View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14297_low_30 (Length: 298)
Name: NF14297_low_30
Description: NF14297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14297_low_30 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 30880938 - 30880641
Alignment:
| Q |
1 |
tggtgttggatcatagcactattaataacgttgatgatataacttgttccttaatggttcagttacagataccacatactcttaaaagagaagaatagct |
100 |
Q |
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| T |
30880938 |
tggtgttggatcatagcactattaataaccttgataatataacttgttccttaatggttcagttacagataccacatactcttaaaagagaagaatagct |
30880839 |
T |
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| Q |
101 |
caattctcagtaaaaacttgttaaccaaagttggatcatctgaattctattgaaaccaccttggtcgatagtttggctttggcaaaacactcaataaata |
200 |
Q |
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| T |
30880838 |
caattctcagtaaaaacttgttaaccaaagttggatcatctgaattctattgaaaccaccttggtcgatagtttggctttggcaaaacactcaataaata |
30880739 |
T |
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| Q |
201 |
acatcctagatgatgatcaacatctggctttggcacaatagtcttcaacaggaaaatcaaccaatgaagtggctgatgttgatcgaagttctagtgat |
298 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30880738 |
acatcctagatgatgatcaacatctggctttggcaaaatagtctttaacaggaaaatcaaccaatgaagtggctgatgttgatcgaagttctagtgat |
30880641 |
T |
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