View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1429_high_45 (Length: 244)

Name: NF1429_high_45
Description: NF1429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1429_high_45
NF1429_high_45
[»] chr4 (70 HSPs)
chr4 (1-102)||(13139228-13139329)
chr4 (1-106)||(14010003-14010109)
chr4 (1-104)||(31657726-31657830)
chr4 (1-100)||(46405865-46405965)
chr4 (4-102)||(45143562-45143661)
chr4 (4-102)||(45152331-45152430)
chr4 (1-105)||(22819729-22819834)
chr4 (18-104)||(17683438-17683525)
chr4 (1-106)||(2999192-2999298)
chr4 (1-104)||(39344867-39344971)
chr4 (1-102)||(26718448-26718550)
chr4 (1-102)||(26731076-26731178)
chr4 (4-104)||(52846116-52846217)
chr4 (1-104)||(56271440-56271544)
chr4 (1-103)||(13086102-13086205)
chr4 (1-104)||(1815888-1815992)
chr4 (1-104)||(38338809-38338913)
chr4 (4-61)||(27326683-27326740)
chr4 (1-104)||(12138933-12139037)
chr4 (1-104)||(18882862-18882966)
chr4 (1-103)||(42667285-42667389)
chr4 (1-103)||(47099102-47099203)
chr4 (1-99)||(28657333-28657432)
chr4 (1-103)||(43769791-43769894)
chr4 (1-104)||(9362565-9362670)
chr4 (1-104)||(51194349-51194453)
chr4 (2-105)||(38715328-38715433)
chr4 (1-93)||(49896564-49896657)
chr4 (14-105)||(12799807-12799899)
chr4 (1-103)||(33860726-33860830)
chr4 (1-103)||(14451473-14451576)
chr4 (1-103)||(21260378-21260481)
chr4 (1-106)||(32696261-32696367)
chr4 (1-106)||(41486028-41486134)
chr4 (1-96)||(23662211-23662308)
chr4 (16-104)||(47965832-47965921)
chr4 (1-104)||(9118751-9118855)
chr4 (34-104)||(32696675-32696747)
chr4 (1-103)||(42815484-42815588)
chr4 (1-104)||(51887743-51887846)
chr4 (2-62)||(53299268-53299328)
chr4 (1-99)||(33899218-33899317)
chr4 (1-102)||(39312504-39312607)
chr4 (2-98)||(12595523-12595620)
chr4 (1-97)||(37514025-37514123)
chr4 (1-106)||(40609688-40609801)
chr4 (14-98)||(42491167-42491252)
chr4 (1-104)||(3078794-3078899)
chr4 (8-99)||(4949592-4949685)
chr4 (16-104)||(5932045-5932134)
chr4 (1-103)||(21617263-21617366)
chr4 (1-97)||(23853814-23853911)
chr4 (1-104)||(53654636-53654741)
chr4 (36-104)||(54669471-54669540)
chr4 (1-104)||(13104269-13104373)
chr4 (36-103)||(17475991-17476059)
chr4 (1-100)||(21172360-21172460)
chr4 (1-103)||(30079926-30080029)
chr4 (39-104)||(35936083-35936150)
chr4 (37-98)||(50831648-50831711)
chr4 (1-103)||(51746300-51746403)
chr4 (1-103)||(53152209-53152312)
chr4 (1-106)||(53647309-53647416)
chr4 (1-63)||(28458306-28458368)
chr4 (2-103)||(50272961-50273063)
chr4 (1-106)||(51852156-51852261)
chr4 (39-106)||(21025719-21025788)
chr4 (3-98)||(34995403-34995499)
chr4 (4-52)||(1140692-1140740)
chr4 (1-104)||(31076134-31076237)
[»] chr6 (32 HSPs)
chr6 (1-104)||(754325-754429)
chr6 (1-107)||(1369440-1369547)
chr6 (1-104)||(35213448-35213552)
chr6 (1-104)||(32459403-32459507)
chr6 (1-103)||(13143270-13143373)
chr6 (1-105)||(18141187-18141292)
chr6 (1-103)||(2688952-2689056)
chr6 (1-99)||(20822761-20822859)
chr6 (1-99)||(32046778-32046877)
chr6 (1-104)||(6531067-6531174)
chr6 (1-104)||(23628439-23628546)
chr6 (1-104)||(26832726-26832830)
chr6 (14-103)||(3832556-3832646)
chr6 (1-97)||(5028160-5028257)
chr6 (4-95)||(2943517-2943609)
chr6 (1-106)||(11547414-11547520)
chr6 (1-98)||(31749445-31749543)
chr6 (1-99)||(9050213-9050313)
chr6 (1-103)||(28041701-28041805)
chr6 (1-103)||(868840-868943)
chr6 (1-62)||(14699594-14699655)
chr6 (1-99)||(2075343-2075442)
chr6 (1-87)||(29180535-29180623)
chr6 (16-111)||(30036674-30036770)
chr6 (1-52)||(14693192-14693243)
chr6 (1-52)||(24842447-24842498)
chr6 (1-97)||(6856057-6856155)
chr6 (1-105)||(3610847-3610952)
chr6 (16-104)||(5327478-5327567)
chr6 (1-96)||(24980014-24980111)
chr6 (37-95)||(31883199-31883259)
chr6 (1-100)||(34504100-34504200)
[»] chr7 (50 HSPs)
chr7 (1-105)||(43573429-43573534)
chr7 (1-105)||(28036824-28036929)
chr7 (1-103)||(41893995-41894098)
chr7 (1-104)||(11352861-11352965)
chr7 (1-106)||(7817716-7817822)
chr7 (1-104)||(44184446-44184550)
chr7 (1-103)||(13729806-13729909)
chr7 (1-106)||(12645795-12645901)
chr7 (1-102)||(10055521-10055623)
chr7 (4-103)||(34757358-34757459)
chr7 (1-100)||(3343221-3343321)
chr7 (1-99)||(3062410-3062509)
chr7 (1-99)||(21822491-21822590)
chr7 (1-99)||(35588783-35588882)
chr7 (1-96)||(46532582-46532679)
chr7 (1-100)||(42555644-42555744)
chr7 (8-106)||(41458683-41458782)
chr7 (1-62)||(43482603-43482664)
chr7 (1-104)||(19785966-19786070)
chr7 (1-104)||(21023004-21023108)
chr7 (14-92)||(16980389-16980468)
chr7 (1-99)||(25067303-25067402)
chr7 (1-103)||(33180598-33180701)
chr7 (1-104)||(35452459-35452564)
chr7 (1-100)||(42926219-42926320)
chr7 (1-103)||(4713653-4713757)
chr7 (4-103)||(23048288-23048387)
chr7 (1-98)||(6109863-6109962)
chr7 (1-103)||(41399051-41399154)
chr7 (1-81)||(8920577-8920658)
chr7 (1-62)||(31844535-31844596)
chr7 (1-100)||(13162999-13163099)
chr7 (1-103)||(39231616-39231719)
chr7 (1-106)||(13906342-13906448)
chr7 (2-98)||(23679930-23680028)
chr7 (36-104)||(26041207-26041276)
chr7 (1-104)||(32815248-32815352)
chr7 (1-104)||(38779631-38779735)
chr7 (1-88)||(40231609-40231697)
chr7 (1-98)||(4225832-4225931)
chr7 (1-103)||(37808652-37808755)
chr7 (49-98)||(10700079-10700129)
chr7 (1-100)||(11564973-11565072)
chr7 (1-97)||(39029939-39030030)
chr7 (1-93)||(46829559-46829653)
chr7 (1-98)||(47500688-47500786)
chr7 (1-62)||(3293209-3293270)
chr7 (1-62)||(20482607-20482668)
chr7 (1-105)||(40353344-40353449)
chr7 (1-100)||(29162867-29162967)
[»] chr1 (65 HSPs)
chr1 (1-105)||(50328027-50328132)
chr1 (1-103)||(48326048-48326150)
chr1 (1-104)||(32914959-32915063)
chr1 (1-104)||(40316831-40316935)
chr1 (1-103)||(35136924-35137027)
chr1 (1-103)||(52362562-52362665)
chr1 (4-102)||(15015481-15015579)
chr1 (1-103)||(13489742-13489845)
chr1 (6-103)||(15704950-15705048)
chr1 (1-104)||(36577299-36577403)
chr1 (1-100)||(52714792-52714892)
chr1 (1-103)||(10889934-10890037)
chr1 (1-103)||(34254239-34254342)
chr1 (1-105)||(50781456-50781561)
chr1 (1-108)||(33358041-33358149)
chr1 (15-104)||(6143777-6143867)
chr1 (3-104)||(29154860-29154962)
chr1 (1-103)||(8447816-8447919)
chr1 (1-106)||(29147758-29147865)
chr1 (1-105)||(46543329-46543433)
chr1 (1-104)||(50881997-50882101)
chr1 (1-103)||(48220032-48220135)
chr1 (1-99)||(34040390-34040491)
chr1 (1-98)||(41507087-41507185)
chr1 (1-106)||(50824821-50824927)
chr1 (5-103)||(8200159-8200258)
chr1 (1-105)||(19969460-19969553)
chr1 (4-104)||(47215616-47215718)
chr1 (15-104)||(49241395-49241482)
chr1 (1-100)||(11823037-11823138)
chr1 (1-104)||(7128198-7128302)
chr1 (1-100)||(35539164-35539264)
chr1 (1-92)||(45417852-45417944)
chr1 (1-103)||(47721489-47721592)
chr1 (1-103)||(47728481-47728584)
chr1 (1-106)||(52267282-52267389)
chr1 (1-97)||(51436664-51436762)
chr1 (1-105)||(8411604-8411709)
chr1 (2-105)||(11597718-11597822)
chr1 (1-62)||(26967289-26967350)
chr1 (4-68)||(25259166-25259230)
chr1 (1-104)||(48624956-48625059)
chr1 (1-103)||(3603191-3603294)
chr1 (1-103)||(20565006-20565109)
chr1 (37-98)||(51571239-51571302)
chr1 (14-106)||(43769711-43769805)
chr1 (1-62)||(51466847-51466908)
chr1 (29-104)||(9008333-9008409)
chr1 (1-100)||(33024462-33024562)
chr1 (1-104)||(38713650-38713754)
chr1 (4-104)||(44294098-44294195)
chr1 (4-103)||(45383857-45383957)
chr1 (5-103)||(26585767-26585866)
chr1 (1-102)||(50433849-50433952)
chr1 (1-103)||(51191868-51191971)
chr1 (2-103)||(1852839-1852941)
chr1 (68-102)||(4608307-4608341)
chr1 (36-101)||(5486011-5486077)
chr1 (29-106)||(26837560-26837638)
chr1 (39-103)||(43560322-43560388)
chr1 (66-100)||(48263160-48263194)
chr1 (1-97)||(756936-757033)
chr1 (1-62)||(35539289-35539350)
chr1 (1-61)||(18336226-18336286)
chr1 (1-106)||(37588561-37588666)
[»] chr2 (61 HSPs)
chr2 (1-104)||(9634323-9634427)
chr2 (1-104)||(32869906-32870010)
chr2 (1-100)||(2563784-2563884)
chr2 (14-104)||(13765493-13765584)
chr2 (1-103)||(39213658-39213761)
chr2 (1-104)||(6170710-6170814)
chr2 (1-104)||(6998955-6999059)
chr2 (1-104)||(24562904-24563008)
chr2 (1-100)||(39449347-39449447)
chr2 (1-103)||(35589275-35589378)
chr2 (1-100)||(13347705-13347806)
chr2 (4-104)||(23352794-23352895)
chr2 (1-104)||(7574515-7574619)
chr2 (1-102)||(37105718-37105820)
chr2 (1-105)||(40936950-40937055)
chr2 (1-104)||(42678829-42678934)
chr2 (1-106)||(4061847-4061953)
chr2 (1-104)||(15269941-15270045)
chr2 (1-104)||(28245808-28245911)
chr2 (1-106)||(5054688-5054794)
chr2 (4-100)||(22525887-22525984)
chr2 (1-103)||(2221073-2221176)
chr2 (1-103)||(10711804-10711907)
chr2 (19-104)||(3012739-3012825)
chr2 (1-103)||(29712058-29712160)
chr2 (1-106)||(34119537-34119643)
chr2 (38-103)||(36643972-36644038)
chr2 (2-102)||(4023239-4023340)
chr2 (1-97)||(9377536-9377633)
chr2 (1-104)||(18876807-18876912)
chr2 (1-105)||(36211946-36212051)
chr2 (13-99)||(44254693-44254780)
chr2 (1-102)||(25881624-25881726)
chr2 (4-99)||(16677753-16677852)
chr2 (14-105)||(41586554-41586647)
chr2 (13-103)||(11091247-11091338)
chr2 (2-98)||(7663960-7664056)
chr2 (7-99)||(34431721-34431814)
chr2 (1-81)||(12498548-12498627)
chr2 (1-99)||(14233610-14233710)
chr2 (1-104)||(42372560-42372664)
chr2 (8-105)||(11167404-11167503)
chr2 (1-103)||(42866830-42866933)
chr2 (1-104)||(36802976-36803080)
chr2 (2-98)||(42430731-42430828)
chr2 (1-100)||(7648470-7648570)
chr2 (1-104)||(17898120-17898225)
chr2 (1-100)||(18177020-18177120)
chr2 (36-99)||(35705608-35705672)
chr2 (18-104)||(7552654-7552741)
chr2 (2-104)||(29051542-29051645)
chr2 (36-102)||(36517311-36517378)
chr2 (38-99)||(1415930-1415992)
chr2 (1-63)||(4139236-4139298)
chr2 (4-62)||(6895977-6896035)
chr2 (29-105)||(433958-434035)
chr2 (1-62)||(20911881-20911942)
chr2 (1-42)||(30546320-30546361)
chr2 (38-106)||(31389664-31389733)
chr2 (1-104)||(670359-670463)
chr2 (42-98)||(34215385-34215441)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-104)||(12012-12116)
[»] chr5 (39 HSPs)
chr5 (1-104)||(19481069-19481173)
chr5 (1-103)||(8675321-8675424)
chr5 (1-103)||(15478738-15478841)
chr5 (1-105)||(43441818-43441923)
chr5 (1-104)||(189590-189694)
chr5 (1-104)||(10649515-10649619)
chr5 (6-103)||(32912123-32912221)
chr5 (15-103)||(34270421-34270510)
chr5 (1-100)||(15952936-15953036)
chr5 (4-103)||(34124704-34124804)
chr5 (1-104)||(41175593-41175697)
chr5 (1-103)||(18397053-18397156)
chr5 (14-104)||(38704084-38704175)
chr5 (4-105)||(19839872-19839974)
chr5 (1-103)||(43213947-43214050)
chr5 (1-81)||(9581659-9581739)
chr5 (1-104)||(10658991-10659094)
chr5 (1-104)||(15008437-15008541)
chr5 (1-98)||(1839238-1839336)
chr5 (1-100)||(9226380-9226481)
chr5 (62-104)||(189521-189563)
chr5 (1-102)||(3640086-3640188)
chr5 (16-97)||(30004685-30004767)
chr5 (4-100)||(41724272-41724370)
chr5 (4-100)||(6446409-6446506)
chr5 (1-104)||(9939318-9939423)
chr5 (1-104)||(6292201-6292304)
chr5 (1-104)||(16437451-16437555)
chr5 (1-99)||(5042328-5042427)
chr5 (1-44)||(6517792-6517835)
chr5 (1-104)||(18695398-18695503)
chr5 (1-103)||(6940037-6940141)
chr5 (1-63)||(20770211-20770273)
chr5 (1-92)||(21136343-21136430)
chr5 (1-104)||(30640870-30640974)
chr5 (1-62)||(18842251-18842312)
chr5 (1-105)||(37700540-37700644)
chr5 (36-99)||(2224906-2224970)
chr5 (1-99)||(34888700-34888800)
[»] chr3 (49 HSPs)
chr3 (1-104)||(51465801-51465905)
chr3 (1-104)||(3953362-3953466)
chr3 (1-104)||(24482850-24482954)
chr3 (1-104)||(55400079-55400183)
chr3 (6-103)||(46852020-46852118)
chr3 (1-104)||(50206857-50206961)
chr3 (1-100)||(52937263-52937363)
chr3 (4-103)||(24095294-24095394)
chr3 (1-101)||(39697112-39697213)
chr3 (1-105)||(46019542-46019647)
chr3 (1-103)||(46253702-46253803)
chr3 (1-99)||(24480343-24480442)
chr3 (1-100)||(20080152-20080253)
chr3 (4-104)||(41281608-41281709)
chr3 (1-106)||(24645436-24645542)
chr3 (4-104)||(6999253-6999354)
chr3 (1-107)||(26672478-26672583)
chr3 (1-99)||(21196204-21196303)
chr3 (1-103)||(34057841-34057944)
chr3 (1-103)||(49761387-49761490)
chr3 (1-104)||(9158759-9158864)
chr3 (1-105)||(21005062-21005167)
chr3 (1-108)||(37927087-37927196)
chr3 (14-104)||(23183506-23183597)
chr3 (25-106)||(55282575-55282657)
chr3 (4-103)||(36412206-36412307)
chr3 (1-104)||(37410955-37411059)
chr3 (4-106)||(26645109-26645212)
chr3 (1-81)||(50638261-50638342)
chr3 (1-104)||(35201427-35201530)
chr3 (1-103)||(37508386-37508489)
chr3 (1-103)||(44677372-44677475)
chr3 (1-103)||(54195420-54195523)
chr3 (1-97)||(29573249-29573347)
chr3 (16-104)||(10206860-10206949)
chr3 (1-105)||(29633958-29634063)
chr3 (3-98)||(27511807-27511902)
chr3 (1-104)||(36121901-36122005)
chr3 (1-103)||(51973256-51973359)
chr3 (36-106)||(18741231-18741302)
chr3 (1-103)||(54028022-54028125)
chr3 (1-104)||(16675418-16675517)
chr3 (1-51)||(30909109-30909159)
chr3 (5-62)||(10465018-10465075)
chr3 (1-104)||(33795611-33795716)
chr3 (1-103)||(54694001-54694104)
chr3 (1-100)||(28419105-28419205)
chr3 (1-100)||(32767756-32767856)
chr3 (1-104)||(39670984-39671088)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-104)||(38505-38609)
[»] chr8 (47 HSPs)
chr8 (1-103)||(31597028-31597131)
chr8 (1-105)||(12707229-12707335)
chr8 (1-104)||(16872043-16872147)
chr8 (1-103)||(2733067-2733171)
chr8 (5-103)||(34018892-34018991)
chr8 (1-106)||(42569614-42569720)
chr8 (1-104)||(9208144-9208249)
chr8 (1-99)||(16327043-16327143)
chr8 (1-103)||(30439394-30439497)
chr8 (1-104)||(36885375-36885479)
chr8 (1-104)||(29440409-29440514)
chr8 (1-104)||(36110218-36110322)
chr8 (8-102)||(45508615-45508715)
chr8 (1-99)||(7472919-7473017)
chr8 (1-115)||(36424477-36424593)
chr8 (1-61)||(41159820-41159880)
chr8 (4-102)||(42110071-42110171)
chr8 (1-103)||(1871503-1871605)
chr8 (1-103)||(35031385-35031488)
chr8 (4-102)||(37597321-37597420)
chr8 (1-100)||(4658145-4658254)
chr8 (1-104)||(28646752-28646857)
chr8 (1-104)||(28651336-28651441)
chr8 (1-103)||(22706128-22706232)
chr8 (15-98)||(23792983-23793067)
chr8 (1-104)||(32843829-32843933)
chr8 (1-106)||(38234087-38234197)
chr8 (1-99)||(38708186-38708286)
chr8 (1-103)||(7955895-7955998)
chr8 (27-101)||(36568067-36568142)
chr8 (29-106)||(14707228-14707306)
chr8 (1-106)||(41541937-41542042)
chr8 (4-104)||(32847573-32847674)
chr8 (16-104)||(34591359-34591448)
chr8 (39-98)||(38958444-38958505)
chr8 (1-104)||(1633777-1633881)
chr8 (1-99)||(4994461-4994561)
chr8 (1-104)||(16966865-16966969)
chr8 (38-100)||(9549090-9549153)
chr8 (38-100)||(45519673-45519736)
chr8 (1-62)||(12366978-12367039)
chr8 (70-103)||(26000691-26000724)
chr8 (1-103)||(29028849-29028952)
chr8 (1-104)||(7478860-7478963)
chr8 (1-103)||(10644689-10644793)
chr8 (1-104)||(11017885-11017989)
chr8 (1-104)||(40739800-40739903)
[»] scaffold0532 (1 HSPs)
scaffold0532 (1-104)||(11044-11148)
[»] scaffold0221 (1 HSPs)
scaffold0221 (5-68)||(8298-8361)
[»] scaffold1956 (1 HSPs)
scaffold1956 (1-63)||(850-912)
[»] scaffold0471 (1 HSPs)
scaffold0471 (1-104)||(87-191)


Alignment Details
Target: chr4 (Bit Score: 82; Significance: 8e-39; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 13139228 - 13139329
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaattgtcaaccaaatgattgttcaaataacactc 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||| |||||||||||||||||    
T  13139228 atctctctatttttttggttttcgtgcaaataccaactttttctttgtaaattatagttgtccaaaaattatcaaccaaatggttgttcaaataacactc 13139327  T
Q  101 ct 102  Q
    ||    
T  13139328 ct 13139329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 14010109 - 14010003
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||| |||||| ||||||||||||| ||| |||||||||||||    
T  14010109 atctctctattattttggttttcgtgcaaataccaattttttctttataaattatggttgtcccaaaagttgtcaaccaaataattattcaaataacact 14010010  T
Q  100 cctctaa 106  Q
    |||||||    
T  14010009 cctctaa 14010003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 31657726 - 31657830
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||    
T  31657726 atctctctattgctttggttttcgtgtaaataccaactttttctatgtaaatgatggttgtcccaaaaattgtcaaccaaatggttgtttaaataacact 31657825  T
Q  100 cctct 104  Q
    |||||    
T  31657826 cctct 31657830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 46405965 - 46405865
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcca-aaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||    
T  46405965 atctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtccaaaaaattatcaaccaaatgattgttcaaataacact 46405866  T
Q  100 c 100  Q
    |    
T  46405865 c 46405865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 45143661 - 45143562
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacactcct 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||  |||||||||||||| ||||    
T  45143661 tctctattattttggttttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgtcaaccaaatagttgttcaaataacaatcct 45143562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 45152430 - 45152331
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacactcct 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||  |||||||||||||| ||||    
T  45152430 tctctattattttggttttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgtcaaccaaatagttgttcaaataacaatcct 45152331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 22819729 - 22819834
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||| ||||  |||| |||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||    
T  22819729 atctctttattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacact 22819828  T
Q  100 cctcta 105  Q
    ||||||    
T  22819829 cctcta 22819834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 17683438 - 17683525
Alignment:
Q  18 gttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacactcctct 104  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  17683438 gttttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctct 17683525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 2999192 - 2999298
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||||||| |||||||||| |||| |||||||  ||||| ||||||||||||||||    
T  2999192 atctctctattgctttggttttcatgcaaataccaactttttctttgtaaattatggttgtcctaaaagttgtcaattaaatggttgttcaaataacact 2999291  T
Q  100 cctctaa 106  Q
    |||||||    
T  2999292 cctctaa 2999298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 39344971 - 39344867
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||||||||| ||| ||||| ||||| || ||||||||||| ||||||||||||||||    
T  39344971 atctctctattgctttggttttcgtgcaaataccaattttttctttgtaaattatgattgtctcaaaagttatcaaccaaatggttgttcaaataacact 39344872  T
Q  100 cctct 104  Q
    |||||    
T  39344871 cctct 39344867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 26718448 - 26718550
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||| |||| |||| ||||||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||||| || |||||||||||||    
T  26718448 atctctctattactttgttttttgtgcaaataccaactttttctttgtaaattatgattgtcccaaaaattatcaaccaaatggttattcaaataacact 26718547  T
Q  100 cct 102  Q
    |||    
T  26718548 cct 26718550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 26731076 - 26731178
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||| |||| |||| ||||||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||||| || |||||||||||||    
T  26731076 atctctctattactttgttttttgtgcaaataccaactttttctttgtaaattatgattgtcccaaaaattatcaaccaaatggttattcaaataacact 26731175  T
Q  100 cct 102  Q
    |||    
T  26731176 cct 26731178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 52846217 - 52846116
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacactcct 102  Q
    ||||||||  |||||||||||||||||||| |||||||||||||||||| ||| |||||| |||||||||||| |||||  ||||||||||||||| |||    
T  52846217 tctctattgctttggttttcgtgcaaatacaaactttttctttgtaaattatgattgtcctaaaaattgtcaatcaaatagttgttcaaataacacccct 52846118  T
Q  103 ct 104  Q
    ||    
T  52846117 ct 52846116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 56271440 - 56271544
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||||| ||||||||||||||||| |||||||||  |||| ||||||| ||||||  |||||||||||||||    
T  56271440 atctctctattgctttggttttcgtgcaaatacctactttttctttgtaaattatggttgtcataaaagttgtcaaacaaatggatgttcaaataacact 56271539  T
Q  100 cctct 104  Q
     ||||    
T  56271540 tctct 56271544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 13086102 - 13086205
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| |||||||||||||||||||||||||||||||||| |||||||| |||||| || | || |||| | ||||||||||||||||    
T  13086102 atctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttattaatcaaacggttgttcaaataacact 13086201  T
Q  100 cctc 103  Q
    ||||    
T  13086202 cctc 13086205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 1815992 - 1815888
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| ||||| |||| ||||||||| | ||||||||||||||||| |||| |||| || || |||||||||| ||| ||||||||||||||||    
T  1815992 atctctctattgttttgatttttgtgcaaatatccactttttctttgtaaattatggctgtcacataagttgtcaaccagatggttgttcaaataacact 1815893  T
Q  100 cctct 104  Q
    |||||    
T  1815892 cctct 1815888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 38338913 - 38338809
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| |||| ||||||||||| | ||||||||| ||||| |||||||| ||||||||| |||||||||||||||||| ||||| |||    
T  38338913 atctctctattgctttgatttttgtgcaaatacctattttttctttataaattatggttgttccaaaaattatcaaccaaatgattgttcgaataatact 38338814  T
Q  100 cctct 104  Q
    |||||    
T  38338813 cctct 38338809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 27326740 - 27326683
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt 61  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27326740 tctctattgctttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt 27326683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 12138933 - 12139037
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttg-tccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||| |||| |||| ||||||||||| ||||||||||||||||| ||||||| | || || || |||| |||||| |||||||||||||| |    
T  12138933 atctctctattactttgatttttgtgcaaatacctactttttctttgtaaattatggttgttacataagttatcaatcaaatggttgttcaaataacatt 12139032  T
Q  100 cctct 104  Q
    |||||    
T  12139033 cctct 12139037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 18882966 - 18882862
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| ||||||| |||||||| | ||||||||||||||| ||| || | |||||| |||||||||||||| ||||||||||||||||    
T  18882966 atctctctattgctttgattttcgtacaaatacctattttttctttgtaaattatgatttttccaaaagttgtcaaccaaatggttgttcaaataacact 18882867  T
Q  100 cctct 104  Q
     ||||    
T  18882866 tctct 18882862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 42667285 - 42667389
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    ||||||||||| ||||||||| |||| ||||||  ||||||||||| ||||| ||||||||| || || |||||||||||| |||||||| |||||||||    
T  42667285 atctctctattgttttggtttccgtgtaaatacttactttttctttataaattatggttgtcgcataagttgtcaaccaaattgattgtttaaataacac 42667384  T
Q  99 tcctc 103  Q
    |||||    
T  42667385 tcctc 42667389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 47099102 - 47099203
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||||||  ||||||||||| ||  |||||||||||||| |||||||||| |||| || ||||||||||| ||||||||||||||||    
T  47099102 atctctctattgctttggtt--cgtgcaaatactaatattttctttgtaaattatggttgtcccaaaagttatcaaccaaatggttgttcaaataacact 47099199  T
Q  100 cctc 103  Q
    ||||    
T  47099200 cctc 47099203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 28657432 - 28657333
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaattgtcaaccaaa-tgattgttcaaataacact 99  Q
    |||||||||||  |||||||| |||||||||||| || |||||||||||||| |||||||||  ||| |||||||||||| |  ||||||||||||||||    
T  28657432 atctctctattgctttggtttccgtgcaaatacctacgttttctttgtaaattatggttgtcacaaagttgtcaaccaaattcgttgttcaaataacact 28657333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 43769791 - 43769894
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||| |||| ||||  |||||||||||||||| ||||||||||||||||| ||||||||| || || || ||||| ||||  ||||||||||||||||    
T  43769791 atctctttattgttttaattttcgtgcaaatacccactttttctttgtaaattatggttgtcgcataagttatcaacaaaatagttgttcaaataacact 43769890  T
Q  100 cctc 103  Q
    ||||    
T  43769891 cctc 43769894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 9362670 - 9362565
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    ||||||||||| ||||| ||| |||||||||||| ||||||||||| ||||  ||||||||| ||||| || ||||| ||| || |||||||||||||||    
T  9362670 atctctctattgttttgatttccgtgcaaatacctactttttctttataaactatggttgtcacaaaagttatcaactaaattggttgttcaaataacac 9362571  T
Q  99 tcctct 104  Q
    ||||||    
T  9362570 tcctct 9362565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 51194349 - 51194453
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| || |||||||||||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || || ||||||||||||||||    
T  51194349 atctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcatcaaattggttgttcaaataacact 51194448  T
Q  100 cctct 104  Q
    |||||    
T  51194449 cctct 51194453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 38715328 - 38715433
Alignment:
Q  2 tctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaat-gattgttcaaataacact 99  Q
    ||||||||||  |||||||| |||||||||| | || |||||||| ||||| || |||||| || || ||||||||||||| ||||||||||||||||||    
T  38715328 tctctctattgctttggtttccgtgcaaataactaccttttctttataaattatagttgtcacacaagttgtcaaccaaattgattgttcaaataacact 38715427  T
Q  100 cctcta 105  Q
     |||||    
T  38715428 tctcta 38715433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 49896657 - 49896564
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaat 93  Q
    |||||||||||  |||| ||||||||  |||||||||||||||||||||||| ||||||||| ||  | ||||| |||||||| ||||||||||    
T  49896657 atctctctattgctttgattttcgtgtcaataccaactttttctttgtaaattatggttgtctcatgagttgtccaccaaatggttgttcaaat 49896564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 12799807 - 12799899
Alignment:
Q  14 tttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacactcctcta 105  Q
    |||| |||||||| ||||||| | ||||||||||||||| ||| ||||| || || |||| ||||||||| |||||||||||||| |||||||    
T  12799807 tttgattttcgtgtaaatacctattttttctttgtaaattatgattgtcacataagttgttaaccaaatggttgttcaaataacattcctcta 12799899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 33860726 - 33860830
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    ||||||||||| ||||||||| |||||||||||  ||||||||||||||||| || |||||| |  || ||||||| |||| || |||||||||||| ||    
T  33860726 atctctctattgttttggtttccgtgcaaatacttactttttctttgtaaattatcgttgtcacgtaagttgtcaatcaaattggttgttcaaataatac 33860825  T
Q  99 tcctc 103  Q
    |||||    
T  33860826 tcctc 33860830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 14451473 - 14451576
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| || |||||||||||  |||||||  ||||||||||||||  ||||||||| || || |||||| | || || ||||||||||||||||    
T  14451473 atctctctattgttatggttttcgtgtcaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 14451572  T
Q  100 cctc 103  Q
    ||||    
T  14451573 cctc 14451576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 21260378 - 21260481
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| || |||||| ||||| ||||||| |||||||||||||||  ||| ||||| || ||||||||| | || || ||||||||| ||||||    
T  21260378 atctctctattgttatggtttccgtgccaataccacctttttctttgtaaaatatgattgtcaaataaattgtcaccaaattggttgttcaaaaaacact 21260477  T
Q  100 cctc 103  Q
    ||||    
T  21260478 cctc 21260481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 32696261 - 32696367
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||| ||||  |||| ||||||||| |||| | ||||||||||||||||| |||||||| ||  || ||||| ||||| || |||||||||||||| |    
T  32696261 atctctttattgctttgattttcgtgccaatatctactttttctttgtaaattatggttgtcccttaagttgtccaccaattggttgttcaaataacatt 32696360  T
Q  100 cctctaa 106  Q
    |||||||    
T  32696361 cctctaa 32696367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 41486134 - 41486028
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||| ||||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || || ||||||||||||||||    
T  41486134 atctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 41486035  T
Q  100 cctctaa 106  Q
    |||||||    
T  41486034 cctctaa 41486028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 23662308 - 23662211
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaa-tgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataac 96  Q
    |||||||| |||||||| ||||||||| |||| ||| |||||||||||||| | |||||| || || ||||||||||  ||||| |||||||||||||    
T  23662308 atctctctgttattttgattttcgtgccaatatcaattttttctttgtaaatttatggttatcaaataaattgtcaattaaatggttgttcaaataac 23662211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 47965832 - 47965921
Alignment:
Q  16 tggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacactcctct 104  Q
    |||||||||||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || || |||||||||||||||||||||    
T  47965832 tggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctct 47965921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 9118855 - 9118751
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | || ||||||||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || || ||||||||||||||||    
T  9118855 atctctctattgctatgattttcgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 9118756  T
Q  100 cctct 104  Q
    |||||    
T  9118755 cctct 9118751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 32696747 - 32696675
Alignment:
Q  34 caactttttctttgtaaatg-atggttgtccaa-aaattgtcaaccaaatgattgttcaaataacactcctct 104  Q
    |||||||| ||||||||||  |||||||| ||| ||||||||||||||||| ||||||||||||||| |||||    
T  32696747 caacttttactttgtaaatttatggttgtacaataaattgtcaaccaaatggttgttcaaataacacacctct 32696675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 42815484 - 42815588
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaa-tgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacac 98  Q
    |||||||||||  |||| |||||||||||| ||| |||||| ||||||||| | ||||||||| || || ||||| | |||||| |||||||||||||||    
T  42815484 atctctctattgctttgattttcgtgcaaaaacctacttttcctttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaataacac 42815583  T
Q  99 tcctc 103  Q
     ||||    
T  42815584 acctc 42815588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 51887743 - 51887846
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| ||||| |||||||||||||||  | | |||||||| |||| |||||||||| | || |||||||  ||| | ||||||||||||||||    
T  51887743 atctctctattgttttgattttcgtgcaaatacatattctttctttgcaaattatggttgtcctataagttgtcaattaaa-ggttgttcaaataacact 51887841  T
Q  100 cctct 104  Q
    |||||    
T  51887842 cctct 51887846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 53299268 - 53299328
Alignment:
Q  2 tctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc 62  Q
    ||||| |||| ||||||||||||| |||||||||| ||||||||||||||| ||| |||||    
T  53299268 tctctttattgttttggttttcgtacaaataccaattttttctttgtaaatcatgcttgtc 53299328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 33899317 - 33899218
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| || |||||| ||||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || || ||||||||||||||||    
T  33899317 atctctctattgttatggtttccgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 33899218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 39312607 - 39312504
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttg-tccaaaaattgtcaaccaaat-gattgttcaaataacac 98  Q
    |||||| ||||  ||||||||||||||||||||| | ||||||||| ||||| ||||||| | || ||| |||||| ||||| | | |||||||||||||    
T  39312607 atctctttattgctttggttttcgtgcaaatacctattttttctttataaattatggttgttacataaaatgtcaagcaaataggtggttcaaataacac 39312508  T
Q  99 tcct 102  Q
    ||||    
T  39312507 tcct 39312504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 12595620 - 12595523
Alignment:
Q  2 tctctctattattttggttttcgtgcaaataccaactttttctttgtaaatg-atggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacac 98  Q
    |||||||||| ||||||||||||||  |||||| |||||  |||| |||||  |||||||||| ||||||||||| | ||||| |||||||||||||||    
T  12595620 tctctctattgttttggttttcgtgtcaatacctactttc-ctttataaatttatggttgtcccaaaaattgtcatcaaaatggttgttcaaataacac 12595523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 37514123 - 37514025
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaa-tgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataaca 97  Q
    |||||||||||  |||| ||||||||| || ||| |||||||||||||||| | ||||||||| || ||||| || | |||||| ||||||||||||||    
T  37514123 atctctctattgctttgattttcgtgccaaaacctactttttctttgtaaatttatggttgtcaaataaattctctatcaaatggttgttcaaataaca 37514025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 40609688 - 40609801
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatga------tggttgtc-caaaaattgtcaaccaaat-gattgttcaaa 92  Q
    ||||||||||| |||||||||  ||||||||||  | ||||||||| ||||| |      |||||||| ||||| ||||||||||||| | |||||||||    
T  40609688 atctctctattgttttggtttctgtgcaaatacatattttttctttataaattaaaattatggttgtcacaaaagttgtcaaccaaattggttgttcaaa 40609787  T
Q  93 taacactcctctaa 106  Q
    ||||||||||||||    
T  40609788 taacactcctctaa 40609801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 42491167 - 42491252
Alignment:
Q  14 tttggttttcgtgcaaataccaactttttctttgt-aaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacac 98  Q
    ||||||||| |||| ||||||  |||||||||||| |||| |||||||||| |||| ||||||| |||||| |||||||||||||||    
T  42491167 tttggtttttgtgccaatacct-ctttttctttgtgaaattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacac 42491252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 3078899 - 3078794
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaa-tgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacac 98  Q
    |||||||||||  |||| ||||||||| || ||| |||||| ||||||||| | ||||||||| || || ||||| | ||||||||||||||||||| ||    
T  3078899 atctctctattgctttgattttcgtgccaaaacctacttttcctttgtaaatttatggttgtcaaataagttgtctatcaaatgattgttcaaataagac 3078800  T
Q  99 tcctct 104  Q
     |||||    
T  3078799 acctct 3078794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 4949592 - 4949685
Alignment:
Q  8 tattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatga-ttgttcaaataacact 99  Q
    |||| ||||||||| ||| |||||||  ||||||||||||||||| || |||||| || || |||||||| |||| | ||||||||||||||||    
T  4949592 tattgttttggtttccgtacaaatacttactttttctttgtaaattatagttgtcgcataagttgtcaactaaattagttgttcaaataacact 4949685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 5932134 - 5932045
Alignment:
Q  16 tggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacactcctct 104  Q
    |||||| ||||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || || |||||||||||||||||||||    
T  5932134 tggtttccgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctct 5932045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 21617263 - 21617366
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt--ccaaaaattgtcaaccaaatgattgttcaaataacac 98  Q
    ||||||||||| ||||| |||||||||||||||| | | |||||||  |||| ||||||||  ||| || |||||||  ||| || ||||||||||||||    
T  21617263 atctctctattgttttgattttcgtgcaaatacctattctttctttacaaattatggttgtccccataagttgtcaattaaagga-tgttcaaataacac 21617361  T
Q  99 tcctc 103  Q
    |||||    
T  21617362 tcctc 21617366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 23853814 - 23853911
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataaca 97  Q
    |||||||||||||||||||||| || |||||||  ||||||||| ||||||| || ||| | ||||| ||||| ||  ||||  ||||||||||||||    
T  23853814 atctctctattattttggtttttgttcaaatacatactttttctgtgtaaattatagttttcccaaacattgttaataaaatagttgttcaaataaca 23853911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 53654741 - 53654636
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    ||||||| ||||  || ||||| |||||| |||| ||| ||||||||||||| |||||||| ||| ||||| |||| |||| || || ||||||||||||    
T  53654741 atctctccattacgttagtttttgtgcaactacctactatttctttgtaaattatggttgtcccataaattatcaatcaaattggttattcaaataacac 53654642  T
Q  99 tcctct 104  Q
    ||||||    
T  53654641 tcctct 53654636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 54669540 - 54669471
Alignment:
Q  36 actttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacactcctct 104  Q
    ||||||||||||||||| ||||||||| || || |||||| | || || |||||||||||||||||||||    
T  54669540 actttttctttgtaaattatggttgtcaaataagttgtcatcaaattggttgttcaaataacactcctct 54669471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 13104373 - 13104269
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||| ||||||  |||||| || ||||||||| | ||||||||||||||||| |||||||||    || ||||||| |||||| ||||||||||| || |    
T  13104373 atctttctattgctttggtgtttgtgcaaatatctactttttctttgtaaattatggttgtcatgtaagttgtcaatcaaatggttgttcaaatatcatt 13104274  T
Q  100 cctct 104  Q
    |||||    
T  13104273 cctct 13104269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 17475991 - 17476059
Alignment:
Q  36 actttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacactcctc 103  Q
    ||||||||||||||||| ||| ||||| || || |||||| | || |||||||||||||||||||||||    
T  17475991 actttttctttgtaaattatgattgtcaaataagttgtcaccaaattgattgttcaaataacactcctc 17476059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 21172360 - 21172460
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||| |||| |||||||||||||   |||| | ||||||||||||||||| ||| || | ||| ||||| ||||| ||||  ||||||||||||||||    
T  21172360 atctctttattgttttggttttcgtatcaatatctactttttctttgtaaattatgattatcccataaattatcaactaaatagttgttcaaataacact 21172459  T
Q  100 c 100  Q
    |    
T  21172460 c 21172460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 30079926 - 30080029
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | | |||| ||||| |||||||  ||||||||||||||| ||||||||| || || || ||| | || || ||||||||||||||||    
T  30079926 atctctctattgctatagtttccgtgccaataccacttttttctttgtaaattatggttgtcaaataagttttcaccaaattggttgttcaaataacact 30080025  T
Q  100 cctc 103  Q
    ||||    
T  30080026 cctc 30080029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 35936083 - 35936150
Alignment:
Q  39 ttttctttgtaaatg-atggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacactcctct 104  Q
    |||||||||| |||| |||||||||| |||| ||||||  |||||||||||||||||||||| |||||    
T  35936083 ttttctttgtgaatgtatggttgtcctaaaagttgtcacacaaatgattgttcaaataacacacctct 35936150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 50831711 - 50831648
Alignment:
Q  37 ctttttctttgtaaa-tgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacac 98  Q
    ||||||||||||||| | |||||||||| |||| ||||||| |||||| |||||||||||||||    
T  50831711 ctttttctttgtaaaattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacac 50831648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 51746300 - 51746403
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| || |||||| ||||| |||| ||  ||||||||||||||  ||| ||||| || || |||||| | || | |||||||||||||||||    
T  51746300 atctctctattgttatggtttccgtgccaatatcacttttttctttgtaaaatatgtttgtcaaataagttgtcaccaaattaattgttcaaataacact 51746399  T
Q  100 cctc 103  Q
    ||||    
T  51746400 cctc 51746403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 53152312 - 53152209
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||| |||| || ||||||  |||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || || ||||||||||||||||    
T  53152312 atctctatattgttatggtttctgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 53152213  T
Q  100 cctc 103  Q
    ||||    
T  53152212 cctc 53152209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 53647416 - 53647309
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaat-gattgttcaaataacac 98  Q
    |||||||||||  |||| ||| |||  ||||||| |  |||||||| ||||| ||||||||| || || ||||||||||||| ||||||||||||| |||    
T  53647416 atctctctattgctttgatttccgtataaatacctatcttttctttataaattatggttgtcacataagttgtcaaccaaattgattgttcaaatatcac 53647317  T
Q  99 tcctctaa 106  Q
    | ||||||    
T  53647316 ttctctaa 53647309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 28458368 - 28458306
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc 63  Q
    |||||||||||  |||| ||||||||  |||||| ||||||||||||||||| ||| ||||||    
T  28458368 atctctctattgctttgattttcgtgtcaatacctactttttctttgtaaattatgattgtcc 28458306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 50273063 - 50272961
Alignment:
Q  2 tctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacactc 100  Q
    ||||||||||  | |||||| ||||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || || |||||||||||| ||||    
T  50273063 tctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataatactc 50272964  T
Q  101 ctc 103  Q
    |||    
T  50272963 ctc 50272961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 51852156 - 51852261
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| |||||||||| ||||||||| | || ||||||||||| || |||||| | ||| ||||| ||||||| ||| ||||| | |||| |||    
T  51852156 atctctctattgttttggtttttgtgcaaata-ctacattttctttgtagattatggttatcccataaattttcaaccagatggttgtttagataatact 51852254  T
Q  100 cctctaa 106  Q
    | |||||    
T  51852255 catctaa 51852261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 21025719 - 21025788
Alignment:
Q  39 ttttctttgtaaatga-tggttgtc-caaaaattgtcaaccaaatgattgttcaaataacactcctctaa 106  Q
    |||||||||||||| | |||||||| ||||| ||||||  ||| |||||||||||||||||| |||||||    
T  21025719 ttttctttgtaaattagtggttgtcacaaaagttgtcactcaattgattgttcaaataacacacctctaa 21025788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 34995403 - 34995499
Alignment:
Q  3 ctctctattattttggttttcgtgcaaataccaactttttctttgtaaatg-atggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacac 98  Q
    |||||||||| |||||||| ||||  |||||| | ||||||||| |||||  ||||||||||  ||| || |||| ||||||||||||||||||||||    
T  34995403 ctctctattactttggtttccgtgtcaataccta-tttttctttataaatttatggttgtccctaaagttatcaaacaaatgattgttcaaataacac 34995499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 1140692 - 1140740
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaat 52  Q
    |||||||| ||||||||||||||  |||||  |||||||||||||||||    
T  1140692 tctctattgttttggttttcgtgtcaatacttactttttctttgtaaat 1140740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 31076134 - 31076237
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||| | |||||| ||||  ||||| | |||||||||||||||| ||||||||| || || |||||| | || || ||||| ||||||||||    
T  31076134 atctctctattactatggtttccgtgtcaatacta-ctttttctttgtaaattatggttgtcaaataagttgtcaccaaattggttgtttaaataacact 31076232  T
Q  100 cctct 104  Q
     ||||    
T  31076233 actct 31076237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 754429 - 754325
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttg-tccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||    
T  754429 atctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatggttgttccaaaaattgtcaaccaaatggttgttcaaataacact 754330  T
Q  100 cctct 104  Q
    |||||    
T  754329 cctct 754325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 1369440 - 1369547
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||    
T  1369440 atctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtctcaaaaattgtcaaccaaatggttgttcaaataacact 1369539  T
Q  100 cctctaac 107  Q
    | ||||||    
T  1369540 catctaac 1369547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 35213552 - 35213448
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| |||||||||||||| ||||||||||||||||    
T  35213552 atctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatgattgtcccaaaagttgtcaaccaaatggttgttcaaataacact 35213453  T
Q  100 cctct 104  Q
    |||||    
T  35213452 cctct 35213448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 32459507 - 32459403
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||| |||||  ||||||||||||||||    
T  32459507 atctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatggttgtcctaaaagttgtcaatcaaattgttgttcaaataacact 32459408  T
Q  100 cctct 104  Q
    |||||    
T  32459407 cctct 32459403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 13143373 - 13143270
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| ||||||||||||||| |||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||    
T  13143373 atctctctattgctttgattttcgtgcaaatacaaactttttctttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacact 13143274  T
Q  100 cctc 103  Q
    ||||    
T  13143273 cctc 13143270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 18141292 - 18141187
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| |||||||||| |||||||||| |||||||||||| ||||||||| ||||| |||||||||||||| ||||||||||||||||    
T  18141292 atctctctattgctttgattttcgtgcacataccaacttattctttgtaaattatggttgtcacaaaagttgtcaaccaaatggttgttcaaataacact 18141193  T
Q  100 cctcta 105  Q
    ||||||    
T  18141192 cctcta 18141187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 2689056 - 2688952
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    ||||||||||| |||||||||  ||||||||||| ||||||||||| ||||| ||||||||| ||||| |||||||||||| |||||||||||||||||     
T  2689056 atctctctattgttttggtttatgtgcaaatacctactttttctttataaattatggttgtcacaaaagttgtcaaccaaattgattgttcaaataacat 2688957  T
Q  99 tcctc 103  Q
    |||||    
T  2688956 tcctc 2688952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 20822859 - 20822761
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||||||||||||||||||||||  |||| ||| ||||| |||||||||| |||| |||||||||||||| ||||||||||||||||    
T  20822859 atctctctattgctttggttttcgtgcaaataccaatatttt-tttataaattatggttgtcctaaaagttgtcaaccaaatggttgttcaaataacact 20822761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 32046778 - 32046877
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| | |||| ||| ||||||||| ||||||||||||| ||||| |||||||| ||| || |||||||||||||| ||||||||||||||||    
T  32046778 atctctctattgtgttggattttgtgcaaataacaactttttctttataaattatggttgtcccataagttgtcaaccaaatggttgttcaaataacact 32046877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 6531174 - 6531067
Alignment:
Q  1 atctctctattatt---ttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataac 96  Q
    ||||||||||||||   ||| |||||||||||||||  ||||||||||||||||| |||||||| |||  | || ||||||||||| |||||||||||||    
T  6531174 atctctctattattgctttgattttcgtgcaaatacatactttttctttgtaaattatggttgtcccattagttatcaaccaaatggttgttcaaataac 6531075  T
Q  97 actcctct 104  Q
    ||||||||    
T  6531074 actcctct 6531067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 23628439 - 23628546
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaac--tttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataac 96  Q
    ||||||||||||||||||||| |||||||||| | ||  ||||||||| ||||| |||||||||  ||||||||||||||||| || ||||| |||||||    
T  23628439 atctctctattattttggtttccgtgcaaatatctactttttttctttataaattatggttgtcataaaaattgtcaaccaaattggttgtttaaataac 23628538  T
Q  97 actcctct 104  Q
    ||||||||    
T  23628539 actcctct 23628546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 26832726 - 26832830
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| |||||||||||||||||||||  | |||||||| |||||| ||||||||| || || ||||||| |||||| |||||||||||| |||    
T  26832726 atctctctattgttttggttttcgtgcaaatacatagtttttcttcgtaaattatggttgtcacataagttgtcaatcaaatggttgttcaaataagact 26832825  T
Q  100 cctct 104  Q
     ||||    
T  26832826 tctct 26832830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 3832556 - 3832646
Alignment:
Q  14 tttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacactcctc 103  Q
    ||||| |||| |||||||| ||||| ||||||||||||| |||||||| ||| || ||||||| |||||| ||||||||||||||||||||    
T  3832556 tttggatttcatgcaaataacaactctttctttgtaaattatggttgtcccataagttgtcaatcaaatggttgttcaaataacactcctc 3832646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 5028257 - 5028160
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataaca 97  Q
    |||||| ||||  ||||||||||||| ||||| | ||||||||||| ||||| ||||||||| || || || ||||||||||||||||||||||||||    
T  5028257 atctctttattgctttggttttcgtgtaaatatctactttttctttataaattatggttgtctcataagttatcaaccaaatgattgttcaaataaca 5028160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 2943517 - 2943609
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttg-tccaaaaattgtcaaccaaatgattgttcaaataa 95  Q
    ||||||||||||||||||||||||||||| | ||||||||||| ||||  ||||||| |  | ||||||| ||||||||| ||||||||||||    
T  2943517 tctctattattttggttttcgtgcaaatatctactttttctttataaaatatggttgttttataaattgttaaccaaatggttgttcaaataa 2943609  T

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Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 11547520 - 11547414
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||| ||||  |||||||  ||||||||||||||| |||| |||| || ||||||||| | || |||||||||||||||||||    
T  11547520 atctctctattgctatggtttccgtgtcaataccacttttttctttgtaaattatggctgtcaaataaattgtcaccaaattgattgttcaaataacact 11547421  T
Q  100 cctctaa 106  Q
    |||||||    
T  11547420 cctctaa 11547414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 31749445 - 31749543
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacac 98  Q
    ||||||||||| ||||  |||||||| ||||| | | ||||||||||||||| ||||||||| |  || ||||||| ||||||||||||||||||||||    
T  31749445 atctctctattgttttaattttcgtgtaaatatctattttttctttgtaaattatggttgtctcttaagttgtcaatcaaatgattgttcaaataacac 31749543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9050213 - 9050313
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    |||| |||||||||||| ||||||||||| |||| ||| ||||||||||||| |||  ||||| | ||||||||||| ||| ||||| ||||||||||||    
T  9050213 atctttctattattttgattttcgtgcaactacctactatttctttgtaaattatgactgtcctataaattgtcaactaaattgattattcaaataacac 9050312  T
Q  99 t 99  Q
    |    
T  9050313 t 9050313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 28041805 - 28041701
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcca-aaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    |||||||||||  ||||| || ||||||| |||  ||||||||||||||||||||||||||  |  || |||||||||||| |||||||| |||||||||    
T  28041805 atctctctattgctttggcttccgtgcaagtacttactttttctttgtaaatgatggttgttaagtaagttgtcaaccaaattgattgttaaaataacac 28041706  T
Q  99 tcctc 103  Q
    |||||    
T  28041705 tcctc 28041701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 868943 - 868840
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||| || |||||||  ||||||||||||||||| |||||| ||    ||  ||||||||||||| ||||||||||||||||    
T  868943 atctctctattgatttggtttttgtacaaatacttactttttctttgtaaattatggttatcatgtaaggtgtcaaccaaatggttgttcaaataacact 868844  T
Q  100 cctc 103  Q
    ||||    
T  868843 cctc 868840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14699655 - 14699594
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc 62  Q
    |||||||| ||  ||||||||||||||||||||| ||||||||||||||||| || ||||||    
T  14699655 atctctctgttgctttggttttcgtgcaaatacctactttttctttgtaaattattgttgtc 14699594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 2075442 - 2075343
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| || | |||| ||||| |||||||  ||||||||||||||| ||||||||| || || |||||| | || || ||||||||||||||||    
T  2075442 atctctctattgttatagtttccgtgccaataccacttttttctttgtaaattatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 2075343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 29180623 - 29180535
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaat-gatggttgtccaa-aaattgtcaaccaaatgattgt 87  Q
    |||||||||||||||| |||||| ||  |||||| ||  |||||||||||||  ||||||||| || ||||||||||||||||| ||||    
T  29180623 atctctctattattttagttttcatgtcaatacctacaatttctttgtaaatctatggttgtcaaataaattgtcaaccaaatggttgt 29180535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 30036770 - 30036674
Alignment:
Q  16 tggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacactcctctaactaat 111  Q
    |||||| ||||| |||||||  ||||||||||||||  ||| ||||| || || |||||| | || ||||||||||||||||||| |||||| ||||    
T  30036770 tggtttccgtgccaataccatttttttctttgtaaagtatgattgtcaaataagttgtcaccaaattgattgttcaaataacacttctctaaataat 30036674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 14693243 - 14693192
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaat 52  Q
    |||||||| ||  |||||||| |||||||||||| |||||||||||||||||    
T  14693243 atctctctgttgctttggtttccgtgcaaatacctactttttctttgtaaat 14693192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24842447 - 24842498
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaat 52  Q
    ||||||||||| ||||||||| |||||||||||| |||||||| || |||||    
T  24842447 atctctctatttttttggtttccgtgcaaatacctactttttccttataaat 24842498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 6856155 - 6856057
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatg-atggttgtc-caaaaattgtcaaccaaatgattgttcaaataaca 97  Q
    |||||| ||||  |||| ||||| ||| |||||| | ||||||||| |||||  ||| ||||| || ||||||||||||||||| ||||||||||||||    
T  6856155 atctctttattgctttgattttcttgccaatacctattttttctttataaatctatgtttgtctcataaattgtcaaccaaatggttgttcaaataaca 6856057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 3610952 - 3610847
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||| ||||  |||||||  ||||||||||||||  |||||| || || || |||||| | || || ||||||||||||||||    
T  3610952 atctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatggttatcaaataagttgtcaccaaattggttgttcaaataacact 3610853  T
Q  100 cctcta 105  Q
    ||||||    
T  3610852 cctcta 3610847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 5327567 - 5327478
Alignment:
Q  16 tggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacactcctct 104  Q
    |||||| ||||  |||||||  ||||||||||||||  ||||||||| || || |||||| | || || |||||||||||||||||||||    
T  5327567 tggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctct 5327478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 24980014 - 24980111
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatga-tggttgtc-caaaaattgtcaaccaaatgattgttcaaataac 96  Q
    |||||||||||| |||| ||||| ||  |||||  ||||||||||||||| | | ||||| || || |||||||||||| |||| |||||||||||||    
T  24980014 atctctctattactttgattttcatgtcaatacatactttttctttgtaattcaatggttatcacataaattgtcaaccgaatggttgttcaaataac 24980111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 31883259 - 31883199
Alignment:
Q  37 ctttttctttgtaaa-tgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataa 95  Q
    ||||||||||||||| | |||||||||| |||||||||||| |||||  ||||||||||||    
T  31883259 ctttttctttgtaaaattatggttgtcccaaaaattgtcaatcaaatagttgttcaaataa 31883199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 34504100 - 34504200
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||| ||||  |||||||| ||||||||||||||  ||| ||||| || || |||||| | || || ||||||||||||||||    
T  34504100 atctctctattgctatggtttccgtgtcaataccaattttttctttgtaaaatatgattgtcaaataagttgtcaccaaattggttgttcaaataacact 34504199  T
Q  100 c 100  Q
    |    
T  34504200 c 34504200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 43573534 - 43573429
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  43573534 atctctctattgctttggttttcgtgcaaataccaattttttctttataaattatggttgtctcaaaaattgtcaaccaaatgattgttcaaataacact 43573435  T
Q  100 cctcta 105  Q
    ||||||    
T  43573434 cctcta 43573429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 28036824 - 28036929
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||| |||||||| |||||||    
T  28036824 atctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaattaacact 28036923  T
Q  100 cctcta 105  Q
    ||||||    
T  28036924 cctcta 28036929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 41893995 - 41894098
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||| || |||||||||||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  41893995 atctctctgttgttttggttttcgtgcatataccaacttttcctttgtaaattatggttgtcacaaaaattgtcaactaaatggttgttcaaataacact 41894094  T
Q  100 cctc 103  Q
    ||||    
T  41894095 cctc 41894098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 11352965 - 11352861
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||| ||||  ||||||||||||| ||||||||| ||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||    
T  11352965 atctctttattgctttggttttcgtgtaaataccaaatttttctttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacact 11352866  T
Q  100 cctct 104  Q
    |||||    
T  11352865 cctct 11352861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 7817716 - 7817822
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| |||||||||||||| | ||||||||||||||||| ||||||||| || || |||||||||||||| ||||||||||||||||    
T  7817716 atctctctattgctttgattttcgtgcaaatatccactttttctttgtaaattatggttgtcacataagttgtcaaccaaatggttgttcaaataacact 7817815  T
Q  100 cctctaa 106  Q
    |||||||    
T  7817816 cctctaa 7817822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 44184550 - 44184446
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttg-tccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||||| | ||||||||||||||| ||||||| ||||||| |||||||||||||| |||||||||||| |||    
T  44184550 atctctctattgctttggttttcgtgcaaatacctattttttctttgtaaattatggttgttccaaaagttgtcaaccaaatggttgttcaaataatact 44184451  T
Q  100 cctct 104  Q
     ||||    
T  44184450 actct 44184446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 13729806 - 13729909
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||   |||||||||||||||||||||| ||||||||||||||| |||||||| |||||| |||||||||||||| ||| | ||||||||||    
T  13729806 atctctctattgcgttggttttcgtgcaaataccaattttttctttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgctgaaataacact 13729905  T
Q  100 cctc 103  Q
    ||||    
T  13729906 cctc 13729909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 12645901 - 12645795
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| |||||||||||||| ||||||||||||||||||| |||||| || ||||| |||||||||||||  ||||||||||| ||||    
T  12645901 atctctctattgctttgattttcgtgcaaatatcaactttttctttgtaaattatggttatctcaaaagttgtcaaccaaatagttgttcaaatatcact 12645802  T
Q  100 cctctaa 106  Q
    |||||||    
T  12645801 cctctaa 12645795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 10055623 - 10055521
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||| || |||||||||||||||||||||||||| || ||||| ||| || |||||||||||||| ||||| ||||||||||    
T  10055623 atctctctattgctttggtttttgtacaaataccaactttttctttgtaaattatagttgtcccataagttgtcaaccaaatggttgtttaaataacact 10055524  T
Q  100 cct 102  Q
    |||    
T  10055523 cct 10055521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 34757459 - 34757358
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataacactcc 101  Q
    |||||||| |||||||||  ||||||||||| ||||||||||| ||||| ||||||||| ||||| |||||||||||| || ||||||||||||||||||    
T  34757459 tctctattgttttggtttcagtgcaaatacctactttttctttataaattatggttgtcacaaaagttgtcaaccaaattggttgttcaaataacactcc 34757360  T
Q  102 tc 103  Q
    ||    
T  34757359 tc 34757358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 3343321 - 3343221
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||||||||||||||||| |||||||||||||| ||||| |||||||||  |||| ||||||| |||||  ||||||||||||||||    
T  3343321 atctctctattgctttggttttcgtgcaaatcccaactttttctttataaattatggttgtcttaaaagttgtcaatcaaatagttgttcaaataacact 3343222  T
Q  100 c 100  Q
    |    
T  3343221 c 3343221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3062410 - 3062509
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| |||||||||| ||||||||||| | ||||||||||||||| |||||||||    || |||||||||||||| ||||||||||||||||    
T  3062410 atctctctattgttttggtttttgtgcaaatacctattttttctttgtaaattatggttgtcatgtaagttgtcaaccaaatggttgttcaaataacact 3062509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 21822590 - 21822491
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttg-tccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||| |||| |||||||| ||||||||| ||||||||||||||| ||||||| |  |||| |||||||| ||||| ||||||||||||||||    
T  21822590 atctctctattactttgattttcgtgtaaataccaattttttctttgtaaattatggttgttttaaaagttgtcaactaaatggttgttcaaataacact 21822491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 35588882 - 35588783
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| |||||||||||||||||||||||||||||||||| ||  ||||| |||||||| ||||  ||||| ||||||||||||||||    
T  35588882 atctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattataattgtctcaaaaattatcaattaaatggttgttcaaataacact 35588783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 46532582 - 46532679
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataac 96  Q
    ||||||||||| |||||||||||||| ||||||| | ||||||||| ||||| ||||||||| ||||| |||||||||||| || |||||||||||||    
T  46532582 atctctctattgttttggttttcgtgtaaatacctaatttttctttataaattatggttgtcacaaaagttgtcaaccaaattggttgttcaaataac 46532679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 42555644 - 42555744
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||   ||||||||||| ||||| || |||||| |||| ||||| ||||||||| ||||| |||||||||||||| ||||||||||||||||    
T  42555644 atctctctattgcattggttttcgtacaaatgcctacttttcctttataaattatggttgtctcaaaagttgtcaaccaaatggttgttcaaataacact 42555743  T
Q  100 c 100  Q
    |    
T  42555744 c 42555744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 41458683 - 41458782
Alignment:
Q  8 tattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacactcctctaa 106  Q
    |||| ||||| |||| ||||||||||| ||||||||||| ||||| |||||||||    || |||||||||||||| |||||||||||||||||||||||    
T  41458683 tattgttttgatttttgtgcaaatacctactttttctttataaattatggttgtcatgtaagttgtcaaccaaatggttgttcaaataacactcctctaa 41458782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 43482603 - 43482664
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc 62  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||| |||| |||||||||    
T  43482603 atctctctattgttttggttttcgtgcaaatacctactttttctttgaaaattatggttgtc 43482664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 19786070 - 19785966
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||||||||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || |||||||||||||||||||    
T  19786070 atctctctattgctctggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcatcaaattgattgttcaaataacact 19785971  T
Q  100 cctct 104  Q
    |||||    
T  19785970 cctct 19785966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 21023108 - 21023004
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| || |||||| ||||  |||||||  ||||||||||||||  ||||||||| || ||||||||| | || |||||||||||||||||||    
T  21023108 atctctctattgttatggtttccgtgataataccacttttttctttgtaaaatatggttgtcaaataaattgtcatcaaattgattgttcaaataacact 21023009  T
Q  100 cctct 104  Q
    |||||    
T  21023008 cctct 21023004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 16980389 - 16980468
Alignment:
Q  14 tttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaa 92  Q
    ||||||||||| ||||||||||| ||||||||||||||| ||| ||||| ||||| |||||||| ||||| |||||||||    
T  16980389 tttggttttcgggcaaataccaattttttctttgtaaattatgattgtctcaaaagttgtcaactaaatggttgttcaaa 16980468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 25067303 - 25067402
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| ||||||||||| |||||||||    ||||||||||||||| |||||| ||  | ||||||||||||||||| ||||| ||||||||||    
T  25067303 atctctctattgttttggttttcatgcaaatacattttttttctttgtaaattatggttatcatataaattgtcaaccaaatggttgtttaaataacact 25067402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 33180701 - 33180598
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| |||||||||||||||||||||  | ||| ||||| ||||| ||  ||||| || || |||||||||||||| |||||||||||| |||    
T  33180701 atctctctattgttttggttttcgtgcaaatacataatttctctttataaattatcattgtctcataagttgtcaaccaaatggttgttcaaataatact 33180602  T
Q  100 cctc 103  Q
    ||||    
T  33180601 cctc 33180598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 35452564 - 35452459
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaacca-aatgattgttcaaataacac 98  Q
    |||||||||||  |||| ||| ||||||||||||  |||||||||| ||||| ||||||||| || || |||||||||| | ||||||||||||||||||    
T  35452564 atctctctattgctttgatttccgtgcaaataccttctttttctttataaattatggttgtcacacaagttgtcaaccagattgattgttcaaataacac 35452465  T
Q  99 tcctct 104  Q
    | ||||    
T  35452464 ttctct 35452459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 42926219 - 42926320
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    ||||||||||| ||||| |||  || |||||||  ||||||||||||||||| ||||||||| || ||||||||||||||| || ||||| |||||||||    
T  42926219 atctctctattgttttgatttctgtacaaatacttactttttctttgtaaattatggttgtcacataaattgtcaaccaaattggttgttaaaataacac 42926318  T
Q  99 tc 100  Q
    ||    
T  42926319 tc 42926320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 4713653 - 4713757
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    ||||||||||| | ||||||| | ||||||||||   ||||||||||||||| ||||||||| || || |||||||||||| || || ||||||||||||    
T  4713653 atctctctattgtgttggtttccatgcaaataccttatttttctttgtaaattatggttgtcacataagttgtcaaccaaattggttattcaaataacac 4713752  T
Q  99 tcctc 103  Q
    |||||    
T  4713753 tcctc 4713757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 23048387 - 23048288
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacactcct 102  Q
    |||||||| ||||||||||| ||||||||| | |||||||||||||||| ||||||||  || || |||||| | || || |||||||||||||||||||    
T  23048387 tctctattgttttggttttcatgcaaatacta-ctttttctttgtaaattatggttgtaaaataagttgtcaccaaattggttgttcaaataacactcct 23048289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 6109962 - 6109863
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaat-gatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacac 98  Q
    ||||||||||| ||||||||||||||  |||||  | |||||||||||||||  ||| |||||||| || |||||||| |||||||||||||||| ||||    
T  6109962 atctctctattgttttggttttcgtgtcaatacataatttttctttgtaaatctatgattgtccaataagttgtcaacaaaatgattgttcaaatcacac 6109863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 41399154 - 41399051
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| |||||||||||||| ||||||  | |||||||||||||||  |||||||| || ||||| | ||  ||||| ||||| ||||||||||    
T  41399154 atctctctattgttttggttttcgtgtaaatacttattttttctttgtaaattttggttgtcaaataaattataaattaaatggttgtttaaataacact 41399055  T
Q  100 cctc 103  Q
    ||||    
T  41399054 cctc 41399051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 8920658 - 8920577
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaat 81  Q
    ||||||||||| ||||| ||| |||||||||||| || |||||||| ||||| ||||||||| ||||| ||||||| |||||    
T  8920658 atctctctattgttttgatttccgtgcaaatacctacgttttctttataaattatggttgtcacaaaagttgtcaatcaaat 8920577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31844596 - 31844535
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc 62  Q
    ||||||||||| |||||||||| || |||||||| ||||||||||||||||| || ||||||    
T  31844596 atctctctattgttttggtttttgtacaaatacctactttttctttgtaaattatagttgtc 31844535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 13162999 - 13163099
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||| ||||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || |||||||||||||||||||    
T  13162999 atctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattgattgttcaaataacact 13163098  T
Q  100 c 100  Q
    |    
T  13163099 c 13163099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 39231719 - 39231616
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatga-ttgttcaaataacac 98  Q
    |||||||||||  | |||||| ||||| ||||||| |||||||||||||||  ||||||||| || || ||||| ||||||| | |||||||||||||||    
T  39231719 atctctctattgctatggtttccgtgccaataccacctttttctttgtaaagtatggttgtcaaataagttgtc-accaaattagttgttcaaataacac 39231621  T
Q  99 tcctc 103  Q
    |||||    
T  39231620 tcctc 39231616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 13906448 - 13906342
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| || |||||| ||||| |||||||  ||||||||||||||  ||||||||| || ||||| ||| | || | ||||||||||||| |||    
T  13906448 atctctctattgttatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataaattatcaccaaattaattgttcaaataagact 13906349  T
Q  100 cctctaa 106  Q
    || ||||    
T  13906348 ccactaa 13906342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 23680028 - 23679930
Alignment:
Q  2 tctctctattattttggttttcgtgcaaataccaactttttctttgtaaat-gatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacac 98  Q
    |||||||||| |||| |||||||||   ||||| |||||||||||||||||  ||||||||| || || |||||||||||||| | |||||||| ||||    
T  23680028 tctctctattgttttagttttcgtgtttatacctactttttctttgtaaatcaatggttgtcaaagaagttgtcaaccaaatggtggttcaaatgacac 23679930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 26041276 - 26041207
Alignment:
Q  36 actttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacactcctct 104  Q
    ||||||||||||||||| ||||||||| || || |||||| | || ||||||||||||||| ||||||||    
T  26041276 actttttctttgtaaattatggttgtcaaataagttgtcaccaaattgattgttcaaataatactcctct 26041207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 32815248 - 32815352
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | ||||||  |||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || || ||||||||||||||||    
T  32815248 atctctctattgctatggtttctgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 32815347  T
Q  100 cctct 104  Q
    |||||    
T  32815348 cctct 32815352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 38779735 - 38779631
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||| ||||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || ||| | |||||||||||||    
T  38779735 atctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgtcatcaaattgactattcaaataacact 38779636  T
Q  100 cctct 104  Q
    |||||    
T  38779635 cctct 38779631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 40231697 - 40231609
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttg-tccaaaaattgtcaaccaaatgattgtt 88  Q
    ||||||||||| ||||||||||||| |||||| | | ||||| |||||||||  || ||| |||| || |||||||||||||| |||||    
T  40231697 atctctctattgttttggttttcgtacaaatatctattttttttttgtaaattttgtttgttccataagttgtcaaccaaatggttgtt 40231609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 4225832 - 4225931
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgt-aaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacac 98  Q
    ||||||||||| ||||||||||||||  |||||| ||||||||||| | |||  ||||||||| || || |||||| | |||  ||||||||||||||||    
T  4225832 atctctctattgttttggttttcgtgtcaatacctactttttctttataaaactatggttgtcaaataagttgtcacctaaaaaattgttcaaataacac 4225931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 37808755 - 37808652
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| || || ||| ||||| |||||||  ||||||||||||||  ||||||||| || |  |||||| | || || ||||||||||||||||    
T  37808755 atctctctattgttatgctttccgtgccaataccacttttttctttgtaaaatatggttgtcaaatacgttgtcaccaaattggttgttcaaataacact 37808656  T
Q  100 cctc 103  Q
    ||||    
T  37808655 cctc 37808652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 10700129 - 10700079
Alignment:
Q  49 aaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacac 98  Q
    |||| |||||||||| |||| ||||||| ||||||||||||||||||||||    
T  10700129 aaattatggttgtcccaaaagttgtcaatcaaatgattgttcaaataacac 10700079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 11564973 - 11565072
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt--ccaaaaattgtcaaccaaatgattgttcaaataacac 98  Q
    |||||||||||  |||| ||||||||| |||||| | |||||||||| |||| ||||||||  ||| || |||||||| ||| | |||||||||||||||    
T  11564973 atctctctattgctttgattttcgtgc-aatacctattttttctttgcaaattatggttgtccccataagttgtcaactaaa-ggttgttcaaataacac 11565070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 39029939 - 39030030
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatg-atggttgtccaaaaattgtcaaccaaatgattgttcaaataaca 97  Q
    |||||||||||| |||||||||| ||| |||||  | ||||| |||||||||  ||| |||||      |||||||||||||||||||||||||||||    
T  39029939 atctctctattactttggttttcatgccaatacttattttttatttgtaaatctatgattgtc------ttgtcaaccaaatgattgttcaaataaca 39030030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 46829559 - 46829653
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaa-tgatggttgtccaa-aaattgtcaaccaaatgattgttcaaat 93  Q
    |||||||||||  |||| ||||||||| || ||| |||||||||||||||| | ||||||||| || || ||||| | |||||| ||||||||||    
T  46829559 atctctctattgctttgattttcgtgccaaaacctactttttctttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaat 46829653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 47500688 - 47500786
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacac 98  Q
    ||||||||||| |||| ||||||||| |||||   | ||||||||||||||| ||| ||||| || || || || |||||||| ||||| |||||||||    
T  47500688 atctctctattgttttagttttcgtgtaaataaatattttttctttgtaaattatgattgtcgcataagttatcgaccaaatggttgttgaaataacac 47500786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3293209 - 3293270
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc 62  Q
    |||||||||||  |||| ||||| |||||||||| ||||||||||| ||||| || ||||||    
T  3293209 atctctctattgctttgattttcatgcaaatacctactttttctttataaattatagttgtc 3293270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20482607 - 20482668
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc 62  Q
    ||||||||||| |||||||||  || |||||||| | |||||| |||||||| |||||||||    
T  20482607 atctctctattgttttggtttatgtacaaatacctattttttccttgtaaattatggttgtc 20482668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 40353344 - 40353449
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||| ||||| |||||||  ||||||||||||||  |||||| || || || || ||| | || ||||||||||||||| |||    
T  40353344 atctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttttcaaataagttatcacctaattgattgttcaaataatact 40353443  T
Q  100 cctcta 105  Q
    ||||||    
T  40353444 cctcta 40353449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 29162967 - 29162867
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| || |||||| ||||| |||||||  ||||||||||||||  ||  ||||| || || |||||| | || || ||||||||||||||||    
T  29162967 atctctctattgttatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaaataagttgtcaccaaattggttgttcaaataacact 29162868  T
Q  100 c 100  Q
    |    
T  29162867 c 29162867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 50328132 - 50328027
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||    
T  50328132 atctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacact 50328033  T
Q  100 cctcta 105  Q
    ||||||    
T  50328032 cctcta 50328027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 48326048 - 48326150
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaattgtcaaccaaatgattgttcaaataacactc 100  Q
    |||||||||||  |||| ||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||    
T  48326048 atctctctattgctttgattttcgtacaaataccaactttttctttgtaaattatggttgtccaaaagttgtcaaccaaatggttgttcaaataacactc 48326147  T
Q  101 ctc 103  Q
    |||    
T  48326148 ctc 48326150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 32915063 - 32914959
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttg-tccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| |||||||||||||  ||||||||||||||||    
T  32915063 atctctctattgttttggttttcgtgcaaataccaactttttctttgtaaattatgattgttccaaaagttgtcaaccaaatagttgttcaaataacact 32914964  T
Q  100 cctct 104  Q
    |||||    
T  32914963 cctct 32914959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 40316935 - 40316831
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| |||||||||||||| ||||||||||||||||    
T  40316935 atctctctattgctttggttttcgtgcaaataccaactttttctttataaattatggttgtcctaaaagttgtcaaccaaatggttgttcaaataacact 40316836  T
Q  100 cctct 104  Q
    |||||    
T  40316835 cctct 40316831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 35136924 - 35137027
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| |||| |||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  35136924 atctctctattgctttgatttttgtgcaaatacaaactttttctttgtaaattatggttgtcctaaaaattgtcaaccaaatgattgttcaaataacact 35137023  T
Q  100 cctc 103  Q
    ||||    
T  35137024 cctc 35137027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 52362562 - 52362665
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| |||||||||||||| ||||||||||||||||    
T  52362562 atctctctattgctttggttttcgtgcaaataccaactttttctttataaattatggttgtcctaaaagttgtcaaccaaatggttgttcaaataacact 52362661  T
Q  100 cctc 103  Q
    ||||    
T  52362662 cctc 52362665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 15015481 - 15015579
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaattgtcaaccaaatgattgttcaaataacactcct 102  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| ||||||||||  |||||||||||||||||||    
T  15015481 tctctattgttttggttttcgtgcaaataccaactttttctttgtaaattatggttgtcccataattatcaaccaaatagttgttcaaataacactcct 15015579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 13489742 - 13489845
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||| ||| || |||||||||||||  ||||||||||||||||    
T  13489742 atctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatggttgtcccagaagttgtcaaccaaatagttgttcaaataacact 13489841  T
Q  100 cctc 103  Q
    ||||    
T  13489842 cctc 13489845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 15705048 - 15704950
Alignment:
Q  6 tctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacactcctc 103  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| || ||||||||||| ||||||||||||||||||||    
T  15705048 tctattgttttggttttcgtgcaaataccaactttttctttataaattatggttgtcctaaaagttatcaaccaaatggttgttcaaataacactcctc 15704950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 36577403 - 36577299
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||| ||||  |||| |||||||||||||||||||||||||||| ||||| |||||||||| |||| |||||||||||||| ||||||||||||||||    
T  36577403 atctctttattgctttgattttcgtgcaaataccaactttttctttataaattatggttgtcctaaaagttgtcaaccaaatggttgttcaaataacact 36577304  T
Q  100 cctct 104  Q
    |||||    
T  36577303 cctct 36577299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 52714892 - 52714792
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||| || ||||| |||||| ||||||| |||||| ||||||||||||||||    
T  52714892 atctctctattgttttggttttcgtgcaattaccaactttttctttgtaaattattgttgtcccaaaagttgtcaatcaaatggttgttcaaataacact 52714793  T
Q  100 c 100  Q
    |    
T  52714792 c 52714792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 10890037 - 10889934
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| |||||||||| ||||||||||||||||||||||| ||||||||| ||||| |||||||||||||  ||||||||||||||||    
T  10890037 atctctctattgctttgattttcgtgcacataccaactttttctttgtaaattatggttgtcacaaaagttgtcaaccaaatagttgttcaaataacact 10889938  T
Q  100 cctc 103  Q
    ||||    
T  10889937 cctc 10889934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 34254342 - 34254239
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||| ||||  |||||||||||||||||||| |||||||||||||||||| || ||||| |||||| || ||||||||||||||||||||||||||||    
T  34254342 atctctttattgctttggttttcgtgcaaatacaaactttttctttgtaaattatagttgtcccaaaagttatcaaccaaatgattgttcaaataacact 34254243  T
Q  100 cctc 103  Q
    ||||    
T  34254242 cctc 34254239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 50781561 - 50781456
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||| ||||| ||| |||||| |||| ||||| |||||||| ||||||||||||||||    
T  50781561 atctctctattgctttggttttcgtgcaaataccaattttttctttataaattatgattgtcctaaaagttgtctaccaaatggttgttcaaataacact 50781462  T
Q  100 cctcta 105  Q
    ||||||    
T  50781461 cctcta 50781456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 33358149 - 33358041
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||| |||  |||| |||||||||||||||| ||||||||||||||||| ||||||||| || || |||||||||||||| ||||||||||||||||    
T  33358149 atctctcaattgatttgattttcgtgcaaatacccactttttctttgtaaattatggttgtcacataagttgtcaaccaaatggttgttcaaataacact 33358050  T
Q  100 cctctaact 108  Q
    ||| |||||    
T  33358049 cctgtaact 33358041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 6143777 - 6143867
Alignment:
Q  15 ttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacactcctct 104  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||  |||  ||||||||||||||||||||||||||||| ||||||    
T  6143777 ttggttttcgtgcaaatacctactttttctttgtaaattatggttgtcttaaatgttgtcaaccaaatgattgttcaaataacaatcctct 6143867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 29154860 - 29154962
Alignment:
Q  3 ctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacactcc 101  Q
    |||| |||| |||||||||||||||||||||| || |||||||||||||| || ||||| ||| || |||||||||||||| ||||||||||||||||||    
T  29154860 ctctatattgttttggttttcgtgcaaatacctacgttttctttgtaaattatcgttgtcccataagttgtcaaccaaatggttgttcaaataacactcc 29154959  T
Q  102 tct 104  Q
    |||    
T  29154960 tct 29154962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 8447816 - 8447919
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| |||| ||||| ||||||||| ||||||||||||||||||| ||| ||||| || || || ||||| ||||||||||||||||||||||    
T  8447816 atctctctattgttttagtttttgtgcaaatatcaactttttctttgtaaattatgattgtcacataagttatcaactaaatgattgttcaaataacact 8447915  T
Q  100 cctc 103  Q
    ||||    
T  8447916 cctc 8447919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 29147865 - 29147758
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    ||||||||||| ||||||||| ||||||||||   |||||| |||||||||| ||||||||| || ||||| ||||||||| ||||||||||||||||||    
T  29147865 atctctctattgttttggtttccgtgcaaatatttacttttcctttgtaaattatggttgtcacataaattatcaaccaaattgattgttcaaataacac 29147766  T
Q  99 tcctctaa 106  Q
    ||||||||    
T  29147765 tcctctaa 29147758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 46543433 - 46543329
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||| ||||||||| ||| ||||| ||  |||||| ||||||| ||||||||||| ||||||||||||||||    
T  46543433 atctctctattgctttggttttcgtgcaaatatcaacttttttttt-taaattataattgtcccaaaaattatcaaccaaatggttgttcaaataacact 46543335  T
Q  100 cctcta 105  Q
    ||||||    
T  46543334 cctcta 46543329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 50882101 - 50881997
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||| |||| |||||||||||||||  | ||||||||| ||||| ||| ||||| || |||||||||| |||||| ||||||||||||||||    
T  50882101 atctctctattactttgattttcgtgcaaatactcattttttctttataaattatgattgtcacataaattgtcaatcaaatggttgttcaaataacact 50882002  T
Q  100 cctct 104  Q
    |||||    
T  50882001 cctct 50881997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 48220135 - 48220032
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| |||| |||||||||||||||||||||||| | || |||| | ||| | || |||||||||||||||||||||||||||||||    
T  48220135 atctctctatttctttgatttttgtgcaaataccaactttttctttgaagattatggctttcccataagttgtcaaccaaatgattgttcaaataacact 48220036  T
Q  100 cctc 103  Q
    ||||    
T  48220035 cctc 48220032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 34040491 - 34040390
Alignment:
Q  1 atctctctattattttggttttcgtgcaaata--ccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataaca 97  Q
    |||||||||||| |||| ||||||||||||||  ||||||||||||||||||| || |||||| ||||||||| |||| |||||| |||||||||| |||    
T  34040491 atctctctattactttgattttcgtgcaaatataccaactttttctttgtaaacgacggttgtcccaaaaattatcaatcaaatggttgttcaaattaca 34040392  T
Q  98 ct 99  Q
    ||    
T  34040391 ct 34040390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 41507185 - 41507087
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacac 98  Q
    |||| |||||||||||||||||| ||  |||||| ||||||||||||||||| || |||||| || || |||||||||||||| |||||||||||||||    
T  41507185 atctatctattattttggttttcatgtcaatacctactttttctttgtaaattatagttgtcaaataagttgtcaaccaaatggttgttcaaataacac 41507087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 50824821 - 50824927
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||||||||| ||  |||||| ||||||||||||||||| ||||||||  || || ||||| |||||||| ||||||||||||||||    
T  50824821 atctctctattgctttggttttcatgtcaatacctactttttctttgtaaattatggttgtatcataagttgtccaccaaatggttgttcaaataacact 50824920  T
Q  100 cctctaa 106  Q
    |||||||    
T  50824921 cctctaa 50824927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 8200159 - 8200258
Alignment:
Q  5 ctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacactcctc 103  Q
    |||||||  |||||||||||||||| |||  ||||||||||||||||| |||||||| ||| || |||||||||||| |  |||||||||||||||||||    
T  8200159 ctctattgctttggttttcgtgcaactacgtactttttctttgtaaattatggttgtcccataagttgtcaaccaaaaggctgttcaaataacactcctc 8200258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 19969553 - 19969460
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaattgtcaaccaaatgattgttcaaataacactc 100  Q
    |||||||||||  ||||||||||||||| |||||||| |||||||||||||| ||||           |||||||||||||| |||||||||||||||||    
T  19969553 atctctctattgctttggttttcgtgcacataccaacgttttctttgtaaattatgg-----------ttgtcaaccaaatggttgttcaaataacactc 19969465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 47215718 - 47215616
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatga-ttgttcaaataacactcc 101  Q
    |||||||| |||| |||| |||||||||||  | ||||||||| ||||| ||||||||| ||||| || |||||||||| | ||||||||||||||||||    
T  47215718 tctctattgttttagtttccgtgcaaatacatattttttctttataaattatggttgtcacaaaagttatcaaccaaattagttgttcaaataacactcc 47215619  T
Q  102 tct 104  Q
    |||    
T  47215618 tct 47215616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 49241482 - 49241395
Alignment:
Q  15 ttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaattgtcaaccaaatgattgttcaaataacactcctct 104  Q
    |||||||||||||||||||| ||||||  ||||||||| ||| |||||  ||||  ||||| |||||| |||||||||||||||||||||    
T  49241482 ttggttttcgtgcaaatacctacttttcttttgtaaattatgattgtctcaaaa--gtcaatcaaatggttgttcaaataacactcctct 49241395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 11823037 - 11823138
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    ||||||||||||||||| ||| ||||||| || | ||| ||||||| ||||| || ||||||| | ||||||||||||||| |||| |||||||||||||    
T  11823037 atctctctattattttgatttccgtgcaactatctactatttctttataaattatcgttgtccgataaattgtcaaccaaattgatggttcaaataacac 11823136  T
Q  99 tc 100  Q
    ||    
T  11823137 tc 11823138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 7128198 - 7128302
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||| ||||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || |||||||||||||||||||    
T  7128198 atctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattgattgttcaaataacact 7128297  T
Q  100 cctct 104  Q
    |||||    
T  7128298 cctct 7128302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 35539264 - 35539164
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaattgtcaaccaaa-tgattgttcaaataacact 99  Q
    |||||||| || ||||||||| |||||||||||  ||||||||||||||||| ||  |||||  ||| |||||| ||||| | |||||||||||||||||    
T  35539264 atctctctgttgttttggtttccgtgcaaatacatactttttctttgtaaattatatttgtcacaaagttgtcagccaaattaattgttcaaataacact 35539165  T
Q  100 c 100  Q
    |    
T  35539164 c 35539164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 45417852 - 45417944
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaa 92  Q
    ||||||||||| ||||| |||||||||||||||  | ||||||||| ||||| ||||||||| || || ||||||| |||||| |||||||||    
T  45417852 atctctctattgttttgattttcgtgcaaatacatattttttctttataaattatggttgtcacataagttgtcaatcaaatggttgttcaaa 45417944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 47721489 - 47721592
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| ||||||||  |||||  ||||||||||||||||| |||||||| ||| || ||||| || ||||| ||||| ||||||||||    
T  47721489 atctctctattgctttgattttcgtgtcaatacttactttttctttgtaaattatggttgtcccataagttgtccactaaatggttgtttaaataacact 47721588  T
Q  100 cctc 103  Q
    ||||    
T  47721589 cctc 47721592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 47728481 - 47728584
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| ||||||||  |||||  ||||||||||||||||| |||||||| ||| || ||||| || ||||| ||||| ||||||||||    
T  47728481 atctctctattgctttgattttcgtgtcaatacttactttttctttgtaaattatggttgtcccataagttgtccactaaatggttgtttaaataacact 47728580  T
Q  100 cctc 103  Q
    ||||    
T  47728581 cctc 47728584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 52267282 - 52267389
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    ||||||||||| |||||||||  ||||||||||| | ||||| ||| ||||| ||||||| | |||||  |||||| |||| || |||||||||||||||    
T  52267282 atctctctatttttttggtttctgtgcaaatacctattttttatttataaattatggttggcacaaaagctgtcaatcaaattggttgttcaaataacac 52267381  T
Q  99 tcctctaa 106  Q
    ||||||||    
T  52267382 tcctctaa 52267389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 51436762 - 51436664
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaat-gatggttgtc-caaaaattgtcaaccaaatgattgttcaaataaca 97  Q
    |||||| |||| ||||||||||| ||  |||||| |||||||||||||||||  |||||||||  | || ||||||||||||| |||||||||||||||    
T  51436762 atctctttattgttttggttttcatgtcaatacctactttttctttgtaaatctatggttgtcatataagttgtcaaccaaattattgttcaaataaca 51436664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 8411709 - 8411604
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| ||||||||| ||||| |||||||  ||||||||||||||  ||||||||  || || |||||| | || || |||||||||||||||     
T  8411709 atctctctattgttttggtttccgtgccaataccacttttttctttgtaaaatatggttgttaaataagttgtcaccaaattggttgttcaaataacaca 8411610  T
Q  100 cctcta 105  Q
    ||||||    
T  8411609 cctcta 8411604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 11597718 - 11597822
Alignment:
Q  2 tctctctattattttggttttcgtgcaaataccaactttttctttgtaaat-gatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||| ||||||||||||||| |||| | || ||||||||||||||  |||||||| ||| || ||||||| ||||||  ||||||||||||||     
T  11597718 tctctctattgttttggttttcgtgctaatatctac-ttttctttgtaaatctatggttgtcccataagttgtcaagcaaatggatgttcaaataacaca 11597816  T
Q  100 cctcta 105  Q
    ||||||    
T  11597817 cctcta 11597822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 26967289 - 26967350
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc 62  Q
    ||||||||||| ||||||||| | |||||||||| ||||||||||| ||||| |||||||||    
T  26967289 atctctctattgttttggtttccatgcaaatacctactttttctttataaattatggttgtc 26967350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 25259166 - 25259230
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa 68  Q
    |||||||| ||||| ||||| |||||||||||| ||||||||| ||||| |||||||||| ||||    
T  25259166 tctctattgttttgattttcatgcaaataccaattttttctttataaattatggttgtcctaaaa 25259230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 48624956 - 48625059
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttg-tccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| ||||| |||||||||  ||||||||||| ||||| ||||||| | || || ||||||| ||||| ||| |||||||||||||    
T  48624956 atctctctattgctttgattttcatgcaaatacatactttttctttataaattatggttgtttcataagttgtcaatcaaataatt-ttcaaataacact 48625054  T
Q  100 cctct 104  Q
    |||||    
T  48625055 cctct 48625059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 3603191 - 3603294
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||| ||||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || || ||||||||||||||||    
T  3603191 atctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcatcaaattggttgttcaaataacact 3603290  T
Q  100 cctc 103  Q
    ||||    
T  3603291 cctc 3603294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 20565109 - 20565006
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||| | |||||| ||||  |||||||  ||||||||||||||  ||||||||| || || |||||| | || || ||||||||||||||||    
T  20565109 atctctctattactatggtttccgtggcaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 20565010  T
Q  100 cctc 103  Q
    ||||    
T  20565009 cctc 20565006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 51571302 - 51571239
Alignment:
Q  37 ctttttctttgtaaa-tgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacac 98  Q
    ||||||||||||||| | |||||||||| |||||||||||| |||||| |||||||||||||||    
T  51571302 ctttttctttgtaaaattatggttgtcccaaaaattgtcaatcaaatggttgttcaaataacac 51571239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 43769711 - 43769805
Alignment:
Q  14 tttggttttcgtgcaaataccaactttttctttgtaaatga-tggttgtc-caaaaattgtcaaccaaatgattgttcaaataacactcctctaa 106  Q
    |||||||||  || ||||||  ||||||||||| ||||| | |||||||| || || ||||||||||||||||| ||||||||||| ||||||||    
T  43769711 tttggtttttctgaaaatacttactttttctttataaattaatggttgtctcataagttgtcaaccaaatgattattcaaataacattcctctaa 43769805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 51466847 - 51466908
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc 62  Q
    ||||||||||| ||||| ||| ||| |||||||| ||||||||||| ||||| |||||||||    
T  51466847 atctctctattgttttgatttccgtacaaatacctactttttctttataaattatggttgtc 51466908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 9008333 - 9008409
Alignment:
Q  29 aataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacactcctct 104  Q
    |||||||  ||||||||||||||  ||||||||| || || |||||| | || ||||||||||||||||||||||||    
T  9008333 aataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattgattgttcaaataacactcctct 9008409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 33024562 - 33024462
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||| ||||| |||| ||  ||||||||||||||  ||||||||| || || |||||| | || |||||||||||||||||||    
T  33024562 atctctctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattgattgttcaaataacact 33024463  T
Q  100 c 100  Q
    |    
T  33024462 c 33024462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 38713650 - 38713754
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||| ||||  |||| |||||||||||||||| | ||||||||| ||||| ||| |||||  | || |||||| | |||||||| |||||||||||||    
T  38713650 atctctttattgctttgattttcgtgcaaatacccattttttctttataaattatgattgtcatataagttgtcagctaaatgatttttcaaataacact 38713749  T
Q  100 cctct 104  Q
     ||||    
T  38713750 tctct 38713754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 44294098 - 44294195
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacactcct 102  Q
    |||| ||| ||||| ||||||||||||||  || ||||||||| ||||| || ||||| |||||| ||||||| ||||    ||||||||||||||||||    
T  44294098 tctcaattgttttgattttcgtgcaaatattaattttttctttataaattatagttgtcccaaaagttgtcaatcaaa----tgttcaaataacactcct 44294193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 45383957 - 45383857
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggtt-gtccaaaaattgtcaaccaaatgattgttcaaataacactcct 102  Q
    |||||||||||||| ||||||||||||||   | ||||||||||||||| ||| ||  | || || || ||||| ||||| ||||||||| |||||||||    
T  45383957 tctctattattttgattttcgtgcaaatatatattttttctttgtaaattatgattatttcataagttatcaactaaatggttgttcaaacaacactcct 45383858  T
Q  103 c 103  Q
    |    
T  45383857 c 45383857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 26585866 - 26585767
Alignment:
Q  5 ctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacactcctc 103  Q
    ||||||| || |||||| ||||  |||||||  ||||||||||||||  ||||||||| || || |||||| | || || ||||||||||||||||||||    
T  26585866 ctctattgttatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgtcatcaaattggttgttcaaataacactcctc 26585767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 50433849 - 50433952
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    |||||||||||  ||||  || ||| |||||||| ||||||||||| ||||| ||||||||| || || ||||||| |||| |  |||||||||||||||    
T  50433849 atctctctattgctttgacttccgtacaaatacctactttttctttataaattatggttgtcacacaagttgtcaatcaaattcgttgttcaaataacac 50433948  T
Q  99 tcct 102  Q
    ||||    
T  50433949 tcct 50433952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 51191868 - 51191971
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| || || ||| ||||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || || |||||||||||||||     
T  51191868 atctctctattgttatgctttccgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacacc 51191967  T
Q  100 cctc 103  Q
    ||||    
T  51191968 cctc 51191971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 1852941 - 1852839
Alignment:
Q  2 tctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacactc 100  Q
    ||||||||||  | |||||| ||||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || || || ||||||||||||||    
T  1852941 tctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcatcaaattggttattcaaataacactc 1852842  T
Q  101 ctc 103  Q
    |||    
T  1852841 ctc 1852839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 4608307 - 4608341
Alignment:
Q  68 attgtcaaccaaatgattgttcaaataacactcct 102  Q
    ||||||||||||||| |||||||||||||||||||    
T  4608307 attgtcaaccaaatggttgttcaaataacactcct 4608341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 5486011 - 5486077
Alignment:
Q  36 actttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacactcc 101  Q
    ||||||||||||||||| ||||||||   | || |||||||  ||||||||||||||||||||||||    
T  5486011 actttttctttgtaaattatggttgttttataagttgtcaagtaaatgattgttcaaataacactcc 5486077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 26837560 - 26837638
Alignment:
Q  29 aataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacactcctctaa 106  Q
    |||||||  ||||||||||||||  ||||||||| || || |||||| | || || |||||||||||||||||||||||    
T  26837560 aataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctctaa 26837638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 43560322 - 43560388
Alignment:
Q  39 ttttctttgtaaatga-tggttgtc-caaaaattgtcaaccaaatgattgttcaaataacactcctc 103  Q
    ||||| |||||||| | |||||||| ||||||||||||  |||||||||||||||||||||| ||||    
T  43560322 ttttccttgtaaattagtggttgtcacaaaaattgtcactcaaatgattgttcaaataacacacctc 43560388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 48263194 - 48263160
Alignment:
Q  66 aaattgtcaaccaaatgattgttcaaataacactc 100  Q
    |||||||||| ||||||||||||||||||||||||    
T  48263194 aaattgtcaatcaaatgattgttcaaataacactc 48263160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 756936 - 757033
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataaca 97  Q
    |||||||||||  | |||||| ||||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || || ||||||||||||||    
T  756936 atctctctattgctatggtttccgtgccaataccatttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattggttgttcaaataaca 757033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 35539350 - 35539289
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc 62  Q
    |||||| |||| |||| |||| |||||||||||  | ||||||||||||||| |||||||||    
T  35539350 atctctttattgttttagtttccgtgcaaatacttaatttttctttgtaaattatggttgtc 35539289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18336226 - 18336286
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt 61  Q
    |||||||||||  |||| |||| ||||| ||||| || |||||||||||||| ||||||||    
T  18336226 atctctctattgctttgatttttgtgcagatacctaccttttctttgtaaattatggttgt 18336286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 37588666 - 37588561
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc--aaaaattgtcaaccaaatgattgttcaaataacac 98  Q
    |||||||||||  |||| ||||||||||| || |||  ||||||||||||||  |||||||||  | ||||| ||||  ||| | |||||||||||||||    
T  37588666 atctctctattgctttgattttcgtgcaa-tatcaatattttctttgtaaattttggttgtccccataaattatcaattaaaag-ttgttcaaataacac 37588569  T
Q  99 tcctctaa 106  Q
    ||||||||    
T  37588568 tcctctaa 37588561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 7e-36; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 9634427 - 9634323
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacact 99  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  9634427 atctctatattgttttggttttcgtgcaaataccaactttttctttgtaaattatggttgttcaaaaagttgtcaaccaaatgattgttcaaataacact 9634328  T
Q  100 cctct 104  Q
     ||||    
T  9634327 tctct 9634323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 32869906 - 32870010
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||    
T  32869906 atctctttattgctttggttttcgtgcaaataccaattttttctttgtaaattatggttgtcccaaaaattgtcaaccaaatggttgttcaaataacact 32870005  T
Q  100 cctct 104  Q
    |||||    
T  32870006 cctct 32870010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 2563784 - 2563884
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||| |||||| |||| |||||||||||||||||||||||||||||||    
T  2563784 atctttctattgttttggttttcgtgcaaataccaactttttctttataaattatgattgtcctaaaagttgtcaaccaaatgattgttcaaataacact 2563883  T
Q  100 c 100  Q
    |    
T  2563884 c 2563884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 13765493 - 13765584
Alignment:
Q  14 tttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacactcctct 104  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  13765493 tttggttttcgtgcaaataccaactttttatttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctct 13765584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 39213761 - 39213658
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| ||||| ||||||||||    
T  39213761 atctctctattcctttagttttcgtgcaaataccaactttttctttgtaaatgatggttgtcccaaaagttgtcaatcaaatggttgtttaaataacact 39213662  T
Q  100 cctc 103  Q
    ||||    
T  39213661 cctc 39213658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 6170710 - 6170814
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||||||| ||||| ||| ||||| |||||||||| |||| |||||||||||||| ||||||||||||||||    
T  6170710 atctctctattgctttggttttcgtgcaaataccaattttttttttataaattatggttgtcctaaaagttgtcaaccaaatggttgttcaaataacact 6170809  T
Q  100 cctct 104  Q
    |||||    
T  6170810 cctct 6170814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 6999059 - 6998955
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||| ||||| |||||||||| |||| |||||||||||||| ||||| ||||||||||    
T  6999059 atctctctattgctttggttttcgtgcaaataccaattttttctttataaattatggttgtcctaaaagttgtcaaccaaatggttgtttaaataacact 6998960  T
Q  100 cctct 104  Q
    |||||    
T  6998959 cctct 6998955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 24563008 - 24562904
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||| |||||||||| |||||||| ||||| |||||||||| |||| |||||||||||||| ||||||||||||||||    
T  24563008 atctctctattgctttggttttcgtgtaaataccaaccttttctttataaattatggttgtcctaaaagttgtcaaccaaatggttgttcaaataacact 24562909  T
Q  100 cctct 104  Q
    |||||    
T  24562908 cctct 24562904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 39449347 - 39449447
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttg-tccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||| ||||| ||||||||||    
T  39449347 atctctctattgctttgattttcgtgcaaataccaactttttctttataaatgatggttgttccaaaaattgtcaatcaaatggttgtttaaataacact 39449446  T
Q  100 c 100  Q
    |    
T  39449447 c 39449447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 35589378 - 35589275
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||| ||||| ||||  ||||| ||||||||||    
T  35589378 atctctctattgttttggttttcgtgcaaatatcaactttttctttgtaaattatggttgtcccaaaaattatcaactaaatagttgtttaaataacact 35589279  T
Q  100 cctc 103  Q
    ||||    
T  35589278 cctc 35589275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 13347806 - 13347705
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactt-tttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacac 98  Q
    |||||||||||  |||||||||||||||| ||||||||| ||| ||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||    
T  13347806 atctctctattgctttggttttcgtgcaattaccaacttatttttttgtaaattatggttgtcccaaaaattgtcaaccaaatggttgttcaaataacac 13347707  T
Q  99 tc 100  Q
    ||    
T  13347706 tc 13347705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 23352895 - 23352794
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacactcct 102  Q
    ||||||||  ||||||||||||||||||||  ||||||||||||||||| |||||||| ||| || |||||||||||||| |||||||||||||||||||    
T  23352895 tctctattgctttggttttcgtgcaaatacatactttttctttgtaaattatggttgtcccataagttgtcaaccaaatggttgttcaaataacactcct 23352796  T
Q  103 ct 104  Q
    ||    
T  23352795 ct 23352794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 7574515 - 7574619
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||| |||| |||||||||||||||| | |||||| |||||||| || ||||| ||||||||||||||||||||| ||||||||||||||||    
T  7574515 atctctctattactttgattttcgtgcaaatacctattttttccttgtaaattatagttgttccaaaaattgtcaaccaaatggttgttcaaataacact 7574614  T
Q  100 cctct 104  Q
     ||||    
T  7574615 tctct 7574619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 37105718 - 37105820
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||| ||||||  ||| ||||||||||| ||||||||||||||||||||||| ||||||||| ||||| |||||||||||||  ||||||||||||||||    
T  37105718 atctttctattgctttcgttttcgtgcacataccaactttttctttgtaaattatggttgtcacaaaagttgtcaaccaaatagttgttcaaataacact 37105817  T
Q  100 cct 102  Q
    |||    
T  37105818 cct 37105820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 40937055 - 40936950
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| |||||||||||||||| ||||||||||||||||| ||||||||| || ||||||||| | ||||| || |||||||||||||    
T  40937055 atctctctattgctttgattttcgtgcaaatacccactttttctttgtaaattatggttgtcacataaattgtcagctaaatggttattcaaataacact 40936956  T
Q  100 cctcta 105  Q
    ||||||    
T  40936955 cctcta 40936950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 42678829 - 42678934
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttt-tctttgtaaatgatggttgtccaaaaattgtcaaccaa-atgattgttcaaataacac 98  Q
    |||||||||||  |||||||| |||||||||||| |||||| ||||||||||| |||||||||  |||||||||||||||  ||||||||||||||||||    
T  42678829 atctctctattgctttggtttccgtgcaaatacctacttttttctttgtaaattatggttgtcacaaaattgtcaaccaatttgattgttcaaataacac 42678928  T
Q  99 tcctct 104  Q
    ||||||    
T  42678929 tcctct 42678934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 4061953 - 4061847
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaattgtcaaccaaatga-ttgttcaaataacact 99  Q
    ||||||||||| ||||||||| |||||||||||  ||||||||||| ||||| |||||||||  ||||||||||| ||||| | |||||| |||||||||    
T  4061953 atctctctattgttttggtttccgtgcaaatacatactttttctttataaattatggttgtcacaaaattgtcaatcaaattagttgttcgaataacact 4061854  T
Q  100 cctctaa 106  Q
    |||||||    
T  4061853 cctctaa 4061847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 15269941 - 15270045
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| |||||||||||||||| ||||||||||||||||| |||||| ||  |||| || |||||||||||  |||||||||||||||    
T  15269941 atctctctattgctttgattttcgtgcaaatacctactttttctttgtaaattatggttatcataaaagttatcaaccaaatggatgttcaaataacact 15270040  T
Q  100 cctct 104  Q
    |||||    
T  15270041 cctct 15270045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 28245808 - 28245911
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||||| | ||||||||||||||| | ||||||  ||||| |||||||||||||| ||||||||||||||||    
T  28245808 atctctctattgctttggttttcgtgcaaataccta-tttttctttgtaaattaaggttgtttcaaaagttgtcaaccaaatggttgttcaaataacact 28245906  T
Q  100 cctct 104  Q
     ||||    
T  28245907 tctct 28245911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 5054688 - 5054794
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| |||||||||||||||| ||||||||||||||||| || |||||| || || |||||||||||||  || |||||||||||||    
T  5054688 atctctctattgctttgattttcgtgcaaatacctactttttctttgtaaattattgttgtcacataagttgtcaaccaaatagttattcaaataacact 5054787  T
Q  100 cctctaa 106  Q
     ||||||    
T  5054788 tctctaa 5054794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 22525984 - 22525887
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacactc 100  Q
    ||||||||  |||| ||||||||||||| || ||||||||||||||||| ||||||||| ||||| || |||| |||||| |||||||||||||||||    
T  22525984 tctctattgctttgattttcgtgcaaatgcctactttttctttgtaaattatggttgtctcaaaagttatcaatcaaatggttgttcaaataacactc 22525887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 2221073 - 2221176
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| ||| |||||||||||| ||||||||||| ||||| |||||| || || || |||||||| |||| |||||||||||||||||    
T  2221073 atctctctattgctttgatttccgtgcaaatacctactttttctttataaattatggttatcacataagttgtcaacaaaattattgttcaaataacact 2221172  T
Q  100 cctc 103  Q
    ||||    
T  2221173 cctc 2221176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 10711804 - 10711907
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttg-tccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||| ||||||| | ||||||||||||||| ||| ||| | ||||| || ||||||||||  ||||||||||||||||    
T  10711804 atctctctattgctttggttttcgtgtaaatacctattttttctttgtaaattatgattgtttcaaaagttatcaaccaaatagttgttcaaataacact 10711903  T
Q  100 cctc 103  Q
    ||||    
T  10711904 cctc 10711907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 3012825 - 3012739
Alignment:
Q  19 ttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacactcctct 104  Q
    |||| ||||||||||| |||||||||||  |||| |||||||||| | || |||||||||||||| |||||||||||||||||||||    
T  3012825 tttttgtgcaaatacctactttttctttaaaaattatggttgtcccataagttgtcaaccaaatggttgttcaaataacactcctct 3012739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 29712058 - 29712160
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaattgtcaaccaaatgattgttcaaataacactc 100  Q
    |||||||||||  |||||||||  |||||||||| ||||||||||||||||| |||||||||    || | ||||||||||| |||||||||||||| ||    
T  29712058 atctctctattgctttggtttttatgcaaatacctactttttctttgtaaattatggttgtcatgtaagtttcaaccaaatggttgttcaaataacagtc 29712157  T
Q  101 ctc 103  Q
    |||    
T  29712158 ctc 29712160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 34119643 - 34119537
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| ||||| ||||||||  |||||  ||||||||||||||||| |||  |||| || || |||||||||||||| |||||||||| |||||    
T  34119643 atctctctattgttttgattttcgtgtgaatacttactttttctttgtaaattatgagtgtctcataagttgtcaaccaaatggttgttcaaattacact 34119544  T
Q  100 cctctaa 106  Q
    |||||||    
T  34119543 cctctaa 34119537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 36644038 - 36643972
Alignment:
Q  38 tttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacactcctc 103  Q
    ||||||||||||||| |||||||||| | ||||||||||||||||| ||||||||||||||||||||    
T  36644038 tttttctttgtaaattatggttgtcccataaattgtcaaccaaatggttgttcaaataacactcctc 36643972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 4023340 - 4023239
Alignment:
Q  2 tctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacactc 100  Q
    ||||||||||  ||||||||||||| ||| ||  || |||||||||||||| ||| ||||| || ||||||||||||||||| ||||| |||||||||||    
T  4023340 tctctctattgctttggttttcgtgtaaagacttacattttctttgtaaattatgattgtctcataaattgtcaaccaaatggttgttgaaataacactc 4023241  T
Q  101 ct 102  Q
    ||    
T  4023240 ct 4023239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 9377536 - 9377633
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataaca 97  Q
    |||||||||||  ||||||||||||||||||| | ||||||||||||||||| |||  |||| || || |||||||| ||||| ||||||||||||||    
T  9377536 atctctctattgctttggttttcgtgcaaatatctactttttctttgtaaattatgactgtctcataagttgtcaactaaatggttgttcaaataaca 9377633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 18876912 - 18876807
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    |||||||||||  |||||||| |||||||||||| ||||||||||| ||||| ||||||||| || || |||||||| ||| | |||||||||||| |||    
T  18876912 atctctctattgctttggtttccgtgcaaatacctactttttctttataaattatggttgtcacacaagttgtcaactaaattaattgttcaaatatcac 18876813  T
Q  99 tcctct 104  Q
    ||||||    
T  18876812 tcctct 18876807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 36212051 - 36211946
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||| |||| ||||||||||||||   ||||||||||| ||||| ||| ||||| || || || ||||||||||| ||||||||||||||||    
T  36212051 atctctctattactttgattttcgtgcaaatatttactttttctttataaattatgattgtcacataatttatcaaccaaatggttgttcaaataacact 36211952  T
Q  100 cctcta 105  Q
    | ||||    
T  36211951 catcta 36211946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 44254693 - 44254780
Alignment:
Q  13 ttttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| |||||||| | ||||||||||||||||| |||||| | ||| || ||||||| |||||| ||||||||||||||||    
T  44254693 ttttggttttcctgcaaataactactttttctttgtaaattatggttatcccataagttgtcaatcaaatggttgttcaaataacact 44254780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 25881624 - 25881726
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||| ||  ||||||||||||  ||||||| | ||||||||||||||| |||| |||  ||||| |||||||||||||| |||||||||||| |||    
T  25881624 atctctctgttgctttggttttcgtataaatacctattttttctttgtaaattatggctgtttcaaaagttgtcaaccaaatggttgttcaaataagact 25881723  T
Q  100 cct 102  Q
    |||    
T  25881724 cct 25881726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 16677753 - 16677852
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggt---tgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||  |||||||||||||||||||  || ||||||||| ||||| |||||   |||  ||||| |||||||||||||||||||||||||||||||    
T  16677753 tctctattgctttggttttcgtgcaaatattaattttttctttataaattatggtaattgtttcaaaagttgtcaaccaaatgattgttcaaataacact 16677852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 41586647 - 41586554
Alignment:
Q  14 tttggttttcgtgcaaataccaactttttctttg-taaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacactcctcta 105  Q
    ||||||||||||||||||||  ||||||| |||| ||||| |||||||| ||| || |||||||| ||||| |||||||||||||||| |||||    
T  41586647 tttggttttcgtgcaaatacttactttttttttggtaaattatggttgttccataagttgtcaactaaatggttgttcaaataacacttctcta 41586554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 11091338 - 11091247
Alignment:
Q  13 ttttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacactcctc 103  Q
    ||||| ||||| || ||||||| |||||||| |||||||| ||||||||| || ||||| ||||||||||  ||||||||||||||| ||||    
T  11091338 ttttgattttcttgtaaatacctactttttccttgtaaattatggttgtctcataaattatcaaccaaattgttgttcaaataacacccctc 11091247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 7664056 - 7663960
Alignment:
Q  2 tctctctattattttggttttcgtgcaaataccaactttttctttgtaaatg-atggttgtccaaaaattgtcaaccaaatgattgttcaaataacac 98  Q
    ||||||||||  ||||||||| |||  ||||||  ||||||||||||||||  |||||||||  |||||||||| | |||||||||||||||||||||    
T  7664056 tctctctattgctttggtttttgtgtcaatacct-ctttttctttgtaaatttatggttgtcataaaattgtcacctaaatgattgttcaaataacac 7663960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 34431814 - 34431721
Alignment:
Q  7 ctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||| |||| |||||||| || ||| | ||||||||||||||| | ||||||||| |  || || ||||||||||||||||||||||||||||    
T  34431814 ctattgttttagttttcgtacacatatctactttttctttgtaagttatggttgtcacgtaagttatcaaccaaatgattgttcaaataacact 34431721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12498627 - 12498548
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaattgtcaaccaaat 81  Q
    ||||||||||| | |||||||||||||||||||| | ||||||||||||||| ||| |||||  | |||||||||| ||||    
T  12498627 atctctctattgtcttggttttcgtgcaaataccta-tttttctttgtaaattatgattgtcacataattgtcaactaaat 12498548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 14233710 - 14233610
Alignment:
Q  1 atctctctattattttggttttcgtgcaaatacc-aactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacac 98  Q
    |||||||||||  ||||||||| |||||||||   |||||||||||||||||| |||||||||    || |||||||| ||||| |||||||||||||||    
T  14233710 atctctctattgctttggtttttgtgcaaatatttaactttttctttgtaaattatggttgtcttgtaagttgtcaacaaaatggttgttcaaataacac 14233611  T
Q  99 t 99  Q
    |    
T  14233610 t 14233610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 42372560 - 42372664
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaattgtcaaccaaa-tgattgttcaaataacact 99  Q
    |||||||||||  |||| ||| |||||||||||| || |||||| ||||||| |||| ||||  | | |||| ||||||| |||||||||||||||||||    
T  42372560 atctctctattcctttgatttccgtgcaaatacctaccttttctctgtaaattatggctgtcagagagttgttaaccaaattgattgttcaaataacact 42372659  T
Q  100 cctct 104  Q
     ||||    
T  42372660 tctct 42372664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 11167503 - 11167404
Alignment:
Q  8 tattattttggttttcgtgcaaatacc-aactttttctttgtaaatgatggttg-tccaaaaattgtcaaccaaatgattgttcaaataacactcctcta 105  Q
    ||||||||||||||| ||||||||||| |  ||||||||||||||| ||||||| | || || || |||| |||||| ||||||||||||| || |||||    
T  11167503 tattattttggtttttgtgcaaatacctatttttttctttgtaaattatggttgttacataagttatcaagcaaatggttgttcaaataactcttctcta 11167404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 42866830 - 42866933
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| | |||||||||||| | ||||||||||||||||| ||| ||||| |  || ||||| | |||||| ||||| ||||||||||    
T  42866830 atctctctattgctttgatcttcgtgcaaatatccactttttctttgtaaattatgattgtcacgtaagttgtcgatcaaatggttgttaaaataacact 42866929  T
Q  100 cctc 103  Q
    ||||    
T  42866930 cctc 42866933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 36802976 - 36803080
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt--ccaaaaattgtcaaccaaatgattgttcaaataacac 98  Q
    |||||||||||| |||| |||| ||||||||||| | | |||||||  |||| ||||||||  ||| || |||||||  ||| |||||||||||||||||    
T  36802976 atctctctattactttgatttttgtgcaaatacctattctttctttacaaattatggttgtccccataagttgtcaattaaa-gattgttcaaataacac 36803074  T
Q  99 tcctct 104  Q
    ||||||    
T  36803075 tcctct 36803080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 42430731 - 42430828
Alignment:
Q  2 tctctctattattttggttttcgtgcaaataccaactttttctttgtaaa-tgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacac 98  Q
    |||||||||| ||||||||| ||||  |||||| |||||| ||||||||| | |||||||| |||||| ||||||  |||||| |||||||||||||||    
T  42430731 tctctctattgttttggtttccgtgtcaatacctactttt-ctttgtaaacttatggttgttccaaaagttgtcacacaaatggttgttcaaataacac 42430828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 7648470 - 7648570
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttg-tccaaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    ||||||||||| |||||||||| ||||||||| |  |||||||||||||||| ||| ||| | || || || ||||||||| || |||||||||||||||    
T  7648470 atctctctattgttttggtttttgtgcaaata-cttctttttctttgtaaattatgattgttgcataagttatcaaccaaattggttgttcaaataacac 7648568  T
Q  99 tc 100  Q
    ||    
T  7648569 tc 7648570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 17898225 - 17898120
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    |||||||||||  |||| ||| ||||||| || | ||| ||||||||||||| |||||| ||| | || |||||||||||| || | |||||||||||||    
T  17898225 atctctctattgctttgatttccgtgcaactaactactatttctttgtaaattatggttatccgataagttgtcaaccaaattggtggttcaaataacac 17898126  T
Q  99 tcctct 104  Q
    ||||||    
T  17898125 tcctct 17898120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 18177020 - 18177120
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||| ||||| |||| ||  ||||||||||||||  ||||||||| || || |||||| | || |||||||||||||||||||    
T  18177020 atctctctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattgattgttcaaataacact 18177119  T
Q  100 c 100  Q
    |    
T  18177120 c 18177120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 35705608 - 35705672
Alignment:
Q  36 actttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||||||||| ||||||||  || ||||||||| | || |||||||||||||||||||    
T  35705608 actttttctttgtaaattatggttgttaaataaattgtcaccaaattgattgttcaaataacact 35705672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 7552654 - 7552741
Alignment:
Q  18 gttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacactcctct 104  Q
    |||| ||||| |||||||   |||||||||||||  ||| ||||| || ||||||||| | || ||||||||||||||||||||||||    
T  7552654 gtttccgtgccaataccactattttctttgtaaaatatgattgtcaaataaattgtcaccaaattgattgttcaaataacactcctct 7552741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 29051645 - 29051542
Alignment:
Q  2 tctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacactc 100  Q
    ||||||||||  | |||||| ||||| |||||||  ||||||||||||||  ||||||||| || || || ||| | || || |||||||||||||||||    
T  29051645 tctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttatcaccaaattggttgttcaaataacactc 29051546  T
Q  101 ctct 104  Q
    ||||    
T  29051545 ctct 29051542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 36517311 - 36517378
Alignment:
Q  36 actttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacactcct 102  Q
    ||||||||||||||||| ||| |||| |||||| || |||| |||||  |||||||||||||||||||    
T  36517311 actttttctttgtaaattatgattgtcccaaaagttatcaatcaaatagttgttcaaataacactcct 36517378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 1415992 - 1415930
Alignment:
Q  38 tttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||| ||||| |||||||||| | ||||| ||||| |||| |||||||||||||||||    
T  1415992 tttttctttataaattatggttgtcctataaattatcaactaaataattgttcaaataacact 1415930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 4139298 - 4139236
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc 63  Q
    |||||||||||| |||||||||||||||  || | || |||||||||||||| ||| ||||||    
T  4139298 atctctctattactttggttttcgtgcatgtagctacattttctttgtaaattatgattgtcc 4139236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 6895977 - 6896035
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc 62  Q
    |||||||| ||||| |||  ||||||||||  ||||||||||||||||| |||||||||    
T  6895977 tctctattgttttgatttctgtgcaaatacttactttttctttgtaaattatggttgtc 6896035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 433958 - 434035
Alignment:
Q  29 aataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacactcctcta 105  Q
    |||||||  ||||||||||||||  ||||||||| || || ||||||   || |||||||||||||||||||||||||    
T  433958 aataccacttttttctttgtaaagtatggttgtcaaataagttgtcacaaaattgattgttcaaataacactcctcta 434035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20911881 - 20911942
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc 62  Q
    |||||||||||  |||||||| |||||||||| | | ||||||||||||||  |||||||||    
T  20911881 atctctctattgctttggtttccgtgcaaatatctattttttctttgtaaaatatggttgtc 20911942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30546361 - 30546320
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaacttttt 42  Q
    ||||||||||| ||||||||||| |||||||||| |||||||    
T  30546361 atctctctattgttttggttttcatgcaaatacctacttttt 30546320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 31389664 - 31389733
Alignment:
Q  38 tttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacactcctctaa 106  Q
    ||||||||||||| | ||||||||| || || |||||| | || || |||||||||||||||||||||||    
T  31389664 tttttctttgtaagttatggttgtcaaataagttgtcatcaaattggttgttcaaataacactcctctaa 31389733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 670463 - 670359
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | || ||| ||||  |||||||  ||||||||||||||  ||||||||| || || |||||| | || || ||||||||||||||||    
T  670463 atctctctattgctatgatttccgtgtcaataccatttttttctttgtaaaatatggttgtcaaataagttgtcatcaaattggttgttcaaataacact 670364  T
Q  100 cctct 104  Q
    |||||    
T  670363 cctct 670359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 34215385 - 34215441
Alignment:
Q  42 tctttgtaaatgatggttgtccaaaaattgtcaaccaaatgattgttcaaataacac 98  Q
    ||||| ||||| |||||||||||||| || |||   |||||||||||||||||||||    
T  34215385 tctttataaataatggttgtccaaaagttatcattgaaatgattgttcaaataacac 34215441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 12012 - 12116
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||| |||||||||||||  ||||||||||||||||    
T  12012 atctctctattgttttggttttcgtgcacataccaactttttctttgtaaattatggttgtcgcaaaagttgtcaaccaaatagttgttcaaataacact 12111  T
Q  100 cctct 104  Q
    |||||    
T  12112 cctct 12116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 19481173 - 19481069
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||| || ||||| |||||| || ||||||||||||||||||||||||||||    
T  19481173 atctctctattgttttggtcttcgtgcaaataccaactttttctttgtaaattatagttgtcccaaaagttatcaaccaaatgattgttcaaataacact 19481074  T
Q  100 cctct 104  Q
    |||||    
T  19481073 cctct 19481069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 8675424 - 8675321
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| |||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||    
T  8675424 atctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacact 8675325  T
Q  100 cctc 103  Q
    ||||    
T  8675324 cctc 8675321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 15478738 - 15478841
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttg-tccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||  ||||||||||||||||    
T  15478738 atctctcaattgttttggttttcgtgcaaatatcaactttttctttgtaaattatggttgttccaaaaattgtcaaccaaatagttgttcaaataacact 15478837  T
Q  100 cctc 103  Q
    ||||    
T  15478838 cctc 15478841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 43441818 - 43441923
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||||||||| |||||||||  |||| |||||||||||||| ||||||||||||||||    
T  43441818 atctctctattgctttggttttcgtgcaaataccaattttttctttgtaaattatggttgtcttaaaagttgtcaaccaaatggttgttcaaataacact 43441917  T
Q  100 cctcta 105  Q
    ||||||    
T  43441918 cctcta 43441923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 189694 - 189590
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||| ||||||||||||| ||||| ||| |||| |||||| |||||||||||||||||||||||||||||||    
T  189694 atctctctattgctttggttttcgtgcaaatatcaactttttctttataaattatgattgtcccaaaagttgtcaaccaaatgattgttcaaataacact 189595  T
Q  100 cctct 104  Q
    |||||    
T  189594 cctct 189590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 10649515 - 10649619
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| |||||||||| ||||||||||||||||||||||| ||||||||| ||||| |||||||||||||| ||||||||||||||||    
T  10649515 atctctctattgctttgattttcgtgcacataccaactttttctttgtaaattatggttgtcacaaaagttgtcaaccaaatggttgttcaaataacact 10649614  T
Q  100 cctct 104  Q
    |||||    
T  10649615 cctct 10649619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 32912123 - 32912221
Alignment:
Q  6 tctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacactcctc 103  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||||| ||| |||| |||||| |||||||||||||| ||||||||||||||||||||    
T  32912123 tctattgttttggttttcgtgtaaataccaactttttctttataaattatgattgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctc 32912221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 34270421 - 34270510
Alignment:
Q  15 ttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacactcctc 103  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  34270421 ttggttttcgtgcaaatacctacttttcctttgtaaattatggttgtctcaaaatttgtcaaccaaatggttgttcaaataacactcctc 34270510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 15953036 - 15952936
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| |||||||||||||||| ||||||||||||||||| ||||||||| || || |||||||||||||| ||||||||||||||||    
T  15953036 atctctctattgctttgattttcgtgcaaatacccactttttctttgtaaattatggttgtcacataagttgtcaaccaaatggttgttcaaataacact 15952937  T
Q  100 c 100  Q
    |    
T  15952936 c 15952936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 34124704 - 34124804
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacactcct 102  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||||| |||||||||  ||||||||||||  ||||| |||||||||||||||||||    
T  34124704 tctctattgctttggttttcgtgtaaataccaactttttctttgtaaattatggttgtcttaaaaattgtcaattaaatggttgttcaaataacactcct 34124803  T
Q  103 c 103  Q
    |    
T  34124804 c 34124804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 41175697 - 41175593
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| | |||||||||||||| ||||||||||||||||| ||||||||| || || |||||||||||||| ||||||||||||||||    
T  41175697 atctctctattgctttgatcttcgtgcaaatacccactttttctttgtaaattatggttgtcacataagttgtcaaccaaatggttgttcaaataacact 41175598  T
Q  100 cctct 104  Q
    |||||    
T  41175597 cctct 41175593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 18397156 - 18397053
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttg-tccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||||| | ||||||||||||||| ||  ||| |||||||||| |||||||||| ||||||||||||||| |    
T  18397156 atctctctattgctttggttttcgtgcaaatacctattttttctttgtaaattataattgttccaaaaattatcaaccaaataattgttcaaataacatt 18397057  T
Q  100 cctc 103  Q
    ||||    
T  18397056 cctc 18397053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 38704175 - 38704084
Alignment:
Q  14 tttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacactcctct 104  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| |||||| |||| || |||||| |||||||||||||||| ||||    
T  38704175 tttgattttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgttaatcaaatggttgttcaaataacacttctct 38704084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 19839974 - 19839872
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacactcct 102  Q
    ||||||||  ||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||| || ||||||||||  ||||||||||||||| |||    
T  19839974 tctctattgctttggttttcgtgcaaatatcaattttttctttgtaaattatggttgtcccaaaagttatcaaccaaatagttgttcaaataacacgcct 19839875  T
Q  103 cta 105  Q
    |||    
T  19839874 cta 19839872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 43214050 - 43213947
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttg-tccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||| |||| |||||||||||||||||||||| | ||||||||| ||||| || |||| |  |||| |||||||||||||| ||||||||||||||||    
T  43214050 atctctttattgttttggttttcgtgcaaatacctattttttctttataaattatagttgttttaaaagttgtcaaccaaatggttgttcaaataacact 43213951  T
Q  100 cctc 103  Q
    ||||    
T  43213950 cctc 43213947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 9581659 - 9581739
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaattgtcaaccaaat 81  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||||||||||| |||||||||  ||| ||||||| |||||    
T  9581659 atctctctattgttttggtttccgtgcaaatacctactttttctttgtaaattatggttgtcacaaagttgtcaatcaaat 9581739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 10659094 - 10658991
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||| | | ||||||||| ||||| | |||||| |||||| ||||||| |||||| ||||||||||||||||    
T  10659094 atctctctattgctttggttttcgtgcaaatatcta-tttttctttataaattacggttgtgccaaaagttgtcaatcaaatggttgttcaaataacact 10658996  T
Q  100 cctct 104  Q
    |||||    
T  10658995 cctct 10658991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 15008541 - 15008437
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| |||||||||||||||||||| | ||||||  ||||||||| ||  ||||| || || ||||||||||||| |||||||||||||||||    
T  15008541 atctctctattgttttggttttcgtgcaaatatctacttttcttttgtaaattattattgtcacataagttgtcaaccaaataattgttcaaataacact 15008442  T
Q  100 cctct 104  Q
     ||||    
T  15008441 tctct 15008437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 1839336 - 1839238
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacac 98  Q
    |||| |||||| |||||||||||||||||||| | | ||||||||||||||| |||||||| ||| ||||| |||||||||||  | ||||||||||||    
T  1839336 atctttctattgttttggttttcgtgcaaatatctattttttctttgtaaattatggttgtcccataaattatcaaccaaatggcttttcaaataacac 1839238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 9226380 - 9226481
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    ||||||||||| ||||| ||| |||||||||||  ||||||||||||||||| ||  ||||| ||||| |||||||||||| || |||||||||||||||    
T  9226380 atctctctattgttttgatttccgtgcaaatacttactttttctttgtaaattataattgtcacaaaagttgtcaaccaaattggttgttcaaataacac 9226479  T
Q  99 tc 100  Q
    ||    
T  9226480 tc 9226481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 189563 - 189521
Alignment:
Q  62 ccaaaaattgtcaaccaaatgattgttcaaataacactcctct 104  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  189563 ccaaaaattgtcaaccaaatgattgttcaaataacactcctct 189521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 3640188 - 3640086
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||| ||||||  |||| ||||| |||||||||| ||||||||||| ||||| ||||||||| || || |||||||| ||||| | ||||||||||||||    
T  3640188 atctttctattgctttgattttcatgcaaatacccactttttctttataaattatggttgtcacataagttgtcaactaaatggtagttcaaataacact 3640089  T
Q  100 cct 102  Q
    |||    
T  3640088 cct 3640086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 30004767 - 30004685
Alignment:
Q  16 tggttttcgtgcaaataccaactttttctttgtaaatgatggttg-tccaaaaattgtcaaccaaatgattgttcaaataaca 97  Q
    |||||||||| || ||||| ||||||||||||||||| || |||| ||||||| |||||||||||| | ||||||||||||||    
T  30004767 tggttttcgttcacatacctactttttctttgtaaattatagttgttccaaaagttgtcaaccaaacggttgttcaaataaca 30004685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 41724272 - 41724370
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataacactc 100  Q
    |||||||||||||||||| |||| ||||||| | ||||||||||||||| ||| || || || |||||||||| |||| || ||||||| |||||||||    
T  41724272 tctctattattttggtttccgtgtaaatacctattttttctttgtaaattatgattatcacataaattgtcaatcaaattggttgttcagataacactc 41724370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 6446506 - 6446409
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacactc 100  Q
    ||||||||  ||| |||||||| |||||||  | ||||| ||||||||| |||||||| |||||| |||||||||||||  ||||||||||| |||||    
T  6446506 tctctattgcttttgttttcgtacaaatacatattttttttttgtaaattatggttgttcaaaaaattgtcaaccaaattgttgttcaaatatcactc 6446409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 9939423 - 9939318
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaa-tgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacac 98  Q
    |||||||||||  |||| ||||||||| || ||| |||||| ||||||||| | ||||||||| || |||||||| | |||||| |||||||||||||||    
T  9939423 atctctctattgctttgattttcgtgccaaaacctacttttcctttgtaaatttatggttgtcaaataaattgtctatcaaatggttgttcaaataacac 9939324  T
Q  99 tcctct 104  Q
     |||||    
T  9939323 acctct 9939318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 6292201 - 6292304
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||||||||| ||||||| |||||||| | | |||||||| |||| ||||||||||   ||||||||||  ||| | ||||| ||||||||||    
T  6292201 atctctctattattttgattttcgtacaaatacctattatttctttgcaaattatggttgtcctttaaattgtcaattaaa-ggttgtttaaataacact 6292299  T
Q  100 cctct 104  Q
    |||||    
T  6292300 cctct 6292304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 16437555 - 16437451
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||| ||||| |||||||  ||||||||||||||  ||| ||||| || ||||||||| | || || ||||||||||||||||    
T  16437555 atctctctattcatatggtttccgtgccaataccacttttttctttgtaaagtatgattgtcaaataaattgtcaccaaattggttgttcaaataacact 16437456  T
Q  100 cctct 104  Q
    |||||    
T  16437455 cctct 16437451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 5042328 - 5042427
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||| | |||||| ||||| |||||||  ||||||||||||||  ||||||||| || || || ||| | || |||||||||||||||||||    
T  5042328 atctctctattactatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttatcaccaaattgattgttcaaataacact 5042427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6517792 - 6517835
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttct 44  Q
    |||||||||||  |||||||||||||||||||||||||||||||    
T  6517792 atctctctattgctttggttttcgtgcaaataccaactttttct 6517835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 18695398 - 18695503
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaa-tgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacac 98  Q
    |||||||||||  |||| ||||||||| || ||| |||||| ||||||||| | ||||||||| || || ||||| | |||||| |||||||||||||||    
T  18695398 atctctctattgctttgattttcgtgctaaaacctacttttcctttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaataacac 18695497  T
Q  99 tcctct 104  Q
     |||||    
T  18695498 acctct 18695503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 6940141 - 6940037
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaa-tgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacac 98  Q
    |||||||||||  |||| ||||||||| || ||| |||||| ||||||||| | ||||||||| || || ||||| | |||||| |||||||||||||||    
T  6940141 atctctctattgctttgattttcgtgccaaaacctacttttcctttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaataacac 6940042  T
Q  99 tcctc 103  Q
     ||||    
T  6940041 acctc 6940037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 20770211 - 20770273
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc 63  Q
    |||||||||||  |||| ||||||||  |||||| ||||||||||||||||| ||| ||||||    
T  20770211 atctctctattgctttgattttcgtgtcaatacctactttttctttgtaaattatgattgtcc 20770273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21136343 - 21136430
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaattgtcaaccaaatgattgttcaaa 92  Q
    ||||||||||| ||||||||||  |  ||||||| |||||||||||| |||| |||||||||    | |||||||||||||| | |||||||    
T  21136343 atctctctattgttttggtttttatataaatacctactttttctttgaaaattatggttgtc----agttgtcaaccaaatggtcgttcaaa 21136430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 30640870 - 30640974
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt--ccaaaaattgtcaaccaaatgattgttcaaataacac 98  Q
    |||||||||||  |||| ||||||| |||||||| | | ||||||| ||||| ||||||||  ||| || |||||||  ||| || ||||||||||||||    
T  30640870 atctctctattgctttgattttcgtacaaatacctattctttctttataaattatggttgtccccataagttgtcaattaaagga-tgttcaaataacac 30640968  T
Q  99 tcctct 104  Q
    ||||||    
T  30640969 tcctct 30640974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18842312 - 18842251
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc 62  Q
    |||||||||||  | |||||||||||| |||||||  ||||||||||||||  |||||||||    
T  18842312 atctctctattgctatggttttcgtgccaataccacttttttctttgtaaaatatggttgtc 18842251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 37700540 - 37700644
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||| ||||| ||||| | |||||||||||||||| ||||||||| || |  |||||||| || |  ||||| ||||||||||    
T  37700540 atctctctattgctatggtttccgtgccaatacta-ctttttctttgtaaattatggttgtcaaataggttgtcaacaaattagttgtttaaataacact 37700638  T
Q  100 cctcta 105  Q
    ||||||    
T  37700639 cctcta 37700644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 2224906 - 2224970
Alignment:
Q  36 actttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||||||||| ||||||||| || || |||||| | || || ||||||||||||||||    
T  2224906 actttttctttgtaaattatggttgtcaaataagttgtcatcaaattggttgttcaaataacact 2224970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 34888800 - 34888700
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaat-gattgttcaaataacac 98  Q
    ||||||||||| ||||| ||| ||| |||||||  | || |||||| ||||| ||| || || ||||| |||||||| |||| |||||||||||||||||    
T  34888800 atctctctattgttttgatttccgtacaaatacataattattctttataaattatgattttcacaaaagttgtcaactaaattgattgttcaaataacac 34888701  T
Q  99 t 99  Q
    |    
T  34888700 t 34888700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 51465905 - 51465801
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| |||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||    
T  51465905 atctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacact 51465806  T
Q  100 cctct 104  Q
    |||||    
T  51465805 cctct 51465801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 3953466 - 3953362
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||||||||| |||||||| ||||||||||||| ||||| ||| ||||| |||||||||||||||||||||||||||||||||||||    
T  3953466 atctctctattgctttggttttcatgcaaatatcaactttttctttataaattatgattgtctcaaaaattgtcaaccaaatgattgttcaaataacact 3953367  T
Q  100 cctct 104  Q
    |||||    
T  3953366 cctct 3953362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 24482954 - 24482850
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||| |||||| |||| ||||||||| ||||||||||||||||    
T  24482954 atctctatattgttttggttttcgtgcaaataccaactttttctttgtaagttatggttgtcccaaaagttgtaaaccaaatggttgttcaaataacact 24482855  T
Q  100 cctct 104  Q
    |||||    
T  24482854 cctct 24482850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 55400079 - 55400183
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||| ||||| |||||||||| |||| |||||||||||||| ||||||||||||||||    
T  55400079 atctctctattgctttggttttcgtgcaaataccaattttttctttataaattatggttgtcctaaaagttgtcaaccaaatggttgttcaaataacact 55400178  T
Q  100 cctct 104  Q
    |||||    
T  55400179 cctct 55400183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 46852118 - 46852020
Alignment:
Q  6 tctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacactcctc 103  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||| ||| |||| |||||| |||||||||||||| ||||||||||||||||||||    
T  46852118 tctattgttttggttttcgtgcaaatatcaactttttctttgtaaattatgattgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctc 46852020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 50206961 - 50206857
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| |||||||| ||||  ||||| ||||||||||    
T  50206961 atctctctattgttttggttttcgtgcaaatatcaactttttctttgtaaattatggttgtcctaaaagttgtcaactaaatagttgtttaaataacact 50206862  T
Q  100 cctct 104  Q
    |||||    
T  50206861 cctct 50206857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 52937263 - 52937363
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||| |||| |||| ||||||||||||| ||||||||||||||| ||||||||| |||||||| ||||||||||| ||||||||||||||||    
T  52937263 atctctctattactttgatttttgtgcaaataccaattttttctttgtaaattatggttgtctcaaaaattatcaaccaaatggttgttcaaataacact 52937362  T
Q  100 c 100  Q
    |    
T  52937363 c 52937363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 24095394 - 24095294
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacactcct 102  Q
    ||||||||  ||||||||||||||||||||| ||||||||||||||||| |||||||||  |||| ||||||||||||||  ||||||||||||||||||    
T  24095394 tctctattgctttggttttcgtgcaaatacctactttttctttgtaaattatggttgtcataaaagttgtcaaccaaatggatgttcaaataacactcct 24095295  T
Q  103 c 103  Q
    |    
T  24095294 c 24095294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 39697213 - 39697112
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||| ||||||| |||||  ||||||||||||||||    
T  39697213 atctctctattgctttggttttcgtgcaaatatcaattttttctttgtaaattatggttgtcccaaaagttgtcaatcaaatagttgttcaaataacact 39697114  T
Q  100 cc 101  Q
    ||    
T  39697113 cc 39697112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 46019542 - 46019647
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttg-tccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||||||||||| |||||||| |  |||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||||||    
T  46019542 atctctctattgctttggttttcgtacaaatacctatcttttctttgtaaattatggttgttccaaaagttgtcaaccaaatggttgttcaaataacact 46019641  T
Q  100 cctcta 105  Q
     |||||    
T  46019642 actcta 46019647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 46253702 - 46253803
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| |||||| ||||||| |  ||| ||||||||||||||||    
T  46253702 atctctctattgctttggttttcgtgcaaataccaacattttctttgtaaattatggttgtcccaaaagttgtcaatc--atggttgttcaaataacact 46253799  T
Q  100 cctc 103  Q
    ||||    
T  46253800 cctc 46253803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 24480442 - 24480343
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacact 99  Q
    |||| ||||||| ||||||||| ||||||||||| ||||||||||||||||| ||| |||| |||||| || |||||||||| |||||||||||||||||    
T  24480442 atctatctattactttggtttttgtgcaaatacctactttttctttgtaaattatgattgtgcaaaaagttatcaaccaaataattgttcaaataacact 24480343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 20080152 - 20080253
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||||| ||||| ||||||||| |||||||| ||||||||| || ||||||||| |||||    
T  20080152 atctctctattgttttggtttccgtgcaaatacctactttttctttataaattatggttgtcacaaaaattatcaaccaaattggttgttcaaaaaacac 20080251  T
Q  99 tc 100  Q
    ||    
T  20080252 tc 20080253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 41281709 - 41281608
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacactcct 102  Q
    |||||||| |||||||||| |||||||| || ||||||| |||||||||  | ||||| ||| || ||||||||||||||||||||||||||||||||||    
T  41281709 tctctattgttttggtttttgtgcaaatgcctactttttttttgtaaattttagttgttccataagttgtcaaccaaatgattgttcaaataacactcct 41281610  T
Q  103 ct 104  Q
    ||    
T  41281609 ct 41281608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 24645436 - 24645542
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| ||||||||||||||||| |||| | ||||||||||||||| |||||||||  |||| ||||||||||| ||  ||||||||||| |||    
T  24645436 atctctctattgttttggttttcgtgcaagtacctattttttctttgtaaattatggttgtcataaaagttgtcaaccaagtggatgttcaaataatact 24645535  T
Q  100 cctctaa 106  Q
     ||||||    
T  24645536 tctctaa 24645542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 6999253 - 6999354
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacactcct 102  Q
    ||||||||  |||| |||||||||||||||  | |||||| |||||||| |||||||||| | || |||||||||||||| |||||||||||||||||||    
T  6999253 tctctattgctttgattttcgtgcaaatacatattttttcattgtaaattatggttgtcccataagttgtcaaccaaatggttgttcaaataacactcct 6999352  T
Q  103 ct 104  Q
    ||    
T  6999353 ct 6999354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 26672478 - 26672583
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaattgtcaaccaaa-tgattgttcaaataacact 99  Q
    ||||||||||| ||||| |||  ||||||||||  ||||||||||||||||| |||||||||  | | |||||||||||| | |||||||||||||||||    
T  26672478 atctctctattgttttgatttctgtgcaaatacttactttttctttgtaaattatggttgtc--acatttgtcaaccaaattaattgttcaaataacact 26672575  T
Q  100 cctctaac 107  Q
    ||||||||    
T  26672576 cctctaac 26672583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 21196204 - 21196303
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||| |||| |||||||||||||||  | ||||||||||||||| ||| || | ||| |||||||||| |||||| ||||||||||||||||    
T  21196204 atctctctattactttgattttcgtgcaaatacatattttttctttgtaaattatgattatcccataaattgtcaatcaaatggttgttcaaataacact 21196303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 34057944 - 34057841
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||| ||||||  |||| ||||||||||| |||||||||||||||| ||||| || ||||||| |||| ||||||| |||||| ||||||||| ||||||    
T  34057944 atctttctattgctttgtttttcgtgcaattaccaactttttctttataaattatagttgtcctaaaagttgtcaatcaaatggttgttcaaacaacact 34057845  T
Q  100 cctc 103  Q
    ||||    
T  34057844 cctc 34057841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 49761387 - 49761490
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||||||||| ||||||||||| ||||||||||| ||||| ||| |||||    || |||||||| ||||||||||||||||||||||    
T  49761387 atctctctattgctttggtttttgtgcaaatacctactttttctttataaattatgattgtcatgtaagttgtcaactaaatgattgttcaaataacact 49761486  T
Q  100 cctc 103  Q
    ||||    
T  49761487 cctc 49761490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 9158864 - 9158759
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatga-ttgttcaaataacac 98  Q
    |||| |||||| ||||||||| | || ||||||  ||||||||||||||||| ||||||||| || || ||||||||||||| | |||||||||||||||    
T  9158864 atctatctattgttttggtttccatgtaaatacttactttttctttgtaaattatggttgtcacataagttgtcaaccaaattagttgttcaaataacac 9158765  T
Q  99 tcctct 104  Q
    ||||||    
T  9158764 tcctct 9158759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 21005167 - 21005062
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||| |||  ||| ||||||||||||||| ||||||||||||| ||||| ||| |||| |||||| || ||||||||||| || |||||||| ||||    
T  21005167 atctctcaattgctttagttttcgtgcaaatatcaactttttctttataaattatgattgtcccaaaagttatcaaccaaatggttcttcaaatatcact 21005068  T
Q  100 cctcta 105  Q
    ||||||    
T  21005067 cctcta 21005062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 37927196 - 37927087
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    |||||||||||  |||||||| ||| |||||||| | ||||||||| ||||| ||||||||| || || ||||||| |||| || |||||||||||||||    
T  37927196 atctctctattgctttggtttccgtacaaatacctattttttctttataaattatggttgtcacacaagttgtcaatcaaattggttgttcaaataacac 37927097  T
Q  99 tcctctaact 108  Q
    ||||||||||    
T  37927096 tcctctaact 37927087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 23183506 - 23183597
Alignment:
Q  14 tttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacactcctct 104  Q
    ||||||||||||  |||||||||||||||||||  |||| ||||||||  || || ||||||| |||||| |||||||||||||||||||||    
T  23183506 tttggttttcgtttaaataccaactttttctttacaaattatggttgtataataagttgtcaatcaaatggttgttcaaataacactcctct 23183597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 55282657 - 55282575
Alignment:
Q  25 tgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacactcctctaa 106  Q
    |||||||||||||||||||||||||||| |  |||||| || || |||||||||||||| || |||||||||||||| |||||    
T  55282657 tgcaaataccaactttttctttgtaaattacagttgtctcataagttgtcaaccaaatggttattcaaataacactcttctaa 55282575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 36412206 - 36412307
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtc-aaccaaatgattgttcaaataacactcc 101  Q
    ||||||||  |||| |||||||||||||||  | | ||||||||||||| |||||||| ||| || ||||| ||||||||| ||||||||||||||||||    
T  36412206 tctctattgctttgattttcgtgcaaatacatattctttctttgtaaattatggttgtcccataagttgtcaaaccaaatggttgttcaaataacactcc 36412305  T
Q  102 tc 103  Q
    ||    
T  36412306 tc 36412307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 37410955 - 37411059
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||| ||||  |||| |||||| ||||||||| |||||| |||||||||| ||||||||  || |  |||||||| ||||| ||||||||||||||||    
T  37410955 atctctttattgctttgattttcgcgcaaatacctacttttactttgtaaattatggttgtttcataggttgtcaactaaatggttgttcaaataacact 37411054  T
Q  100 cctct 104  Q
    |||||    
T  37411055 cctct 37411059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 26645109 - 26645212
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacactcct 102  Q
    ||||||||  |||||||||| |||||||| | ||||||||||||||||| ||| || | ||| ||||||||| ||||||  |||||||||||| |||||     
T  26645109 tctctattgctttggttttcatgcaaatatctactttttctttgtaaattatgattatcccataaattgtcatccaaatagttgttcaaataatactccc 26645208  T
Q  103 ctaa 106  Q
    ||||    
T  26645209 ctaa 26645212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 50638342 - 50638261
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaat 81  Q
    |||||||||||  |||||||| |||||||||||| || |||||||| ||||| ||||||||| || || |||||||||||||    
T  50638342 atctctctattgctttggtttccgtgcaaatacctacattttctttataaattatggttgtcacacaagttgtcaaccaaat 50638261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 35201530 - 35201427
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||||||||  ||||| | |||||||||||||||| ||| ||||| || || |||||| | || |||||||||||||||||||    
T  35201530 atctctctattgctatggttttcgtgtcaatacta-ctttttctttgtaaattatgattgtcaaataagttgtcaccaaattgattgttcaaataacact 35201432  T
Q  100 cctct 104  Q
    |||||    
T  35201431 cctct 35201427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 37508489 - 37508386
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||| ||||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || || ||||||||||||||||    
T  37508489 atctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcatcaaattggttgttcaaataacact 37508390  T
Q  100 cctc 103  Q
    ||||    
T  37508389 cctc 37508386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 44677475 - 44677372
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||| ||||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || || ||||||||||||||||    
T  44677475 atctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 44677376  T
Q  100 cctc 103  Q
    ||||    
T  44677375 cctc 44677372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 54195420 - 54195523
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||| | | |||||||||  |||| ||  ||||||||||||||| ||||||||| || || |||||| | || || ||||||||||||||||    
T  54195420 atctctctattactatagttttcgtgtcaatatcacttttttctttgtaaattatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 54195519  T
Q  100 cctc 103  Q
    ||||    
T  54195520 cctc 54195523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 29573347 - 29573249
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaa-tgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataaca 97  Q
    |||||||||||  |||| ||||||||| || ||| |||||| ||||||||| | ||||||||| || |||||||| | |||||| ||||||||||||||    
T  29573347 atctctctattgctttgattttcgtgccaaaacctacttttcctttgtaaatttatggttgtcaaataaattgtctatcaaatggttgttcaaataaca 29573249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 10206949 - 10206860
Alignment:
Q  16 tggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacactcctct 104  Q
    |||||| ||||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || || |||||||||||||||||||||    
T  10206949 tggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctct 10206860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 29634063 - 29633958
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | || ||| |||||||||||||  ||||||||||||||  ||||||||| || |||||||||   || || |||||||||||||||     
T  29634063 atctctctattgatatgatttccgtgcaaataccacttttttctttgtaaaatatggttgtcaaataaattgtcactaaattggttgttcaaataacacc 29633964  T
Q  100 cctcta 105  Q
    ||||||    
T  29633963 cctcta 29633958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 27511807 - 27511902
Alignment:
Q  3 ctctctattattttggttttcgtgcaaataccaactttttctttgtaaatg-atggttgtccaaaaattgtcaaccaaatgattgttcaaataacac 98  Q
    ||||||||| ||||||||| ||||  |||| | |||||| ||||||||||  |||||||||||||| ||||||  |||||  |||||||||||||||    
T  27511807 ctctctattgttttggtttccgtgtcaatatctactttt-ctttgtaaatttatggttgtccaaaagttgtcacacaaattgttgttcaaataacac 27511902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 36121901 - 36122005
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | || |||| |||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || || ||||||||||||||||    
T  36121901 atctctctattgctatgatttttgtgccaataccacatttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 36122000  T
Q  100 cctct 104  Q
    |||||    
T  36122001 cctct 36122005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 51973359 - 51973256
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatga-ttgttcaaataacac 98  Q
    ||||||||||| || |||||||  ||  ||||| |  ||||||||||||||| ||||||||| || |||||||| ||||||| | |||||||||||||||    
T  51973359 atctctctattgttatggtttttatgtcaatactatttttttctttgtaaattatggttgtcaaataaattgtc-accaaattagttgttcaaataacac 51973261  T
Q  99 tcctc 103  Q
    |||||    
T  51973260 tcctc 51973256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 18741231 - 18741302
Alignment:
Q  36 actttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacactcctctaa 106  Q
    |||| |||||||||||| |||||||||| | ||||| || |||||||| ||||||||||| || ||||||||    
T  18741231 acttcttctttgtaaattatggttgtcccataaattatccaccaaatggttgttcaaatagcaatcctctaa 18741302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 54028022 - 54028125
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| || || ||| ||||  |||||||  ||||||||||||||  |||||||||||| || ||||||   || ||||| |||||||||||||    
T  54028022 atctctctattgttatgatttccgtgtcaataccacttttttctttgtaaagtatggttgtccaataagttgtcactaaattgattcttcaaataacact 54028121  T
Q  100 cctc 103  Q
    ||||    
T  54028122 cctc 54028125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 16675517 - 16675418
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaattgtcaaccaaatgattgttcaaataacactc 100  Q
    |||||| ||||  |||| ||||||||||||||   |||||||||||||||||  |||||||    || ||||||| |||||| ||||| ||||||||||     
T  16675517 atctctttattgctttgtttttcgtgcaaatatatactttttctttgtaaattgtggttgt----aagttgtcaatcaaatggttgtttaaataacactt 16675422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30909109 - 30909159
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaa 51  Q
    ||||||||||| || |||||||||||| |||||||  ||||||||||||||    
T  30909109 atctctctattgttatggttttcgtgccaataccacttttttctttgtaaa 30909159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 10465018 - 10465075
Alignment:
Q  5 ctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc 62  Q
    |||||||  ||||||||| ||||||||||| | ||||||||||||||| || ||||||    
T  10465018 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 10465075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 33795716 - 33795611
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    ||||||||||| ||||| ||| |||  |||||   ||||||||||||||||| ||||||||| |  || |||||||| ||| || ||||||||||||||     
T  33795716 atctctctattgttttgttttccgtataaataattactttttctttgtaaattatggttgtcacgtaagttgtcaactaaattggttgttcaaataacat 33795617  T
Q  99 tcctct 104  Q
    ||||||    
T  33795616 tcctct 33795611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 54694104 - 54694001
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc--caaaaattgtcaaccaaatgattgttcaaataacac 98  Q
    |||||||||||  |||| |||||||||||||||| | | |||||||  |||| |||||||||  || || |||||||  ||| || ||||||||||||||    
T  54694104 atctctctattgctttgattttcgtgcaaatacctattctttctttacaaattatggttgtcctcataagttgtcaattaaagga-tgttcaaataacac 54694006  T
Q  99 tcctc 103  Q
    |||||    
T  54694005 tcctc 54694001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 28419205 - 28419105
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcca-aaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| || |||||| | ||| |||||||  ||||||||||||||  ||||||||| |  || |||||| | || || ||||||||||||||||    
T  28419205 atctctctattgttatggtttccatgccaataccacttttttctttgtaaaatatggttgtcaagtaagttgtcaccaaattggttgttcaaataacact 28419106  T
Q  100 c 100  Q
    |    
T  28419105 c 28419105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 32767756 - 32767856
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||| ||||  ||| |||  ||||||||||||||  ||||||||| || || |||||| | || |||||||||||||||||||    
T  32767756 atctctctattgctatggtttccgtgtcaatgccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattgattgttcaaataacact 32767855  T
Q  100 c 100  Q
    |    
T  32767856 c 32767856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 39671088 - 39670984
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| || || ||| ||||  |||| ||  ||||||||||||||  ||||||||| || || |||||| | || || ||||||||||||||||    
T  39671088 atctctctattgttatgatttccgtgtcaatatcacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 39670989  T
Q  100 cctct 104  Q
    |||||    
T  39670988 cctct 39670984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 38505 - 38609
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||||||||||||| |||||||||||||||||||||||| || ||||| |||||| |||||||| ||||| ||||||||||||||||    
T  38505 atctctctattgctttggttttcgtgcgaataccaactttttctttgtaaattatagttgtcccaaaagttgtcaactaaatggttgttcaaataacact 38604  T
Q  100 cctct 104  Q
    |||||    
T  38605 cctct 38609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 31597028 - 31597131
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| ||||| ||||| || |||| |||||| ||||||||||||||||    
T  31597028 atctctctattgttttggtttttgtgcaaataccaactttttctttgtaaattatgattgtctcaaaagttatcaatcaaatggttgttcaaataacact 31597127  T
Q  100 cctc 103  Q
    ||||    
T  31597128 cctc 31597131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 12707229 - 12707335
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaac-tttttctttgtaaatgatggttgtccaaaaattg-tcaaccaaatgattgttcaaataacac 98  Q
    ||||||||||| |||||||||||||| |||||||||| ||||||||||||||| |||||||||| | || || ||||||||||| |||||||||||||||    
T  12707229 atctctctattgttttggttttcgtgtaaataccaacttttttctttgtaaattatggttgtcccataagtgctcaaccaaatggttgttcaaataacac 12707328  T
Q  99 tcctcta 105  Q
    |||||||    
T  12707329 tcctcta 12707335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 16872147 - 16872043
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| |||||||||||||| ||||||||||||||||||| |||||||| |||||| |||| ||||||||| ||||||||||||| ||    
T  16872147 atctctctattgctttgattttcgtgcaaatatcaactttttctttgtaaattatggttgtcccaaaagttgttaaccaaatggttgttcaaataaccct 16872048  T
Q  100 cctct 104  Q
    |||||    
T  16872047 cctct 16872043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 2733067 - 2733171
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaacc-aaatgattgttcaaataacac 98  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| ||||| ||| ||||| |||||||||| |||| || || |||||||||||||||    
T  2733067 atctctctattattttggtttccgtgcaaatacctactttttctttataaattatgattgtcacaaaaattgttaaccgaattggttgttcaaataacac 2733166  T
Q  99 tcctc 103  Q
    |||||    
T  2733167 tcctc 2733171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 34018892 - 34018991
Alignment:
Q  5 ctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacactcctc 103  Q
    ||||||| |||||| |||||||||| |||||||||||||||||||||| |||||||| || ||| |||| ||||||||| ||| ||||||||||||||||    
T  34018892 ctctattgttttgggtttcgtgcaattaccaactttttctttgtaaattatggttgtcccgaaagttgttaaccaaatggttgatcaaataacactcctc 34018991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 42569720 - 42569614
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||| ||||  |||| |||||||| ||||| ||||||||||||| ||||| |||||||||| ||||||| ||||||||||| |||||||||||| |||    
T  42569720 atctctttattgctttgattttcgtgtaaatatcaactttttctttataaattatggttgtcctaaaaattatcaaccaaatggttgttcaaataatact 42569621  T
Q  100 cctctaa 106  Q
    |||||||    
T  42569620 cctctaa 42569614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 9208144 - 9208249
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||||| || || || |||||| ||||| |||||||||||| || |||||||||||||||    
T  9208144 atctctctattgttttggtttacgtgcaaatacctactttttctttatatattatagttgtcacaaaagttgtcaaccaaattggttgttcaaataacac 9208243  T
Q  99 tcctct 104  Q
    ||||||    
T  9208244 tcctct 9208249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 16327143 - 16327043
Alignment:
Q  1 atctctctattattttggttttcgtgcaaatac-caactttttctttgtaaatgatggttg-tccaaaaattgtcaaccaaatgattgttcaaataacac 98  Q
    ||||||||||||||||||||||| ||||||||| | | ||||||||||||||| || |||| |||||||||| | || ||||||||||||||||||||||    
T  16327143 atctctctattattttggttttcttgcaaatacactattttttctttgtaaattatagttgttccaaaaattattaatcaaatgattgttcaaataacac 16327044  T
Q  99 t 99  Q
    |    
T  16327043 t 16327043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 30439497 - 30439394
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  |||| |||||||||||||||  | ||||||||||||||| ||||||||| || || || ||||||||||| ||||||||||||||||    
T  30439497 atctctctattgctttgattttcgtgcaaatactcattttttctttgtaaattatggttgtcacataagttatcaaccaaatggttgttcaaataacact 30439398  T
Q  100 cctc 103  Q
    ||||    
T  30439397 cctc 30439394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 36885479 - 36885375
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||| ||||  |||| ||||||||  |||||| ||||||||||||||||| |||||||| ||| || ||||| |||||||| ||||||||||||||||    
T  36885479 atctctttattgctttgattttcgtgtcaatacctactttttctttgtaaattatggttgtcccataagttgtccaccaaatggttgttcaaataacact 36885380  T
Q  100 cctct 104  Q
    |||||    
T  36885379 cctct 36885375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 29440514 - 29440409
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    ||||||||||| ||||| ||| |||||||||||  ||||||||| | ||||| ||||||||| |  |||||||||| |||| ||||||||||||||||||    
T  29440514 atctctctattgttttgatttccgtgcaaatacttactttttctgtataaattatggttgtcacgtaaattgtcaatcaaattgattgttcaaataacac 29440415  T
Q  99 tcctct 104  Q
    ||||||    
T  29440414 tcctct 29440409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 36110218 - 36110322
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| || |||||||||||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || || ||||||||||||||||    
T  36110218 atctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 36110317  T
Q  100 cctct 104  Q
    |||||    
T  36110318 cctct 36110322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 45508615 - 45508715
Alignment:
Q  8 tattattttggttttcgtgcaaataccaac-----tttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacactcc 101  Q
    ||||||||||||||||||||||||||||||     ||||| ||||||||| |||||||| ||| ||||| ||||| ||||  ||||||||||||||||||    
T  45508615 tattattttggttttcgtgcaaataccaacatttttttttttttgtaaattatggttgtcccataaattatcaactaaattgttgttcaaataacactcc 45508714  T
Q  102 t 102  Q
    |    
T  45508715 t 45508715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 7473017 - 7472919
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  ||| ||||||||||||||||| | ||||||||||||||| |||||| | | |||| |||||||||||||  ||||||||||||||||    
T  7473017 atctctctattgctttagttttcgtgcaaataccta-tttttctttgtaaattatggttattctaaaagttgtcaaccaaatagttgttcaaataacact 7472919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 36424593 - 36424477
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatga-ttgttcaaataacac 98  Q
    ||||||||||| ||||||||| |||||||||||  | ||||||||| ||||| ||||||||| ||||| || |||| ||||| | |||||||||||| ||    
T  36424593 atctctctattgttttggtttccgtgcaaatacatattttttctttataaattatggttgtcacaaaagttatcaatcaaattagttgttcaaataatac 36424494  T
Q  99 tcctctaactaattaca 115  Q
    ||| |||| || |||||    
T  36424493 tccgctaaatatttaca 36424477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41159880 - 41159820
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt 61  Q
    |||||||||||  ||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  41159880 atctctctattgctttggttttcgtgcaaatacctattttttctttgtaaattatggttgt 41159820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 42110171 - 42110071
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatga-ttgttcaaataacactcc 101  Q
    |||||||| ||||||||| | | ||||||| |||||||||||||||||| ||| | ||| || || ||||||||||||| | ||||||||||||||||||    
T  42110171 tctctattgttttggtttccatacaaatactaactttttctttgtaaattatgatcgtcacataagttgtcaaccaaattagttgttcaaataacactcc 42110072  T
Q  102 t 102  Q
    |    
T  42110071 t 42110071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 1871605 - 1871503
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| || |||||| ||||| ||||| |||||||||||||||||| ||||||||| || || |||| | | || || ||||||||||||||||    
T  1871605 atctctctattgttatggtttccgtgcgaatac-aactttttctttgtaaattatggttgtcaaataagttgtaatcaaattggttgttcaaataacact 1871507  T
Q  100 cctc 103  Q
    ||||    
T  1871506 cctc 1871503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 35031488 - 35031385
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaattgtcaaccaaa-tgattgttcaaataacact 99  Q
    |||||||||||  |||| ||| |||||||||| | ||||||||||||||||| || ||| ||  |||||||||||||||| || |||||||| ||| |||    
T  35031488 atctctctattgctttgatttccgtgcaaatatctactttttctttgtaaattatagttatcacaaaattgtcaaccaaattggttgttcaattaatact 35031389  T
Q  100 cctc 103  Q
    ||||    
T  35031388 cctc 35031385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 37597321 - 37597420
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacactcct 102  Q
    ||||||||  |||| |||||||| |||| || || |||||||||||||| |||||||||  | || |||||||| | |||||||||||||||||||||||    
T  37597321 tctctattgctttgattttcgtgtaaatccctaccttttctttgtaaattatggttgtcttataagttgtcaactatatgattgttcaaataacactcct 37597420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 4658254 - 4658145
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaacttt---------ttctttgtaaatgatggttgtcc-aaaaattgtcaaccaaatgattgttca 90  Q
    |||||||||||  ||||||||| |||||||||||||||||         |||||||||||| |||||||||| |||| |||||||  ||||| |||||||    
T  4658254 atctctctattgctttggtttttgtgcaaataccaactttttctactttttctttgtaaattatggttgtcctaaaagttgtcaattaaatggttgttca 4658155  T
Q  91 aataacactc 100  Q
    ||||||||||    
T  4658154 aataacactc 4658145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 28646752 - 28646857
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    |||||||| ||  |||||||||||| |||||| | ||||||||||| ||||| |||||| || || || ||||||| |||| || |||||||||||||||    
T  28646752 atctctctgttgctttggttttcgtacaaatatctactttttctttataaattatggttatcacataagttgtcaatcaaattggttgttcaaataacac 28646851  T
Q  99 tcctct 104  Q
    ||||||    
T  28646852 tcctct 28646857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 28651336 - 28651441
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    |||||||| ||  |||||||||||| |||||| | ||||||||||| ||||| |||||| || || || ||||||| |||| || |||||||||||||||    
T  28651336 atctctctgttgctttggttttcgtacaaatatctactttttctttataaattatggttatcacataagttgtcaatcaaattggttgttcaaataacac 28651435  T
Q  99 tcctct 104  Q
    ||||||    
T  28651436 tcctct 28651441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 22706232 - 22706128
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcca-aaaattgtcaaccaaa-tgattgttcaaataacac 98  Q
    ||||||||||| |||||| || | ||||| |||  ||||||||||||||||||||||||||| |  || ||||||| |||| || ||||| |||||||||    
T  22706232 atctctctattgttttggcttccatgcaagtacttactttttctttgtaaatgatggttgtcaagtaagttgtcaatcaaattggttgttaaaataacac 22706133  T
Q  99 tcctc 103  Q
    |||||    
T  22706132 tcctc 22706128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 23793067 - 23792983
Alignment:
Q  15 ttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacac 98  Q
    |||| ||| ||||||||| ||| | ||||||||||||| || |||||| || ||||||||||||||||| ||||| |||||||||    
T  23793067 ttggattttgtgcaaataacaattctttctttgtaaattatagttgtctcataaattgtcaaccaaatggttgttgaaataacac 23792983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 32843933 - 32843829
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||| ||||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || || ||||||||||||||||    
T  32843933 atctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 32843834  T
Q  100 cctct 104  Q
    |||||    
T  32843833 cctct 32843829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 38234087 - 38234197
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaact---ttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaa-tgattgttcaaataa 95  Q
    |||||||||||| |||||||| |||||||||||| | |   |||| ||| ||||| ||||||||| || || |||||||||||| || ||||||||||||    
T  38234087 atctctctattactttggtttccgtgcaaatacctatttgattttttttataaattatggttgtcacacaagttgtcaaccaaattggttgttcaaataa 38234186  T
Q  96 cactcctctaa 106  Q
    ||||| |||||    
T  38234187 cactcttctaa 38234197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 38708286 - 38708186
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaat-gattgttcaaataacac 98  Q
    ||||||| ||| ||||| ||| |||||||||| | | |||||||||| |||| ||||||||| || |||||||||| ||||| | |||||||||||||||    
T  38708286 atctctccattgttttgatttccgtgcaaatatctattttttctttgcaaattatggttgtcacataaattgtcaatcaaattggttgttcaaataacac 38708187  T
Q  99 t 99  Q
    |    
T  38708186 t 38708186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 7955998 - 7955895
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||| || || |||||||  ||||||||||||||  ||||||||| || || |||||| | || |||||||||||||||||||    
T  7955998 atctctctattgctatggtttccgcgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattgattgttcaaataacact 7955899  T
Q  100 cctc 103  Q
    ||||    
T  7955898 cctc 7955895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 36568067 - 36568142
Alignment:
Q  27 caaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacactcc 101  Q
    |||||||| ||||||| | ||||||| |||||||||| | || ||||||| |||||| ||||||||||||||||||    
T  36568067 caaatacctactttttttgtgtaaattatggttgtcccataagttgtcaatcaaatggttgttcaaataacactcc 36568142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 14707306 - 14707228
Alignment:
Q  29 aataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacactcctctaa 106  Q
    |||||| ||||||||||||||||| ||| ||||| || || ||||| |||||||  ||||||||||||||||| |||||    
T  14707306 aatacctactttttctttgtaaattatgattgtctcataagttgtccaccaaatagttgttcaaataacactcatctaa 14707228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 41541937 - 41542042
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||   |||||||| ||||||||||  | ||||| ||| ||||| |||||||| ||| || |||||||||||||| ||||||||| ||| ||    
T  41541937 atctctctattgcattggtttttgtgcaaatacttattttttatttataaattatggttgtcccataagttgtcaaccaaatggttgttcaaa-aacgct 41542035  T
Q  100 cctctaa 106  Q
    |||||||    
T  41542036 cctctaa 41542042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 32847674 - 32847573
Alignment:
Q  4 tctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacactcct 102  Q
    |||||||| || |||||| ||||  |||||||  ||||||||||||||  ||||||||| || || || ||| | || ||||||||||||||||||||||    
T  32847674 tctctattgttgtggtttccgtggcaataccacttttttctttgtaaagtatggttgtcaaataagttatcaccaaattgattgttcaaataacactcct 32847575  T
Q  103 ct 104  Q
    ||    
T  32847574 ct 32847573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 34591359 - 34591448
Alignment:
Q  16 tggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacactcctct 104  Q
    |||||| ||||  |||||||  ||||||||||||||  ||||||||| || || |||||| | || ||||||||||||||||||||||||    
T  34591359 tggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattgattgttcaaataacactcctct 34591448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 38958505 - 38958444
Alignment:
Q  39 ttttctttgtaaat-gatggttgt-ccaaaaattgtcaaccaaatgattgttcaaataacac 98  Q
    |||||||||||||| ||||||||| |||||||||||||   |||||||||||||||||||||    
T  38958505 ttttctttgtaaattgatggttgttccaaaaattgtcattaaaatgattgttcaaataacac 38958444  T

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Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 1633881 - 1633777
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | ||||||  |||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || || ||||||||||||||||    
T  1633881 atctctctattgctatggtttctgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 1633782  T
Q  100 cctct 104  Q
    |||||    
T  1633781 cctct 1633777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 4994461 - 4994561
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaa-atgattgttcaaataacac 98  Q
    |||||||||||  |||||||| |||||||||| | ||||||||||| ||||| |||| |||| |  || |||||||||||  || |||||||||||||||    
T  4994461 atctctctattgatttggtttccgtgcaaatatctactttttctttataaattatgggtgtcacgtaagttgtcaaccaatttggttgttcaaataacac 4994560  T
Q  99 t 99  Q
    |    
T  4994561 t 4994561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 16966865 - 16966969
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||| ||||| |||||||  ||||||||||||||  ||||||||| || || || ||| | || || ||||||||||||||||    
T  16966865 atctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttttcaccaaattggttgttcaaataacact 16966964  T
Q  100 cctct 104  Q
    |||||    
T  16966965 cctct 16966969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 9549153 - 9549090
Alignment:
Q  38 tttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacactc 100  Q
    |||| |||||||||| ||||||||| ||||| ||||||||||||| |||||| |||||| ||||    
T  9549153 ttttcctttgtaaattatggttgtctaaaaagttgtcaaccaaataattgttgaaataatactc 9549090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 45519673 - 45519736
Alignment:
Q  38 tttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacactc 100  Q
    |||||| |||||||| |||||| || || | ||||||||||||||| |||||||||||||||||    
T  45519673 tttttccttgtaaattatggttatctcatacattgtcaaccaaatggttgttcaaataacactc 45519736  T

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Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12367039 - 12366978
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc 62  Q
    |||||||||||| ||| |||| ||| |||||| | ||||||||||| ||||| |||||||||    
T  12367039 atctctctattactttagtttacgtacaaataactactttttctttataaattatggttgtc 12366978  T

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Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 103
Target Start/End: Original strand, 26000691 - 26000724
Alignment:
Q  70 tgtcaaccaaatgattgttcaaataacactcctc 103  Q
    ||||||||||||||||||||||||||||| ||||    
T  26000691 tgtcaaccaaatgattgttcaaataacacacctc 26000724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 29028952 - 29028849
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt--ccaaaaattgtcaaccaaatgattgttcaaataacac 98  Q
    |||||||||||  |||| |||| ||||||||||| | |||||||||  |||| ||| ||||  ||| ||||||||||  ||| | |||||||||||||||    
T  29028952 atctctctattgctttgatttttgtgcaaatacctattttttctttacaaattatgattgttcccataaattgtcaattaaa-ggttgttcaaataacac 29028854  T
Q  99 tcctc 103  Q
    |||||    
T  29028853 tcctc 29028849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 7478860 - 7478963
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacact 99  Q
    |||||||||||  | |||||| ||||| ||||| | |||||||||||||||| ||| ||||| || |  |||||||| || |  ||||||||||||||||    
T  7478860 atctctctattgctatggtttccgtgccaatacta-ctttttctttgtaaattatgattgtcaaataggttgtcaacaaattagttgttcaaataacact 7478958  T
Q  100 cctct 104  Q
    |||||    
T  7478959 cctct 7478963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 10644793 - 10644689
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaa-tgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacac 98  Q
    |||||||||||  |||  ||||||||| || ||| |||||| ||||||||| | ||||||||| || || ||||| | |||||| |||||||||||||||    
T  10644793 atctctctattgctttaattttcgtgccaaaacctacttttcctttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaataacac 10644694  T
Q  99 tcctc 103  Q
     ||||    
T  10644693 acctc 10644689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 11017885 - 11017989
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa-ttgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| || | |||| | ||| |||||||  ||||||||||||||  || |||||| || || |||||| | || | |||||||||||||||||    
T  11017885 atctctctattgttatcgtttccatgccaataccacttttttctttgtaaaatatagttgtcaaataagttgtcaccaaattaattgttcaaataacact 11017984  T
Q  100 cctct 104  Q
    |||||    
T  11017985 cctct 11017989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 40739903 - 40739800
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| || |||||| ||||| |||||| | ||||||||||||||  |||||| || || ||||| ||| | || || ||||| ||||||||||    
T  40739903 atctctctattgttatggtttccgtgccaatacc-attttttctttgtaaaatatggttatcaaataaattatcaccaaattggttgtttaaataacact 40739805  T
Q  100 cctct 104  Q
    |||||    
T  40739804 cctct 40739800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 11044 - 11148
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtc-caaaaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| ||||| |||||||||||||||| ||||||||||||||||| ||| ||||| || || |||||||||||| | ||||||||||||||||    
T  11044 atctctctattgttttgattttcgtgcaaatacccactttttctttgtaaattatgattgtcacataagttgtcaaccaaaaggttgttcaaataacact 11143  T
Q  100 cctct 104  Q
    |||||    
T  11144 cctct 11148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 8298 - 8361
Alignment:
Q  5 ctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaaaaa 68  Q
    |||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  8298 ctctattgctttggttttcgtgcaaatatcaactttttctttgtaaatgatggttgtcccaaaa 8361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1956 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1956
Description:

Target: scaffold1956; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 850 - 912
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtcc 63  Q
    |||||||||||||||||||||||||||||||| | | ||||||||||||||| ||||||||||    
T  850 atctctctattattttggttttcgtgcaaatatccattttttctttgtaaattatggttgtcc 912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 87 - 191
Alignment:
Q  1 atctctctattattttggttttcgtgcaaataccaactttttctttgtaaatgatggttgtccaa-aaattgtcaaccaaatgattgttcaaataacact 99  Q
    ||||||||||| || |||||||||||| |||||||  ||||||||||||||  ||||||||| || || |||||| | || || ||||||||||||||||    
T  87 atctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 186  T
Q  100 cctct 104  Q
    |||||    
T  187 cctct 191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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