View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14298_low_7 (Length: 238)
Name: NF14298_low_7
Description: NF14298
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14298_low_7 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 58 - 238
Target Start/End: Complemental strand, 24058977 - 24058798
Alignment:
| Q |
58 |
gtactgtggtatcaaagagagataatttctcaaaaagaaaattgagaaannnnnnnnnaaagtttgattgatttatttttccctctccacctcaaat-aa |
156 |
Q |
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| T |
24058977 |
gtactgtggtatcaaagaga--taatttctcaaaaagaaaattgagaaatttttctttaaagtttgatttatttatttttccctctccacctcaaatcaa |
24058880 |
T |
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| Q |
157 |
gattttagttgaatgcaatttccttttccaattacttcatagcttcagttcaccattcaattcatttggcttcaagaacagc |
238 |
Q |
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| T |
24058879 |
gattttagttgaatgcaatttccttttccaattacttcatagcttcagttaaccattcaattcatttggcttcaagaacagc |
24058798 |
T |
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