View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14297_low_42 (Length: 239)
Name: NF14297_low_42
Description: NF14297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14297_low_42 |
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Alignment Details
Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 9468618 - 9468396
Alignment:
| Q |
1 |
aatttgtaaactttgttttcctgataaaatgacaagatctcaaatttaggtgtgctgcctattattatagctatgatttctaacttttgatacttattgg |
100 |
Q |
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| T |
9468618 |
aatttgtaaactttgttttcctgataaaatgacaagatctcaaatttaggtgtgctgcctattattatagctatgatttctaacttttgatatttattgg |
9468519 |
T |
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| Q |
101 |
gaactttatagcactatttacaaagtatactagaaaactgaaattagtgacaataatttaggtaggagcgttgtaaaatttgcaactcaaattttagatg |
200 |
Q |
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| T |
9468518 |
gaactttataacactatttacaaagtatactagaaaactaaaattagtgagaataatttagagaggagcgttggaaaatatgcaactcaaattttagatg |
9468419 |
T |
|
| Q |
201 |
tcaagtgtctatgaggttcagtt |
223 |
Q |
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|||||||||||| |||||||||| |
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| T |
9468418 |
tcaagtgtctataaggttcagtt |
9468396 |
T |
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