821814
Alignment:
Q  8 ttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattg 95  Q
    |||||||||||||||| || |||||||  ||| ||||| | ||| ||||||||| | ||| || ||||||||||||||||||||||||    
T  32821727 ttctctctccattgttttttaccaatgaaaagagagaaaatgaatgttgtcaaataagttttatcaaatggttgttcaaatatcattg 32821814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 51172289 - 51172194
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||| |||||||||    |  ||||| |  ||| |||||||| || |||||||||||| ||||||||||||||||||||||    
T  51172289 tttttctctctccattgtttttgaccaataaacaaagagaaaagaaagattgtcaaatagattgtaccaaatgattgttcaaatatcattgctctt 51172194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 25239213 - 25239123
Alignment:
Q  11 tctctccattgttcttgaccaatgggaagggagaagaagaag-gttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||| |||||||||  |||| ||||| || ||  ||| ||| |||||||||||| ||| |||||||||||||||||||||||    
T  25239213 tctctccattgtttttgaccaataagaagagagaaaaaaaaaagttatcataaaggttgtacccaatagttgttcaaatatcattgctctt 25239123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 41885809 - 41885875
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgta 70  Q
    |||||||||||||||||||| |||||||||  |||  ||||| ||||||||||||||||| ||||||    
T  41885809 ctttttctctctccattgtttttgaccaatcagaatagagaaaaagaaggttgtcaaaaaagttgta 41885875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 22389511 - 22389411
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||| |||||||| || ||||||||||  ||| ||||| ||  | ||||||| ||| |||| | ||||||||||||||||||||||| |||||    
T  22389511 ttcctttttctttctccattatttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttg-atcaaatggttgttcaaatatcattactctt 22389413  T
Q  101 tt 102  Q
    ||    
T  22389412 tt 22389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 32966355 - 32966456
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctctttt 102  Q
    |||||||||||||||||||| |||||||||   ||| ||||| ||  ||||||||| ||| |||| ||  |||| ||||||||||||||||||||| |||    
T  32966355 ctttttctctctccattgtttttgaccaataaaaagagagaaaaatgaggttgtcacaaaagttgttagtaaatagttgttcaaatatcattgctcattt 32966454  T
Q  103 aa 104  Q
    ||    
T  32966455 aa 32966456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 13813643 - 13813743
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || ||||||||||  || |||| ||   ||||| ||| ||||||||||||||||    
T  13813643 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttatggaatggatgtacaaatatcattgctct 13813742  T
Q  100 t 100  Q
    |    
T  13813743 t 13813743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 39010899 - 39010987
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaata 89  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| ||  | ||||||| ||| |||||  || |||||||||||||||    
T  39010899 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaata 39010987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 40610314 - 40610405
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggaga-agaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||||||| ||||||||||  ||| |||| | ||||| ||||||| ||| |||||  ||||||| |||||||||||||    
T  40610314 ttcctttttctctctccattgtttttgaccaatgaaaagagagagaaaagaa-gttgtcacaaaagttgtctcaaatggatgttcaaatatca 40610405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 59 - 95
Target Start/End: Original strand, 51571661 - 51571697
Alignment:
Q  59 aaaaaggttgtaccaaatggttgttcaaatatcattg 95  Q
    |||||||||||||||||||||||||||||||||||||    
T  51571661 aaaaaggttgtaccaaatggttgttcaaatatcattg 51571697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 48336434 - 48336347
Alignment:
Q  8 ttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcatt 94  Q
    |||||||||||||||  |||||||||  |||||||||| |  ||||||||| |||| ||||| || |||| |||||||||||||||||    
T  48336434 ttctctctccattgtgtttgaccaataagaagggagaacatcaaggttgtccaaaaagttgtaacaaaatagttgttcaaatatcatt 48336347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 11897262 - 11897359
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaatatcattgctctt 100  Q
    |||||| ||||||||||||  |||||||||  |||||||||| |  |||||||||| |||  ||||| |||| | ||||||||||||||||| |||||    
T  11897262 ctttttttctctccattgtggttgaccaataagaagggagaatatcaaggttgtcacaaaaattgtaacaaaagagttgttcaaatatcattactctt 11897359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 5043186 - 5043226
Alignment:
Q  54 ttgtcaaaaaggttgtaccaaatggttgttcaaatatcatt 94  Q
    |||||||| | ||||||||||||||||||||||||||||||    
T  5043186 ttgtcaaataagttgtaccaaatggttgttcaaatatcatt 5043226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 28457329 - 28457241
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatca 92  Q
    ||||||||||| ||||||| ||||||||||  ||  ||||| || || ||||||  |||||||||||| ||||||||||| ||||||||    
T  28457329 tttttctctcttcattgtttttgaccaatgaaaatagagaacaataaagttgtctcaaaggttgtaccaaaatggttgttaaaatatca 28457241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 33100858 - 33100806
Alignment:
Q  48 agaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    |||| ||||||||||| ||||||  |||||||||||||||||||||| |||||    
T  33100858 agaaagttgtcaaaaaagttgtaaaaaatggttgttcaaatatcatttctctt 33100806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 29254048 - 29253953
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||| | ||||| |||| ||||| |||| ||||| ||| |||||||||   | ||||| | ||||| ||||||||||||||||||||||    
T  29254048 tttttctctctacgttgtttttgatcaatgagaagagagaaaaaggaggttgtcattgaagttgttagcaaatagttgttcaaatatcattgctct 29253953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 30530385 - 30530294
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||| ||||||||||| | |||||||  |||| ||||| | ||| |||||||  || ||||| |||||||||||| || ||||||    
T  30530385 ttcctttttctgtctccattgttttggaccaataagaagagagaaaatgaaagttgtcatcaaagttgtcccaaatggttgtacatatatca 30530294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 30631831 - 30631740
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| ||  | |||||   ||| |||||   ||||||||||||||||||||    
T  30631831 ttcctttttctctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatca 30631740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 31290194 - 31290103
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||||||| || |||||||  ||  ||||| ||  | ||||||| ||| |||||   ||||||||||||||||||||    
T  31290194 ttcctttttctctctccattgtttttaaccaatgaaaaaagagaaaaaataagttgtcacaaaagttgtgtgaaatggttgttcaaatatca 31290103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 42843327 - 42843272
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    |||||||||||||||||||| |||||||||  |||| ||||| || ||||||||||    
T  42843327 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtca 42843272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 2827696 - 2827622
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaa 75  Q
    |||||||||||||||| |||||| |||||||||  |||| ||||| || ||  |||||  |||||||||||||||    
T  2827696 ttcctttttctctctctattgtttttgaccaataagaagagagaacaacaaaattgtctcaaaggttgtaccaaa 2827622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 7203830 - 7203772
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    |||||||||||||||| |||||| ||||||||| | ||| ||||| || ||||||||||    
T  7203830 ttcctttttctctctctattgtttttgaccaatagaaagagagaaaaacaaggttgtca 7203772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 11121566 - 11121663
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaa-tggttgttcaaatatcattgctc 98  Q
    ||||||||||| |||| |||||| || ||||||| |||| || || || ||| |||||| ||| ||| ||||||| | |||||||||||||||||||||    
T  11121566 ttcctttttctttctctattgtt-ttaaccaatgagaagagacaacaacaagattgtcacaaaagttataccaaaatagttgttcaaatatcattgctc 11121663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25995545 - 25995603
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| |||||||||   ||| ||||| || ||||||||||    
T  25995545 ttcctttttctctctccattgtttttgaccaataaaaagagagaaaaataaggttgtca 25995603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 26501384 - 26501438
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||| |||||||||  |||| ||||| || ||||||||||    
T  26501384 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtca 26501438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 29362678 - 29362620
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || || |||||||    
T  29362678 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtca 29362620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 36669356 - 36669298
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    |||||||||||||||||||| || |||||||||  |||| ||||| || ||||||||||    
T  36669356 ttcctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgtca 36669298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 42299169 - 42299075
Alignment:
Q  6 ttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaag-gttgtaccaaatggttgttcaaatatcattgctct 99  Q
    |||| ||||| |||| || |||||||||   ||| ||||| |||||| ||||||||||  ||||||| ||||  |||||||||||||||||||||    
T  42299169 ttttttctcttcattatttttgaccaataaaaagagagaaaaagaagattgtcaaaaaatgttgtactaaataattgttcaaatatcattgctct 42299075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 51168750 - 51168660
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcatt 94  Q
    ||||||||||||||||||| || ||||||  |||  ||||| || ||  |||||| ||| ||||| | |||||||||||||||||||||||    
T  51168750 tttttctctctccattgtttttaaccaataagaaaagagaaaaaaaaaattgtcataaaagttgttagcaaatggttgttcaaatatcatt 51168660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 52669762 - 52669672
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcatt 94  Q
    |||||||||||| |||||| |||||||||  |||| |||||   |||||||| || |||  |||| ||||||||||||| |||||||||||    
T  52669762 tttttctctctcgattgtttttgaccaatatgaagagagaaagggaaggttgacacaaaatttgtcaccaaatggttgtacaaatatcatt 52669672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 8350217 - 8350270
Alignment:
Q  48 agaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctcttt 101  Q
    |||| ||||||| ||| ||||||  |||||||||||||||||||||| ||||||    
T  8350217 agaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttctcttt 8350270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 28253100 - 28253133
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  28253100 ttcctttttctctctccattgtttttgaccaatg 28253133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 31436905 - 31436938
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  31436905 ttcctttttctctctccattgtttttgaccaatg 31436938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 33422205 - 33422124
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgt 82  Q
    |||||||||||||||| |||||| | |||||||| |||| ||||| |  || |||||||| || |||||  |||||||||||    
T  33422205 ttcctttttctctctctattgttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcacaaatggttgt 33422124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 35846305 - 35846272
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  35846305 ttcctttttctctctccattgtttttgaccaatg 35846272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 44112539 - 44112620
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgt 82  Q
    |||||||||||||||| |||||| | |||||||| |||| ||||| |  || |||||||| || |||||  |||||||||||    
T  44112539 ttcctttttctctctctattgttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcacaaatggttgt 44112620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 45740530 - 45740497
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  45740530 ttcctttttctctctccattgtttttgaccaatg 45740497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 50659178 - 50659145
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  50659178 ttcctttttctctctccattgtttttgaccaatg 50659145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 2257680 - 2257648
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  2257680 ttcctttttctctctccattgtttttgaccaat 2257648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 2571680 - 2571632
Alignment:
Q  53 gttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctcttt 101  Q
    ||||||| ||| ||||||  |||||||||||||||||||||| ||||||    
T  2571680 gttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttctcttt 2571632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 4511759 - 4511663
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctcttt 101  Q
    |||||||||||| |||||| | |||||||| |||| || || | ||| |||||||   | ||||| |||||||||||| || |||||||| ||||||    
T  4511759 tttttctctctctattgttttggaccaatgagaagagaaaaaatgaaagttgtcatctaagttgtcccaaatggttgtacatatatcattactcttt 4511663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 10385499 - 10385531
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  10385499 ttcctttttctctctccattgtttttgaccaat 10385531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 11097870 - 11097838
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  11097870 ttcctttttctctctccattgtttttgaccaat 11097838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 43196075 - 43196043
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  43196075 ttcctttttctctctccattgtttttgaccaat 43196043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 48962071 - 48962163
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaatatca 92  Q
    |||||||||||||||| |||||| |||||||||  |||| ||  | || |||||||||  |||  |||||||||| | |||||||||||||||    
T  48962071 ttcctttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatca 48962163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 46567017 - 46567114
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctcttt 101  Q
    |||||||||||||||||||| ||||||||||  ||| ||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  46567017 ctttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtaccaaatggttgttcaaatatcattgctcttt 46567114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 28676130 - 28676043
Alignment:
Q  11 tctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||| ||||||||||  ||| ||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  28676130 tctctccattgtttttgaccaatgaaaagagagaaaaagaaggttgtcaaaaaggttgtacaaaatggttgtttaaatatcattgctc 28676043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 18874910 - 18874809
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||| ||| ||||||||| ||| |||| || |||||| |||||||||||||||||||||    
T  18874910 ttcctttttctctctccattgtttttgaccaatgagaagagagaaaaaggaggttgtcataaaagttgttagcaaatgattgttcaaatatcattgctct 18874811  T
Q  100 tt 101  Q
    ||    
T  18874810 tt 18874809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 12638915 - 12639010
Alignment:
Q  7 tttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctttt 102  Q
    ||||||||||||||||| ||||||||||  ||| ||||| | ||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||    
T  12638915 tttctctctccattgtttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttgtaacaaatagttgttcaaatatcatttctctttt 12639010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 40847458 - 40847549
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||||||| || |||||||  |||  |||| |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  40847458 tttttctctctccattgttttttaccaatgaaaag--agaaaaagaaggttgtcaaaaaggttgtgtcaaatggttgttcaaatatcattgctc 40847549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 43982982 - 43983080
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||| ||  || |||||  ||| |||||||| ||||||||||||||||||||||||||    
T  43982982 ttcctttttctctctccattgtttttgaccaatgagaagagagaacaactagattgtcctaaaagttgtaccaaaatggttgttcaaatatcattgctc 43983080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 33438134 - 33438227
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    |||||||||||| |||||| |||||||||   ||| ||||| | ||||||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  33438134 tttttctctctctattgtttttgaccaataaaaagagagaaaatgaaggttatcaaaaaagttgtaccaaatggttgtttaaatatcattgctc 33438227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 37977200 - 37977298
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||||||| || || || ||||  ||| |||||  | ||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  37977200 ttcctttttctctctccattattttttactaatgaaaagagagaaagaaaaaattgtcaaaaatgttgtaccaaatggttgttcaaatatcattgctct 37977298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 55510948 - 55511043
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||| ||||||||| ||||||| ||  ||  ||||| | ||| ||| ||||| | ||||||||||||||||||||||||||||||||||||    
T  55510948 tttttctctttccattgtttttgaccattgaaaatagagaaaaggaaagttttcaaataagttgtaccaaatggttgttcaaatatcattgctctt 55511043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 7795090 - 7795182
Alignment:
Q  8 ttctctctccattgttcttgaccaatgggaagggagaagaagaag--gttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||| |||| |||||||||  ||||  ||||||| ||   ||||||| |||||||||| |||||||||||||||||||||||||||    
T  7795090 ttctctctccaatgtttttgaccaataagaagaaagaagaaaaaaaagttgtcataaaggttgtatcaaatggttgttcaaatatcattgctc 7795182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 46799845 - 46799940
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaa-tggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||| |||||||||| |||  ||||| || |||||||||  |||  |||||||||| || ||||||||||||||||||||||    
T  46799845 tttttctctctccattgtt-ttgaccaatgagaatagagaacaacaaggttgtcccaaaaattgtaccaaaatgattgttcaaatatcattgctctt 46799940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 4896486 - 4896395
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| ||  ||||||||| ||| |||||  ||||| | |||||||||||||    
T  4896486 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 4896395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 31658007 - 31658094
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatc 91  Q
    |||||||||||||||||||| ||||||||||  ||| ||||| ||  | ||||||| ||| | |||| ||||||||||||||||||||    
T  31658007 ctttttctctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtcacaaaagctgtatcaaatggttgttcaaatatc 31658094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 51389404 - 51389499
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||||||| || || ||||  ||| ||||| ||  | ||||||| ||| |||||| ||||||||||||||||||||| ||||||    
T  51389404 ctttttctctctccattgttttttactaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatatcactgctct 51389499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 54801081 - 54801180
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaa-gaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||||||| || |||||||||   ||| || || || ||||||||||||| |  |||||||||||  |||||||||||||||||||||    
T  54801081 ttcctttttctctctccattatttttgaccaataaaaagagaaaaaaatgaaggttgtcaaataaattgtaccaaataattgttcaaatatcattgctct 54801180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 3223074 - 3223132
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| |||||||||||||    
T  3223074 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaagaaggttgtca 3223132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 11997784 - 11997834
Alignment:
Q  50 aaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    |||| ||||||| |||||||||||||||||||||||||||||||| |||||    
T  11997784 aaggatgtcaaataggttgtaccaaatggttgttcaaatatcattactctt 11997834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 34027981 - 34028039
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||| ||| |||||||||    
T  34027981 ttcctttttctctctccattgtttttgaccaatgagaagagagaaaaaggaggttgtca 34028039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 42510907 - 42510809
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctctttt 102  Q
    ||||||||||||||||||| ||||| ||||  ||  ||||| ||| |||| ||||  || ||||| | |||||||||||||||||||||||||||||||    
T  42510907 tttttctctctccattgtttttgacaaatgaaaatagagaaaaaggaggtcgtcatcaaagttgttagcaaatggttgttcaaatatcattgctctttt 42510809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 45678348 - 45678442
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcatt 94  Q
    ||||||||||||||||||||||| |||||||||   ||| ||||| || ||||||||   ||| |||||||| |||| |||||||||||||||||    
T  45678348 ttcctttttctctctccattgtttttgaccaataaaaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcatt 45678442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 4878052 - 4878153
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgta-ccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||| ||||||||| ||||||||||  ||| ||| | || |||||||||  ||| |||||| | |||  ||||||||||||||||||||||    
T  4878052 ttcctttttctctttccattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattgctct 4878151  T
Q  100 tt 101  Q
    ||    
T  4878152 tt 4878153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 5208313 - 5208212
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || ||||||||||  || ||||| |   ||||| ||| ||||||||||||||||    
T  5208313 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctct 5208214  T
Q  100 tt 101  Q
    ||    
T  5208213 tt 5208212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7037470 - 7037413
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtc 58  Q
    ||||||||||||||||||||||| |||||||||  |||||||||| || |||||||||    
T  7037470 ttcctttttctctctccattgtttttgaccaataagaagggagaaaaacaaggttgtc 7037413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 16508959 - 16508870
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcatt 94  Q
    |||||||||||| ||| || ||||||||||  ||| ||||| | ||||||||||||  ||||||||||||||  ||||||||||| ||||    
T  16508959 tttttctctctctattatttttgaccaatgaaaagagagaaaatgaaggttgtcaagtaggttgtaccaaattattgttcaaatagcatt 16508870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 22071591 - 22071684
Alignment:
Q  9 tctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctttt 102  Q
    |||||||| |||||| || ||||||  |||| ||||| ||||| ||||||||| | |||||||||||||||||| | ||||||| | |||||||    
T  22071591 tctctctctattgtttttaaccaataagaagagagaaaaagaaagttgtcaaacaagttgtaccaaatggttgtactaatatcactcctctttt 22071684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 23094465 - 23094557
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    |||||||||||||||| || |||||||||   ||  ||||| |||||||||| ||  ||  |||||||||||||||||||||||||||||||||    
T  23094465 tttttctctctccattattattgaccaataacaaaagagaaaaagaaggttgccatcaaa-ttgtaccaaatggttgttcaaatatcattgctc 23094557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 98
Target Start/End: Complemental strand, 41010097 - 41010060
Alignment:
Q  61 aaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41010097 aaaggttgtaccaaatggttgttcaaatatcattgctc 41010060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 47998679 - 47998779
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||||||| ||||||||||  |||  |||| || || ||| ||| ||| |||||| |||||| |||||||||||||| | |||||    
T  47998679 ttcctttttctctctccattgtttttgaccaatgaaaagaaagaa-aaaaaagttatcacaaaagttgtatcaaatgattgttcaaatatcactactctt 47998777  T
Q  101 tt 102  Q
    ||    
T  47998778 tt 47998779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 1987697 - 1987625
Alignment:
Q  3 cctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaa 75  Q
    ||||||||||||||||||||| ||||||||||  ||| ||||| || || ||||||  |||||||||||||||    
T  1987697 cctttttctctctccattgtttttgaccaatgaaaagagagaacaacaaagttgtctcaaaggttgtaccaaa 1987625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 31275234 - 31275322
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||| |||||||||||||| ||||||||||  ||| ||||| ||  |  |||||| ||| |||||| |||||||||||||||||||||    
T  31275234 cttttcctctctccattgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatcaaatggttgttcaaatatca 31275322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 42854026 - 42854126
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||| |||||| |||||| ||| |||| ||||| ||  | ||||||| | | ||||| | || |||||||||||||||||||||||||    
T  42854026 ttcctttttctctctctattgtttttgaccgatgagaagagagaaaaatgaagttgtcatagaagttgttagcacatggttgttcaaatatcattgctct 42854125  T
Q  100 t 100  Q
    |    
T  42854126 t 42854126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 44368188 - 44368088
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| ||||| |||  |||| ||||| || ||||||||||  || ||||| |  |||||| ||| ||||||||||||||||    
T  44368188 ttcctttttctctctccattgtttttgacaaataagaagagagaaaaataaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctct 44368089  T
Q  100 t 100  Q
    |    
T  44368088 t 44368088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 51377279 - 51377179
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || ||||||||||  || ||||| |   ||||| ||| ||||||||||||||||    
T  51377279 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcaaggaatggatgtacaaatatcattgctct 51377180  T
Q  100 t 100  Q
    |    
T  51377179 t 51377179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 5234453 - 5234366
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||| ||||||||||||| |||||||||   ||| ||||| || ||  |||||| ||| |||||| |||||||||||||||||||||    
T  5234453 tttttttctctccattgtttttgaccaataaaaagagagaaaaaaaaaattgtcacaaaagttgtatcaaatggttgttcaaatatca 5234366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 26440748 - 26440847
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||||||| |||||||||   ||   |||| |  |||||||||||| || |||||| ||||| || |||||||||||||| ||||    
T  26440748 ttcctttttctctctccattgtttttgaccaataaaaaaaaagaaaataaaggttgtcaaatagattgtacaaaatgattcttcaaatatcattgatctt 26440847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 98
Target Start/End: Original strand, 32621764 - 32621799
Alignment:
Q  63 aggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||||||||||||||||||||||||    
T  32621764 aggttgtaccaaatggttgttcaaatatcattgctc 32621799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 97
Target Start/End: Original strand, 48783940 - 48783975
Alignment:
Q  62 aaggttgtaccaaatggttgttcaaatatcattgct 97  Q
    ||||||||||||||||||||||||||||||||||||    
T  48783940 aaggttgtaccaaatggttgttcaaatatcattgct 48783975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23220420 - 23220522
Alignment:
Q  1 ttcctttttctctctccattgttcttgacc-aatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||| ||||||| |||||| ||||  ||  ||||| ||  |||||||||  || ||||| | |||||||||||||||||||||||||||    
T  23220420 ttcctttttctctcttcattgtttttgacccaatgaaaacagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctc 23220519  T
Q  99 ttt 101  Q
    |||    
T  23220520 ttt 23220522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 24088526 - 24088432
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcatt 94  Q
    ||||||||||||| || |||||| |||||||||  |||| |||||  |||||||||||| ||  ||||| |||||||||||||  ||||||||||    
T  24088526 ttcctttttctctttctattgttgttgaccaatacgaagagagaaagagaaggttgtcacaagagttgtcaccaaatggttgtaaaaatatcatt 24088432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 27001395 - 27001337
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || ||||||||||    
T  27001395 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtca 27001337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 23837082 - 23836989
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||| ||||||||||||| ||||| |||   ||| ||||| |||||  || ||||| | ||||||||||||| ||||| ||||||||||||||    
T  23837082 tttttttctctccattgtttttgactaattaaaagagagaaaaagaaaattatcaaataagttgtaccaaatgattgtttaaatatcattgctc 23836989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 33860528 - 33860435
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgct 97  Q
    ||||| ||||||||||||| |||||||||   ||| ||||| ||  |||||||||  || ||||| | ||||||||||||||||||||||||||    
T  33860528 tttttttctctccattgtttttgaccaataataagagagaaaaatgaggttgtcatcaaagttgttagcaaatggttgttcaaatatcattgct 33860435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 42915205 - 42915104
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||| || |||||| || |||||||  ||| ||||| ||  | ||||||| ||| |||||| ||||| ||||||||||||||| | |||||    
T  42915205 ttcctttttctctttctattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactctt 42915106  T
Q  101 tt 102  Q
    ||    
T  42915105 tt 42915104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 1580265 - 1580177
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca-aaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||| ||  ||||||  ||| ||||| || || ||||||| |||| ||||||  ||||||||||||||||||||    
T  1580265 tttttctctctccattgtttttatccaatgaaaagagagaaaaaaaaagttgtcacaaaaagttgtatgaaatggttgttcaaatatca 1580177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 3475953 - 3476053
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    |||||||| ||||||| |||||| ||||||||||  |||  |||| || |||||||||| ||| ||||| | |||||||||||  |||||||||| ||||    
T  3475953 ttccttttactctctctattgtttttgaccaatgaaaagaaagaaaaataaggttgtcacaaatgttgtcatcaaatggttgtcaaaatatcattactct 3476052  T
Q  100 t 100  Q
    |    
T  3476053 t 3476053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 6126942 - 6127038
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctctt 100  Q
    |||||||||||| ||||||||||||||||  |||  ||||| | | ||||||||| ||| ||||| |  ||| |||||||||||||||||| |||||    
T  6126942 tttttctctctctattgttcttgaccaataagaaaagagaaaaggtaggttgtcacaaaagttgtcattaaaaggttgttcaaatatcattactctt 6127038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 26442370 - 26442282
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatca 92  Q
    |||||||||||| ||| || ||||| || |||||||||||| || || ||||||  |||||||||||| |||| |||||| ||||||||    
T  26442370 tttttctctctctattttttttgacgaacgggaagggagaacaacaaagttgtctcaaaggttgtaccaaaattgttgttaaaatatca 26442282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 34259918 - 34260010
Alignment:
Q  9 tctctctc-cattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    |||||||| ||| ||| |||||||||  |||| ||||| |||||| |||||| ||| ||||| ||||||||||||| ||||||||||| ||||    
T  34259918 tctctctctcatagtttttgaccaataagaagagagaaaaagaagtttgtcacaaaagttgtcaccaaatggttgtacaaatatcattactct 34260010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 48650242 - 48650186
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgt 57  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || ||||||||    
T  48650242 ttcctttttctctctccattgtttttgaccaataagaagagagaacaacaaggttgt 48650186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 3286903 - 3286994
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||||||| || |||||||  || |||||| ||  |  |||||| ||| |||||   ||||||||||||||||||||    
T  3286903 ttcctttttctctctccattgtttttaaccaatgaaaaaggagaaaaaataaattgtcacaaaagttgtgtgaaatggttgttcaaatatca 3286994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 8026750 - 8026651
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || || |||||||  || ||||| |   ||||| ||| ||||||||||||||||    
T  8026750 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcatggaatggatgtacaaatatcattgctct 8026651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 9827968 - 9827897
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaa 75  Q
    |||||||||||||||||||| |||||||||| |||| || || || || ||||||  ||||||| |||||||    
T  9827968 ctttttctctctccattgtttttgaccaatgagaagagataacaacaaagttgtctcaaaggttataccaaa 9827897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 15596481 - 15596572
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||||||| | ||||||||  ||  ||||| ||  | ||||||| ||| |||||   ||||||||||||||||||||    
T  15596481 ttcctttttctctctccattgttttggaccaatgaaaaatgagaaaaaagaagttgtcacaaaagttgtttaaaatggttgttcaaatatca 15596572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 97
Target Start/End: Complemental strand, 24209724 - 24209689
Alignment:
Q  62 aaggttgtaccaaatggttgttcaaatatcattgct 97  Q
    |||||||||||||||||||||| |||||||||||||    
T  24209724 aaggttgtaccaaatggttgtttaaatatcattgct 24209689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 47105999 - 47106054
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    |||||||||||||||||||| |||||||||  |||| ||||| || ||||||||||    
T  47105999 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtca 47106054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 8455988 - 8456046
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    |||||||||||||||| |||||| |||||||||   ||| ||||| |||||||||||||    
T  8455988 ttcctttttctctctctattgtttttgaccaataaaaagagagaaaaagaaggttgtca 8456046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 15515869 - 15515927
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| |||||||||   ||| ||||| || ||||||||||    
T  15515869 ttcctttttctctctccattgtttttgaccaataaaaagtgagaaaaacaaggttgtca 15515927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 29863643 - 29863737
Alignment:
Q  8 ttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaa-tggttgttcaaatatcattgctcttt 101  Q
    ||||||||||||| || || ||||||  |||||||||  || || ||||||  ||| ||||||||||| |  |||||||||||||||||||||||    
T  29863643 ttctctctccattatttttaaccaataagaagggagagcaacaatgttgtctcaaaagttgtaccaaaataattgttcaaatatcattgctcttt 29863737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 31221498 - 31221556
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || ||| ||||||    
T  31221498 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtca 31221556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 33776979 - 33777073
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcatt 94  Q
    ||||||||||||||| ||||||| |||||||||   ||| ||||| || |||||| ||  |||  ||||||| |||| |||||||||||||||||    
T  33776979 ttcctttttctctcttcattgtttttgaccaataaaaagagagaacaacaaggttatcccaaaaattgtaccaaaatagttgttcaaatatcatt 33777073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 41495098 - 41495156
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || || |||||||    
T  41495098 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtca 41495156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 44495972 - 44495878
Alignment:
Q  11 tctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctcttttaa 104  Q
    ||||||||| ||| |||||||||  |||| || || ||| || |||||| | | ||||| | ||||||||||||||||||||||||||| |||||    
T  44495972 tctctccatcgtttttgaccaataagaagagaaaaaaaggagattgtcatagaagttgttagcaaatggttgttcaaatatcattgctcatttaa 44495878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 9162151 - 9162184
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  9162151 ttcctttttctctctccattgtttttgaccaatg 9162184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 102
Target Start/End: Original strand, 14443357 - 14443386
Alignment:
Q  73 aaatggttgttcaaatatcattgctctttt 102  Q
    ||||||||||||||||||||||||||||||    
T  14443357 aaatggttgttcaaatatcattgctctttt 14443386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 29577418 - 29577365
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtc 58  Q
    ||||||||||||||||||| ||||||||||  ||| ||||| || |||||||||    
T  29577418 tttttctctctccattgtttttgaccaatgaaaagagagaacaacaaggttgtc 29577365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 31318833 - 31318906
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaa 74  Q
    |||||||||| ||||| |||||| || ||||||| |||| |||||||| ||  |||||  ||||||||||||||    
T  31318833 ttcctttttcactctctattgtttttaaccaatgagaagagagaagaataaaattgtcttaaaggttgtaccaa 31318906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 38952774 - 38952807
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  38952774 ttcctttttctctctccattgtttttgaccaatg 38952807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 43175034 - 43174973
Alignment:
Q  48 agaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctcttttaaaatag 109  Q
    |||| ||| ||| ||| ||||||  |||||||||||||||||||||| ||||||||| ||||    
T  43175034 agaaagttatcacaaaagttgtaaaaaatggttgttcaaatatcatttctcttttaagatag 43174973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 46309106 - 46309017
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatca 92  Q
    ||||||||||||| |||||| ||||||||||  ||| |||||  | || ||||||  |||||||||||| ||||||||||  ||||||||    
T  46309106 ctttttctctctctattgtttttgaccaatgaaaagagagaactacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatca 46309017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 46794487 - 46794454
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  46794487 ttcctttttctctctccattgtttttgaccaatg 46794454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 50291367 - 50291456
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaata 89  Q
    |||||||||||||||| |||||| |||||||||  |||| ||  | || |||||||||  ||| ||||||||||| | ||||||||||||    
T  50291367 ttcctttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaata 50291456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 55609186 - 55609239
Alignment:
Q  48 agaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctcttt 101  Q
    |||| ||||||| ||| ||||||| |||||||||| ||||||||||| ||||||    
T  55609186 agaaagttgtcacaaaagttgtacaaaatggttgtacaaatatcatttctcttt 55609239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 4550419 - 4550451
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  4550419 ttcctttttctctctccattgtttttgaccaat 4550451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 17475373 - 17475313
Alignment:
Q  48 agaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctcttttaaaat 107  Q
    |||| ||||||||||| ||| | ||||||||  ||||||||||||||| ||||||||||||    
T  17475373 agaaagttgtcaaaaaagttatcaccaaatgaatgttcaaatatcatttctcttttaaaat 17475313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 22257182 - 22257091
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca-aaaaggttgtaccaaatggttgttcaaatatca 92  Q
    |||||||||||||||| |||||| || |||||||  ||| ||| |||| || |||||||  ||| ||||||  ||||||||||||||||||||    
T  22257182 ttcctttttctctctctattgtttttaaccaatgaaaagagag-agaaaaaagttgtcaccaaaagttgtatgaaatggttgttcaaatatca 22257091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 23369353 - 23369405
Alignment:
Q  48 agaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    |||| ||||||| ||| ||||||  |||||||||||||||||||||| |||||    
T  23369353 agaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttctctt 23369405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24235405 - 24235437
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  24235405 ttcctttttctctctccattgtttttgaccaat 24235437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 36364771 - 36364672
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaaga-aggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctc 98  Q
    |||||||||||| ||| |||||| |||||||||  |||| ||||| |||| ||| ||||| ||| ||||| | |||| |||||||||||||||||| |||    
T  36364771 ttcctttttctccctctattgtttttgaccaataagaagagagaa-aagataggctgtcacaaaagttgtcatcaaaaggttgttcaaatatcattactc 36364673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 39844244 - 39844212
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  39844244 ttcctttttctctctccattgtttttgaccaat 39844212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 100
Target Start/End: Complemental strand, 44272726 - 44272698
Alignment:
Q  72 caaatggttgttcaaatatcattgctctt 100  Q
    |||||||||||||||||||||||||||||    
T  44272726 caaatggttgttcaaatatcattgctctt 44272698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 44539379 - 44539411
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  44539379 ttcctttttctctctccattgtttttgaccaat 44539411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 46791977 - 46791885
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaatatca 92  Q
    |||||||||||||||| |||||| |||| ||||| | || ||||| ||  ||||||||  ||| |||||| |||| | |||||||||||||||    
T  46791977 ttcctttttctctctctattgtttttgatcaatgagtagagagaacaatgaggttgtctcaaaagttgtatcaaaagagttgttcaaatatca 46791885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 48148456 - 48148552
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||| || || | |||||  ||| ||||| ||  ||||| ||| ||| ||||| | |||||||||||||||||| |||||||||    
T  48148456 ctttttctctctccattattttttatcaatgaaaagagagaaaaatgaggttatcataaaagttgttagcaaatggttgttcaaataccattgctct 48148552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 56025341 - 56025373
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  56025341 ttcctttttctctctccattgtttttgaccaat 56025373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 6e-31; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 21805769 - 21805673
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||| |||| | ||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  21805769 ctttttctctctctattgcttttgaccaatgggaagagagaataagaaggttgtcaaaaagattgtaccaaatggttgttaaaatatcattgctctt 21805673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 5167728 - 5167628
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| | ||||||||||||  ||||| |||||||||||||||||||||||||||| |||    
T  5167728 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaatgaaggttgtcaagtaggttataccaaatggttgttcaaatatcattgcactt 5167629  T
Q  101 t 101  Q
    |    
T  5167628 t 5167628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 19668173 - 19668072
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||| ||||||||| ||||||||||  ||| ||||| | ||||||| ||||| |||||||| ||||||||||||||||||||||||| |||    
T  19668173 ttcctttttctctatccattgtttttgaccaatgaaaagagagaaaaggaaggttatcaaataggttgtatcaaatggttgttcaaatatcattgccctt 19668074  T
Q  101 tt 102  Q
    ||    
T  19668073 tt 19668072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 40951278 - 40951375
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctcttt 101  Q
    |||||||||||||||||||| || |||||||  ||| ||||| | ||||||||||||| |||||||||| |||||||||||| |||||||||||||||    
T  40951278 ctttttctctctccattgttttttaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtacctaatggttgttcatatatcattgctcttt 40951375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 30856892 - 30856986
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattg 95  Q
    ||||||||||||| ||||||||| ||||||||||  ||| ||||| ||||||||||||||| |  |||||||||||||||||||| |||||||||    
T  30856892 ttcctttttctctatccattgtttttgaccaatgaaaagagagaaaaagaaggttgtcaaataaattgtaccaaatggttgttcatatatcattg 30856986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 37631350 - 37631255
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctc 98  Q
    |||||||||||||||||||| |||||||||| |||| ||||| ||  ||||||||| ||| |||| || |||||||||||||||||||||||||||    
T  37631350 ctttttctctctccattgtttttgaccaatgagaagagagaaaaaagaggttgtcataaaagttgttagcaaatggttgttcaaatatcattgctc 37631255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 4842501 - 4842408
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||||||| ||||||||||  ||  ||||| | ||||||||||||| |||||||| |||||||| ||||| ||||||||||||    
T  4842501 tttttctctctccattgtttttgaccaatgaaaaaagagaaaatgaaggttgtcaaataggttgtatcaaatggtagttcatatatcattgctc 4842408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 36763502 - 36763407
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||| ||||| ||||||||||  ||| ||||| ||||||||||||| |||  ||| || ||||||||||||||||||||||||||||    
T  36763502 tttttctctctccgttgtttttgaccaatgaaaagagagaaaaagaaggttgtcataaaaattgttaacaaatggttgttcaaatatcattgctct 36763407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 19637365 - 19637415
Alignment:
Q  54 ttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctcttttaa 104  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19637365 ttgtcataaaggttgtaccaaatggttgttcaaatatcattgctcttttaa 19637415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 19835958 - 19836008
Alignment:
Q  54 ttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctcttttaa 104  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19835958 ttgtcataaaggttgtaccaaatggttgttcaaatatcattgctcttttaa 19836008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 8352920 - 8353020
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||||| |||| |||| ||||| |||| ||||| |||||||||||||   | |||| || |||||||||||| |||||||||||||||    
T  8352920 ttcctttttctctctccagtgtttttgatcaatgagaagagagaaaaagaaggttgtcattgaagttgttagcaaatggttgttaaaatatcattgctct 8353019  T
Q  100 t 100  Q
    |    
T  8353020 t 8353020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 13553232 - 13553316
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaata 89  Q
    |||||||||||||||| || ||||||||||  ||| ||||| |  ||| |||||||| |||||||||||||||||||||||||||    
T  13553232 tttttctctctccattatttttgaccaatgaaaagagagaaaagaaagattgtcaaataggttgtaccaaatggttgttcaaata 13553316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 305950 - 305857
Alignment:
Q  6 ttttctctctccattgttcttgaccaatgggaagggaga-agaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    |||||||||||||||||| | |||||||  |||| |||| | || || ||||||| |||| |||||||||||| ||||||||||||||||||||    
T  305950 ttttctctctccattgttttcgaccaataagaagagagagaaaaaaaagttgtcataaagattgtaccaaatgattgttcaaatatcattgctc 305857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 8757632 - 8757728
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||||||| |||||||||  |||| ||||| || ||||||||   ||| |||||||| |||| ||||||||||||||||| ||||    
T  8757632 ctttttctctctccattgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactct 8757728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 13711146 - 13711246
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||||||| || |||||||  ||| ||||| ||  | ||||||| ||| ||||||| |||| ||||||||||||||| | |||||    
T  13711146 ttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtacaaaatagttgttcaaatatcactactctt 13711245  T
Q  101 t 101  Q
    |    
T  13711246 t 13711246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 15283236 - 15283137
Alignment:
Q  1 ttcctttttctctctccatt-gttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||||||| ||| |||||||||   ||  ||||| | ||||||||||||| |  |||||| |||||||| ||||||||||||||||||    
T  15283236 ttcctttttctctctccatttgtttttgaccaataaaaaaagagaaaaggaaggttgtcaaataaattgtacgaaatggttattcaaatatcattgctct 15283137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 1574540 - 1574637
Alignment:
Q  3 cctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||||| || ||||||||||  ||| ||| | ||  |||||||||  || ||||| | ||||||||||||||||||||||||||||    
T  1574540 cctttttctctctccattttttttgaccaatgaaaagagagtaaaatgaggttgtcattaaagttgttagcaaatggttgttcaaatatcattgctct 1574637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 3959981 - 3960078
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtac-caaatggttgttcaaatatcattgct 97  Q
    ||||||||||||||||||||||| |||| |||||  ||| ||||| ||  |  |||||| ||| ||||| | ||||||||||||||||||||||||||    
T  3959981 ttcctttttctctctccattgtttttgatcaatgaaaagagagaaaaatgaaattgtcataaaagttgttcgcaaatggttgttcaaatatcattgct 3960078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 30340078 - 30340171
Alignment:
Q  1 ttcctttttctctctccattgttctt-gaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaatatca 92  Q
    |||||||||||||||| |||||| || |||||||| |||| ||||| || |||||||||  ||| ||||||||||| | |||||||||||||||    
T  30340078 ttcctttttctctctctattgttttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatca 30340171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 35792439 - 35792354
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaata 89  Q
    |||||||||||| ||||||| ||||| ||||  ||| ||||  ||||||||||| ||| ||||||||  |||||||||||||||||    
T  35792439 ctttttctctcttcattgtttttgactaatgaaaagagagagaaagaaggttgttaaataggttgtattaaatggttgttcaaata 35792354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 3091826 - 3091926
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||| ||||||||||||| ||||||||||  ||| ||||| ||  | ||||||| ||| |||||| |||||  |||||||||||||| | |||||    
T  3091826 ttcctttttttctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaataattgttcaaatatcactactctt 3091925  T
Q  101 t 101  Q
    |    
T  3091926 t 3091926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 11126549 - 11126644
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgct 97  Q
    |||||||||| |||||||||||| |||| ||||  ||||  |||| || ||  |||||| |||||||| |||||||| |||||||||||||||||||    
T  11126549 ttcctttttccctctccattgtttttgatcaataagaagaaagaaaaataaa-ttgtcataaaggttgaaccaaatgattgttcaaatatcattgct 11126644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 34913173 - 34913273
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||||||| || |||| ||||| |||| ||||| ||  |||||||||   | |||| || |||||||||||| |||||||||||||||    
T  34913173 ttcctttttctctctccattatttttgaacaatgagaagagagaaaaatgaggttgtcattgaagttgttagcaaatggttgttaaaatatcattgctct 34913272  T
Q  100 t 100  Q
    |    
T  34913273 t 34913273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 36133059 - 36133159
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||| |||||||||||| |||||||  ||| ||||| ||  | ||||||| ||| ||||||  |||| ||||||||||||||| | |||||    
T  36133059 ttcctttttctctttccattgttcttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatgaaatagttgttcaaatatcactactctt 36133158  T
Q  101 t 101  Q
    |    
T  36133159 t 36133159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 11164358 - 11164271
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||| || |||||||  ||| ||||| ||  | ||||||| ||| |||||| ||||| |||||||||||||||    
T  11164358 tttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatca 11164271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 12600133 - 12600224
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||| |||||||||||| |||||||  ||| ||||| ||  | ||||||| ||| ||||||  |||| |||||||||||||||    
T  12600133 ttcctttttctctttccattgttcttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatgaaatagttgttcaaatatca 12600224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 8555275 - 8555177
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctcttt 101  Q
    |||||| ||||||||||||| |||| |||||  ||| ||||| ||| ||||||||| ||| |||| |  |||||  |||||||||||||||||||||||    
T  8555275 ctttttttctctccattgtttttgatcaatgaaaagagagaaaaaggaggttgtcataaaagttgttggcaaataattgttcaaatatcattgctcttt 8555177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 10288241 - 10288327
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatc 91  Q
    ||||||||||||| ||||| ||||||||||  ||| ||||| | |||| |||||||| || |||||||||||  || ||||||||||    
T  10288241 tttttctctctccgttgtttttgaccaatgaaaagagagaaaaggaagattgtcaaatagattgtaccaaataattattcaaatatc 10288327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 23048069 - 23048011
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || ||||||||||    
T  23048069 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtca 23048011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 36383547 - 36383605
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || ||||||||||    
T  36383547 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtca 36383605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 8482220 - 8482127
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcat 93  Q
    |||||||||||||||||||| || || ||| || ||||| ||||| || ||| |||||| ||| |||| ||  |||||||||||||||||||||    
T  8482220 ttcctttttctctctccattattttttaccgataggaagagagaaaaataagattgtcacaaaagttgttagtaaatggttgttcaaatatcat 8482127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 9384464 - 9384565
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaatatcattgctctttta 103  Q
    ||||||||||||||||||| |||||||||| ||||  |||| || ||| |||||| ||| ||||||  ||| | |||||||||||| || | ||||||||    
T  9384464 tttttctctctccattgttattgaccaatgcgaagaaagaataacaagattgtcacaaaagttgtattaaaagagttgttcaaataacactactctttta 9384563  T
Q  104 aa 105  Q
    ||    
T  9384564 aa 9384565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 94
Target Start/End: Original strand, 13553310 - 13553347
Alignment:
Q  57 tcaaaaaggttgtaccaaatggttgttcaaatatcatt 94  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  13553310 tcaaataggttgtaccaaatggttgttcaaatatcatt 13553347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 28165214 - 28165315
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||||||| || |||||||||   ||| ||||  || ||||||||||  || |||| || ||||||||||||||||||| ||| ||||    
T  28165214 ttcctttttctctctccattatttttgaccaataaaaagagagagaaaaaaggttgtcatgaaagttgttagcaaatggttgttcaaatattatttctct 28165313  T
Q  100 tt 101  Q
    ||    
T  28165314 tt 28165315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 304974 - 304886
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgta-ccaaatggttgttcaaatatca 92  Q
    |||||||||||| |||||| |||||||||| |||| | ||| || || ||||||  |||||||||| | ||||||||||| ||||||||    
T  304974 tttttctctctcaattgtttttgaccaatgagaagagtgaacaacaaagttgtctcaaaggttgtatcaaaatggttgttaaaatatca 304886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 11828802 - 11828706
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgta-ccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||| ||||||||||  ||| ||| | || |||||||||  ||| |||||| | |||  ||||||||||||||||| |||||    
T  11828802 tttttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttgtcctaaaagttgtagcaaaaaagttgttcaaatatcattactctt 11828706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 13104564 - 13104652
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaata 89  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| ||  | ||||||| |||  ||||  || |||||||||||||||    
T  13104564 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaaattgtctcatatggttgttcaaata 13104652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 19913869 - 19913961
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca-aaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||||||| || |||||||  ||| ||||| || || |||||||   || ||||||  ||||||||||||||||||||    
T  19913869 ttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcaccgaaagttgtatgaaatggttgttcaaatatca 19913961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 32128220 - 32128311
Alignment:
Q  6 ttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||| |||||| |||||||||   ||| ||||| || ||  || ||| |||| ||||||||||| |||||||||||||||||||||    
T  32128220 ttttctctctcaattgtttttgaccaataaaaagagagaaaaaaaaa-ttatcataaagattgtaccaaatagttgttcaaatatcattgctc 32128311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 32750083 - 32750171
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaata 89  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| ||  | ||||||| |||  ||||  || |||||||||||||||    
T  32750083 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaaattgtctcatatggttgttcaaata 32750171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 35705903 - 35705803
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgta-ccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||| | || ||| |||||  ||| |||||| | |||  ||||||||||||||||| ||||    
T  35705903 ttcctttttctctctccattgtttttgaccaatgaaaagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 35705804  T
Q  100 t 100  Q
    |    
T  35705803 t 35705803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 36909826 - 36909738
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    |||||||||||||||||||| |||||||||  |||| ||||| || || |||||||  || ||||||  |||||| ||| |||||||||    
T  36909826 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcatcaaagttgtatgaaatggatgtacaaatatca 36909738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 38724299 - 38724211
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatca 92  Q
    ||||||||||||||||||| ||||||||||   || ||||| || || ||||||  |||||||||||| ||||||||||  ||||||||    
T  38724299 tttttctctctccattgtttttgaccaatgaatagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatca 38724211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 43725290 - 43725390
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| ||  | |||||   ||| |||||   ||||||||||||||||||||  ||||||    
T  43725290 ttcctttttctctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcaccgctctt 43725389  T
Q  101 t 101  Q
    |    
T  43725390 t 43725390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 45202118 - 45202018
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgta-ccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| |||| |||||  ||| ||| | || |||||||||  ||| |||||| | |||  ||||||||||||||||| ||||    
T  45202118 ttcctttttctctctccattgtttttgatcaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactct 45202019  T
Q  100 t 100  Q
    |    
T  45202018 t 45202018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 45515581 - 45515494
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca-aaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||| || |||||||  ||| ||||| ||||| |||||||  ||| ||||||  ||||||||||||||||||||    
T  45515581 tttttctctctccattgtttttaaccaatgaaaagagagaaaaagaa-gttgtcaccaaaagttgtatgaaatggttgttcaaatatca 45515494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 10550445 - 10550346
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| |||||||||   ||  ||||| || || |||||||| || ||||| | ||||||| ||| ||||||||||| ||||    
T  10550445 ttcctttttctctctccattgtttttgaccaataaaaatagagaaaaacaaagttgtcaacaaagttgtcatcaaatggatgtccaaatatcattactct 10550346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 11229307 - 11229216
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| ||  | |||||   ||| |||||   ||||||||||||||||||||    
T  11229307 ttcctttttctctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatca 11229216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 29795521 - 29795612
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||| ||||||||||||| ||||||||||  ||| ||||| ||   |||||||| ||| |||||  ||||| | |||||||||||||    
T  29795521 ttcctttttatctctccattgtttttgaccaatgaaaagagagaaaaaagtggttgtcacaaaagttgtttcaaattgatgttcaaatatca 29795612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 36582346 - 36582441
Alignment:
Q  6 ttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctctt 100  Q
    |||||||||| ||||||| |||||||||  |||  ||||| || ||||||||||  || ||||| | ||||||| ||| |||||||||||||||||    
T  36582346 ttttctctcttcattgtttttgaccaattagaatagagaaaaacaaggttgtcaccaaagttgtcatcaaatggatgtacaaatatcattgctctt 36582441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 37966441 - 37966536
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattg 95  Q
    |||| |||||||||||||||||| |||||||||  |||| ||||| || ||||||||||  || ||||| |  |||||| ||| ||||||||||||    
T  37966441 ttcccttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattg 37966536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 2464268 - 2464322
Alignment:
Q  47 aagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctcttt 101  Q
    ||||| ||||||| ||| |||||| ||||||| ||||||||||||||| ||||||    
T  2464268 aagaaagttgtcacaaaagttgtatcaaatggatgttcaaatatcatttctcttt 2464322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 4263850 - 4263760
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatat 90  Q
    ||||||||||||||||||||||| |||||||||| |||  ||||| ||  | ||||||| |||  ||| || ||| |||||||||||||||    
T  4263850 ttcctttttctctctccattgtttttgaccaatgagaaaagagaaaaaagaagttgtcataaaaattgttagcaattggttgttcaaatat 4263760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 23141438 - 23141544
Alignment:
Q  1 ttcctttttctctctccattgttctt-gaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaatatcattgctc 98  Q
    ||||||||||||| |  |||||| || |||||||| |||| ||||| || |||||||||  ||| ||||||||||| | ||||||||||||||| | |||    
T  23141438 ttcctttttctctttttattgttttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 23141537  T
Q  99 ttttaaa 105  Q
     ||||||    
T  23141538 ctttaaa 23141544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 23553228 - 23553334
Alignment:
Q  1 ttcctttttctctctccattgttctt-gaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaatatcattgctc 98  Q
    ||||||||||||| |  |||||| || |||||||| |||| ||||| || |||||||||  ||| ||||||||||| | ||||||||||||||| | |||    
T  23553228 ttcctttttctctttttattgttttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactc 23553327  T
Q  99 ttttaaa 105  Q
     ||||||    
T  23553328 ctttaaa 23553334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 37076742 - 37076832
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaatatcatt 94  Q
    ||||| ||||||||||||| |||||||||| ||||  |||| || |||||||||| |||  |||||| ||| | |||||||||||| ||||    
T  37076742 tttttttctctccattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaaattgtactaaaagagttgttcaaataacatt 37076832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 43026025 - 43026095
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaa 75  Q
    |||||||||||| |||||| || ||||||| |||| ||||| || || ||||||  |||||||||||||||    
T  43026025 tttttctctctctattgtttttaaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaa 43026095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 43791769 - 43791675
Alignment:
Q  9 tctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctctttt 102  Q
    |||||||| |||||| |||||||||   ||| ||||| | | ||||||||| ||| ||||| || ||| |||||||||||||||||| |||||||    
T  43791769 tctctctctattgtttttgaccaataaaaagagagaaaaggtaggttgtcacaaaagttgtcactaaaaggttgttcaaatatcattactctttt 43791675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 44484642 - 44484584
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || || |||||||    
T  44484642 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtca 44484584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 546371 - 546290
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgt 82  Q
    |||||||||||||||| |||||| | |||||||| |||| ||||| |  || |||||||| || |||||  |||||||||||    
T  546371 ttcctttttctctctctattgttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcacaaatggttgt 546290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 5067627 - 5067594
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  5067627 ttcctttttctctctccattgtttttgaccaatg 5067594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 6365271 - 6365368
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||| ||||||| |||||||||   ||| ||||| ||  ||||||||| ||| |||||   |||| | ||||||||||||| |||||    
T  6365271 ttcctttttctctcttcattgtttttgaccaataaaaagagagaaaaaagaggttgtcataaaagttgttttaaatagatgttcaaatatcactgctc 6365368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 12208527 - 12208560
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  12208527 ttcctttttctctctccattgttattgaccaatg 12208560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 32688530 - 32688497
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  32688530 ttcctttttctctctccattgtttttgaccaatg 32688497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 1052473 - 1052381
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattg 95  Q
    ||||||||||||||||| || ||||| |||  |||| ||||| ||  |||||||||  || ||||| | |||||||||||| |||||||||||    
T  1052473 ctttttctctctccattatttttgactaataagaagagagaaaaatgaggttgtcattaaagttgttagcaaatggttgttaaaatatcattg 1052381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3196073 - 3196017
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgt 57  Q
    |||||||||||||||||||| || |||||||||  |||| ||||| || ||||||||    
T  3196073 ttcctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgt 3196017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3366114 - 3366205
Alignment:
Q  1 ttcctttttct--ctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaata 89  Q
    |||||||||||  |||||||||||| |||||||||| ||||  |||| || |||||||||| ||| ||| ||| ||| | ||||||||||||    
T  3366114 ttcctttttctttctctccattgttattgaccaatgagaagaaagaataataaggttgtcacaaaagttatactaaaagagttgttcaaata 3366205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 12192032 - 12192064
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  12192032 ttcctttttctctctccattgtttttgaccaat 12192064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 19523387 - 19523355
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  19523387 ttcctttttctctctccattgtttttgaccaat 19523355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30413718 - 30413686
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  30413718 ttcctttttctctctccattgtttttgaccaat 30413686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30973977 - 30973945
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  30973977 ttcctttttctctctccattgtttttgaccaat 30973945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 31847616 - 31847648
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  31847616 ttcctttttctctctccattgtttttgaccaat 31847648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 38021441 - 38021473
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  38021441 ttcctttttctctctccattgtttttgaccaat 38021473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 3e-30; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 18157171 - 18157064
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc-t 99  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| | ||||||||||||| |||||||||||||| ||||||||||||||||||||| |    
T  18157171 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtaccaaatagttgttcaaatatcattgctcat 18157072  T
Q  100 tttaaaat 107  Q
    ||||||||    
T  18157071 tttaaaat 18157064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2469777 - 2469878
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    |||||||||||||||||||| || || |||||||  ||  ||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2469777 ttcctttttctctctccattattttttaccaatgaaaatagagaaaaggaaggttgtcaaataggttgtaccaaatggttgttcaaatatcattgctctt 2469876  T
Q  101 tt 102  Q
    ||    
T  2469877 tt 2469878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 25940653 - 25940552
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    |||||||||||||||| |||||| ||||||||||  ||| ||||| | ||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  25940653 ttcctttttctctctcaattgtttttgaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatagttgttcaaatatcattgctctt 25940554  T
Q  101 tt 102  Q
    ||    
T  25940553 tt 25940552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 35098567 - 35098470
Alignment:
Q  7 tttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctcttttaa 104  Q
    ||||||||||||||||| || ||||||| |||| ||||| | |||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  35098567 tttctctctccattgttttttaccaatgagaagagagaaaatgaagattgtcaaaaaggttgtaccaaatagttgttcaattatcattgctcttttaa 35098470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 6655602 - 6655505
Alignment:
Q  2 tcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||||||||| || |||||||  ||| || || |||||| ||||||||||| |||||||||||||||||| |||||||||||||||    
T  6655602 tcctttttctctctccattgtttttaaccaatgaaaagagataaaaagaagattgtcaaaaagattgtaccaaatggttgtttaaatatcattgctct 6655505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 43107701 - 43107792
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgc 96  Q
    ||||||||||||||||||| ||||||||||  |||  |||| | ||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  43107701 tttttctctctccattgtttttgaccaatgaaaagaaagaaaaggaaggttgttaaataggttgtaccaaatggttgttcaaatatcattgc 43107792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 40693514 - 40693410
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||| |||||| |||||||||| |||| ||||| ||| ||||||||| | | |||| || || |||||||||||||||||||||||||    
T  40693514 ttcctttttctctctctattgtttttgaccaatgagaagagagaaaaaggaggttgtcatagaagttgttagcacatggttgttcaaatatcattgctct 40693415  T
Q  100 tttaa 104  Q
    |||||    
T  40693414 tttaa 40693410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9031292 - 9031390
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||| |||| ||||| || |||||||||   ||| ||||| | ||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  9031292 ttcctttttttctcaccattatttttgaccaataaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatggttgttcaaatatcattgctct 9031390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 27688725 - 27688819
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    |||||||||||||||||||| ||||||||||  ||| ||||| | ||||||||||||| || |||||||||||  |||| |||||||||||||||    
T  27688725 ctttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaatagattgtaccaaataattgtacaaatatcattgctc 27688819  T

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Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 43079618 - 43079515
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatggg---aagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgct 97  Q
    ||||||||||||||||||||||| ||||||||||     ||| ||||| |  |||||||||||| | ||| |||||||||||||||||||||||||||||    
T  43079618 ttcctttttctctctccattgtttttgaccaatgatgaaaagagagaaaagaaaggttgtcaaataagttttaccaaatggttgttcaaatatcattgct 43079519  T
Q  98 cttt 101  Q
    ||||    
T  43079518 cttt 43079515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 43444721 - 43444798
Alignment:
Q  9 tctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaa 86  Q
    ||||||||||||||| || |||||||  ||||||||| | ||||||||||||| ||||||||||||||||||||||||    
T  43444721 tctctctccattgttttttaccaatgaaaagggagaaaatgaaggttgtcaaataggttgtaccaaatggttgttcaa 43444798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 35072204 - 35072132
Alignment:
Q  28 accaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||| |||| ||||| | |||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  35072204 accaatgagaagagagaaaatgaagattgtcaaaaaggttgtaccaaatagttgttcaaatatcattgctctt 35072132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 30941270 - 30941359
Alignment:
Q  9 tctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||| || |||||||  ||  ||||| | ||||||||||||| ||||||||| |||||||||||||||||| |||||||    
T  30941270 tctctctccattgtttttaaccaatgaaaaaagagaaaaggaaggttgtcaaataggttgtactaaatggttgttcaaatatgattgctc 30941359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 37392128 - 37392228
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| || |||||||  ||| ||||| ||  |||||||||  || ||||| | ||||||||||||||||||||||||||||    
T  37392128 ttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctct 37392227  T
Q  100 t 100  Q
    |    
T  37392228 t 37392228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 8061727 - 8061633
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||| |||||||||  |||| || || |||||| || |||  || |||||||||||||||||||||||||| |||||||||    
T  8061727 tttttctctctccattgtttttgaccaataagaagagataa-aagaagattatcatgaaagttgtaccaaatggttgttcaaatattattgctctt 8061633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 2600518 - 2600428
Alignment:
Q  3 cctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatca 92  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| || || ||||||  |||||||||||| ||||||||||  ||||||||    
T  2600518 cctttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatca 2600428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 4678149 - 4678247
Alignment:
Q  2 tcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||||||||| ||||||||||  ||  ||||| ||| |||||||||  || |||| || |||||||||||| |||||||||||||||    
T  4678149 tcctttttctctctccattgtttttgaccaatgaaaatagagaaaaaggaggttgtcatcaaagttgttagcaaatggttgtttaaatatcattgctct 4678247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 46148251 - 46148349
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||  || |||||||| |  || |||| || |||||||||||||||||||||||||||    
T  46148251 ttcctttttctctctccattgtttttgaccaatgaaaagagagagaaataaggttgttatgaaagttgttaacaaatggttgttcaaatatcattgctc 46148349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 12141969 - 12142060
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||| || |||||| ||||||||||  |||  |||| || || ||||||| ||| |||||| |||||||||||||||||||||    
T  12141969 ttcctttttctctttctattgtttttgaccaatgaaaagaaagaaaaaaaaagttgtcacaaaagttgtatcaaatggttgttcaaatatca 12142060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 21588903 - 21588816
Alignment:
Q  11 tctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgct 97  Q
    ||||||||||||| |||||||||| |||| ||||| ||| ||||||||| | | |||| || || |||||||||||||||||||||||    
T  21588903 tctctccattgtttttgaccaatgagaagagagaaaaaggaggttgtcatagaagttgttagcacatggttgttcaaatatcattgct 21588816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 40077344 - 40077435
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattg 95  Q
    ||||||||||| ||||||| |||||||||  ||||  |||| ||| ||||||||| ||| |||| || ||||||||||||||||||||||||    
T  40077344 tttttctctcttcattgtttttgaccaataagaagaaagaaaaaggaggttgtcataaaagttgttaacaaatggttgttcaaatatcattg 40077435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 10591134 - 10591032
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||| |||||| |||| ||||  |||  ||||| | |  |||||||| ||| ||||| ||||||| ||||||||||||||||||||||    
T  10591134 ttcctttttctctctctattgtttttgatcaataagaatagagaaaaggtgggttgtcataaaagttgtcaccaaatagttgttcaaatatcattgctct 10591035  T
Q  100 ttt 102  Q
    |||    
T  10591034 ttt 10591032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 25272676 - 25272778
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| |||||||||  ||||  |||| || |||||||||| ||| ||||||| ||| | |||||||||||| || || |||    
T  25272676 ttcctttttctctctccattgttattgaccaataagaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactgttct 25272775  T
Q  100 ttt 102  Q
    |||    
T  25272776 ttt 25272778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 48866916 - 48866815
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||||||| ||||| ||||  ||| ||||| ||  ||||||||| ||| |||||  ||||| | ||||||||||||| | |||||    
T  48866916 ttcctttttctctctccattgtttttgactaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcactactctt 48866817  T
Q  101 tt 102  Q
    ||    
T  48866816 tt 48866815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 5978664 - 5978755
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaaga-agaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||| | |||| ||||||| ||  |||||| || ||||||||||||||||||    
T  5978664 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaatagaa-gttgtcacaagagttgtatcatatggttgttcaaatatca 5978755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 28110045 - 28110137
Alignment:
Q  6 ttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgct 97  Q
    |||||||||||||||||| ||||||||||  ||| ||||  ||  |||| |||| ||| ||||| | ||||||||||||||||||||||||||    
T  28110045 ttttctctctccattgtttttgaccaatgaaaagagagagaaatgaggtcgtcataaaagttgttagcaaatggttgttcaaatatcattgct 28110137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 37970022 - 37970110
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatca 92  Q
    |||||||||||| |||||| |||||||||| |||| ||||| || || ||||||  ||| |||||||| ||||||||||| ||||||||    
T  37970022 tttttctctctctattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaatgttgtaccaaaatggttgttaaaatatca 37970110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 8792583 - 8792485
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||  ||||||| ||||| ||||  ||| ||||| ||    ||||||| ||| |||||| ||||||||||||||||||||||| |||||    
T  8792583 ttcctttttctctcaacattgtttttgactaatgaaaagagagaaaaaa---gttgtcacaaaagttgtatcaaatggttgttcaaatatcattactctt 8792487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 42431808 - 42431866
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || ||||||||||    
T  42431808 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtca 42431866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 29034179 - 29034240
Alignment:
Q  10 ctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtac 71  Q
    |||||| ||||||| ||||||||||  ||| ||||| |||||| ||||||||||||||||||    
T  29034179 ctctcttcattgtttttgaccaatgaaaagagagaaaaagaagattgtcaaaaaggttgtac 29034240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 38978577 - 38978678
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||||||| ||||| |||  |||| ||||| || ||||||||||  || |||||    || || ||| |||||||||||||||||    
T  38978577 ttcctttttctctctccattgtttttgacaaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaaggatgtacaaatatcattgctctt 38978676  T
Q  101 tt 102  Q
    ||    
T  38978677 tt 38978678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 44185265 - 44185353
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaatatca 92  Q
    |||||||||||| |||||| |||||||||| |||| ||||| ||  ||||||||  ||| |||||| |||| | |||||||||||||||    
T  44185265 tttttctctctctattgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagttgtatcaaaagagttgttcaaatatca 44185353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 26041395 - 26041493
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctc 98  Q
    ||||||||| ||||||||||||| |||||||||  |||| ||||| || || |||||||  || ||||| |  |||||| ||| |||||||||||||||    
T  26041395 ttcctttttttctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcataaaatggatgtacaaatatcattgctc 26041493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 30864403 - 30864345
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| |||||||||  |||  ||||| || ||||||||||    
T  30864403 ttcctttttctctctccattgtttttgaccaataagaaaagagaaaaacaaggttgtca 30864345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 32428206 - 32428252
Alignment:
Q  54 ttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    |||||| ||| |||||| ||||| |||||||||||||||||||||||    
T  32428206 ttgtcataaaagttgtatcaaatagttgttcaaatatcattgctctt 32428252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 33050268 - 33050366
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctc 98  Q
    |||||||||||||||| |||||| |||||||||  |||| ||||  || ||||||||||  || ||||| |  |||||| ||| |||||||||||||||    
T  33050268 ttcctttttctctctctattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 33050366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 39137197 - 39137151
Alignment:
Q  54 ttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    |||||| ||| |||||||||||||| ||||||||||||||| |||||    
T  39137197 ttgtcataaaagttgtaccaaatggatgttcaaatatcatttctctt 39137151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 5378712 - 5378745
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  5378712 ttcctttttctctctccattgtttttgaccaatg 5378745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 12102695 - 12102610
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaa 86  Q
    ||||||||||||||||||||||| || |||||||  ||| ||||| ||  | ||||||| ||| |||||   ||||||||||||||    
T  12102695 ttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaataagttgtcacaaaagttgtctgaaatggttgttcaa 12102610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 31982142 - 31982175
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  31982142 ttcctttttctctctccattgtttttgaccaatg 31982175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 33465023 - 33464926
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||||||||||| |||| |||||  |||  | || || |||||||||| ||| ||||||| ||  | ||||||||||| || |||||    
T  33465023 ttcctttttctctctccattgttattgatcaatgaaaagaaaaaataacaaggttgtcacaaaagttgtactaagagattgttcaaataacactgctc 33464926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 38197746 - 38197779
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  38197746 ttcctttttctctctccattgtttttgaccaatg 38197779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 42118685 - 42118625
Alignment:
Q  1 ttcctttttctct--ctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    |||||||||||||  ||| |||||| |||||||||  |||| |||||||||||||||||||    
T  42118685 ttcctttttctctttctctattgtttttgaccaataagaagagagaagaagaaggttgtca 42118625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 45607109 - 45607142
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  45607109 ttcctttttctctctccattgtttttgaccaatg 45607142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 47193012 - 47193045
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  47193012 ttcctttttctctctccattgtttttgaccaatg 47193045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 49142503 - 49142434
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgta 70  Q
    ||||||||| ||||||||||||| |||||||||| ||||  | || || |||||||||| ||| ||||||    
T  49142503 ttcctttttttctctccattgttattgaccaatgagaagaaaaaataacaaggttgtcacaaaagttgta 49142434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 100
Target Start/End: Original strand, 4971444 - 4971472
Alignment:
Q  72 caaatggttgttcaaatatcattgctctt 100  Q
    |||||||||||||||||||||||||||||    
T  4971444 caaatggttgttcaaatatcattgctctt 4971472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 10619645 - 10619589
Alignment:
Q  41 gagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgc 96  Q
    ||||| ||| ||||||||| ||| ||||| | |||||||||||||||||||||||||    
T  10619645 gagaaaaaggaggttgtcataaaagttgttagcaaatggttgttcaaatatcattgc 10619589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 11070315 - 11070387
Alignment:
Q  3 cctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaa 75  Q
    |||||||||||||| |||||| ||||||||||  ||| |||||||| || ||||||  |||| || |||||||    
T  11070315 cctttttctctctctattgtttttgaccaatgaaaagagagaagaacaaagttgtctcaaagattctaccaaa 11070387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 23034295 - 23034207
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaatatca 92  Q
    |||||||||||| |||||| |||||||||  |||  ||| | || |||||||||  ||| ||||||||||| | |||||||||||||||    
T  23034295 tttttctctctctattgtttttgaccaataagaaaagagcacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatca 23034207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 95
Target Start/End: Original strand, 29034257 - 29034293
Alignment:
Q  59 aaaaaggttgtaccaaatggttgttcaaatatcattg 95  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  29034257 aaaaaggttataccaaatggttgtttaaatatcattg 29034293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 34349013 - 34348922
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggaga-agaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||||||| || |||||||  ||| |||| | ||||| ||||| ||||| ||||||  |||| | |||||||||||||    
T  34349013 ttcctttttctctctccattgttttttaccaatgaaaagagagagaaaagaa-gttgttaaaaaagttgtatgaaatagatgttcaaatatca 34348922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 41910171 - 41910079
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaatatca 92  Q
    |||||||||||||||| |||||| |||||||||  |||| ||  | || |||||||||  ||| ||||||||||| |  ||||||||||||||    
T  41910171 ttcctttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcctaaaagttgtaccaaaagaattgttcaaatatca 41910079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 44895593 - 44895645
Alignment:
Q  48 agaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    |||| ||||||| ||| ||||||  |||||||||||||||||||||| |||||    
T  44895593 agaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttctctt 44895645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 48639371 - 48639279
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatg-gttgttcaaatatca 92  Q
    |||||||||||||||| |||||| |||||||||  |||| ||  | || ||||||||   ||| ||||||||||| | |||||||||||||||    
T  48639371 ttcctttttctctctctattgtttttgaccaatacgaagagaacacaacaaggttgttccaaaagttgtaccaaaagagttgttcaaatatca 48639279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 4e-29; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 32729974 - 32730079
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    |||||||||||||||| |||||| |||| |||||  ||| ||||| ||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  32729974 ttcctttttctctctctattgtttttgatcaatgaaaagagagaaaaagaatgttgtcaaataggttgtaccaaatggttgttcatatatcattgctctt 32730073  T
Q  101 ttaaaa 106  Q
    ||||||    
T  32730074 ttaaaa 32730079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 21443773 - 21443873
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||||||| ||||||||||  ||| || || | |||||||||| || || ||||||||||| |||||||||||||||||||||||    
T  21443773 ttcctttttctctctccattgtttttgaccaatgaaaagagataaaatgaaggttgtccaatagattgtaccaaatagttgttcaaatatcattgctctt 21443872  T
Q  101 t 101  Q
    |    
T  21443873 t 21443873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 608643 - 608545
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcattgctctttt 102  Q
    ||||||||||||||||||| |||||||||| |||| ||||| || |||||||||  ||  |||||||| |||| |||||||||||||||||||||||||    
T  608643 tttttctctctccattgtttttgaccaatgagaagagagaacaacaaggttgtcccaacagttgtaccaaaatagttgttcaaatatcattgctctttt 608545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 8173295 - 8173201
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    |||||| |||||||||||||  |||||||||  ||| ||||| |  |||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  8173295 ctttttttctctccattgtttctgaccaatgaaaagagagaaaagaaaggttgtcaaataggttataccaaatggttgttcaaatatcattgctc 8173201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 12044415 - 12044513
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctc 98  Q
    ||||||||||||||||||||||| |||||||||| |||  ||||| ||| ||||||||| ||| |||| || || ||||||||||||||||||||||||    
T  12044415 ttcctttttctctctccattgtttttgaccaatgagaaaagagaaaaaggaggttgtcataaaagttgttagcacatggttgttcaaatatcattgctc 12044513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 16533246 - 16533144
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaa-tggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| || |||||||  ||| ||||| | ||| ||||||||| ||||| ||||||| || |||||||||||||||||||||    
T  16533246 ttcctttttctctctccattgttttttaccaatgaaaagagagaaaaggaaagttgtcaaataggttataccaaattgattgttcaaatatcattgctct 16533147  T
Q  100 ttt 102  Q
    |||    
T  16533146 ttt 16533144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 23653879 - 23653778
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||| |||||| |||||| ||| |||| ||||| ||  ||||||||| ||| |||| || ||||||||||||||||||| ||||||||    
T  23653879 ttcctttttctctctcaattgtttttgacctatgagaagagagaaaaatgaggttgtcataaaagttgttagcaaatggttgttcaaatattattgctct 23653780  T
Q  100 tt 101  Q
    ||    
T  23653779 tt 23653778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 11742970 - 11742872
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctc 98  Q
    |||||||||||||||| |||||| |||||||||| |||| ||||| ||| ||||||||| | | |||| || || |||||| |||||||||||||||||    
T  11742970 ttcctttttctctctctattgtttttgaccaatgagaagagagaaaaaggaggttgtcatagaagttgttagcacatggttcttcaaatatcattgctc 11742872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 25567426 - 25567382
Alignment:
Q  54 ttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  25567426 ttgtcataaaggttgtaccaaatggttgttcaaatatcattgctc 25567382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 32644697 - 32644800
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| || ||||||| |||| ||||| ||  ||||||||| | | |||| || || |||||||||||||||||||| |||     
T  32644697 ttcctttttctctctccattgttttttaccaatgagaagagagaaaaatgaggttgtcatagaagttgttagcacatggttgttcaaatatcatttctca 32644796  T
Q  100 ttta 103  Q
    ||||    
T  32644797 ttta 32644800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 16743252 - 16743151
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||| |||||| |||||||||| |||| ||||| ||  |||||||||   | |||| || ||||| |||||| |||||||||||||||    
T  16743252 ttcctttttctctctcaattgtttttgaccaatgagaagagagaaaaatgaggttgtcattgaagttgttagcaaattgttgttaaaatatcattgctct 16743153  T
Q  100 tt 101  Q
    ||    
T  16743152 tt 16743151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 20712155 - 20712250
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    |||||| |||||||||||| |||| ||| | |||| ||||| ||| ||||||||| | | ||||| | |||||||||||||||||||||| |||||    
T  20712155 tttttccctctccattgtttttgatcaacgagaagagagaaaaaggaggttgtcatagaagttgttaacaaatggttgttcaaatatcatagctct 20712250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 9188932 - 9188834
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctc 98  Q
    |||||||||||||||||||| || |||||||||  |||| ||||| ||  || || ||| ||| |||| || |||||||||||| ||||||||||||||    
T  9188932 ttcctttttctctctccattatttttgaccaataagaagagagaaaaatgagattatcataaaagttgttagcaaatggttgtttaaatatcattgctc 9188834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 1897774 - 1897871
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctcttt 101  Q
    |||||||||||| ||||||| ||||||||||  ||| ||||| ||  ||||||||| ||| |||||  ||||| | ||||||||||||| | ||||||    
T  1897774 ctttttctctcttcattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcactactcttt 1897871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 22422239 - 22422335
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||| ||||| |||| |||| ||||| || || |||||   ||| |||||||| ||||  |||||||||||||||| |||||    
T  22422239 tttttctctctccattgtttttgactaatgagaagagagaacaacaaagttgtaccaaaagttgtaccaaaataattgttcaaatatcattactctt 22422335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 25561875 - 25561831
Alignment:
Q  54 ttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    |||||| |||||| ||||||||| |||||||||||||||||||||    
T  25561875 ttgtcataaaggtggtaccaaatagttgttcaaatatcattgctc 25561831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 26101389 - 26101345
Alignment:
Q  54 ttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    |||||| |||||| ||||||||| |||||||||||||||||||||    
T  26101389 ttgtcataaaggtggtaccaaatagttgttcaaatatcattgctc 26101345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 2582751 - 2582838
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||| |||| |||||  ||| ||||| ||  ||||||||| ||| |||||  ||||| | |||||||||||||    
T  2582751 tttttctctctccattgtttttgatcaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 2582838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 3089050 - 3089093
Alignment:
Q  9 tctctctccattgttcttgaccaatgggaagggagaagaagaag 52  Q
    ||||||||||||||| |||||||||| |||| ||||||||||||    
T  3089050 tctctctccattgtttttgaccaatgagaagagagaagaagaag 3089093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 9954633 - 9954735
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggag-aagaagaaggttgtca-aaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    |||| |||||||||||||||||| || |||||||  ||| ||| |||||||| |||||||  ||| ||||||  |||||||||||||||||||| | |||    
T  9954633 ttccgttttctctctccattgtttttaaccaatgaaaagagagaaagaagaa-gttgtcaccaaaagttgtattaaatggttgttcaaatatcactcctc 9954731  T
Q  99 tttt 102  Q
    ||||    
T  9954732 tttt 9954735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 2165286 - 2165212
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaa 75  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||| | |  |||||||||| ||| |||||| ||||    
T  2165286 ttcctttttctctctccattgtttttgaccaatgaaaagagagcacatcaaggttgtcacaaaagttgtagcaaa 2165212  T

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Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 2176919 - 2176845
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaa 75  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||| | |  |||||||||| ||| |||||| ||||    
T  2176919 ttcctttttctctctccattgtttttgaccaatgaaaagagagcacatcaaggttgtcacaaaagttgtagcaaa 2176845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 11017467 - 11017525
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||  || ||||||||||    
T  11017467 ttcctttttctctctccattgtttttgaccaataagaagagagagaaacaaggttgtca 11017525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 12177652 - 12177730
Alignment:
Q  2 tcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggtt 80  Q
    ||||||||||||||||||| || |||||||||   ||  ||||| |||||||||||||  || |||||| |||||||||    
T  12177652 tcctttttctctctccattatttttgaccaataccaaaagagaaaaagaaggttgtcatgaaagttgtatcaaatggtt 12177730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 34021158 - 34021057
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggaga-agaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    |||||||||| ||||| |||||| ||||||||||  ||| |||| | |||||| |||| ||||| |||||  ||||||| ||||||||||||| | ||||    
T  34021158 ttcctttttccctctctattgtttttgaccaatgaaaagagagagaaaagaag-ttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 34021060  T
Q  100 ttt 102  Q
    |||    
T  34021059 ttt 34021057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 32457238 - 32457205
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  32457238 ttcctttttctctctccattgtttttgaccaatg 32457205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 7693400 - 7693500
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||||||| | |||||||  |||| ||||| |  ||  ||||||  || ||||| |||||||||||| || |||||| | |||||    
T  7693400 ttcctttttctctctccattgttttggaccaataagaagagagaaaataaaaattgtcatcaaagttgtcccaaatggttgtacatatatcactactctt 7693499  T
Q  101 t 101  Q
    |    
T  7693500 t 7693500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 15328574 - 15328606
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  15328574 ttcctttttctctctccattgtttttgaccaat 15328606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 22079584 - 22079636
Alignment:
Q  48 agaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    |||| ||||||| ||| ||||||  |||||||||||||||||||||| |||||    
T  22079584 agaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttctctt 22079636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 25924850 - 25924818
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  25924850 ttcctttttctctctccattgtttttgaccaat 25924818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 28549003 - 28548907
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca-aaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||| || |||||||  ||| || || || || |||||||  ||| ||||||  ||||||||||||||||| |||| |||||    
T  28549003 tttttctctctccattgtttttaaccaatgaaaagagaaaaaaaaaaagttgtcaccaaaagttgtataaaatggttgttcaaataacattactctt 28548907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 16580 - 16483
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||| ||||||||||||||||| ||||||||||  | | ||||| |||||| |||||||||| ||||||||||||||||||| ||||||||||||||    
T  16580 ttcctatttctctctccattgtttttgaccaatgaaacgagagaaaaagaagattgtcaaaaaagttgtaccaaatggttgttgaaatatcattgctc 16483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 56264 - 56361
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||| ||||||||||||||||| ||||||||||  | | ||||| |||||| |||||||||| ||||||||||||||||||| ||||||||||||||    
T  56264 ttcctatttctctctccattgtttttgaccaatgaaacgagagaaaaagaagattgtcaaaaaagttgtaccaaatggttgttgaaatatcattgctc 56361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 440807 - 440902
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||| || |||||||  ||| ||||| |  ||| |||||||| || |||||||||||||||||||||||||||||||||||    
T  440807 tttttctctctccattgttttttaccaatgaaaagagagaaaagaaagattgtcaaatagattgtaccaaatggttgttcaaatatcattgctctt 440902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 147242 - 147143
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || ||||||||||  || ||||| |   ||||| ||| ||||||||||||||||    
T  147242 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctct 147143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 15174 - 15084
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||||||||| || |||||||  ||  ||||| |||||| |||||| ||| |||||||||||| |||||||||||||||    
T  15174 ttcctttttctctctccattgtttttaaccaatgaaaaaagagaaaaagaag-ttgtcacaaaagttgtaccaaatagttgttcaaatatca 15084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 337203 - 337301
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctct 99  Q
    ||||||||||||||||||||||| |||||||||   ||  ||||| |||||  |||| |||||  |||||||||||  |||||||||||||||||||||    
T  337203 ttcctttttctctctccattgtttttgaccaataaaaaaagagaaaaagaaaattgtaaaaaatattgtaccaaataattgttcaaatatcattgctct 337301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 88893 - 88925
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaat 33  Q
    ||||||||||||||||||||||| |||||||||    
T  88893 ttcctttttctctctccattgtttttgaccaat 88925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 10502 - 10397
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctctt 100  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||||  ||  | ||||||| ||| |||||  || ||||||||||||||| || ||||| |    
T  10502 ttcctttttctctctccattgtttttgaccaatgaaaagagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactgctcat 10403  T
Q  101 ttaaaa 106  Q
    ||||||    
T  10402 ttaaaa 10397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 5314 - 5415
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 99  Q
    |||||||||||||||||||| || || ||||||| |||| ||||| | | ||| |||||  || ||||| | ||||||||||||||||||||||| ||||    
T  5314 ttcctttttctctctccattatttttaaccaatgagaagagagaaaagggaggctgtcatgaaagttgttagcaaatggttgttcaaatatcattactct 5413  T
Q  100 tt 101  Q
    ||    
T  5414 tt 5415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 204433 - 204339
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcatt 94  Q
    |||||||||||| ||| |||||| |||||||||  |||| ||||| ||| || |||||| ||| ||||| |||||| ||||||| ||||||||||    
T  204433 ttcctttttctccctctattgtttttgaccaataagaagagagaaaaagtagattgtcacaaaagttgtcaccaaaaggttgtttaaatatcatt 204339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 36087 - 36178
Alignment:
Q  4 ctttttctctctccattgttcttgaccaatgggaagggagaagaagaag--gttgtca-aaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||||||||||||||| || ||||||||||  ||| ||||| || ||   ||||||| |||| |||||| |||||||||||||||||||||    
T  36087 ctttttctctctccattatttttgaccaatgaaaagagagaaaaaaaacaagttgtcacaaaaagttgtatcaaatggttgttcaaatatca 36178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 48315 - 48362
Alignment:
Q  53 gttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctcttt 101  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  48315 gttgtcataaaggttgtaccaaatggctgttcaaatat-attgctcttt 48362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 18093 - 18179
Alignment:
Q  5 tttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 92  Q
    ||||| ||||||||||||| || |||||||  ||| ||||| || ||| |||||| ||| |||||| ||||| |||||||||||||||    
T  18093 tttttatctctccattgtttttaaccaatgaaaagagagaaaaaaaag-ttgtcataaaagttgtatcaaatagttgttcaaatatca 18179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 1482 - 1424
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtca 59  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || || |||||||    
T  1482 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtca 1424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 18275 - 18179
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtac-caaatggttgttcaaatatcattgctc 98  Q
    |||||||||||||| || ||||| ||||| |||| |||| ||||  | | ||||||||| ||| ||||||  |||||||||||||||||||||||||||    
T  18275 ttcctttttctctcccc-ttgtttttgac-aatgagaagagagagaagggaggttgtcataaaagttgtaagcaaatggttgttcaaatatcattgctc 18179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 17123 - 17197
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaaa 75  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||| | |  |||||||||| ||| |||||| ||||    
T  17123 ttcctttttctctctccattgtttttgaccaatgaaaagagagcacatcaaggttgtcacaaaagttgtagcaaa 17197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 3028 - 3122
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgta-ccaaatggttgttcaaatatcatt 94  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||| | || || ||||||  ||| |||||| | |||  |||||||||||||||||    
T  3028 ttcctttttctctctccattgtttttgaccaatgaaaagagagcacaataaagttgtcccaaaagttgtagcaaaaaagttgttcaaatatcatt 3122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4837 - 4764
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatgggaagggagaagaagaaggttgtcaaaaaggttgtaccaa 74  Q
    |||||||||| ||||| |||||| || ||||||| |||| |||||||| ||  |||||  ||||||||||||||    
T  4837 ttcctttttcactctctattgtttttaaccaatgagaagagagaagaataaaattgtcttaaaggttgtaccaa 4764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 11522 - 11489
Alignment:
Q  1 ttcctttttctctctccattgttcttgaccaatg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  11522 ttcctttttctctctccattgtttttgaccaatg 11489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 5004 - 4959
Alignment:
Q  53 gttgtcaaaaaggttgtaccaaatggttgttcaaatatcattgctc 98  Q
    ||||||| ||||||||||  |||||||||||||||||| |||||||    
T  5004 gttgtcataaaggttgtattaaatggttgttcaaatattattgctc 4959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 240132 - 240185
Alignment:
Q  42 agaagaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatcattg 95  Q
    |||| |||||||||||||  || ||||||| || ||||||||||||||||||||    
T  240132 agaaaaagaaggttgtcatgaaagttgtactaagtggttgttcaaatatcattg 240185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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