View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14299_high_11 (Length: 258)

Name: NF14299_high_11
Description: NF14299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14299_high_11
NF14299_high_11
[»] chr3 (32 HSPs)
chr3 (51-248)||(48712892-48713089)
chr3 (4-53)||(996356-996405)
chr3 (4-52)||(12734111-12734159)
chr3 (4-56)||(19253710-19253762)
chr3 (4-51)||(3206467-3206514)
chr3 (4-59)||(33808073-33808128)
chr3 (7-52)||(20498097-20498142)
chr3 (6-51)||(22057651-22057696)
chr3 (4-52)||(16010750-16010798)
chr3 (4-56)||(51699750-51699802)
chr3 (4-55)||(10139417-10139468)
chr3 (4-51)||(33996762-33996809)
chr3 (4-53)||(29449131-29449180)
chr3 (4-52)||(40246731-40246779)
chr3 (6-53)||(6589449-6589496)
chr3 (8-47)||(29029898-29029937)
chr3 (4-53)||(35337620-35337670)
chr3 (4-50)||(37820748-37820794)
chr3 (7-56)||(15494005-15494054)
chr3 (4-57)||(25418248-25418301)
chr3 (4-48)||(27899277-27899321)
chr3 (7-47)||(48379050-48379090)
chr3 (4-51)||(52114418-52114465)
chr3 (4-50)||(54625481-54625527)
chr3 (4-53)||(19552186-19552235)
chr3 (7-52)||(23753660-23753705)
chr3 (6-55)||(26006023-26006072)
chr3 (7-58)||(36674404-36674456)
chr3 (7-55)||(39842703-39842751)
chr3 (7-51)||(45926990-45927034)
chr3 (6-50)||(50900487-50900531)
chr3 (15-51)||(52079881-52079917)
[»] chr5 (11 HSPs)
chr5 (4-63)||(7016967-7017026)
chr5 (4-52)||(21146955-21147003)
chr5 (6-52)||(43319134-43319180)
chr5 (4-50)||(27459219-27459265)
chr5 (1-50)||(6460682-6460731)
chr5 (4-49)||(16894129-16894174)
chr5 (4-48)||(5273232-5273276)
chr5 (4-58)||(33656313-33656368)
chr5 (4-53)||(32158169-32158218)
chr5 (4-47)||(7948587-7948630)
chr5 (7-48)||(9689553-9689594)
[»] chr4 (28 HSPs)
chr4 (4-58)||(22201896-22201950)
chr4 (4-58)||(30009948-30010002)
chr4 (6-56)||(42786650-42786700)
chr4 (4-53)||(25331017-25331066)
chr4 (4-57)||(41320632-41320685)
chr4 (4-50)||(24131243-24131289)
chr4 (4-52)||(1044697-1044745)
chr4 (4-50)||(7250044-7250090)
chr4 (4-50)||(28541587-28541633)
chr4 (6-52)||(41881357-41881403)
chr4 (8-53)||(40537420-40537465)
chr4 (4-49)||(46635914-46635959)
chr4 (1-57)||(28847137-28847193)
chr4 (4-48)||(31314999-31315043)
chr4 (1-41)||(32951104-32951144)
chr4 (7-46)||(44775947-44775986)
chr4 (7-52)||(37915672-37915717)
chr4 (4-53)||(39479628-39479677)
chr4 (1-50)||(55302732-55302781)
chr4 (6-49)||(1112784-1112825)
chr4 (6-50)||(49469210-49469254)
chr4 (168-227)||(25893708-25893767)
chr4 (6-57)||(25935779-25935830)
chr4 (4-50)||(25445983-25446028)
chr4 (4-50)||(37046723-37046769)
chr4 (1-50)||(7007262-7007311)
chr4 (7-52)||(19741181-19741226)
chr4 (1-50)||(27454358-27454407)
[»] chr1 (26 HSPs)
chr1 (6-56)||(6304527-6304577)
chr1 (4-52)||(22183251-22183299)
chr1 (4-56)||(28824643-28824695)
chr1 (4-55)||(953697-953748)
chr1 (4-52)||(19452121-19452169)
chr1 (6-52)||(730030-730076)
chr1 (4-52)||(21222029-21222077)
chr1 (4-56)||(28541381-28541433)
chr1 (4-52)||(45760281-45760329)
chr1 (4-51)||(35279554-35279601)
chr1 (4-51)||(49198538-49198585)
chr1 (6-48)||(47654627-47654669)
chr1 (1-50)||(35679396-35679445)
chr1 (4-53)||(49417964-49418013)
chr1 (4-52)||(33025393-33025441)
chr1 (4-52)||(50192822-50192870)
chr1 (4-52)||(14494093-14494138)
chr1 (4-50)||(47780502-47780548)
chr1 (7-45)||(48524208-48524246)
chr1 (7-59)||(6312447-6312500)
chr1 (7-56)||(9577706-9577755)
chr1 (2-35)||(29556006-29556039)
chr1 (5-50)||(34772311-34772356)
chr1 (1-49)||(14555346-14555394)
chr1 (4-40)||(31572434-31572470)
chr1 (7-55)||(45272465-45272513)
[»] chr6 (7 HSPs)
chr6 (4-57)||(2301008-2301061)
chr6 (4-50)||(1391513-1391559)
chr6 (4-52)||(6197748-6197796)
chr6 (6-52)||(29076484-29076530)
chr6 (6-52)||(29111457-29111503)
chr6 (4-56)||(7051728-7051780)
chr6 (7-55)||(34759284-34759332)
[»] chr8 (17 HSPs)
chr8 (4-52)||(24502041-24502089)
chr8 (4-51)||(24214861-24214908)
chr8 (4-53)||(23115438-23115487)
chr8 (4-52)||(42735547-42735595)
chr8 (4-55)||(7507169-7507220)
chr8 (4-52)||(2705089-2705137)
chr8 (6-66)||(8543393-8543453)
chr8 (4-52)||(26374698-26374746)
chr8 (4-48)||(41478989-41479033)
chr8 (4-50)||(42937250-42937296)
chr8 (6-55)||(5576893-5576942)
chr8 (4-52)||(26373692-26373741)
chr8 (6-59)||(29260316-29260369)
chr8 (4-51)||(32711552-32711599)
chr8 (6-48)||(43959549-43959591)
chr8 (6-55)||(1606053-1606102)
chr8 (7-47)||(39190044-39190084)
[»] chr7 (25 HSPs)
chr7 (4-56)||(8078280-8078332)
chr7 (4-58)||(31401579-31401633)
chr7 (4-53)||(44343666-44343715)
chr7 (4-52)||(30440685-30440733)
chr7 (4-50)||(43581360-43581406)
chr7 (4-53)||(34008903-34008952)
chr7 (4-53)||(34695119-34695168)
chr7 (4-56)||(18915005-18915057)
chr7 (4-48)||(20275533-20275577)
chr7 (6-49)||(32143192-32143235)
chr7 (1-50)||(47879059-47879108)
chr7 (1-50)||(47914157-47914206)
chr7 (4-48)||(727405-727449)
chr7 (6-50)||(973074-973118)
chr7 (4-47)||(7719531-7719574)
chr7 (6-53)||(40996922-40996969)
chr7 (6-59)||(7113335-7113391)
chr7 (4-54)||(9179763-9179813)
chr7 (6-52)||(12893297-12893343)
chr7 (4-50)||(31638766-31638812)
chr7 (4-50)||(39219605-39219651)
chr7 (6-47)||(43679363-43679404)
chr7 (7-53)||(7993023-7993069)
chr7 (7-47)||(9882509-9882549)
chr7 (7-55)||(29615037-29615085)
[»] chr2 (22 HSPs)
chr2 (4-60)||(9120049-9120105)
chr2 (4-54)||(31170897-31170947)
chr2 (4-53)||(26601473-26601522)
chr2 (4-56)||(22552036-22552088)
chr2 (4-52)||(24776244-24776292)
chr2 (4-51)||(16269581-16269628)
chr2 (6-56)||(305742-305792)
chr2 (4-53)||(12407268-12407317)
chr2 (4-49)||(14198849-14198894)
chr2 (4-49)||(44765667-44765712)
chr2 (7-51)||(20605042-20605086)
chr2 (4-52)||(1789331-1789379)
chr2 (4-56)||(35316947-35316999)
chr2 (4-51)||(14920619-14920666)
chr2 (7-52)||(378868-378913)
chr2 (11-46)||(5093317-5093352)
chr2 (4-51)||(43847536-43847583)
chr2 (7-57)||(28844439-28844489)
chr2 (1-39)||(32125152-32125190)
chr2 (4-53)||(19144912-19144961)
chr2 (7-52)||(33135512-33135557)
chr2 (187-231)||(41725924-41725968)
[»] scaffold0113 (1 HSPs)
scaffold0113 (4-58)||(39124-39178)
[»] scaffold0037 (1 HSPs)
scaffold0037 (4-53)||(100098-100147)
[»] scaffold0004 (1 HSPs)
scaffold0004 (4-50)||(102026-102072)
[»] scaffold0651 (1 HSPs)
scaffold0651 (4-48)||(8654-8698)
[»] scaffold0151 (1 HSPs)
scaffold0151 (4-50)||(38791-38837)
[»] scaffold0922 (1 HSPs)
scaffold0922 (7-56)||(4083-4133)
[»] scaffold0400 (1 HSPs)
scaffold0400 (4-52)||(15304-15349)
[»] scaffold0365 (1 HSPs)
scaffold0365 (4-52)||(15947-15992)
[»] scaffold0016 (1 HSPs)
scaffold0016 (6-52)||(81822-81868)
[»] scaffold0472 (1 HSPs)
scaffold0472 (1-53)||(1920-1972)


Alignment Details
Target: chr3 (Bit Score: 186; Significance: 1e-101; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 51 - 248
Target Start/End: Complemental strand, 48713089 - 48712892
Alignment:
Q  51 cctaaatttcgtaggctaattagtccatgatgagtttacattgacgcaggataacatacaatgtggcatgttcaattaacgcaccacgtcataatttcta 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48713089 cctaaatttcgtaggctaattagtccatgatgagtttacattgacgcaggataacatacaatgcggcatgttcaattaacgcaccacgtcataatttcta 48712990  T
Q  151 acatcaaattttgacggagggaccattttgaattacattttacaatttcatgaatgtatttgtcaattcacaaaaatcaaaaactttcttgacctatg 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  48712989 acatcaaattttgacggagggaccattttgaattacattttacaatttcatgaatgtatttgtcaattcacaaaaatcagaaacttttttgacctatg 48712892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 996356 - 996405
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccct 53  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  996356 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccct 996405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 12734111 - 12734159
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12734111 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccc 12734159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 19253762 - 19253710
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaa 56  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  19253762 ataaaaaagtcttttaaaatcccttagaatcatgatccaataaaccccctaaa 19253710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 3206467 - 3206514
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacacccc 51  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  3206467 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 3206514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 33808073 - 33808128
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaattt 59  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||    
T  33808073 ataaaaaagtcttttaaaatcccttagaatcatgattcaatacaccccctacattt 33808128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 20498142 - 20498097
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  20498142 aaaaagtcttttaaaatcccttagaatcatgatccaatacaccccc 20498097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 22057696 - 22057651
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacacccc 51  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  22057696 aaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 22057651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 16010798 - 16010750
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  16010798 ataaaaaagtcttttaaaatcccttagaattatgatccaatacaccccc 16010750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 51699750 - 51699802
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaa 56  Q
    |||||||| |||||||||||| |||| ||||||||||||||||||||||||||    
T  51699750 ataaaaaaatcttttaaaatcttttataatcatgatccaatacaccccctaaa 51699802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 10139417 - 10139468
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaa 55  Q
    |||||||||| ||||||||||| ||||||||||||| |||||||||||||||    
T  10139417 ataaaaaagtattttaaaatcccttagaatcatgattcaatacaccccctaa 10139468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 33996762 - 33996809
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacacccc 51  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  33996762 ataaaaaagtctttcaaaatcccttagaatcatgatccaatacacccc 33996809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 29449131 - 29449180
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccct 53  Q
    |||||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  29449131 ataaaaaagtcttttaaaatcccttataatcatgatctaatacaccccct 29449180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 40246779 - 40246731
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  40246779 ataaaaaagttttttaaaatctcttagaatcatgatccaatacaccccc 40246731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 6589496 - 6589449
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccct 53  Q
    |||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  6589496 aaaaaagtcttttaaagtcccttagaatcatgatccaatacatcccct 6589449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 29029937 - 29029898
Alignment:
Q  8 aaaagtcttttaaaatcctttagaatcatgatccaataca 47  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  29029937 aaaagtcttttaaaatcccttagaatcatgatccaataca 29029898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 35337670 - 35337620
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatga-tccaatacaccccct 53  Q
    |||||||||||||||||||||| |||||||||||| || ||||||||||||    
T  35337670 ataaaaaagtcttttaaaatcccttagaatcatgattcaaatacaccccct 35337620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 37820748 - 37820794
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    |||||||||||||||||||||| |||||||||| |||||||| ||||    
T  37820748 ataaaaaagtcttttaaaatcccttagaatcattatccaatataccc 37820794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 15494005 - 15494054
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaa 56  Q
    ||||||||||||||||||| ||||||| || |||||||||| ||||||||    
T  15494005 aaaaagtcttttaaaatcccttagaattataatccaatacatcccctaaa 15494054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 25418301 - 25418248
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaat 57  Q
    |||||||| | ||||||||||  ||||||||||||||||||| |||||||||||    
T  25418301 ataaaaaaattttttaaaatctcttagaatcatgatccaataaaccccctaaat 25418248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 27899321 - 27899277
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacac 48  Q
    ||||||||||||||||||||| ||||||||||| ||| |||||||    
T  27899321 ataaaaaagtcttttaaaatcatttagaatcataatctaatacac 27899277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 48379090 - 48379050
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaataca 47  Q
    |||||||||||||||||||| ||||||||| ||||||||||    
T  48379090 aaaaagtcttttaaaatcctatagaatcataatccaataca 48379050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 52114465 - 52114418
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacacccc 51  Q
    |||||||| ||||||||||| | |||||||||||||||| ||||||||    
T  52114465 ataaaaaaatcttttaaaattccttagaatcatgatccagtacacccc 52114418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 54625527 - 54625481
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    |||||||| |||| |||||||  ||||||||||||||||||||||||    
T  54625527 ataaaaaaatcttctaaaatctcttagaatcatgatccaatacaccc 54625481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 19552186 - 19552235
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccct 53  Q
    |||||||| ||||||||||||||||| ||||   ||||||||||||||||    
T  19552186 ataaaaaaatcttttaaaatcctttaaaatctcaatccaatacaccccct 19552235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 23753660 - 23753705
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||||| ||||||| | |||||||||| ||||    
T  23753660 aaaaagtcttttaaaatcctatagaatcctaatccaatacatcccc 23753705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 26006023 - 26006072
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaa 55  Q
    |||||||||||||||||||||||  ||||   ||||||||||||||||||    
T  26006023 aaaaaagtcttttaaaatcctttgaaatctcaatccaatacaccccctaa 26006072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 36674404 - 36674456
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaataca-ccccctaaatt 58  Q
    |||||||||||||||||||  ||||||| | |||||||||| |||||||||||    
T  36674404 aaaaagtcttttaaaatcccatagaatcctaatccaatacatccccctaaatt 36674456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 39842703 - 39842751
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaa 55  Q
    |||||||||||||||||||  ||||||| | |||||||||| |||||||    
T  39842703 aaaaagtcttttaaaatcccatagaatcctaatccaatacatcccctaa 39842751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 45926990 - 45927034
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaatacacccc 51  Q
    ||||||||||||||||||||||| ||||   ||||||||||||||    
T  45926990 aaaaagtcttttaaaatcctttaaaatctcaatccaatacacccc 45927034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 50900487 - 50900531
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    |||||||||||||||||||||||  |||| | |||||||||||||    
T  50900487 aaaaaagtcttttaaaatcctttgaaatcttaatccaatacaccc 50900531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 52079917 - 52079881
Alignment:
Q  15 ttttaaaatcctttagaatcatgatccaatacacccc 51  Q
    ||||||||||  |||||||||||||||||||||||||    
T  52079917 ttttaaaatcacttagaatcatgatccaatacacccc 52079881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 7e-21; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 7016967 - 7017026
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaatttcgta 63  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  7016967 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccctaaattgcgta 7017026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 21147003 - 21146955
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21147003 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccc 21146955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 43319180 - 43319134
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  43319180 aaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccc 43319134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 27459219 - 27459265
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  27459219 ataaaaaagttttttaaaatccgttagaatcatgatccaatacaccc 27459265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6460731 - 6460682
Alignment:
Q  1 attataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  6460731 attataaaaaaatcttttaaaatcccttagaatcatgattcaatacaccc 6460682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 16894129 - 16894174
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacacc 49  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  16894129 ataaaaaagtcttttaaaatcccttagaattatgatccaatacacc 16894174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 5273232 - 5273276
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacac 48  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||    
T  5273232 ataaaaaagtcttttaaaatcccttaaaatcatgatccaatacac 5273276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 33656313 - 33656368
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc-cctaaatt 58  Q
    |||||||| ||||||||||||| ||| |||||||||||||||||||| ||||||||    
T  33656313 ataaaaaaatcttttaaaatcccttaaaatcatgatccaatacaccctcctaaatt 33656368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 32158169 - 32158218
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccct 53  Q
    |||||||||||||||||||| | ||||||||||||| ||||| |||||||    
T  32158169 ataaaaaagtcttttaaaattccttagaatcatgattcaatataccccct 32158218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 7948587 - 7948630
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaataca 47  Q
    ||||||||||||||||||||||| ||||||| | ||||||||||    
T  7948587 ataaaaaagtcttttaaaatcctatagaatcctaatccaataca 7948630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 9689594 - 9689553
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaatacac 48  Q
    ||||||||| ||||||||| |||||||||| |||||||||||    
T  9689594 aaaaagtctattaaaatcccttagaatcataatccaatacac 9689553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 22201950 - 22201896
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaatt 58  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22201950 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccctaaatt 22201896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 30009948 - 30010002
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaatt 58  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  30009948 ataaaaatgtcttttaaaatcccttagaatcatgatccaatacaccccctaaatt 30010002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 42786700 - 42786650
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaa 56  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42786700 aaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccctaaa 42786650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 25331066 - 25331017
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccct 53  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25331066 ataaaaaagtcttttaaaatcttttagaatcatgatccaatacaccccct 25331017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 41320685 - 41320632
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaat 57  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  41320685 ataaaaaaatcttttaaaatcttttagaatcatgatccaatacaccccctaaat 41320632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 24131243 - 24131289
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  24131243 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccc 24131289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 1044745 - 1044697
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  1044745 ataaaaaaatcttttaaaatcccttagaatcatgatccaatacaccccc 1044697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 7250044 - 7250090
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||    
T  7250044 ataaaaaagtcttttaaaattccttagaatcatgatccaatacaccc 7250090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 28541633 - 28541587
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||    
T  28541633 ataaaaatgtcttttaaaatcccttagaatcatgatccaatacaccc 28541587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 41881357 - 41881403
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  41881357 aaaaaagtcttttaaaatcccttaaaatcatgatccaatacaccccc 41881403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 40537420 - 40537465
Alignment:
Q  8 aaaagtcttttaaaatcctttagaatcatgatccaatacaccccct 53  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||    
T  40537420 aaaagtcttttaaaatcccttacaatcatgatccaatacaccccct 40537465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 46635914 - 46635959
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacacc 49  Q
    |||||||||||||||||||||  |||||||||||||||||||||||    
T  46635914 ataaaaaagtcttttaaaatctcttagaatcatgatccaatacacc 46635959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 28847137 - 28847193
Alignment:
Q  1 attataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaat 57  Q
    ||||||||||||||||||||||||||||| ||||   |||||||||| |||||||||    
T  28847137 attataaaaaagtcttttaaaatcctttaaaatctcaatccaatacatcccctaaat 28847193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 31314999 - 31315043
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacac 48  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||    
T  31314999 ataaaaaaatcttttaaaatcccttagaatcatgatccaatacac 31315043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32951104 - 32951144
Alignment:
Q  1 attataaaaaagtcttttaaaatcctttagaatcatgatcc 41  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  32951104 attataaaaaagtcttttaaaatcccttagaatcatgatcc 32951144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 44775947 - 44775986
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaatac 46  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  44775947 aaaaagtcttttaaaatccattagaatcatgatccaatac 44775986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 37915717 - 37915672
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||    
T  37915717 aaaaagtcttttaaaatcccatagaatcataatccaatacaccccc 37915672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 39479628 - 39479677
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccct 53  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||    
T  39479628 ataaaaaagtcttttaaaatttcttaaaatcatgatccaatacaccccct 39479677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 55302781 - 55302732
Alignment:
Q  1 attataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    |||||||||||||||| |||||||| ||| ||||||||| ||||||||||    
T  55302781 attataaaaaagtcttctaaaatcccttaaaatcatgattcaatacaccc 55302732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 1112825 - 1112784
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacacc 49  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  1112825 aaaaaagtcttttaaaatc--ttagaatcatgatccaatacacc 1112784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 49469254 - 49469210
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    |||||||||||||||||| | || |||||||||||||||||||||    
T  49469254 aaaaaagtcttttaaaattccttggaatcatgatccaatacaccc 49469210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 25893767 - 25893708
Alignment:
Q  168 agggaccattttgaattacattttacaatttcatgaatgtatttgtcaattcacaaaaat 227  Q
    |||||| ||||||||  |||||||||||||||||| |||||||| ||||||  |||||||    
T  25893767 agggactattttgaacaacattttacaatttcatggatgtatttatcaatttgcaaaaat 25893708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 25935830 - 25935779
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaat 57  Q
    |||||||||||||||||||||||  ||||   ||||||||||||||||||||    
T  25935830 aaaaaagtcttttaaaatcctttgaaatctcaatccaatacaccccctaaat 25935779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 25446028 - 25445983
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    |||||||||||||||||||||| ||| |||||| |||||||||||||    
T  25446028 ataaaaaagtcttttaaaatcccttaaaatcat-atccaatacaccc 25445983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 37046723 - 37046769
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    |||||||  ||||||||||| | ||||||||||||||||||||||||    
T  37046723 ataaaaatatcttttaaaattccttagaatcatgatccaatacaccc 37046769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7007311 - 7007262
Alignment:
Q  1 attataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    ||||||||||||||| ||||||||| ||| ||||||||| |||| |||||    
T  7007311 attataaaaaagtctattaaaatcccttaaaatcatgattcaatccaccc 7007262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 19741181 - 19741226
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||| ||||||||||||||  |||||| ||||    
T  19741181 aaaaagtcttttaaaatcttttagaatcatgattgaatacatcccc 19741226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27454358 - 27454407
Alignment:
Q  1 attataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    ||||||||| ||||||||||||| | ||| ||||||||||||||| ||||    
T  27454358 attataaaacagtcttttaaaattccttaaaatcatgatccaatataccc 27454407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 6304527 - 6304577
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaa 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6304527 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaa 6304577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 22183299 - 22183251
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22183299 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 22183251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 28824643 - 28824695
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaa 56  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28824643 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccctaaa 28824695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 953748 - 953697
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaa 55  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  953748 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccctaa 953697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 19452121 - 19452169
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19452121 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccc 19452169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 730076 - 730030
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  730076 aaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccc 730030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 21222077 - 21222029
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  21222077 ataaaaaagccttttaaaatcccttagaatcatgatccaatacaccccc 21222029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 28541433 - 28541381
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaa 56  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||||||||||    
T  28541433 ataaaaaaatcttttaaaatcgcttagaatcatgatccaatacaccccctaaa 28541381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 45760281 - 45760329
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  45760281 ataaaaaaatcttttaaaatcccttagaatcatgatccaatacaccccc 45760329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 35279601 - 35279554
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacacccc 51  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||    
T  35279601 ataaaaaagtcttttaaaatctcttagaatcatgatccaatacacccc 35279554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 49198538 - 49198585
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacacccc 51  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||    
T  49198538 ataaaaaagtcttttaaaattccttagaatcatgatccaatacacccc 49198585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 47654627 - 47654669
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacac 48  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  47654627 aaaaaagtcttttaaaatcccttagaatcatgatccaatacac 47654669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 35679396 - 35679445
Alignment:
Q  1 attataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  35679396 attataaaaaagtcttttaaaatcccttaaaatcatgattcaatacaccc 35679445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 49418013 - 49417964
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccct 53  Q
    |||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  49418013 ataaaaaagtcttttaaaatctcttagaatcatgatccaatataccccct 49417964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 33025441 - 33025393
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  33025441 ataaaaaagtcttttaaattctcttagaatcatgatccaatacaccccc 33025393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 50192822 - 50192870
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||||| | ||||||||||||| ||||||||||||    
T  50192822 ataaaaaagtcttttaaaattccttagaatcatgattcaatacaccccc 50192870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 14494138 - 14494093
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||   || ||||||||||||||||||||||||||    
T  14494138 ataaaaaagtcttttaa---cccttagaatcatgatccaatacaccccc 14494093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 47780548 - 47780502
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    |||||||| |||||||||||   ||||||||||||||||||||||||    
T  47780548 ataaaaaaatcttttaaaatttcttagaatcatgatccaatacaccc 47780502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 48524246 - 48524208
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaata 45  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  48524246 aaaaagtcttttaaaattccttagaatcatgatccaata 48524208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 6312500 - 6312447
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaataca-ccccctaaattt 59  Q
    |||||||||||||||||||  ||||||| | |||||||||| ||||||||||||    
T  6312500 aaaaagtcttttaaaatcccatagaatcctaatccaatacatccccctaaattt 6312447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 9577706 - 9577755
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaa 56  Q
    ||||||||||||||||||| || ||||| | |||||||||| ||||||||    
T  9577706 aaaaagtcttttaaaatcccttcgaatcctaatccaatacatcccctaaa 9577755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 29556039 - 29556006
Alignment:
Q  2 ttataaaaaagtcttttaaaatcctttagaatca 35  Q
    |||||||||||||||||||||||| |||||||||    
T  29556039 ttataaaaaagtcttttaaaatcccttagaatca 29556006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 34772356 - 34772311
Alignment:
Q  5 taaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    ||||||||||||||||||||||||  |||||  |||||||||||||    
T  34772356 taaaaaagtcttttaaaatcctttgaaatcacaatccaatacaccc 34772311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14555346 - 14555394
Alignment:
Q  1 attataaaaaagtcttttaaaatcctttagaatcatgatccaatacacc 49  Q
    ||||||||||||||||||||||||||||  ||| |  ||||||||||||    
T  14555346 attataaaaaagtcttttaaaatccttttaaattacaatccaatacacc 14555394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 31572434 - 31572470
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatc 40  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  31572434 ataaaaaagtctcttaaaatcccttagaatcatgatc 31572470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 45272513 - 45272465
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaa 55  Q
    |||||||||||||||||||  ||||||| | |||||||||| |||||||    
T  45272513 aaaaagtcttttaaaatcccatagaatcttaatccaatacatcccctaa 45272465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 2301008 - 2301061
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaat 57  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2301008 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccctaaat 2301061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 1391559 - 1391513
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  1391559 ataaaaaagtcatttaaaatcctttagaatcatgatccaatacaccc 1391513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 6197748 - 6197796
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  6197748 ataaaaaagttttttaaaatcccttagaatcatgatccaatacaccccc 6197796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 29076530 - 29076484
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||    
T  29076530 aaaaaagtcttttaaaatctcttagaatcatgatccaatacaccccc 29076484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 29111503 - 29111457
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||    
T  29111503 aaaaaagtcttttaaaatctcttagaatcatgatccaatacaccccc 29111457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 7051780 - 7051728
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaa 56  Q
    |||||||||||||||||||||  |||||||| | ||| || ||||||||||||    
T  7051780 ataaaaaagtcttttaaaatctcttagaatcctaatcaaacacaccccctaaa 7051728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 34759284 - 34759332
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaa 55  Q
    ||||||||||||||||||   ||||||| | ||||||||||||||||||    
T  34759284 aaaaagtcttttaaaatctcatagaatcctaatccaatacaccccctaa 34759332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 24502041 - 24502089
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24502041 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 24502089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 24214861 - 24214908
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacacccc 51  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24214861 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacacccc 24214908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 23115438 - 23115487
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccct 53  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23115438 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccct 23115487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 42735547 - 42735595
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42735547 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccc 42735595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 7507169 - 7507220
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaa 55  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  7507169 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccctctaa 7507220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 2705089 - 2705137
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  2705089 ataaaaaaatcttttaaaatcctttacaatcatgatccaatacaccccc 2705137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 8543453 - 8543393
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaatttcgtaggc 66  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||||| || |||||||||    
T  8543453 aaaaaaatcttttaaaatcccttagaatcatgatctaatacacccccttaagttcgtaggc 8543393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 26374698 - 26374746
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  26374698 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacatcccc 26374746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 41479033 - 41478989
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacac 48  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  41479033 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacac 41478989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 42937296 - 42937250
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  42937296 ataaaaaagtcttttaaaatcccttaaaatcatgatccaatacaccc 42937250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 5576893 - 5576942
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaa 55  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||||||    
T  5576893 aaaaaaatcttttaaaatcccttagaatcataatccaatacaccccctaa 5576942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 26373741 - 26373692
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgat-ccaatacaccccc 52  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  26373741 ataaaaaagtcttttaaaatcccttagaatcatgatcccaatacaccccc 26373692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 29260316 - 29260369
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaattt 59  Q
    |||||||||||||||||||||||| ||||   ||||||||||||||||||||||    
T  29260316 aaaaaagtcttttaaaatcctttaaaatctcaatccaatacaccccctaaattt 29260369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 32711552 - 32711599
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacacccc 51  Q
    |||||||||||||||||| ||  |||||||||||||||||||||||||    
T  32711552 ataaaaaagtcttttaaagtctcttagaatcatgatccaatacacccc 32711599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 43959591 - 43959549
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacac 48  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  43959591 aaaaaagtcttttaaaatcctttaaaatcatgatcaaatacac 43959549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 1606053 - 1606102
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaa 55  Q
    |||||||||||||||||||||||  ||||   ||||||||||||||||||    
T  1606053 aaaaaagtcttttaaaatcctttgaaatctcaatccaatacaccccctaa 1606102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 39190044 - 39190084
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaataca 47  Q
    ||||||||||||||||||| |||||||| | ||||||||||    
T  39190044 aaaaagtcttttaaaatcccttagaatcctaatccaataca 39190084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 8078332 - 8078280
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaa 56  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8078332 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccctaaa 8078280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 31401633 - 31401579
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaatt 58  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  31401633 ataaaaaagtcttttaaagttctttagaatcatgatccaatacaccccctaaatt 31401579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 44343666 - 44343715
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccct 53  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44343666 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccct 44343715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 30440733 - 30440685
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30440733 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccc 30440685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 43581360 - 43581406
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  43581360 ataaaaaagtcttttaaaattctttagaatcatgatccaatacaccc 43581406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 34008952 - 34008903
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccct 53  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  34008952 ataaaaaaatcttttaaaatcccttagaatcatgatccaatacaccccct 34008903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 34695168 - 34695119
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccct 53  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  34695168 ataaaaaagtcttttaaaatcccttagaatcatgattcaatacaccccct 34695119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 18915005 - 18915057
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaa 56  Q
    |||||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  18915005 ataaaaaagtcttttaaaatcccttagatacatgatccaatacaccccctaaa 18915057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 20275533 - 20275577
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacac 48  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  20275533 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacac 20275577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 32143192 - 32143235
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacacc 49  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  32143192 aaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 32143235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 47879108 - 47879059
Alignment:
Q  1 attataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  47879108 attataaataagtcttttaaaatcccttagaatcatgattcaatacaccc 47879059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 47914206 - 47914157
Alignment:
Q  1 attataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  47914206 attataaataagtcttttaaaatcccttagaatcatgattcaatacaccc 47914157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 727449 - 727405
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacac 48  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||    
T  727449 ataaaaaagtcatttaaaatccattagaatcatgatccaatacac 727405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 973118 - 973074
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||    
T  973118 aaaaaaatcttttaaaatcccttagaatcatgatccaatacaccc 973074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 7719531 - 7719574
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaataca 47  Q
    ||||||||||||||||||||| |||| |||||||||||||||||    
T  7719531 ataaaaaagtcttttaaaatcttttacaatcatgatccaataca 7719574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 40996922 - 40996969
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccct 53  Q
    |||||| | ||||||||||| |||||||||||||||||||||||||||    
T  40996922 aaaaaaatattttaaaatcccttagaatcatgatccaatacaccccct 40996969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 7113391 - 7113335
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatca---tgatccaatacaccccctaaattt 59  Q
    |||||||||||||||||||| |||||||||   |||||||||||||||||| |||||    
T  7113391 aaaaaagtcttttaaaatcccttagaatcatgatgatccaatacacccccttaattt 7113335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 9179813 - 9179763
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacacccccta 54  Q
    ||||||||||||||||||||| ||||||||  | |||||||||||||||||    
T  9179813 ataaaaaagtcttttaaaatcttttagaatgctaatccaatacacccccta 9179763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 12893343 - 12893297
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||| ||||||||||| | ||||||||||||||||||||||||||    
T  12893343 aaaaaaatcttttaaaataccttagaatcatgatccaatacaccccc 12893297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 31638812 - 31638766
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    |||||||||||||||||||||  ||||||||||||| ||||||||||    
T  31638812 ataaaaaagtcttttaaaatctcttagaatcatgattcaatacaccc 31638766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 39219605 - 39219651
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||||    
T  39219605 ataaaaaagtcttttaaaattccttagaattatgatccaatacaccc 39219651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 43679404 - 43679363
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaataca 47  Q
    |||||| ||||||||||||| |||||||||||||||||||||    
T  43679404 aaaaaaatcttttaaaatcccttagaatcatgatccaataca 43679363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 7993069 - 7993023
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaatacaccccct 53  Q
    |||||||||||||||||||| ||||||| | |||||||||| |||||    
T  7993069 aaaaagtcttttaaaatcctatagaatcttaatccaatacatcccct 7993023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 9882509 - 9882549
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaataca 47  Q
    |||||||||||||||||||| ||||||| | ||||||||||    
T  9882509 aaaaagtcttttaaaatcctatagaatcctaatccaataca 9882549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 29615037 - 29615085
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaa 55  Q
    ||||||||||||||||||   ||||||||| |||||||||| |||||||    
T  29615037 aaaaagtcttttaaaatctcatagaatcataatccaatacatcccctaa 29615085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 9120105 - 9120049
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaatttc 60  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  9120105 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccccttaatttc 9120049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 31170897 - 31170947
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacacccccta 54  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31170897 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccccta 31170947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 26601473 - 26601522
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccct 53  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26601473 ataaaaaagtcttttaaaatcctttagaaacatgatccaatacaccccct 26601522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 22552036 - 22552088
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaa 56  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  22552036 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccactaaa 22552088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 24776292 - 24776244
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24776292 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccc 24776244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 16269628 - 16269581
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacacccc 51  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  16269628 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 16269581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 305742 - 305792
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaa 56  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  305742 aaaaaagtcttttaaaatcgcttagaatcatgatccaatacaccccctaaa 305792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 12407317 - 12407268
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccct 53  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||    
T  12407317 ataaaaaagtcttttaaaatctcttagaatcatgatccaatacaccccct 12407268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 14198849 - 14198894
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacacc 49  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  14198849 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 14198894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 44765712 - 44765667
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacacc 49  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  44765712 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 44765667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 20605086 - 20605042
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaatacacccc 51  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  20605086 aaaaagtcttttaaaatcccttagaatcatgatccaatacacccc 20605042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 1789379 - 1789331
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||||||    
T  1789379 ataaaaaaatcttttaaaatctcttagaatcatgatccaatacaccccc 1789331  T

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Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 35316999 - 35316947
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaa 56  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||||| ||||    
T  35316999 ataaaaaagttttttaaaatcccttagaatcatgattcaatacaccccttaaa 35316947  T

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Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 14920619 - 14920666
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacacccc 51  Q
    |||||||||||||||||||||||||| |||||  ||||||||||||||    
T  14920619 ataaaaaagtcttttaaaatcctttaaaatcacaatccaatacacccc 14920666  T

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Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 378913 - 378868
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    ||||||||||||||||||| ||| ||||||||||||||||| ||||    
T  378913 aaaaagtcttttaaaatcccttataatcatgatccaatacatcccc 378868  T

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Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 5093317 - 5093352
Alignment:
Q  11 agtcttttaaaatcctttagaatcatgatccaatac 46  Q
    ||||||||||||||| ||||||||||||||||||||    
T  5093317 agtcttttaaaatcccttagaatcatgatccaatac 5093352  T

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Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 43847583 - 43847536
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacacccc 51  Q
    |||||||||||||||||||||| |||||  ||||||| ||||||||||    
T  43847583 ataaaaaagtcttttaaaatcccttagatacatgatctaatacacccc 43847536  T

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Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 28844489 - 28844439
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaat 57  Q
    |||||||||||||||||||  ||||||| | |||||||||| |||||||||    
T  28844489 aaaaagtcttttaaaatcccatagaatcctaatccaatacatcccctaaat 28844439  T

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Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 32125190 - 32125152
Alignment:
Q  1 attataaaaaagtcttttaaaatcctttagaatcatgat 39  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  32125190 attataaaaaagtcttttaaaatcccttaaaatcatgat 32125152  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 19144961 - 19144912
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccct 53  Q
    |||||||| | ||||||||||| ||||||||||  |||||||||||||||    
T  19144961 ataaaaaaatattttaaaatcccttagaatcatattccaatacaccccct 19144912  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 33135557 - 33135512
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||||| ||||||| | |||||||||| ||||    
T  33135557 aaaaagtcttttaaaatcctatagaatcctaatccaatacatcccc 33135512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 41725924 - 41725968
Alignment:
Q  187 attttacaatttcatgaatgtatttgtcaattcacaaaaatcaaa 231  Q
    ||||||||||||||  ||| || ||||||||||||||||||||||    
T  41725924 attttacaatttcacaaatatacttgtcaattcacaaaaatcaaa 41725968  T

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Target: scaffold0113 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 39124 - 39178
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccctaaatt 58  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  39124 ataaaaaagtcttttaaaatccattagaatcatgatccaatacacccccttaatt 39178  T

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Target: scaffold0037 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 100147 - 100098
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccct 53  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  100147 ataaaaaagtcttttaaaatcccttagaatcatgatccaatacaccccct 100098  T

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Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 102072 - 102026
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||    
T  102072 ataaaaaagtcttttaaaatcccttagaatcatgatctaatacaccc 102026  T

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Target: scaffold0651 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 8698 - 8654
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacac 48  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||    
T  8698 ataaaaaaatcttttaaaatcccttagaatcatgatccaatacac 8654  T

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Target: scaffold0151 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 38791 - 38837
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccc 50  Q
    |||||||  ||||||||||||| ||||||||||||||||||||||||    
T  38791 ataaaaatatcttttaaaatcccttagaatcatgatccaatacaccc 38837  T

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Target: scaffold0922 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 4133 - 4083
Alignment:
Q  7 aaaaagtcttttaaaatcctttagaatcatgatccaataca-ccccctaaa 56  Q
    |||||||||||||||||||| ||||||| | |||||||||| |||||||||    
T  4133 aaaaagtcttttaaaatcctatagaatcctaatccaatacatccccctaaa 4083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 15304 - 15349
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||   || ||||||||||||||||||||||||||    
T  15304 ataaaaaagtcttttaa---cccttagaatcatgatccaatacaccccc 15349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 15947 - 15992
Alignment:
Q  4 ataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||   || ||||||||||||||||||||||||||    
T  15947 ataaaaaagtcttttaa---cccttagaatcatgatccaatacaccccc 15992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 81822 - 81868
Alignment:
Q  6 aaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccc 52  Q
    |||||||||||||||||||||||| ||||   |||||||||||||||    
T  81822 aaaaaagtcttttaaaatcctttaaaatctcaatccaatacaccccc 81868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1920 - 1972
Alignment:
Q  1 attataaaaaagtcttttaaaatcctttagaatcatgatccaatacaccccct 53  Q
    ||||| ||||||||||||||||||  ||| |||| |||| |||||||||||||    
T  1920 attattaaaaagtcttttaaaatctcttaaaatcttgattcaatacaccccct 1972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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