View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14297_low_29 (Length: 309)
Name: NF14297_low_29
Description: NF14297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14297_low_29 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 36 - 309
Target Start/End: Original strand, 36670305 - 36670580
Alignment:
| Q |
36 |
ttaattaaaaaacttaccaaaaacaacactgaaatattattttattttgttgcatgacattatcatgccatgatatatatagtatagacttataagaccc |
135 |
Q |
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| T |
36670305 |
ttaattaaaaaacttaccaaaaacaacactgaaatattattttattttgttgcatgacattatcatgccatgatatatatagtatagacttataag-ccc |
36670403 |
T |
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| Q |
136 |
ttttagctctgtaatgtaacattattgtcgaagtttgttattactaat---agggtttttgaccaacataattacccgggggatcatagttgcaagttac |
232 |
Q |
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| T |
36670404 |
ttttagctctgtaatgtaatattattgtcgaagtttgttattactaataatagggtttttgaccaacataattgcccgggggatcatagttgcaagtgac |
36670503 |
T |
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| Q |
233 |
aaaccaccatccattggtacattgtaccctagcacaccctaaacggacagagttacgccacacaacttgagtataat |
309 |
Q |
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| T |
36670504 |
aaaccaccatccattggtacattgtaccctagcacaccctaaacggacagagttacgccacacaacttgagtataat |
36670580 |
T |
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