View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1429_low_18 (Length: 414)

Name: NF1429_low_18
Description: NF1429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1429_low_18
NF1429_low_18
[»] chr5 (50 HSPs)
chr5 (10-209)||(38454387-38454586)
chr5 (208-385)||(20948785-20948963)
chr5 (209-385)||(20959154-20959331)
chr5 (10-206)||(38179471-38179666)
chr5 (10-206)||(38191465-38191660)
chr5 (10-206)||(38206695-38206890)
chr5 (10-206)||(38218690-38218885)
chr5 (209-385)||(19547400-19547576)
chr5 (209-345)||(19886836-19886970)
chr5 (208-345)||(4037126-4037261)
chr5 (209-345)||(13570826-13570961)
chr5 (208-345)||(37818573-37818710)
chr5 (208-345)||(30951858-30951993)
chr5 (209-345)||(30942437-30942571)
chr5 (209-345)||(37646479-37646613)
chr5 (209-345)||(34129636-34129771)
chr5 (209-345)||(22172398-22172534)
chr5 (208-348)||(18217746-18217886)
chr5 (208-348)||(21754505-21754645)
chr5 (209-348)||(21683156-21683295)
chr5 (209-348)||(21763792-21763931)
chr5 (209-348)||(31917782-31917920)
chr5 (209-348)||(18208409-18208548)
chr5 (209-385)||(204616-204790)
chr5 (236-345)||(37537396-37537502)
chr5 (236-345)||(27273356-27273463)
chr5 (91-191)||(26035851-26035951)
chr5 (209-349)||(36317416-36317555)
chr5 (207-341)||(37297959-37298092)
chr5 (10-95)||(38168411-38168495)
chr5 (10-95)||(38198609-38198693)
chr5 (208-310)||(33940325-33940427)
chr5 (209-310)||(33950725-33950826)
chr5 (97-209)||(26031017-26031128)
chr5 (208-310)||(11410063-11410165)
chr5 (209-296)||(22245634-22245721)
chr5 (208-310)||(26201559-26201661)
chr5 (208-310)||(27413153-27413255)
chr5 (209-310)||(8764320-8764421)
chr5 (209-310)||(26190978-26191079)
chr5 (97-209)||(38450340-38450453)
chr5 (209-267)||(32071486-32071545)
chr5 (208-310)||(18362282-18362384)
chr5 (208-310)||(18391239-18391341)
chr5 (202-309)||(20897977-20898082)
chr5 (280-345)||(19781568-19781631)
chr5 (228-266)||(31150152-31150190)
chr5 (228-264)||(4636548-4636584)
chr5 (208-265)||(20903757-20903818)
chr5 (209-241)||(37537360-37537392)
[»] chr4 (49 HSPs)
chr4 (208-385)||(521147-521324)
chr4 (208-385)||(518640-518818)
chr4 (209-385)||(17420255-17420432)
chr4 (252-385)||(26459353-26459486)
chr4 (209-345)||(2830960-2831094)
chr4 (208-345)||(16630507-16630643)
chr4 (208-345)||(44889993-44890128)
chr4 (209-345)||(13401741-13401875)
chr4 (208-345)||(17836341-17836476)
chr4 (209-345)||(17826951-17827085)
chr4 (209-348)||(21856848-21856987)
chr4 (209-348)||(21912711-21912850)
chr4 (208-348)||(5291862-5292002)
chr4 (208-348)||(5301521-5301661)
chr4 (211-348)||(7845695-7845831)
chr4 (208-348)||(16250416-16250556)
chr4 (208-348)||(21847256-21847396)
chr4 (208-348)||(21903119-21903259)
chr4 (208-348)||(27689182-27689322)
chr4 (209-348)||(27679528-27679667)
chr4 (209-348)||(10422753-10422891)
chr4 (208-348)||(3486401-3486541)
chr4 (209-348)||(3495725-3495864)
chr4 (209-348)||(7842812-7842951)
chr4 (208-320)||(30652665-30652776)
chr4 (208-322)||(17144727-17144840)
chr4 (208-348)||(16254205-16254345)
chr4 (208-320)||(16059369-16059479)
chr4 (209-322)||(15671076-15671189)
chr4 (209-348)||(6404783-6404919)
chr4 (208-310)||(16081234-16081336)
chr4 (209-310)||(6693223-6693324)
chr4 (209-310)||(6703629-6703730)
chr4 (211-344)||(15622071-15622206)
chr4 (209-310)||(40922848-40922949)
chr4 (209-320)||(13791987-13792098)
chr4 (209-320)||(41527296-41527406)
chr4 (206-310)||(17983823-17983928)
chr4 (209-267)||(3475043-3475100)
chr4 (208-284)||(4836988-4837065)
chr4 (208-310)||(18104375-18104478)
chr4 (209-320)||(53945054-53945165)
chr4 (208-268)||(16209914-16209975)
chr4 (242-321)||(8847658-8847737)
chr4 (208-267)||(14599607-14599667)
chr4 (228-267)||(15842482-15842521)
chr4 (237-267)||(9338161-9338191)
chr4 (234-268)||(16398309-16398343)
chr4 (228-264)||(23623545-23623581)
[»] chr7 (49 HSPs)
chr7 (208-385)||(5614404-5614581)
chr7 (209-385)||(31825652-31825827)
chr7 (208-385)||(12826328-12826506)
chr7 (208-385)||(13284657-13284835)
chr7 (208-383)||(42596318-42596494)
chr7 (208-385)||(41028533-41028708)
chr7 (208-383)||(12088267-12088441)
chr7 (208-345)||(24539416-24539551)
chr7 (208-345)||(45554531-45554667)
chr7 (209-343)||(19801076-19801208)
chr7 (208-341)||(19586725-19586856)
chr7 (209-351)||(9007912-9008054)
chr7 (207-348)||(43984630-43984771)
chr7 (208-348)||(27990064-27990204)
chr7 (205-346)||(7018357-7018497)
chr7 (205-346)||(7033715-7033855)
chr7 (209-348)||(13130807-13130946)
chr7 (207-310)||(5380767-5380869)
chr7 (207-348)||(9534190-9534330)
chr7 (208-348)||(9544474-9544613)
chr7 (209-297)||(15987617-15987705)
chr7 (209-348)||(14947081-14947220)
chr7 (209-348)||(15374675-15374814)
chr7 (208-310)||(5390405-5390507)
chr7 (208-310)||(8502054-8502156)
chr7 (208-310)||(8512524-8512626)
chr7 (208-310)||(44898303-44898406)
chr7 (208-310)||(44908728-44908831)
chr7 (208-310)||(6535489-6535591)
chr7 (208-310)||(11625319-11625421)
chr7 (208-310)||(16141418-16141520)
chr7 (208-310)||(46498119-46498221)
chr7 (209-310)||(6545810-6545911)
chr7 (209-345)||(8341180-8341312)
chr7 (209-310)||(16130870-16130971)
chr7 (209-310)||(46508731-46508832)
chr7 (207-267)||(26308162-26308224)
chr7 (208-310)||(32099385-32099487)
chr7 (209-348)||(42622062-42622199)
chr7 (209-310)||(5928140-5928241)
chr7 (208-267)||(26304602-26304663)
chr7 (208-267)||(26362155-26362216)
chr7 (209-310)||(32109822-32109923)
chr7 (209-348)||(2990840-2990980)
chr7 (209-264)||(10610732-10610787)
chr7 (209-268)||(12771137-12771195)
chr7 (209-268)||(14247129-14247188)
chr7 (276-345)||(10416956-10417023)
chr7 (206-259)||(40704199-40704252)
[»] chr3 (45 HSPs)
chr3 (208-385)||(24872176-24872353)
chr3 (208-385)||(49386332-49386509)
chr3 (208-385)||(24814766-24814943)
chr3 (208-385)||(13118399-13118574)
chr3 (208-345)||(2487828-2487962)
chr3 (209-345)||(4781402-4781536)
chr3 (208-348)||(4372510-4372650)
chr3 (209-385)||(14801383-14801557)
chr3 (236-345)||(19827213-19827320)
chr3 (208-385)||(51977440-51977615)
chr3 (209-348)||(4382251-4382390)
chr3 (207-345)||(20743659-20743798)
chr3 (208-348)||(10943-11082)
chr3 (208-345)||(24773740-24773874)
chr3 (212-345)||(20294011-20294141)
chr3 (209-321)||(20493020-20493130)
chr3 (208-310)||(682767-682869)
chr3 (208-310)||(6423312-6423414)
chr3 (208-310)||(8973851-8973953)
chr3 (208-310)||(9538140-9538242)
chr3 (209-310)||(1684210-1684311)
chr3 (209-310)||(8984406-8984507)
chr3 (209-310)||(9548466-9548567)
chr3 (209-310)||(12794400-12794501)
chr3 (209-310)||(16334375-16334476)
chr3 (208-385)||(23502827-23503008)
chr3 (208-322)||(25434106-25434218)
chr3 (208-348)||(10002380-10002520)
chr3 (208-267)||(6433781-6433841)
chr3 (208-321)||(10506818-10506922)
chr3 (208-321)||(10507632-10507736)
chr3 (209-310)||(16697765-16697866)
chr3 (209-321)||(16127480-16127591)
chr3 (208-268)||(38816903-38816964)
chr3 (209-310)||(5654582-5654686)
chr3 (209-263)||(4023079-4023134)
chr3 (208-264)||(11460878-11460934)
chr3 (209-247)||(17734984-17735022)
chr3 (209-247)||(19036253-19036291)
chr3 (209-269)||(11043659-11043719)
chr3 (228-264)||(4952242-4952278)
chr3 (287-354)||(13430556-13430620)
chr3 (209-241)||(19827177-19827209)
chr3 (208-298)||(20280645-20280729)
chr3 (228-264)||(28367342-28367378)
[»] chr2 (39 HSPs)
chr2 (209-385)||(27158874-27159050)
chr2 (208-385)||(27169220-27169398)
chr2 (209-385)||(22907745-22907921)
chr2 (208-382)||(19343252-19343425)
chr2 (211-385)||(22903073-22903248)
chr2 (208-345)||(32877684-32877819)
chr2 (208-345)||(16901089-16901225)
chr2 (208-345)||(16994480-16994616)
chr2 (209-345)||(45191811-45191944)
chr2 (209-348)||(4468973-4469111)
chr2 (209-321)||(22671481-22671593)
chr2 (209-321)||(22678620-22678732)
chr2 (208-348)||(32935656-32935796)
chr2 (209-345)||(3604513-3604651)
chr2 (209-387)||(6875856-6876031)
chr2 (208-348)||(4459348-4459488)
chr2 (208-348)||(5345583-5345723)
chr2 (209-348)||(5335732-5335871)
chr2 (207-322)||(24695454-24695568)
chr2 (209-348)||(29424324-29424461)
chr2 (207-297)||(574699-574789)
chr2 (208-348)||(37861985-37862124)
chr2 (212-345)||(12580292-12580422)
chr2 (206-348)||(38956717-38956859)
chr2 (208-385)||(44637522-44637701)
chr2 (208-310)||(18652223-18652325)
chr2 (209-310)||(18664341-18664442)
chr2 (208-310)||(9501632-9501734)
chr2 (208-310)||(9512998-9513100)
chr2 (208-310)||(29115226-29115328)
chr2 (221-354)||(69055-69187)
chr2 (206-262)||(2997567-2997624)
chr2 (209-310)||(17489694-17489799)
chr2 (208-268)||(41025763-41025823)
chr2 (280-359)||(40407960-40408037)
chr2 (211-365)||(22146730-22146882)
chr2 (276-348)||(38929445-38929517)
chr2 (228-266)||(22633032-22633070)
chr2 (280-385)||(28451261-28451364)
[»] scaffold0308 (1 HSPs)
scaffold0308 (207-385)||(19901-20080)
[»] chr1 (40 HSPs)
chr1 (209-385)||(1973636-1973813)
chr1 (208-385)||(1988422-1988600)
chr1 (208-385)||(52948650-52948826)
chr1 (211-345)||(41542784-41542916)
chr1 (209-345)||(22401472-22401605)
chr1 (208-345)||(12420383-12420517)
chr1 (209-342)||(20315408-20315540)
chr1 (208-345)||(27067054-27067190)
chr1 (209-345)||(20316644-20316778)
chr1 (209-345)||(25868320-25868455)
chr1 (212-321)||(19735520-19735628)
chr1 (208-385)||(20327121-20327300)
chr1 (209-348)||(21904280-21904419)
chr1 (209-348)||(8541169-8541307)
chr1 (209-348)||(8606408-8606546)
chr1 (208-348)||(2117824-2117964)
chr1 (208-348)||(42035186-42035325)
chr1 (208-345)||(18095872-18096006)
chr1 (209-271)||(26192209-26192271)
chr1 (209-345)||(25038347-25038481)
chr1 (209-345)||(25043559-25043693)
chr1 (208-343)||(22961879-22962012)
chr1 (209-320)||(2369376-2369485)
chr1 (208-310)||(16155888-16155990)
chr1 (209-296)||(49336782-49336867)
chr1 (209-310)||(21459633-21459734)
chr1 (208-268)||(41200880-41200941)
chr1 (208-267)||(25020515-25020575)
chr1 (209-348)||(30548577-30548715)
chr1 (208-265)||(21820403-21820460)
chr1 (208-320)||(34823966-34824077)
chr1 (209-268)||(25822287-25822346)
chr1 (209-365)||(34000819-34000975)
chr1 (236-348)||(18384314-18384425)
chr1 (208-321)||(37013350-37013461)
chr1 (212-345)||(4951393-4951525)
chr1 (209-263)||(13966104-13966159)
chr1 (228-263)||(3470426-3470461)
chr1 (206-259)||(22893225-22893278)
chr1 (228-264)||(25882593-25882629)
[»] scaffold0313 (2 HSPs)
scaffold0313 (208-385)||(6698-6876)
scaffold0313 (208-385)||(10480-10658)
[»] chr6 (42 HSPs)
chr6 (208-385)||(34766286-34766464)
chr6 (208-385)||(18335846-18336022)
chr6 (242-385)||(8562287-8562430)
chr6 (208-385)||(19364002-19364179)
chr6 (208-345)||(26019360-26019497)
chr6 (208-385)||(30656832-30657007)
chr6 (209-345)||(7753677-7753811)
chr6 (208-345)||(24502530-24502667)
chr6 (209-345)||(1598132-1598266)
chr6 (209-345)||(12988812-12988946)
chr6 (208-345)||(18705277-18705412)
chr6 (208-345)||(18711212-18711347)
chr6 (209-345)||(16322296-16322430)
chr6 (209-345)||(16334444-16334578)
chr6 (209-348)||(18202517-18202656)
chr6 (208-348)||(20968812-20968952)
chr6 (206-385)||(28093555-28093738)
chr6 (209-268)||(789963-790022)
chr6 (208-310)||(16898951-16899053)
chr6 (208-310)||(16909604-16909706)
chr6 (208-310)||(31358566-31358668)
chr6 (208-310)||(31368296-31368398)
chr6 (209-310)||(3286851-3286952)
chr6 (209-310)||(14792607-14792708)
chr6 (209-310)||(20913287-20913388)
chr6 (209-310)||(12456058-12456162)
chr6 (209-310)||(18170878-18170981)
chr6 (209-310)||(24929989-24930090)
chr6 (209-310)||(26439834-26439935)
chr6 (208-310)||(18161066-18161172)
chr6 (208-348)||(29541416-29541554)
chr6 (250-345)||(26169555-26169648)
chr6 (250-345)||(26169744-26169837)
chr6 (250-345)||(26169933-26170026)
chr6 (250-345)||(26170122-26170215)
chr6 (250-345)||(26170311-26170404)
chr6 (250-345)||(26170500-26170593)
chr6 (282-385)||(26169337-26169438)
chr6 (276-354)||(6314508-6314584)
chr6 (209-263)||(26512501-26512557)
chr6 (209-263)||(26517617-26517673)
chr6 (228-264)||(21356338-21356374)
[»] chr8 (25 HSPs)
chr8 (209-385)||(14438357-14438533)
chr8 (209-385)||(26361283-26361467)
chr8 (208-385)||(31998193-31998368)
chr8 (208-345)||(8668919-8669054)
chr8 (208-345)||(14892986-14893122)
chr8 (207-348)||(13675730-13675871)
chr8 (208-348)||(3988482-3988622)
chr8 (208-348)||(21996234-21996374)
chr8 (236-385)||(31990632-31990779)
chr8 (209-348)||(16582923-16583062)
chr8 (209-348)||(21986701-21986840)
chr8 (208-348)||(12900259-12900399)
chr8 (209-345)||(14880637-14880772)
chr8 (208-348)||(21462075-21462215)
chr8 (209-345)||(23014006-23014140)
chr8 (228-345)||(20529843-20529958)
chr8 (236-345)||(33773109-33773216)
chr8 (208-310)||(21212204-21212306)
chr8 (208-310)||(21335303-21335405)
chr8 (209-310)||(21201789-21201890)
chr8 (208-310)||(9323989-9324091)
chr8 (209-320)||(11429421-11429531)
chr8 (209-310)||(18524535-18524636)
chr8 (208-263)||(6760708-6760763)
chr8 (206-299)||(12840409-12840502)
[»] scaffold0059 (1 HSPs)
scaffold0059 (209-385)||(39527-39703)
[»] scaffold0031 (1 HSPs)
scaffold0031 (209-385)||(110728-110902)
[»] scaffold0118 (1 HSPs)
scaffold0118 (209-345)||(9111-9246)
[»] scaffold0908 (1 HSPs)
scaffold0908 (208-345)||(95-231)
[»] scaffold0002 (1 HSPs)
scaffold0002 (208-345)||(394818-394953)
[»] scaffold0058 (3 HSPs)
scaffold0058 (209-321)||(27973-28084)
scaffold0058 (208-321)||(49177-49288)
scaffold0058 (209-311)||(58669-58771)
[»] scaffold0873 (1 HSPs)
scaffold0873 (209-348)||(4757-4895)
[»] scaffold0047 (1 HSPs)
scaffold0047 (209-348)||(73686-73824)
[»] scaffold0068 (1 HSPs)
scaffold0068 (209-348)||(30615-30754)
[»] scaffold0234 (1 HSPs)
scaffold0234 (208-385)||(20012-20188)
[»] scaffold0591 (1 HSPs)
scaffold0591 (209-348)||(184-323)
[»] scaffold0360 (1 HSPs)
scaffold0360 (209-381)||(1205-1377)
[»] scaffold0254 (1 HSPs)
scaffold0254 (208-310)||(6802-6906)
[»] scaffold0141 (1 HSPs)
scaffold0141 (208-345)||(19746-19882)
[»] scaffold0706 (1 HSPs)
scaffold0706 (208-348)||(915-1055)
[»] scaffold0005 (2 HSPs)
scaffold0005 (207-310)||(308981-309083)
scaffold0005 (208-267)||(217711-217771)
[»] scaffold0811 (1 HSPs)
scaffold0811 (208-297)||(2326-2416)
[»] scaffold0611 (1 HSPs)
scaffold0611 (209-348)||(9081-9220)
[»] scaffold0172 (1 HSPs)
scaffold0172 (208-347)||(330-469)
[»] scaffold0043 (1 HSPs)
scaffold0043 (209-348)||(91837-91976)
[»] scaffold0014 (2 HSPs)
scaffold0014 (208-348)||(147677-147815)
scaffold0014 (209-310)||(232951-233052)
[»] scaffold0343 (1 HSPs)
scaffold0343 (209-310)||(14892-14993)
[»] scaffold2147 (1 HSPs)
scaffold2147 (209-270)||(9-71)
[»] scaffold0034 (1 HSPs)
scaffold0034 (208-345)||(8396-8529)
[»] scaffold0277 (1 HSPs)
scaffold0277 (209-310)||(18325-18426)
[»] scaffold0265 (1 HSPs)
scaffold0265 (208-265)||(12349-12406)
[»] scaffold0916 (1 HSPs)
scaffold0916 (216-385)||(11-176)
[»] scaffold0335 (1 HSPs)
scaffold0335 (208-260)||(13896-13948)
[»] scaffold0168 (2 HSPs)
scaffold0168 (236-348)||(6447-6558)
scaffold0168 (209-241)||(6568-6600)
[»] scaffold0121 (1 HSPs)
scaffold0121 (208-268)||(5956-6015)
[»] scaffold0018 (1 HSPs)
scaffold0018 (205-296)||(61040-61131)
[»] scaffold0057 (1 HSPs)
scaffold0057 (211-316)||(67219-67325)
[»] scaffold0021 (1 HSPs)
scaffold0021 (228-266)||(100566-100604)
[»] scaffold0009 (1 HSPs)
scaffold0009 (209-255)||(267040-267085)
[»] scaffold0238 (1 HSPs)
scaffold0238 (209-241)||(1-33)
[»] scaffold0142 (1 HSPs)
scaffold0142 (211-263)||(27738-27789)
[»] scaffold0048 (1 HSPs)
scaffold0048 (209-241)||(65487-65519)
[»] scaffold0001 (1 HSPs)
scaffold0001 (228-264)||(413599-413635)


Alignment Details
Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 209
Target Start/End: Original strand, 38454387 - 38454586
Alignment:
Q  10 attattctctttgaagcacttttgtcttattctttgcactgaataacattgacaaactcttgagtagaatcaagattatcaccaatattttttggttagg 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  38454387 attattctctttgaagcacttttgtcttattctttgcactgaataacattgacaaactcttgagtagaatcaagattatcaccaatgttttttggttagg 38454486  T
Q  110 acaaacacccaaccaaaccaaaggaaactgaactggatcgattcaattgttaatttttaatttagatatttaagaaaacgatgtaccgaaccgataggtt 209  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38454487 acaaacactcaaccaaaccaaaggaaactgaactggatcgattcaattattaatttttaatttagatatttaagaaaacgatgtaccgaaccgataggtt 38454586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 208 - 385
Target Start/End: Complemental strand, 20948963 - 20948785
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  20948963 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaatcctgccacttaaaagttattctcaagttgataacttg 20948864  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20948863 gaatggttaagttaacagacagacttcagaacgttctgaagtattagtataaacacaatttgaataattaaatgtgttt 20948785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 209 - 385
Target Start/End: Complemental strand, 20959331 - 20959154
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  20959331 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaatcctgccacttaaaagttattctcaagttgataacttgg 20959232  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20959231 aatggttaagttaacagacagacttcagaacgttctgaagtattagtataaacacaatttgaataattaaatgtgttt 20959154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 38179471 - 38179666
Alignment:
Q  10 attattctctttgaagcacttttgtcttattctttgcactgaataacattgacaaactcttgagtagaatcaagattatcaccaatattttttggttagg 109  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  38179471 attattctctttgaagcacatt-gtcttattctttgcactgaataacaatgacaaactcttgagtagaatcaagattatcaccaatcttttttggttagg 38179569  T
Q  110 acaaacacccaaccaaaccaaaggaaactgaactggatcgattcaattgttaatttttaatttagatatttaagaaaacgatgtaccgaaccgatag 206  Q
    |||||||| |||||||||||||| ||| |||||||||| ||||||||| ||| ||||||||||| |||| ||||||| |||||||||||||||||||    
T  38179570 acaaacactcaaccaaaccaaagaaaattgaactggattgattcaattattagtttttaatttaaatatctaagaaagcgatgtaccgaaccgatag 38179666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 38191660 - 38191465
Alignment:
Q  10 attattctctttgaagcacttttgtcttattctttgcactgaataacattgacaaactcttgagtagaatcaagattatcaccaatattttttggttagg 109  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  38191660 attattctctttgaagcacatt-gtcttattctttgcactgaataacaatgacaaactcttgagtagaatcaagattatcaccaatcttttttggttagg 38191562  T
Q  110 acaaacacccaaccaaaccaaaggaaactgaactggatcgattcaattgttaatttttaatttagatatttaagaaaacgatgtaccgaaccgatag 206  Q
    |||||||| |||||||||||||| ||| |||||||||| ||||||||| ||| ||||||||||| |||| ||||||| |||||||||||||||||||    
T  38191561 acaaacactcaaccaaaccaaagaaaattgaactggattgattcaattattagtttttaatttaaatatctaagaaagcgatgtaccgaaccgatag 38191465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 38206695 - 38206890
Alignment:
Q  10 attattctctttgaagcacttttgtcttattctttgcactgaataacattgacaaactcttgagtagaatcaagattatcaccaatattttttggttagg 109  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  38206695 attattctctttgaagcacatt-gtcttattctttgcactgaataacaatgacaaactcttgagtagaatcaagattatcaccaatcttttttggttagg 38206793  T
Q  110 acaaacacccaaccaaaccaaaggaaactgaactggatcgattcaattgttaatttttaatttagatatttaagaaaacgatgtaccgaaccgatag 206  Q
    |||||||| |||||||||||||| ||| |||||||||| ||||||||| ||| ||||||||||| |||| ||||||| |||||||||||||||||||    
T  38206794 acaaacactcaaccaaaccaaagaaaattgaactggattgattcaattattagtttttaatttaaatatctaagaaagcgatgtaccgaaccgatag 38206890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 38218885 - 38218690
Alignment:
Q  10 attattctctttgaagcacttttgtcttattctttgcactgaataacattgacaaactcttgagtagaatcaagattatcaccaatattttttggttagg 109  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  38218885 attattctctttgaagcacatt-gtcttattctttgcactgaataacaatgacaaactcttgagtagaatcaagattatcaccaatcttttttggttagg 38218787  T
Q  110 acaaacacccaaccaaaccaaaggaaactgaactggatcgattcaattgttaatttttaatttagatatttaagaaaacgatgtaccgaaccgatag 206  Q
    |||||||| |||||||||||||| ||| |||||||||| ||||||||| ||| ||||||||||| |||| ||||||| |||||||||||||||||||    
T  38218786 acaaacactcaaccaaaccaaagaaaattgaactggattgattcaattattagtttttaatttaaatatctaagaaagcgatgtaccgaaccgatag 38218690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 209 - 385
Target Start/End: Original strand, 19547400 - 19547576
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||| ||||||||||||| |||||||| | |||||||||||||||||||||||||  ||||| || ||||||||||||||||||||||||| ||||| ||    
T  19547400 tgaattagataaaatagtcacaaggaatgagggtttgaattgtgaccctttaaaatgtaaacttgtcacttaaaagttattctcaagttgaaaacttaga 19547499  T
Q  309 atggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||| |||||||||||||||| ||||| |||||| |||||| |||||||||| ||| |||||||||||||||||||||    
T  19547500 atgattaagttaacagacagtcttcagaacgttttgaagtgttagtataaaaacagtttaaataattaaatgtgttt 19547576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 19886836 - 19886970
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| ||||||||    
T  19886836 tgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgga 19886934  T
Q  309 atggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||| || ||||||||| ||||||||||    
T  19886935 atggttaagttaaaag-cagacttcagaacgttctga 19886970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 208 - 345
Target Start/End: Original strand, 4037126 - 4037261
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| |||||||    
T  4037126 ttgaagtagataaaatagtcacaaggaagggaggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgg 4037224  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||||||||||| || ||||||||| ||||||||||    
T  4037225 aatggttaagttaaaag-cagacttcagaacgttctga 4037261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 13570826 - 13570961
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| |||||||    
T  13570826 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgg 13570924  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  13570925 aatggttaagttaacag-cagacttcagaacgttctga 13570961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 208 - 345
Target Start/End: Complemental strand, 37818710 - 37818573
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg--tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataactt 305  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||| ||  || ||||| | ||||||||||||| |||||    
T  37818710 ttgaagtagataaaatagtcacaaggaaggggggggtttgaattgtgaccctttaaaaattaaacctgtaacctaaaattgattctcaagttga-aactt 37818612  T
Q  306 ggaatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  37818611 ggaatggttaagttaacag-cagacttcagaacgttctga 37818573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 208 - 345
Target Start/End: Original strand, 30951858 - 30951993
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| ||||||    
T  30951858 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttg 30951956  T
Q  307 gaatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||||  | |||||||||| ||||||||||    
T  30951957 gaatggttaagtta--aaacagacttcagaacgttctga 30951993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 30942437 - 30942571
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| |||||||    
T  30942437 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgg 30942535  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||||||||||  | |||||||||| ||||||||||    
T  30942536 aatggttaagtta--aaacagacttcagaacgttctga 30942571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 37646479 - 37646613
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| |||||||    
T  37646479 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgg 37646577  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||||||||||  | |||||||||| ||||||||||    
T  37646578 aatggttaagtta--aaacagacttcagaacgttctga 37646613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 34129636 - 34129771
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| |||||||    
T  34129636 tgaagtagataaaatagttacaaggaagggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgg 34129734  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||||||||||| || |||| |||| ||||||||||    
T  34129735 aatggttaagttaaaag-cagaattcagaacgttctga 34129771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 22172398 - 22172534
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggt--ttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    |||||||||||||||||| ||||||||||||||   |||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| ||||||    
T  22172398 tgaagtagataaaatagtcacaaggaaggggggggattgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttg 22172496  T
Q  307 gaatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||| ||||||||||| ||||||||| ||||||||||    
T  22172497 gaatgggtaagttaacag-cagacttcagaacgttctga 22172534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 348
Target Start/End: Original strand, 18217746 - 18217886
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||  |||||||||| |||||||||| | | |||||    
T  18217746 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaatt-aacctgaaacttaaaagtgattctcaagtagtttacttg 18217844  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||| |  | ||||||| |||||||||||||    
T  18217845 gaatagttaagttaatattctgacttcagaacgttctgaagt 18217886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 348
Target Start/End: Complemental strand, 21754645 - 21754505
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||  |||||||||| |||||||||| | | |||||    
T  21754645 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaacc-tgaaacttaaaagtgattctcaagtagtttacttg 21754547  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||| |  | ||||||| |||||||||||||    
T  21754546 gaatagttaagttaatattctgacttcagaacgttctgaagt 21754505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 209 - 348
Target Start/End: Complemental strand, 21683295 - 21683156
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||  |||||||||| |||||||||| | | ||||||    
T  21683295 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaacc-tgaaacttaaaagtgattctcaagtagtttacttgg 21683197  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||| |  | ||||||| |||||||||||||    
T  21683196 aatagttaagttaatattctgacttcagaacgttctgaagt 21683156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 209 - 348
Target Start/End: Complemental strand, 21763931 - 21763792
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||  |||||||||| |||||||||| | | ||||||    
T  21763931 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaacc-tgaaacttaaaagtgattctcaagtagtttacttgg 21763833  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||| |  | ||||||| |||||||||||||    
T  21763832 aatagttaagttaatattctgacttcagaacgttctgaagt 21763792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 209 - 348
Target Start/End: Complemental strand, 31917920 - 31917782
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  | ||  ||||||| || |||||||||| | | |||||||    
T  31917920 tgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaggtgattctcaagtagtttacttgga 31917822  T
Q  309 atggttaagttaacagacagacttcataacgttctgaagt 348  Q
    || |||||||||||   | ||||||| |||||||||||||    
T  31917821 atagttaagttaactttctgacttcagaacgttctgaagt 31917782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 348
Target Start/End: Original strand, 18208409 - 18208548
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||  |||||||||| ||||| |||| | | ||||||    
T  18208409 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaatt-aacctgaaacttaaaagtgattcttaagtagtttacttgg 18208507  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||| |  | ||||||| |||||||||||||    
T  18208508 aatagttaagttaatattctgacttcagaacgttctgaagt 18208548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 209 - 385
Target Start/End: Original strand, 204616 - 204790
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||  | | ||||  |||| |||||| ||||||||||||| |||||||    
T  204616 tgaagtagataaaatagtcacaaggaagaggggtttgaattgtgaccctttaaaa--ttatcatgtaacttaaaaagtaattctcaagttga-aacttgg 204712  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagtattagt-ataaacacaatttaaataattaaatgtgttt 385  Q
    ||| ||||||||||  ||||||||||| |||||||||| || | ||| | ||| ||| |||||| || |||||||||||    
T  204713 aatagttaagttaa-tgacagacttcagaacgttctgatgtctgagtgacaaaaacagtttaaaaaagtaaatgtgttt 204790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 236 - 345
Target Start/End: Original strand, 37537396 - 37537502
Alignment:
Q  236 ggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttggaatggttaagttaacagacagacttcat 335  Q
    ||||||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| ||||||||||||||||||||  | ||||||||||     
T  37537396 ggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttggaatggttaagtta--aaacagacttcag 37537492  T
Q  336 aacgttctga 345  Q
    ||||||||||    
T  37537493 aacgttctga 37537502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 236 - 345
Target Start/End: Original strand, 27273356 - 27273463
Alignment:
Q  236 ggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttggaatggttaagttaacagacagacttcat 335  Q
    ||||||||||||||||||||||||||||||||||| |   |||||||| |  |||||||||||| ||||||||||||||||||||| || ||||||||||    
T  27273356 ggggggtttgaattgtgaccctttaaaaattaaacctataacttaaaattggttctcaagttga-aacttggaatggttaagttaaaag-cagacttcat 27273453  T
Q  336 aacgttctga 345  Q
    ||||||||||    
T  27273454 aacgttctga 27273463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 91 - 191
Target Start/End: Original strand, 26035851 - 26035951
Alignment:
Q  91 ccaatattttttggttaggacaaacacccaaccaaaccaaaggaaactgaactggatcgattcaattgttaatttttaatttagatatttaagaaaacga 190  Q
    ||||| |||||||||||||||||| || ||| ||||||||||||||||||||||||| ||||||||| ||| |||||||||| ||||| ||||||| |||    
T  26035851 ccaatcttttttggttaggacaaaaactcaatcaaaccaaaggaaactgaactggattgattcaattattagtttttaattttgatatctaagaaatcga 26035950  T
Q  191 t 191  Q
    |    
T  26035951 t 26035951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 209 - 349
Target Start/End: Complemental strand, 36317555 - 36317416
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||  |||||||| | |||||||| ||    |||||||    
T  36317555 tgaagtagataaaatagtcacaaggaaggggg-tttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaaattttggacttgga 36317457  T
Q  309 atggttaagttaacagacagacttcataacgttctgaagta 349  Q
    || |||||||||    || ||||||| ||||||||||||||    
T  36317456 atagttaagttagtgaactgacttcagaacgttctgaagta 36317416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 207 - 341
Target Start/End: Original strand, 37297959 - 37298092
Alignment:
Q  207 gttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataactt 305  Q
    |||||||||||||||||||| || |||  |||||||||||||| |||||||||||||||||||| ||  |||| |||| | ||||||||||| | |||||    
T  37297959 gttgaagtagataaaatagtcacgaggggggggggtttgaattttgaccctttaaaaattaaacctgtaacttaaaaactgattctcaagtt-aaaactt 37298057  T
Q  306 ggaatggttaagttaacagacagacttcataacgtt 341  Q
    |||||||||||||||| || ||||||||| ||||||    
T  37298058 ggaatggttaagttaa-aggcagacttcagaacgtt 37298092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 38168495 - 38168411
Alignment:
Q  10 attattctctttgaagcacttttgtcttattctttgcactgaataacattgacaaactcttgagtagaatcaagattatcaccaat 95  Q
    ||||||||||||||||||| || |||||||||||||||||||| ||||||||| ||||||||||||||| ||| ||||||||||||    
T  38168495 attattctctttgaagcacctt-gtcttattctttgcactgaaaaacattgacgaactcttgagtagaaacaaaattatcaccaat 38168411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 38198609 - 38198693
Alignment:
Q  10 attattctctttgaagcacttttgtcttattctttgcactgaataacattgacaaactcttgagtagaatcaagattatcaccaat 95  Q
    ||||||||||||||||||| || |||||||||||||||||||| ||||||||| ||||||||||||||| ||| ||||||||||||    
T  38198609 attattctctttgaagcacctt-gtcttattctttgcactgaaaaacattgacgaactcttgagtagaaacaaaattatcaccaat 38198693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 33940427 - 33940325
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | |||||    
T  33940427 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttg 33940329  T
Q  307 gaat 310  Q
    ||||    
T  33940328 gaat 33940325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 33950826 - 33950725
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | ||||||    
T  33950826 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttgg 33950728  T
Q  308 aat 310  Q
    |||    
T  33950727 aat 33950725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 97 - 209
Target Start/End: Original strand, 26031017 - 26031128
Alignment:
Q  97 ttttttggttaggacaaacacccaaccaaaccaaaggaaactgaactggatcgattcaattgttaatttttaatttagatatttaagaaaacgatgtacc 196  Q
    |||||||| |||||||||||| |||||||| ||||||||| |||||||||| || |||||| ||| |||||||||| ||||| ||| |||  |||||| |    
T  26031017 ttttttggctaggacaaacactcaaccaaatcaaaggaaattgaactggattga-tcaattattattttttaattttgatatctaataaactgatgtatc 26031115  T
Q  197 gaaccgataggtt 209  Q
    |||||||||||||    
T  26031116 gaaccgataggtt 26031128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 11410063 - 11410165
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |||||    
T  11410063 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttg 11410161  T
Q  307 gaat 310  Q
    ||||    
T  11410162 gaat 11410165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 296
Target Start/End: Complemental strand, 22245721 - 22245634
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagt 296  Q
    |||||||||||||||| | |||||||||||||||||||||| |||||||||||||| | ||| ||| |||||||| | ||||||||||    
T  22245721 tgaagtagataaaataatcacaaggaaggggggtttgaattttgaccctttaaaaaattaacctgcaacttaaaattaattctcaagt 22245634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 26201559 - 26201661
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |||||    
T  26201559 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttg 26201657  T
Q  307 gaat 310  Q
    ||||    
T  26201658 gaat 26201661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 27413255 - 27413153
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaa-ggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |||||    
T  27413255 ttgaagtagataaaatagtcacaaggaatggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttg 27413157  T
Q  307 gaat 310  Q
    ||||    
T  27413156 gaat 27413153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 8764320 - 8764421
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | ||||||    
T  8764320 tgaagttgataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttgg 8764418  T
Q  308 aat 310  Q
    |||    
T  8764419 aat 8764421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 26190978 - 26191079
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | ||||||    
T  26190978 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttgg 26191076  T
Q  308 aat 310  Q
    |||    
T  26191077 aat 26191079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 97 - 209
Target Start/End: Complemental strand, 38450453 - 38450340
Alignment:
Q  97 ttttttggttaggacaaacacccaaccaaaccaaaggaaactgaactgga-tcgattcaattgttaatttttaatttagatatttaagaaaacgatgtac 195  Q
    |||||||||||| ||||| || ||||||||| |||||||| ||||||||| | ||||||||| ||| |||||||||| ||||| |||||||  |||||||    
T  38450453 ttttttggttagaacaaaaactcaaccaaactaaaggaaattgaactggattggattcaattattagtttttaattttgatatctaagaaactgatgtac 38450354  T
Q  196 cgaaccgataggtt 209  Q
    | ||| ||||||||    
T  38450353 caaacagataggtt 38450340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 32071545 - 32071486
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaatta 267  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  32071545 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaatta 32071486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 18362384 - 18362282
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||| ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |||||    
T  18362384 ttgaagttgataaaatagtcacaagaaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttg 18362286  T
Q  307 gaat 310  Q
    ||||    
T  18362285 gaat 18362282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 18391341 - 18391239
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||| ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |||||    
T  18391341 ttgaagttgataaaatagtcacaagaaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttg 18391243  T
Q  307 gaat 310  Q
    ||||    
T  18391242 gaat 18391239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 20898082 - 20897977
Alignment:
Q  202 gataggttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgata 301  Q
    ||||| |||||||| |||||||||| ||||| |||||||||||||||| ||||| |||||||||  ||| ||| |||||||| | | |||||||| | |     
T  20898082 gatagtttgaagtaaataaaatagttacaagaaaggggggtttgaattctgaccttttaaaaat--aacctgcaacttaaaattaaatctcaagtggttt 20897985  T
Q  302 acttggaa 309  Q
    ||||||||    
T  20897984 acttggaa 20897977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 19781631 - 19781568
Alignment:
Q  280 aaaagttattctcaagttgataacttggaatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||| ||||||||||||| |||||||||| ||||||||||  ||||||||||| ||||||||||    
T  19781631 aaaagtaattctcaagttga-aacttggaatagttaagttaat-gacagacttcagaacgttctga 19781568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 31150152 - 31150190
Alignment:
Q  228 acaaggaaggggggtttgaattgtgaccctttaaaaatt 266  Q
    ||||| |||||||||||||||||||||||||| ||||||    
T  31150152 acaagaaaggggggtttgaattgtgacccttttaaaatt 31150190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 4636584 - 4636548
Alignment:
Q  228 acaaggaaggggggtttgaattgtgaccctttaaaaa 264  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  4636584 acaagaaaggggggtttgaattgtgacccttttaaaa 4636548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 20903757 - 20903818
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaa----ggggggtttgaattgtgaccctttaaaaat 265  Q
    ||||||||||||||||||| ||||| ||    ||| ||||||||||||||||||||| ||||    
T  20903757 ttgaagtagataaaatagtcacaagaaatggggggtggtttgaattgtgaccctttacaaat 20903818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 37537360 - 37537392
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg 241  Q
    |||||||||||||||||| ||||||||||||||    
T  37537360 tgaagtagataaaatagtcacaaggaagggggg 37537392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 158; Significance: 6e-84; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 521147 - 521324
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  521147 ttgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattaatcctgccacttaaaagttattctcaagttgataacttgg 521246  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  521247 aatggttaagttaacagacagacttcagaacgttctgaagtattagtataaacacaatttgaataattaaatgtgttt 521324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 518640 - 518818
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  518640 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaatcctgccacttaaaagttattctcaagttgataacttg 518739  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  518740 gaatggttaagttaacagacagacttcagaacgttctgaagtattagtataaacacaatttgaataattaaatgtgttt 518818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 209 - 385
Target Start/End: Original strand, 17420255 - 17420432
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  17420255 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaacctgtcacttaaaagttattctcaagttgataacttgg 17420354  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  17420355 aatggttaagttaacagacagacttcagaacgttctgaagtgttagtataaaaacaatttaaataattaaatgtgttt 17420432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 252 - 385
Target Start/End: Complemental strand, 26459486 - 26459353
Alignment:
Q  252 gaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttggaatggttaagttaacagacagacttcataacgttctgaagtatt 351  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| ||    
T  26459486 gaccctttaaaaattaaacttgtcacttaaaagttattctcaggttgataacttggcatggttaagttaacagacagacttcagaacattctgaagtgtt 26459387  T
Q  352 agtataaacacaatttaaataattaaatgtgttt 385  Q
    |||||||| ||||| |||||||||||||||||||    
T  26459386 agtataaaaacaatctaaataattaaatgtgttt 26459353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 209 - 345
Target Start/End: Complemental strand, 2831094 - 2830960
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||  |||||||| | ||||||||||||| ||||||||    
T  2831094 tgaagtagataaaatagtcacaaggaaagggggtttgaattgtgaccctttaaaaattaaacatgtaacttaaaattgattctcaagttga-aacttgga 2830996  T
Q  309 atggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||| || ||||||||| ||||||||||    
T  2830995 atggttaagttaaaag-cagacttcaaaacgttctga 2830960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 208 - 345
Target Start/End: Complemental strand, 16630643 - 16630507
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| ||||||    
T  16630643 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttg 16630545  T
Q  307 gaatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||||| || ||||||||| ||||||||||    
T  16630544 gaatggttaagttaaaag-cagacttcagaacgttctga 16630507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 208 - 345
Target Start/End: Complemental strand, 44890128 - 44889993
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| | || ||| |||||||| ||||||||||||||||||||||||||||  |||||||| | ||||||||||||| |||||||    
T  44890128 ttgaagtagataaaatagtcataaagaatgggggtttaaattgtgaccctttaaaaattaaacatgtaacttaaaattgattctcaagttga-aacttgg 44890030  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||||||||||| || ||||||||| ||||||||||    
T  44890029 aatggttaagttaaaag-cagacttcagaacgttctga 44889993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 13401741 - 13401875
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    ||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||| ||  |||||||| | ||||||||||||| ||||||||    
T  13401741 tgaagtagataaattagtcacaaggaaggggggtttgaattgcgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgga 13401839  T
Q  309 atggttaagttaacagacagacttcataacgttctga 345  Q
    ||| ||||||||| || ||||||||| ||||||||||    
T  13401840 atgattaagttaaaag-cagacttcaaaacgttctga 13401875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 208 - 345
Target Start/End: Original strand, 17836341 - 17836476
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||  |||||||| | ||||||||||||| ||||||    
T  17836341 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattcaacctgtaacttaaaattgattctcaagttga-aacttg 17836439  T
Q  307 gaatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||||  | |||||||||| ||||||||||    
T  17836440 gaatggttaagtta--aaacagacttcagaacgttctga 17836476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 17826951 - 17827085
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||  |||||||| | ||||||||||||| |||||||    
T  17826951 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattcaacctgtaacttaaaattgattctcaagttga-aacttgg 17827049  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||||||||||  | |||||||||| ||||||||||    
T  17827050 aatggttaagtta--aaacagacttcagaacgttctga 17827085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 209 - 348
Target Start/End: Complemental strand, 21856987 - 21856848
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||  |||||||||| |||||||||||| | ||||||    
T  21856987 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaacc-tgaaacttaaaagtgattctcaagttgtttacttgg 21856889  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||| |  | ||||||| |||||||||||||    
T  21856888 aatagttaagttaatattctgacttcagaacgttctgaagt 21856848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 209 - 348
Target Start/End: Complemental strand, 21912850 - 21912711
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||  |||||||||| |||||||||||| | ||||||    
T  21912850 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaacc-tgaaacttaaaagtgattctcaagttgtttacttgg 21912752  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||| |  | ||||||| |||||||||||||    
T  21912751 aatagttaagttaatattctgacttcagaacgttctgaagt 21912711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 348
Target Start/End: Original strand, 5291862 - 5292002
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||  |||||||||| |||||||||| | | |||||    
T  5291862 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaatt-aacctgaaacttaaaagtgattctcaagtagtttacttg 5291960  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||| |  | ||||||| |||||||||||||    
T  5291961 gaatagttaagttaatattctgacttcagaacgttctgaagt 5292002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 348
Target Start/End: Original strand, 5301521 - 5301661
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||  |||||||||| |||||||||| | | |||||    
T  5301521 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaatt-aacctgaaacttaaaagtgattctcaagtagtttacttg 5301619  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||| |  | ||||||| |||||||||||||    
T  5301620 gaatagttaagttaatattctgacttcagaacgttctgaagt 5301661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 211 - 348
Target Start/End: Original strand, 7845695 - 7845831
Alignment:
Q  211 aagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttggaat 310  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||  | ||  |||||||||| ||| |||||||| | |||||||||    
T  7845695 aagtagataaaatagtcacaaggaatgggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattttcaagttgtttacttggaat 7845793  T
Q  311 ggttaagttaacagacagacttcataacgttctgaagt 348  Q
     |||||||||||   | |||||||||||||||||||||    
T  7845794 agttaagttaactttctgacttcataacgttctgaagt 7845831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 348
Target Start/End: Complemental strand, 16250556 - 16250416
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||  |||||||||| |||||||||| | | |||||    
T  16250556 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaacc-tgaaacttaaaagtgattctcaagtagtttacttg 16250458  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||| |  | ||||||| |||||||||||||    
T  16250457 gaatagttaagttaatattctgacttcagaacgttctgaagt 16250416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 348
Target Start/End: Complemental strand, 21847396 - 21847256
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||  |||||||||| |||||||||| | | |||||    
T  21847396 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaacc-tgaaacttaaaagtgattctcaagtagtttacttg 21847298  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||| |  | ||||||| |||||||||||||    
T  21847297 gaatagttaagttaatattctgacttcagaacgttctgaagt 21847256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 348
Target Start/End: Complemental strand, 21903259 - 21903119
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||  |||||||||| |||||||||| | | |||||    
T  21903259 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaacc-tgaaacttaaaagtgattctcaagtagtttacttg 21903161  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||| |  | ||||||| |||||||||||||    
T  21903160 gaatagttaagttaatattctgacttcagaacgttctgaagt 21903119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 348
Target Start/End: Original strand, 27689182 - 27689322
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||  |||||||||| |||||||||| | | |||||    
T  27689182 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaatt-aacctgaaacttaaaagtgattctcaagtagtttacttg 27689280  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||| |  | ||||||| |||||||||||||    
T  27689281 gaatagttaagttaatattctgacttcagaacgttctgaagt 27689322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 209 - 348
Target Start/End: Original strand, 27679528 - 27679667
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||  |||||||||| |||||||||| | | ||||||    
T  27679528 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaatt-aacctgaaacttaaaagtgattctcaagtagtttacttgg 27679626  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||| |  | ||||||| |||||||||||||    
T  27679627 aatagttaagttaatattctgacttcagaacgttctgaagt 27679667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 209 - 348
Target Start/End: Complemental strand, 10422891 - 10422753
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | |||||||    
T  10422891 tgaagtaaataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtaattctcaagttgtttacttgga 10422793  T
Q  309 atggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||  ||||||||||   | ||||||| |||||||||||||    
T  10422792 ataattaagttaactttctgacttcagaacgttctgaagt 10422753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 208 - 348
Target Start/End: Original strand, 3486401 - 3486541
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | |||||    
T  3486401 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttg 3486499  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
     ||| |||||||||||   | ||||||| |||||||||||||    
T  3486500 aaatagttaagttaactttctgacttcagaacgttctgaagt 3486541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 348
Target Start/End: Original strand, 3495725 - 3495864
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | |||||     
T  3495725 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttga 3495823  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||||   | ||||||| |||||||||||||    
T  3495824 aatagttaagttaactttctgacttcagaacgttctgaagt 3495864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 348
Target Start/End: Original strand, 7842812 - 7842951
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | ||||||    
T  7842812 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttgg 7842910  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| ||||| |||||   | ||||||| |||||||||||||    
T  7842911 aatagttaatttaactttctgacttcagaacgttctgaagt 7842951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 208 - 320
Target Start/End: Complemental strand, 30652776 - 30652665
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||| ||  |||||||| | |||||||||||| | ||||||    
T  30652776 ttgaagtagataaaatagtcacaaggaagggggatttgaattgtgaccctttaaaaatt-aacctgtaacttaaaattaattctcaagttgtttacttgg 30652678  T
Q  308 aatggttaagtta 320  Q
    ||| |||||||||    
T  30652677 aatagttaagtta 30652665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 208 - 322
Target Start/End: Complemental strand, 17144840 - 17144727
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | | |||     
T  17144840 ttgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttaattga 17144742  T
Q  308 aatggttaagttaac 322  Q
    ||| |||||||||||    
T  17144741 aatagttaagttaac 17144727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 208 - 348
Target Start/End: Complemental strand, 16254345 - 16254205
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||  | ||  |||||||||| |||||||||| | | |||||    
T  16254345 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgtccctttaaaaattatcc-tgaaacttaaaagtgattctcaagtggtttacttg 16254247  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||||   | ||||||| |||||||||||||    
T  16254246 gaatagttaagttaactttctgacttcaaaacgttctgaagt 16254205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 208 - 320
Target Start/End: Complemental strand, 16059479 - 16059369
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||| ||||||  |||||||| | |||||||||||| | ||||||    
T  16059479 ttgaagtagataaaatagtcacaag-aaggggggtttaaattgtgaccctttaaaaatt-aacatgtaacttaaaattaattctcaagttgtttacttgg 16059382  T
Q  308 aatggttaagtta 320  Q
    ||| |||||||||    
T  16059381 aatagttaagtta 16059369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 209 - 322
Target Start/End: Complemental strand, 15671189 - 15671076
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagg-ggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | ||||||    
T  15671189 tgaagtagataaaatagttacaaggaaggaggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttgg 15671091  T
Q  308 aatggttaagttaac 322  Q
    |||  ||||||||||    
T  15671090 aataattaagttaac 15671076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 209 - 348
Target Start/End: Original strand, 6404783 - 6404919
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| |||||||||| ||  |||||||||||||||||||||||| ||| ||  |||||||| | |||||||||||| | |||||||    
T  6404783 tgaagtagataaaatagtcacaaggaaggtgg--ttgaattgtgaccctttaaaaatt-aacttgtaacttaaaaatgattctcaagttgtttacttgga 6404879  T
Q  309 atggttaagttaacagacagacttcataacgttctgaagt 348  Q
    || |||||||||   ||  ||||||| |||||||||||||    
T  6404880 atagttaagttagtggaatgacttcagaacgttctgaagt 6404919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 16081234 - 16081336
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | |||||    
T  16081234 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttg 16081332  T
Q  307 gaat 310  Q
    ||||    
T  16081333 gaat 16081336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 6693324 - 6693223
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | ||||||    
T  6693324 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttgg 6693226  T
Q  308 aat 310  Q
    |||    
T  6693225 aat 6693223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 6703730 - 6703629
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | ||||||    
T  6703730 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttgg 6703632  T
Q  308 aat 310  Q
    |||    
T  6703631 aat 6703629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 211 - 344
Target Start/End: Original strand, 15622071 - 15622206
Alignment:
Q  211 aagtagataaaatagtaacaaggaagggggg---tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||| |||| ||||| |||   ||||||||||||||||||||||||||||||||  |||||||| | ||||||| ||||| || ||||    
T  15622071 aagtagataaaatagtcacaaagaaggtgggaggtttgaattgtgaccctttaaaaattaaacatgtaacttaaaattaattctcatgttga-aatttgg 15622169  T
Q  308 aatggttaagttaacagacagacttcataacgttctg 344  Q
    |||| ||||||||| |  | ||||||| |||||||||    
T  15622170 aatgattaagttaaaaagctgacttcagaacgttctg 15622206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 40922949 - 40922848
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | ||||||    
T  40922949 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttgg 40922851  T
Q  308 aat 310  Q
    |||    
T  40922850 aat 40922848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 209 - 320
Target Start/End: Original strand, 13791987 - 13792098
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagg-ggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||| |||||||| |||||||||| |||||||||||||||||| |||||||||| ||| ||  |||||||| | |||||||||||| | ||||||    
T  13791987 tgaagtagacaaaatagtcacaaggaaggtggggtttgaattgtgaccttttaaaaatt-aacctgtaacttaaaattaattctcaagttgtttacttgg 13792085  T
Q  308 aatggttaagtta 320  Q
    ||| |||||||||    
T  13792086 aatagttaagtta 13792098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 320
Target Start/End: Complemental strand, 41527406 - 41527296
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| ||||| |||||||  ||||||| |||||||||||||| ||||| ||  |||||||| | |||||||||||| | |||||||    
T  41527406 tgaagtagataaaatagttacaagaaagggggacttgaattatgaccctttaaaaa-taaacttgtaacttaaaattgattctcaagttgtttacttgga 41527308  T
Q  309 atggttaagtta 320  Q
    || |||||||||    
T  41527307 atagttaagtta 41527296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 206 - 310
Target Start/End: Original strand, 17983823 - 17983928
Alignment:
Q  206 ggttgaagtagataaaatagtaacaaggaaggggggttt--gaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataac 303  Q
    ||||||||||||||||||||| |||||||||||||| ||  |||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | ||    
T  17983823 ggttgaagtagataaaatagtcacaaggaagggggggtttggaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttac 17983921  T
Q  304 ttggaat 310  Q
    |||||||    
T  17983922 ttggaat 17983928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 3475043 - 3475100
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaatta 267  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  3475043 tgaagtagataaaatagtcacaaggaagggg-gtttgaattgtgaccctttaaaaatta 3475100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 284
Target Start/End: Original strand, 4836988 - 4837065
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaag 284  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||||||||| ||||||||||||| ||  |||||||||    
T  4836988 ttgaagtagataaaatagtcacaagaaagggggggtttgaattgtgacccattaaaaattaaacctgtaacttaaaag 4837065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 18104375 - 18104478
Alignment:
Q  208 ttgaagtagataaaatagtaacaagg-aaggggggtttg-aattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataactt 305  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | ||||    
T  18104375 ttgaagtagataaaatagtcacaagggaaggggggtttggaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttactt 18104473  T
Q  306 ggaat 310  Q
    |||||    
T  18104474 ggaat 18104478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 209 - 320
Target Start/End: Original strand, 53945054 - 53945165
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||| ||||||| | | ||| |||||||||||||||||||| |||||||||| | ||| ||| | |||||| | |||||||||| ||| |||||||    
T  53945054 tgaagtaggtaaaataatcataagaaaggggggtttgaattgtgatcctttaaaaaattaacctgcaatttaaaattaattctcaagtggattacttgga 53945153  T
Q  309 atggttaagtta 320  Q
    |  |||||||||    
T  53945154 aaagttaagtta 53945165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 16209914 - 16209975
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaa 268  Q
    |||||||| |||||||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  16209914 ttgaagtatataaaatagtcacaaggaagggggggtttgaattgtgatcctttaaaaattaa 16209975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 321
Target Start/End: Complemental strand, 8847737 - 8847658
Alignment:
Q  242 tttgaattgtgacccttt-aaaaattaaacatgccacttaaaagttattctcaagttgataacttggaatggttaagttaa 321  Q
    |||||||||||||||||| ||||||||||| ||  | |||||| | ||||||||||||| |||||| ||||||||||||||    
T  8847737 tttgaattgtgacccttttaaaaattaaacttgtaaattaaaaataattctcaagttga-aacttgaaatggttaagttaa 8847658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 267
Target Start/End: Original strand, 14599607 - 14599667
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaa-ggggggtttgaattgtgaccctttaaaaatta 267  Q
    ||||||||||||| ||||| |||||||| ||||| ||| ||||||||||||||||||||||    
T  14599607 ttgaagtagataatatagtcacaaggaatgggggtttttaattgtgaccctttaaaaatta 14599667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 267
Target Start/End: Original strand, 15842482 - 15842521
Alignment:
Q  228 acaaggaaggggggtttgaattgtgaccctttaaaaatta 267  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  15842482 acaagaaaagggggtttgaattgtgaccctttaaaaatta 15842521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 267
Target Start/End: Complemental strand, 9338191 - 9338161
Alignment:
Q  237 gggggtttgaattgtgaccctttaaaaatta 267  Q
    |||||||||||||||||||||||||||||||    
T  9338191 gggggtttgaattgtgaccctttaaaaatta 9338161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 268
Target Start/End: Complemental strand, 16398343 - 16398309
Alignment:
Q  234 aaggggggtttgaattgtgaccctttaaaaattaa 268  Q
    |||||| ||||||||||||||||||||||||||||    
T  16398343 aaggggagtttgaattgtgaccctttaaaaattaa 16398309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 23623581 - 23623545
Alignment:
Q  228 acaaggaaggggggtttgaattgtgaccctttaaaaa 264  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  23623581 acaagaaaggggggtttgaattgtgacccttttaaaa 23623545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 1e-81; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 5614404 - 5614581
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  5614404 ttgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattaaacctgccacttaaaaggtattctcaagttgataacttgg 5614503  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  5614504 aatggttaagttaacagacagacttcagaacgttctgaagtgttagtataaaaacaatttaaataattaaatgtgttt 5614581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 209 - 385
Target Start/End: Complemental strand, 31825827 - 31825652
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| | || ||||||||||||||||||||||||||||||||||    
T  31825827 tgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaa-ttaatcctgtcacttaaaagttattctcaagttgataacttgga 31825729  T
Q  309 atggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  31825728 atggttaagttaacagacagacttcagaacgttctgaagtgttagtataaaaacaatttaaataattaaatgtgttt 31825652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 12826328 - 12826506
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaa-ggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| | |||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||     
T  12826328 ttgaagtagataaaatagtcataaggaatggggggtttgaattgtgaccccttaaaaattaaacatgtcacttaaaagttattctcaagttgaaaactta 12826427  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  12826428 gaatggttaagttaacagacagacttcagaacgttctgaagtgttagtataaaaacaatttaaataattaaatgtgttt 12826506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 13284657 - 13284835
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  13284657 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaatcctgccacttaaaagttattctcaagttgataacttg 13284756  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
     |||||||||| ||||||| |||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  13284757 caatggttaaggtaacagatagacttcagaacgttctgaagtcttagtataaaaacaatttaaataattaaatgtgttt 13284835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 208 - 383
Target Start/End: Complemental strand, 42596494 - 42596318
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaa-ggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||    
T  42596494 ttgaagtagataaaatagtcacaaggaatggggggtttcaattgtgaccctttaaaaattaaacctgtcacttaaaagttattctcaagttgaaaacttg 42596395  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgt 383  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||| |||||||||||||||||||    
T  42596394 gaatggttaagttaacagacagacttcagaacgttctgaagtgttagtataaaaacagtttaaataattaaatgtgt 42596318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 208 - 385
Target Start/End: Complemental strand, 41028708 - 41028533
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||| ||||  |||||||||||  |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||     
T  41028708 ttgaagtagataaagtagtcccaaggaagggg--tttgaattgtgaccctttaaaaattaaacatatcacttaaaagttattctcaagttgaaaacttga 41028611  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    |||| | |||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  41028610 aatgatcaagttaacagacagacttcagaacgttctgaagtgttagtataaaaacaatttaaataattaaatgtgttt 41028533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 208 - 383
Target Start/End: Complemental strand, 12088441 - 12088267
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||   ||||||||||||||||||||||  |||||||    
T  12088441 ttgaagtagataaaatagtcacaaggaaggggagtttgaattgtgacccttaaaaaattaaacatgtagcttaaaagttattctcaagttgtaaacttgg 12088342  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgt 383  Q
    ||||| |||||| |||||||||||||| |||||| |||||| |||||  ||| ||| |||||||||||||||||||    
T  12088341 aatgg-taagttgacagacagacttcagaacgttatgaagtgttagtgcaaaaacactttaaataattaaatgtgt 12088267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 208 - 345
Target Start/End: Original strand, 24539416 - 24539551
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| ||||||    
T  24539416 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttg 24539514  T
Q  307 gaatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||||  | |||||||||| ||||||||||    
T  24539515 gaatggttaagtta--aaacagacttcagaacgttctga 24539551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 208 - 345
Target Start/End: Complemental strand, 45554667 - 45554531
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaa-ggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||| | ||||||    
T  45554667 ttgaagtagataaaatagtcacaaggaatggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttca-aacttg 45554569  T
Q  307 gaatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||||| || ||||||||| ||||||||||    
T  45554568 gaatggttaagttaaaag-cagacttcagaacgttctga 45554531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 209 - 343
Target Start/End: Complemental strand, 19801208 - 19801076
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |   |||||||| | ||||||||||||| ||||||||    
T  19801208 tgaagtagataaaacagtcacaaggaaggggggtttgaattgtgaccctttaaaaattaaacctataacttaaaattgattctcaagttga-aacttgga 19801110  T
Q  309 atggttaagttaacagacagacttcataacgttct 343  Q
    ||||||||||||| || ||||||||| | ||||||    
T  19801109 atggttaagttaaaag-cagacttcagatcgttct 19801076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 208 - 341
Target Start/End: Complemental strand, 19586856 - 19586725
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |   |||||||| | ||||||||||||| |||||||    
T  19586856 ttgaagtggataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaactaaacctataacttaaaattgattctcaagttga-aacttgg 19586758  T
Q  308 aatggttaagttaacagacagacttcataacgtt 341  Q
    |||||||||||||| || ||||||||| ||||||    
T  19586757 aatggttaagttaaaag-cagacttcagaacgtt 19586725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 209 - 351
Target Start/End: Complemental strand, 9008054 - 9007912
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||| ||  |||||||| | |||||||||||| | |||||||    
T  9008054 tgaagtagataaaatactcacaaggaaggggggtctgaattgtgaccctttaaaaattaaacttgtaacttaaaaatgattctcaagttgtttacttgga 9007955  T
Q  309 atggttaagttaacagacagacttcataacgttctgaagtatt 351  Q
    || |||||||||   ||  ||||||| |||||| |||||||||    
T  9007954 atagttaagttagtggaatgacttcagaacgttatgaagtatt 9007912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 207 - 348
Target Start/End: Complemental strand, 43984771 - 43984630
Alignment:
Q  207 gttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataactt 305  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||  |||||||||| |||||||||| | | ||||    
T  43984771 gttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaacc-tgaaacttaaaagtgattctcaagtagtttactt 43984673  T
Q  306 ggaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||||| |||||||||| |  | ||||||| |||||||||||||    
T  43984672 ggaatagttaagttaatattctgacttcagaacgttctgaagt 43984630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 348
Target Start/End: Complemental strand, 27990204 - 27990064
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||  |||||||||| |||||||||| | | |||||    
T  27990204 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaacc-tgaaacttaaaagtgattctcaagtagtttacttg 27990106  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||| |  | ||||||| |||||||||||||    
T  27990105 gaatagttaagttaatattctgacttcagaacgttctgaagt 27990064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 205 - 346
Target Start/End: Original strand, 7018357 - 7018497
Alignment:
Q  205 aggttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataact 304  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | | ||  |||||||||| |||||||||| | | |||    
T  7018357 aggttgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaatt-atcctgaaacttaaaagtgattctcaagtagtttact 7018455  T
Q  305 tggaatggttaagttaacagacagacttcataacgttctgaa 346  Q
    |||||| |||||| ||| |  | ||||||| | |||||||||    
T  7018456 tggaatagttaaggtaatattctgacttcagagcgttctgaa 7018497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 205 - 346
Target Start/End: Original strand, 7033715 - 7033855
Alignment:
Q  205 aggttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataact 304  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | | ||  |||||||||| |||||||||| | | |||    
T  7033715 aggttgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaatt-atcctgaaacttaaaagtgattctcaagtagtttact 7033813  T
Q  305 tggaatggttaagttaacagacagacttcataacgttctgaa 346  Q
    |||||| |||||| ||| |  | ||||||| | |||||||||    
T  7033814 tggaatagttaaggtaatattctgacttcagagcgttctgaa 7033855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 348
Target Start/End: Complemental strand, 13130946 - 13130807
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||| | | ||||||    
T  13130946 tgaagtagataaaatagtcacaaggaaggggggatttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagtagtttacttgg 13130848  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||||   | ||||||| |||||||||||||    
T  13130847 aatagttaagttaactttctgacttcagaacgttctgaagt 13130807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 207 - 310
Target Start/End: Original strand, 5380767 - 5380869
Alignment:
Q  207 gttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | |||||    
T  5380767 gttgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttg 5380865  T
Q  307 gaat 310  Q
    ||||    
T  5380866 gaat 5380869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 207 - 348
Target Start/End: Original strand, 9534190 - 9534330
Alignment:
Q  207 gttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||  | ||  |||||||| | ||||||||| ||   |||||    
T  9534190 gttgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaatttatcc-tgaaacttaaaaatgattctcaagctgtctacttg 9534288  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||||   | ||||||| |||||||||||||    
T  9534289 gaatagttaagttaactttctgacttcagaacgttctgaagt 9534330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 208 - 348
Target Start/End: Original strand, 9544474 - 9544613
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||  | ||  |||||||| | ||||||||| ||   ||||||    
T  9544474 ttgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaatttatcc-tgaaacttaaaaatgattctcaagctgtctacttgg 9544572  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||||   | ||||||| |||||||||||||    
T  9544573 aatagttaagttaactttctgacttcagaacgttctgaagt 9544613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 209 - 297
Target Start/End: Original strand, 15987617 - 15987705
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagtt 297  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||   |||||||||||    
T  15987617 tgaagtagataaaatagtcacaaggaaggggggtttgaattgtgacactttaaaaattaaacatgtaacttaaaatagattctcaagtt 15987705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 209 - 348
Target Start/End: Complemental strand, 14947220 - 14947081
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggg-gtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| ||||| ||||||||  | ||  |||||||||| |||||||||| | | ||||||    
T  14947220 tgaagtagataaaatagtcacaaggaagggggagtttgaattgtggcccttaaaaaattatcc-tgaaacttaaaagtgattctcaagtagtttacttgg 14947122  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||| |  | ||||||| |||||||||||||    
T  14947121 aatagttaagttaatattctgacttcagaacgttctgaagt 14947081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 209 - 348
Target Start/End: Complemental strand, 15374814 - 15374675
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggg-gtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| ||||| ||||||||  | ||  |||||||||| |||||||||| | | ||||||    
T  15374814 tgaagtagataaaatagtcacaaggaagggggagtttgaattgtggcccttaaaaaattatcc-tgaaacttaaaagtgattctcaagtagtttacttgg 15374716  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||| |  | ||||||| |||||||||||||    
T  15374715 aatagttaagttaatattctgacttcagaacgttctgaagt 15374675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 5390405 - 5390507
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | |||||    
T  5390405 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttg 5390503  T
Q  307 gaat 310  Q
    ||||    
T  5390504 gaat 5390507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 8502156 - 8502054
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | |||||    
T  8502156 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttg 8502058  T
Q  307 gaat 310  Q
    ||||    
T  8502057 gaat 8502054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 8512626 - 8512524
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | |||||    
T  8512626 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttg 8512528  T
Q  307 gaat 310  Q
    ||||    
T  8512527 gaat 8512524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 44898406 - 44898303
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg--tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataactt 305  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | ||||    
T  44898406 ttgaagtagataaaatagtcacaaggaaggggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttactt 44898308  T
Q  306 ggaat 310  Q
    |||||    
T  44898307 ggaat 44898303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 44908831 - 44908728
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg--tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataactt 305  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | ||||    
T  44908831 ttgaagtagataaaatagtcacaaggaaggggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttactt 44908733  T
Q  306 ggaat 310  Q
    |||||    
T  44908732 ggaat 44908728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 6535591 - 6535489
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||   | ||  |||||||||| |||||||||||| | |||||    
T  6535591 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaatt-gtcctgaaacttaaaagtgattctcaagttgtttacttg 6535493  T
Q  307 gaat 310  Q
    ||||    
T  6535492 gaat 6535489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 11625319 - 11625421
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |||||    
T  11625319 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttg 11625417  T
Q  307 gaat 310  Q
    ||||    
T  11625418 gaat 11625421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 16141418 - 16141520
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |||||    
T  16141418 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttg 16141516  T
Q  307 gaat 310  Q
    ||||    
T  16141517 gaat 16141520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 46498221 - 46498119
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |||||    
T  46498221 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttg 46498123  T
Q  307 gaat 310  Q
    ||||    
T  46498122 gaat 46498119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 6545911 - 6545810
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||   | ||  |||||||||| |||||||||||| | ||||||    
T  6545911 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaatt-gtcctgaaacttaaaagtgattctcaagttgtttacttgg 6545813  T
Q  308 aat 310  Q
    |||    
T  6545812 aat 6545810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 345
Target Start/End: Complemental strand, 8341312 - 8341180
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| ||||||| |||||  |||||||||||||||||||||||||  || |  |||| |||||| ||||||||||||| |||||||    
T  8341312 tgaagtagataaaatagtcacaaggagggggg--ttgaattgtgaccctttaaaaattattca-gtaacttaaaaagtaattctcaagttga-aacttgg 8341217  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    |||| |||||||||| |||||| || | ||||||||||    
T  8341216 aatgtttaagttaac-gacagattttagaacgttctga 8341180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 16130870 - 16130971
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | ||||||    
T  16130870 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttgg 16130968  T
Q  308 aat 310  Q
    |||    
T  16130969 aat 16130971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 46508832 - 46508731
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | ||||||    
T  46508832 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttgg 46508734  T
Q  308 aat 310  Q
    |||    
T  46508733 aat 46508731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 26308224 - 26308162
Alignment:
Q  207 gttgaagtagataaaatagtaacaaggaagggggg--tttgaattgtgaccctttaaaaatta 267  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||    
T  26308224 gttgaagtagataaaatagtcacaaggaaggggggggtttgaattgtgaccctttaaaaatta 26308162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 32099487 - 32099385
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||  | ||  |||||||| | |||||||||||| | |||||    
T  32099487 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgactctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttg 32099389  T
Q  307 gaat 310  Q
    ||||    
T  32099388 gaat 32099385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 348
Target Start/End: Complemental strand, 42622199 - 42622062
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||| | | ||||  |    
T  42622199 tgaagtagataaaatagtcacaaggaaagggg-tttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagtagtttactttta 42622102  T
Q  309 atggttaagttaacagacagacttcataacgttctgaagt 348  Q
    || |||||||||||   | ||||||| || ||||||||||    
T  42622101 atagttaagttaactttctgacttcagaatgttctgaagt 42622062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 5928241 - 5928140
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||| | | |   |||||||||| |||||||||||| | ||||||    
T  5928241 tgaagttgataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaatt-atcctaaaacttaaaagtgattctcaagttgtttacttgg 5928143  T
Q  308 aat 310  Q
    |||    
T  5928142 aat 5928140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 267
Target Start/End: Complemental strand, 26304663 - 26304602
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg--tttgaattgtgaccctttaaaaatta 267  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||    
T  26304663 ttgaagtagataaaatagtcacaaggaaggggggggtttgaattgtgaccctttaaaaatta 26304602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 267
Target Start/End: Original strand, 26362155 - 26362216
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg--ggtttgaattgtgaccctttaaaaatta 267  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||    
T  26362155 ttgaagtagataaaatagtcacaaggaaggggggggtttgaattgtgaccctttaaaaatta 26362216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 32109923 - 32109822
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||  | ||  |||||||| | |||||||||||| | ||||||    
T  32109923 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgactctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttgg 32109825  T
Q  308 aat 310  Q
    |||    
T  32109824 aat 32109822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 209 - 348
Target Start/End: Original strand, 2990840 - 2990980
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggg-gggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||| |||||||| ||||| || || |||||||||||| ||||||||||||| | ||| |   |||||||| | |||||||||||| | ||||||    
T  2990840 tgaagtagaaaaaatagtcacaagaaaaggagggtttgaattgcgaccctttaaaaaattaacctataacttaaaattaattctcaagttgtttacttgg 2990939  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| ||||||||||   |   ||||||||||||||||||||    
T  2990940 aatagttaagttaatgaaattacttcataacgttctgaagt 2990980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 10610787 - 10610732
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaa 264  Q
    ||||||| |||||||||| |||| |||||||| |||||||||||||||||||||||    
T  10610787 tgaagtaaataaaatagtcacaaagaagggggatttgaattgtgaccctttaaaaa 10610732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 12771195 - 12771137
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaa 268  Q
    ||||||| |||| ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  12771195 tgaagtaaataatatagtcacaaggaaggggg-tttgaattgtgaccctttaaaaattaa 12771137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 14247129 - 14247188
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaa 268  Q
    |||||||||||||||||| | |||| |||| || ||||||||||||||||||||||||||    
T  14247129 tgaagtagataaaatagtcataagggagggaggattgaattgtgaccctttaaaaattaa 14247188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 10417023 - 10416956
Alignment:
Q  276 acttaaaagttattctcaagttgataacttggaatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||| || || |||||| ||||||||||    
T  10417023 acttaaaattgattctcaagttga-aacttggaatggttaagttaaaag-caaacttcagaacgttctga 10416956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 259
Target Start/End: Complemental strand, 40704252 - 40704199
Alignment:
Q  206 ggttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgacccttt 259  Q
    |||| ||||||||| |||||| | ||| || |||||||||||||||||||||||    
T  40704252 ggttaaagtagatataatagtcataagaaatgggggtttgaattgtgacccttt 40704199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 154; Significance: 1e-81; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 24872176 - 24872353
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  24872176 ttgaagtagataaaatagtcacaaggaaggggagtttgaattgtgaccctttaaaaattaatcctgccacttaaaagttattctcaagttgataacttgg 24872275  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24872276 aatggttaagttaacagacagacttcagaacgttctgaagtattagtataaacacaatttgaataattaaatgtgttt 24872353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 49386332 - 49386509
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  49386332 ttgaagtagataaaatagtcacaaggaaagggggtttgaattgtgaccctttaaaaattaaacctgtcacttaaaagttattctcaagttgataacttgg 49386431  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  49386432 aatggttaagttaacagacagacttcagaacgttctgaagtgttagtataaaaacaatttaaataattaaatgtgttt 49386509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 208 - 385
Target Start/End: Complemental strand, 24814943 - 24814766
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||| |||||||||| | |||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||     
T  24814943 ttgaagtaaataaaatagtcataaggaaagggggtttgaattgtgaccctttaaaaattaaacctgtcacttaaaagttattctcaagttgaaaacttga 24814844  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  24814843 aatggttaagttaacagacagacttcaaaacgttctgaagtgttagtataaaaacagtttaaataattaaatgtgttt 24814766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 13118399 - 13118574
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| |||||||    
T  13118399 ttgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgg 13118497  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    |||||||||||||| || |||||||||||||||||||| || | |||  ||| ||| |||||  || |||||||||||    
T  13118498 aatggttaagttaaaag-cagacttcataacgttctgatgtctgagtgcaaaaacagtttaataaagtaaatgtgttt 13118574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 208 - 345
Target Start/End: Original strand, 2487828 - 2487962
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| |||||||    
T  2487828 ttgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgg 2487926  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||||||||||  | |||||||||| ||||||||||    
T  2487927 aatggttaagtta--aaacagacttcagaacgttctga 2487962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 4781402 - 4781536
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| |||||| |    
T  4781402 tgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgaa 4781500  T
Q  309 atggttaagttaacagacagacttcataacgttctga 345  Q
    |||| |||||||| || ||||||||| ||||||||||    
T  4781501 atggctaagttaaaag-cagacttcagaacgttctga 4781536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 348
Target Start/End: Complemental strand, 4372650 - 4372510
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||  |||||||||| |||||||||| | | |||||    
T  4372650 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaacc-tgaaacttaaaagtgattctcaagtagtttacttg 4372552  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||| |  | ||||||| |||||||||||||    
T  4372551 gaatagttaagttaatattctgacttcagaacgttctgaagt 4372510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 209 - 385
Target Start/End: Original strand, 14801383 - 14801557
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaa-gttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  | ||  |||||||| || ||||||||||||| |||||||    
T  14801383 tgaagtagataaaatagtcacaagaaaggggggtttgaattgtgaccctttaaaaattatcc-tgtaacttaaaaagtaattctcaagttga-aacttgg 14801480  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||||||||||||||  ||||||||||| |||||||||| || | |||  ||| ||| |||||  || |||||||||||    
T  14801481 aatggttaagttaat-gacagacttcagaacgttctgatgtctgagtgcaaaaacagtttaacaaagtaaatgtgttt 14801557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 236 - 345
Target Start/End: Original strand, 19827213 - 19827320
Alignment:
Q  236 ggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttggaatggttaagttaacagacagacttcat 335  Q
    ||||||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| |||||||||||||||||||||||| |||||||||     
T  19827213 ggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttggaatggttaagttaacag-cagacttcag 19827310  T
Q  336 aacgttctga 345  Q
    ||||||||||    
T  19827311 aacgttctga 19827320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 51977440 - 51977615
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||| ||||||||||| |||| ||| |||||||||||||||||| ||||||||||||||  ||  |||||||| | ||||||||||||| |||||||    
T  51977440 ttgaagttgataaaatagtcacaaagaaagggggtttgaattgtgactctttaaaaattaaatctgtaacttaaaattgattctcaagttga-aacttgg 51977538  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    |||||||||||||| || ||||||||| |||||| ||| || | |||  ||| |||||||||  || |||||||||||    
T  51977539 aatggttaagttaaaag-cagacttcagaacgttatgatgtctgagtgcaaaaacaatttaatgaagtaaatgtgttt 51977615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 209 - 348
Target Start/End: Complemental strand, 4382390 - 4382251
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||  |||||||||| |||||||||| | | ||||||    
T  4382390 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaacc-tgaaacttaaaagtgattctcaagtagtttacttgg 4382292  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||| |  | ||||||| |||||||||||||    
T  4382291 aatagttaagttaatattctgacttcagaacgttctgaagt 4382251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 207 - 345
Target Start/End: Original strand, 20743659 - 20743798
Alignment:
Q  207 gttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataactt 305  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||   ||||||  | ||||| ||||||| |||||    
T  20743659 gttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaacctgtagcttaaacttgattcttaagttga-aactt 20743757  T
Q  306 gga--atggttaagttaacagacagacttcataacgttctga 345  Q
    |||  ||||||||||||| || ||||||||| || |||||||    
T  20743758 ggaatatggttaagttaaaag-cagacttcagaaagttctga 20743798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 208 - 348
Target Start/End: Original strand, 10943 - 11082
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| | ||||||  |||||||||||||||||||||||||| |||  | ||  |||||||||| |||||||||| | | ||||||    
T  10943 ttgaagtagataaaatagtcataaggaataggggtttgaattgtgaccctttaaaatttatcc-tgaaacttaaaagtgattctcaagtagtttacttgg 11041  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||||   | ||||||| |||||||||||||    
T  11042 aatagttaagttaactttctgacttcagaacgttctgaagt 11082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 208 - 345
Target Start/End: Complemental strand, 24773874 - 24773740
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||  | | | ||  |||| |||||| ||||||||||||| ||||||    
T  24773874 ttgaagtagataaaatagttacaaagaaggggtgtttgaattgtgaccctttaaaa--ttatcctgtaacttaaaaagtaattctcaagttga-aacttg 24773778  T
Q  307 gaatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||||||| ||||  ||||||||||| ||||||||||    
T  24773777 gaatggttaaattaa-tgacagacttcagaacgttctga 24773740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 345
Target Start/End: Complemental strand, 20294141 - 20294011
Alignment:
Q  212 agtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttggaat 310  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| | | ||  |||| |||||| |||| |||||||| ||||||||||    
T  20294141 agtagataaaatagtcacaaggaaggggg-tttgaattgtgaccctttaaaaatt-atcctgtaacttcaaaagtaattcgcaagttga-aacttggaat 20294045  T
Q  311 ggttaagttaacagacagacttcataacgttctga 345  Q
    |||||||||||  | ||||||||| ||||||||||    
T  20294044 ggttaagttaa-tggcagacttcagaacgttctga 20294011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 209 - 321
Target Start/End: Complemental strand, 20493130 - 20493020
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||| || ||  |||||||||| ||||||||| ||   |||||||    
T  20493130 tgaagtagataaaatagtcacaaggaag-ggggtttgaattgtgaccctttataaattatac-tgaaacttaaaagtgattctcaagatgtctacttgga 20493033  T
Q  309 atggttaagttaa 321  Q
    || ||||||||||    
T  20493032 atagttaagttaa 20493020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 682767 - 682869
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |||||    
T  682767 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttg 682865  T
Q  307 gaat 310  Q
    ||||    
T  682866 gaat 682869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 6423414 - 6423312
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |||||    
T  6423414 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattattc-tgaaacttaaaattgattctcaagttgtttacttg 6423316  T
Q  307 gaat 310  Q
    ||||    
T  6423315 gaat 6423312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 8973953 - 8973851
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |||||    
T  8973953 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttg 8973855  T
Q  307 gaat 310  Q
    ||||    
T  8973854 gaat 8973851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 9538242 - 9538140
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |||||    
T  9538242 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttg 9538144  T
Q  307 gaat 310  Q
    ||||    
T  9538143 gaat 9538140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 1684210 - 1684311
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | ||||||    
T  1684210 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttgg 1684308  T
Q  308 aat 310  Q
    |||    
T  1684309 aat 1684311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 8984507 - 8984406
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | ||||||    
T  8984507 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttgg 8984409  T
Q  308 aat 310  Q
    |||    
T  8984408 aat 8984406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 9548567 - 9548466
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | ||||||    
T  9548567 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttgg 9548469  T
Q  308 aat 310  Q
    |||    
T  9548468 aat 9548466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 12794400 - 12794501
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | ||||||    
T  12794400 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttgg 12794498  T
Q  308 aat 310  Q
    |||    
T  12794499 aat 12794501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 16334375 - 16334476
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | ||||||    
T  16334375 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttgg 16334473  T
Q  308 aat 310  Q
    |||    
T  16334474 aat 16334476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 23502827 - 23503008
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggg-gtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagt--tgat-aac 303  Q
    |||||||||||| |||||| |||||||||| || | || |||||||||||||||||| |||||||||   ||||||| | ||| ||||||  |||| |||    
T  23502827 ttgaagtagatataatagttacaaggaaggaggagatttaattgtgaccctttaaaatttaaacatgtaccttaaaattgattatcaagttatgatcaac 23502926  T
Q  304 ttggaatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||||||| ||||||||| || |  ||||||| || |||||||||| ||  |  ||| | |||||||||||||||||||||||    
T  23502927 ttggaatagttaagttagcaaaatgacttcagaatgttctgaagtgtttatgcaaaaataatttaaataattaaatgtgttt 23503008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 322
Target Start/End: Complemental strand, 25434218 - 25434106
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||| | | ||  || | ||||| |||||||||||| | ||||||    
T  25434218 ttgaagtagataaaatggtcacagggaaggggggtttgaattgtgaccctttaaaaatt-atcctgaaac-tcaaagtgattctcaagttgtttacttgg 25434121  T
Q  308 aatggttaagttaac 322  Q
    ||| |||||||||||    
T  25434120 aatagttaagttaac 25434106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 348
Target Start/End: Original strand, 10002380 - 10002520
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| | | ||  |||||||| | ||||||||| ||    ||||    
T  10002380 ttgaagtagataaaatagtcacaatgaagggggggtttgaattgtgaccctttaaaaatt-atcctgaaacttaaaaatgattctcaagctgtctgcttg 10002478  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||||   | ||||||| |||||||||||||    
T  10002479 gaatagttaagttaactttctgacttcagaacgttctgaagt 10002520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 208 - 267
Target Start/End: Complemental strand, 6433841 - 6433781
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaatta 267  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  6433841 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaatta 6433781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 321
Target Start/End: Original strand, 10506818 - 10506922
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||| |||||||||||||| |||||||||||||  ||||||||||||||||||||||||         |||||||| | |||||||||||| | ||||||    
T  10506818 ttgacgtagataaaatagtcacaaggaagggggacttgaattgtgaccctttaaaaatt---------acttaaaattaattctcaagttgtttacttgg 10506908  T
Q  308 aatggttaagttaa 321  Q
    |||| |||||||||    
T  10506909 aatgtttaagttaa 10506922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 321
Target Start/End: Original strand, 10507632 - 10507736
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||| |||||||||||||| |||||||||||||  ||||||||||||||||||||||||         |||||||| | |||||||||||| | ||||||    
T  10507632 ttgacgtagataaaatagtcacaaggaagggggacttgaattgtgaccctttaaaaatt---------acttaaaattaattctcaagttgtttacttgg 10507722  T
Q  308 aatggttaagttaa 321  Q
    |||| |||||||||    
T  10507723 aatgtttaagttaa 10507736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 16697765 - 16697866
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||| ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | ||||||    
T  16697765 tgaagttgataaaatagtcacaagaaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttgg 16697863  T
Q  308 aat 310  Q
    |||    
T  16697864 aat 16697866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 321
Target Start/End: Complemental strand, 16127591 - 16127480
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggg-gtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||| |||||||||| |||||||| | || |||||||||||||||||||||||||| ||| ||| |||||||| | |||||||||| | | ||||||    
T  16127591 tgaagtaaataaaatagtcacaaggaatgaggagtttgaattgtgaccctttaaaaatt-aacttgcaacttaaaa-taattctcaagtggtttacttgg 16127494  T
Q  308 aatggttaagttaa 321  Q
    || ||||| |||||    
T  16127493 aaaggttatgttaa 16127480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 38816903 - 38816964
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaag-gggggtttgaattgtgaccctttaaaaattaa 268  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||||||    
T  38816903 ttgaagtagataaaatagtcacaaggaattgggggtttgaattgtgacccttcaaaaattaa 38816964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 5654582 - 5654686
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg----tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataact 304  Q
    |||||| ||||||||||| ||||||||||||||    ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |||    
T  5654582 tgaagttgataaaatagtcacaaggaaggggggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttact 5654680  T
Q  305 tggaat 310  Q
    ||||||    
T  5654681 tggaat 5654686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 4023079 - 4023134
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaag-gggggtttgaattgtgaccctttaaaa 263  Q
    |||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  4023079 tgaagtagataaaatagtcacaagaaagagggggtttgaattgtgaccctttaaaa 4023134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 11460934 - 11460878
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaa 264  Q
    ||||||||||||||||||| ||||| || |||||||| |||||||||| ||||||||    
T  11460934 ttgaagtagataaaatagtcacaagaaatgggggtttaaattgtgaccatttaaaaa 11460878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 17735022 - 17734984
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaa 247  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  17735022 tgaagtagataaaatagtcacaaggaaggggggtttgaa 17734984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 19036291 - 19036253
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaa 247  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  19036291 tgaagtagataaaatagtcacaaggaaggggggtttgaa 19036253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 269
Target Start/End: Original strand, 11043659 - 11043719
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaa 269  Q
    ||||||||||| |||||| ||||| ||  ||||||||||||| |||||||| |||||||||    
T  11043659 tgaagtagatataatagtcacaagaaaaaggggtttgaattgggacccttttaaaattaaa 11043719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 4952278 - 4952242
Alignment:
Q  228 acaaggaaggggggtttgaattgtgaccctttaaaaa 264  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  4952278 acaagaaaggggggtttgaattgtgacccttttaaaa 4952242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 354
Target Start/End: Original strand, 13430556 - 13430620
Alignment:
Q  287 attctcaagttgataacttggaatggttaagttaacagacagacttcataacgttctgaagtattagt 354  Q
    ||||||||||||| ||||||||||||||||||||  | || ||||||| || |||||||||| |||||    
T  13430556 attctcaagttga-aacttggaatggttaagtta--aaactgacttcaaaatgttctgaagtgttagt 13430620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 19827177 - 19827209
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg 241  Q
    |||||||||||||||||| ||||||||||||||    
T  19827177 tgaagtagataaaatagtcacaaggaagggggg 19827209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 208 - 298
Target Start/End: Complemental strand, 20280729 - 20280645
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttg 298  Q
    |||||||||||||||||||  ||||  ||||||| ||||||||| |||||||||||||| | ||||| |||||||| | ||||||| ||||    
T  20280729 ttgaagtagataaaatagt--caag--agggggg-ttgaattgtaaccctttaaaaatt-atcatgcaacttaaaattaattctcacgttg 20280645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 28367342 - 28367378
Alignment:
Q  228 acaaggaaggggggtttgaattgtgaccctttaaaaa 264  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  28367342 acaagaaaggggggtttgaattgtgacccttttaaaa 28367378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 153; Significance: 6e-81; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 209 - 385
Target Start/End: Original strand, 27158874 - 27159050
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  27158874 tgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattaatcctgccacttaaaagttattctcaagttgataacttgga 27158973  T
Q  309 atggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  27158974 atggttaagttaacagacagacttcagaacgttctgaagtattagtgtaaacacaatttgaataattaaatgtgttt 27159050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 27169220 - 27169398
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  27169220 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaatcctgccacttaaaagttattctcaagttgataacttg 27169319  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  27169320 gaatggttaagttaacagacagacttcagaacgttctgaagtattagtgtaaacacaatttgaataattaaatgtgttt 27169398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 209 - 385
Target Start/End: Original strand, 22907745 - 22907921
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||    
T  22907745 tgaagtagataaaatagtcacaaggagggggggtttgaattgtgaccctttaaaaattaaacctgtcacttaaaagttattctcaagttgaaaacttgga 22907844  T
Q  309 atggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||| ||||||||||| |||||||||| |||||| |||||| |||||||||| ||| |||||||||||||||||||||    
T  22907845 atgattaagttaacaaacagacttcagaacgttatgaagtgttagtataaaaacagtttaaataattaaatgtgttt 22907921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 208 - 382
Target Start/End: Complemental strand, 19343425 - 19343252
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||     
T  19343425 ttgaagtagataaaatagtcacaaggaaggggg-tttgaattgtgaccctttaaaaattaaacctgtcacttaaaagttattctcaagttgaaaacttga 19343327  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtg 382  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||  |||||||||||||||||    
T  19343326 aatggttaagttaaccgacagacttcataacgttctgaagtgttagtataaaaacagattaaataattaaatgtg 19343252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 211 - 385
Target Start/End: Complemental strand, 22903248 - 22903073
Alignment:
Q  211 aagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttggaat 310  Q
    |||||||| ||||| | |||||||||||||||||||||||||| |||||||||||||||| |  ||||||||||||||||||||||||| |||||| |||    
T  22903248 aagtagattaaatattcacaaggaaggggggtttgaattgtgaacctttaaaaattaaacctatcacttaaaagttattctcaagttgaaaacttgaaat 22903149  T
Q  311 ggttaagttaacagacagacttcataacgttctgaagtattagtat-aaacacaatttaaataattaaatgtgttt 385  Q
    |||||||||||||||||||||||| |||| ||| |||| ||||||| ||| ||| |||||||||||||||||||||    
T  22903148 ggttaagttaacagacagacttcagaacgatctaaagtgttagtataaaaaacagtttaaataattaaatgtgttt 22903073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 208 - 345
Target Start/End: Complemental strand, 32877819 - 32877684
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| |||||||    
T  32877819 ttgaagtagataaaatagtcacaaggaatgggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgg 32877721  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||||||||||| || ||||||||| ||||||||||    
T  32877720 aatggttaagttaaaag-cagacttcagaacgttctga 32877684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 208 - 345
Target Start/End: Original strand, 16901089 - 16901225
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| ||||||    
T  16901089 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttg 16901187  T
Q  307 gaatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||||| || ||||||||| ||||||||||    
T  16901188 gaatggttaagttaaaag-cagacttcagaacgttctga 16901225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 208 - 345
Target Start/End: Original strand, 16994480 - 16994616
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| ||||||    
T  16994480 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttg 16994578  T
Q  307 gaatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||||| || ||||||||| ||||||||||    
T  16994579 gaatggttaagttaaaag-cagacttcagaacgttctga 16994616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 209 - 345
Target Start/End: Complemental strand, 45191944 - 45191811
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| ||||||||    
T  45191944 tgaagtcgataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgga 45191846  T
Q  309 atggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||  | | |||||||| ||||||||||    
T  45191845 atggttaagtta--aaatagacttcagaacgttctga 45191811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 209 - 348
Target Start/End: Complemental strand, 4469111 - 4468973
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||  |||||||||| |||||||||| | | |||||||    
T  4469111 tgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaatt-aacctgaaacttaaaagtgattctcaagtagtttacttgga 4469013  T
Q  309 atggttaagttaacagacagacttcataacgttctgaagt 348  Q
    || |||||||||| |  | ||||||| |||||||||||||    
T  4469012 atagttaagttaatattctgacttcagaacgttctgaagt 4468973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 209 - 321
Target Start/End: Original strand, 22671481 - 22671593
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| |||||||    
T  22671481 tgaagtagataaaatagtcacaaggaaggggggctttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgg 22671579  T
Q  308 aatggttaagttaa 321  Q
    ||||||||||||||    
T  22671580 aatggttaagttaa 22671593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 209 - 321
Target Start/End: Original strand, 22678620 - 22678732
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| |||||||    
T  22678620 tgaagtagataaaatagtcacaaggaaggggggctttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgg 22678718  T
Q  308 aatggttaagttaa 321  Q
    ||||||||||||||    
T  22678719 aatggttaagttaa 22678732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 208 - 348
Target Start/End: Original strand, 32935656 - 32935796
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||  |||||||||| |||||||||||| | |||||    
T  32935656 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaacc-tgaaacttaaaagtgattctcaagttgtttacttg 32935754  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||| |  | ||||||| |||||||||||||    
T  32935755 gaatagttaagttaatattctgacttcagaacgttctgaagt 32935796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 3604513 - 3604651
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggg---gggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataactt 305  Q
    |||||||||||||||||| |||||||||||   |||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| |||||    
T  3604513 tgaagtagataaaatagtcacaaggaagggagggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aactt 3604611  T
Q  306 ggaatggttaagttaacagacagac-ttcataacgttctga 345  Q
    |||||||||||||||| || ||||| |||| ||||||||||    
T  3604612 ggaatggttaagttaaaag-cagactttcagaacgttctga 3604651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 209 - 387
Target Start/End: Original strand, 6875856 - 6876031
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    ||||||||||| |||||| ||||||||||||  |||||||||||||||||||||||| |||||||  |||||||| | ||||||||||||| ||||||||    
T  6875856 tgaagtagatataatagttacaaggaagggga-tttgaattgtgaccctttaaaaataaaacatgtaacttaaaaataattctcaagttga-aacttgga 6875953  T
Q  309 atggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgtttat 387  Q
    ||| ||||||||| | |  ||||||| ||| ||||||||||| ||| |||| ||| |||||  || |||||||||||||    
T  6875954 atgattaagttaaga-agtgacttcagaactttctgaagtataagtgtaaaaacagtttaataaagtaaatgtgtttat 6876031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 348
Target Start/End: Complemental strand, 4459488 - 4459348
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||  |||||||||| |||||||||| | | |||||    
T  4459488 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaacc-tgaaacttaaaagtgattctcaagtagtttacttg 4459390  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||| |  | ||||||| |||||||||||||    
T  4459389 gaatagttaagttaatattctgacttcagaacgttctgaagt 4459348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 348
Target Start/End: Original strand, 5345583 - 5345723
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||  |||||||||| |||||||||| | | |||||    
T  5345583 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaatt-aacctgaaacttaaaagtgattctcaagtagtttacttg 5345681  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||| |  | ||||||| |||||||||||||    
T  5345682 gaatagttaagttaatattctgacttcagaacgttctgaagt 5345723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 209 - 348
Target Start/End: Original strand, 5335732 - 5335871
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||  |||||||||| |||||||||| | | ||||||    
T  5335732 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaatt-aacctgaaacttaaaagtgattctcaagtagtttacttgg 5335830  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||| |  | ||||||| |||||||||||||    
T  5335831 aatagttaagttaatattctgacttcagaacgttctgaagt 5335871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 24695454 - 24695568
Alignment:
Q  207 gttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  | ||  |||||||||| |||||||||| | | |||||    
T  24695454 gttgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattattc-tgaaacttaaaagtgattctcaagtagtttacttg 24695552  T
Q  307 gaatggttaagttaac 322  Q
    |||| |||||||||||    
T  24695553 gaatagttaagttaac 24695568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 209 - 348
Target Start/End: Complemental strand, 29424461 - 29424324
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | |||||||    
T  29424461 tgaagtagataaaatagtcacaaggaaggggg-tttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtaattctcaagttgtttacttgga 29424364  T
Q  309 atggttaagttaacagacagacttcataacgttctgaagt 348  Q
    || |||||||||||   | ||||||| |||||||||||||    
T  29424363 atagttaagttaactttctgacttcagaacgttctgaagt 29424324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 207 - 297
Target Start/End: Complemental strand, 574789 - 574699
Alignment:
Q  207 gttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagtt 297  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| | |||||||||||    
T  574789 gttgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagtt 574699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 208 - 348
Target Start/End: Original strand, 37861985 - 37862124
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  | ||  ||||||| || |||||||||||| | |||||     
T  37861985 ttgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaatgtaattctcaagttgtttacttga 37862083  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| ||| |||||||   | ||||||| |||||||||||||    
T  37862084 aatagttgagttaactttctgacttcagaacgttctgaagt 37862124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 212 - 345
Target Start/End: Complemental strand, 12580422 - 12580292
Alignment:
Q  212 agtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttggaat 310  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| | ||||  |||| |||||| ||||||||||| | ||||||||||    
T  12580422 agtagataaaatagtcacaaggaaggggg-tttgaattgtgaccctttaaaaatt-atcatgtaacttaaaaagtaattctcaagttca-aacttggaat 12580326  T
Q  311 ggttaagttaacagacagacttcataacgttctga 345  Q
    |||||||||||  ||||||||||| ||||||||||    
T  12580325 ggttaagttaa-tgacagacttcagaacgttctga 12580292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 206 - 348
Target Start/End: Original strand, 38956717 - 38956859
Alignment:
Q  206 ggttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataact 304  Q
    ||||||||||||||||||||| ||||||||| |  |||||||||||||||||||||||| |||  | ||  |||||||||| |||||||||||| | |||    
T  38956717 ggttgaagtagataaaatagtcacaaggaagagaaggtttgaattgtgaccctttaaaatttatcc-tgaaacttaaaagtgattctcaagttgtttact 38956815  T
Q  305 tggaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||||| |||||||||||   | ||||||| |||||||||||||    
T  38956816 tggaattgttaagttaactttctgacttcagaacgttctgaagt 38956859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 44637522 - 44637701
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaa----ggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataac 303  Q
    ||||||||||||||||||| ||||||||    |  ||||||||||||| |||||||||||||||||| |   |||||||| | ||||||||||||| | |    
T  44637522 ttgaagtagataaaatagtcacaaggaattaagtcgggtttgaattgtcaccctttaaaaattaaacttataacttaaaattgattctcaagttga-agc 44637620  T
Q  304 ttggaatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    |||||||||||||||||| || ||||||||| |||||||||| || | |||  ||| ||| |||||  || |||||||||||    
T  44637621 ttggaatggttaagttaaaag-cagacttcagaacgttctgatgtttgagtgcaaaaacagtttaataaagtaaatgtgttt 44637701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 18652325 - 18652223
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | |||||    
T  18652325 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttg 18652227  T
Q  307 gaat 310  Q
    ||||    
T  18652226 gaat 18652223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 18664442 - 18664341
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | ||||||    
T  18664442 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttgg 18664344  T
Q  308 aat 310  Q
    |||    
T  18664343 aat 18664341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 9501632 - 9501734
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | |||||    
T  9501632 ttgaagttgataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttg 9501730  T
Q  307 gaat 310  Q
    ||||    
T  9501731 gaat 9501734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 9512998 - 9513100
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | |||||    
T  9512998 ttgaagttgataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttg 9513096  T
Q  307 gaat 310  Q
    ||||    
T  9513097 gaat 9513100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 29115226 - 29115328
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |||||    
T  29115226 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttg 29115324  T
Q  307 gaat 310  Q
    ||||    
T  29115325 gaat 29115328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 221 - 354
Target Start/End: Original strand, 69055 - 69187
Alignment:
Q  221 aatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttggaatggttaagtta 320  Q
    |||||| ||||||||||||  |||||||||| ||| ||| |||||||||| ||  |||||||| | ||||||||||||  || |||||||||||||||||    
T  69055 aatagttacaaggaaggggtttttgaattgt-accattttaaaattaaacttgtaacttaaaattgattctcaagttgtaaatttggaatggttaagtta 69153  T
Q  321 acagacagacttcataacgttctgaagtattagt 354  Q
      |||| ||||||| ||| || |||||| |||||    
T  69154 cgagactgacttcaaaactttttgaagtgttagt 69187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 2997567 - 2997624
Alignment:
Q  206 ggttgaagtagataaaatagtaacaaggaa-ggggggtttgaattgtgaccctttaaa 262  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  2997567 ggttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaa 2997624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 17489799 - 17489694
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg----tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataact 304  Q
    |||||||||||||||||| ||||||||||||||    |||||||||||||||||| |||| ||| | ||  |||||||| | |||||||||||| | |||    
T  17489799 tgaagtagataaaatagtcacaaggaaggggggggggtttgaattgtgacccttttaaaaataatcctgaaacttaaaaatgattctcaagttgtttact 17489700  T
Q  305 tggaat 310  Q
    ||||||    
T  17489699 tggaat 17489694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 41025763 - 41025823
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaa 268  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||| |||||||||||||||||    
T  41025763 ttgaagtagataaaatagttacaaggaagggaggtttgagttgggaccctttaaaaattaa 41025823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 359
Target Start/End: Original strand, 40407960 - 40408037
Alignment:
Q  280 aaaagttattctcaagttgataacttggaatggttaagttaacagacagacttcataacgttctgaagtattagtataaa 359  Q
    |||||| ||||||||||||| ||||||||||| ||||||||| | |||||||||| || |||||||||| ||||| ||||    
T  40407960 aaaagtaattctcaagttga-aacttggaatgattaagttaa-aaacagacttcagaaagttctgaagtgttagtgtaaa 40408037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 365
Target Start/End: Complemental strand, 22146882 - 22146730
Alignment:
Q  211 aagtagataaaatagtaacaaggaaggggggtttgaattgtgacccttt--aaaaattaaacatgccacttaaa-agttattctcaagttgataacttgg 307  Q
    ||||||||| |||||| | ||| ||  ||||||||||||||||||||||  |||| |||| ||| | ||||||| | | ||||||||||||| |||||||    
T  22146882 aagtagatataatagtcataagaaataggggtttgaattgtgaccctttttaaaatttaatcat-ctacttaaagaatgattctcaagttga-aacttgg 22146785  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaat 365  Q
    |||||| |||||||   || ||||||| || ||||| |||| ||||| |||| |||||    
T  22146784 aatggtcaagttaa---actgacttcagaaagttctaaagtgttagtgtaaaaacaat 22146730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 38929445 - 38929517
Alignment:
Q  276 acttaaaagttattctcaagttgataacttggaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||||||||| |||||||||||| | ||||| ||| |||||||||||   | ||||||| |||||||||||||    
T  38929445 acttaaaagtgattctcaagttgtttacttgaaatagttaagttaactttctgacttcagaacgttctgaagt 38929517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 266
Target Start/End: Complemental strand, 22633070 - 22633032
Alignment:
Q  228 acaaggaaggggggtttgaattgtgaccctttaaaaatt 266  Q
    ||||| |||||||||||||||||||||||||| ||||||    
T  22633070 acaagaaaggggggtttgaattgtgacccttttaaaatt 22633032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 28451364 - 28451261
Alignment:
Q  280 aaaagttattctcaagttgataacttggaatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaat 379  Q
    |||||| ||||||||||||| || |||||||||||||||||| | | | |||||| |||||||||| || | |||  ||| |||||||||  || |||||    
T  28451364 aaaagtaattctcaagttga-aatttggaatggttaagttaata-ataaacttcagaacgttctgatgtctgagtgcaaaaacaatttaacaaagtaaat 28451267  T
Q  380 gtgttt 385  Q
    ||||||    
T  28451266 gtgttt 28451261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 207 - 385
Target Start/End: Complemental strand, 20080 - 19901
Alignment:
Q  207 gttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataactt 305  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  20080 gttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaatcctgccacttaaaagttattctcaagttgataactt 19981  T
Q  306 ggaatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19980 ggaatggttaagttaacagacagacttcagaacgttctgaagtattagtataaacacaatttgaataattaaatgtgttt 19901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 150; Significance: 4e-79; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 209 - 385
Target Start/End: Original strand, 1973636 - 1973813
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1973636 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaacctgccacttaaaagttattctcaagttgataacttgg 1973735  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  1973736 aatggttaagttaacagacagacttcagaacgttctgaagtattagtataaacacaatttgaatgattaaatgtgttt 1973813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 1988422 - 1988600
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1988422 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaacctgccacttaaaagttattctcaagttgataacttg 1988521  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  1988522 aaatggttaagttaacagacagacttcagaacgttctgaagtattagtataaacacaatttgaatgattaaatgtgttt 1988600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 52948650 - 52948826
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| ||||| |    
T  52948650 ttgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaa-ttaaacctgtcacttaaaagttattctcaagttgaaaactttg 52948748  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  52948749 aatggttaagttaacagacagacttcagaacgttctgaagtgttagtataaaaacaatttaaataattaaatgtgttt 52948826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 211 - 345
Target Start/End: Original strand, 41542784 - 41542916
Alignment:
Q  211 aagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttggaat 310  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| | ||||||||||||| ||||||||||    
T  41542784 aagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgtaacttaaaattgattctcaagttga-aacttggaat 41542882  T
Q  311 ggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||| || ||||||||||||||||||||    
T  41542883 ggttaagttaaaag-cagacttcataacgttctga 41542916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 209 - 345
Target Start/End: Complemental strand, 22401605 - 22401472
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| ||||||||    
T  22401605 tgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgga 22401507  T
Q  309 atggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||  | |||||||||| ||||||||||    
T  22401506 atggttaagtta--aaacagacttcagaacgttctga 22401472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 208 - 345
Target Start/End: Complemental strand, 12420517 - 12420383
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| || ||||    
T  12420517 ttgaaatagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aatttgg 12420419  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||||||||||  | |||||||||| ||||||||||    
T  12420418 aatggttaagtta--aaacagacttcagaacgttctga 12420383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 209 - 342
Target Start/End: Complemental strand, 20315540 - 20315408
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| |||||||    
T  20315540 tgaagtagataaaatagtcacaaggaaggggggctttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgg 20315442  T
Q  308 aatggttaagttaacagacagacttcataacgttc 342  Q
    |||||||||||||| | |||||||||| |||||||    
T  20315441 aatggttaagttaa-aaacagacttcagaacgttc 20315408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 208 - 345
Target Start/End: Complemental strand, 27067190 - 27067054
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| ||||||    
T  27067190 ttgaagtagataaaatagtcacaaggaaggggaggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttg 27067092  T
Q  307 gaatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||| |||||||||||| ||||||||| ||| ||||||    
T  27067091 gaatgattaagttaacag-cagacttcagaacattctga 27067054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 20316644 - 20316778
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||| ||  |||||||| | ||||||||||||| ||||||||    
T  20316644 tgaagtagataaaacagtcacaaggaaggggggtttgaattgtgaccttttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgga 20316742  T
Q  309 atggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||| | | |||||||| ||||||||||    
T  20316743 atggttaagttaa-aaatagacttcagaacgttctga 20316778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 209 - 345
Target Start/End: Complemental strand, 25868455 - 25868320
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| ||||| |    
T  25868455 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttag 25868357  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    ||| |||||||||| || ||||||||| ||||||||||    
T  25868356 aattgttaagttaaaag-cagacttcagaacgttctga 25868320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 19735520 - 19735628
Alignment:
Q  212 agtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttggaatg 311  Q
    ||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||   |||||||| | ||||||||||||| |||||||||||    
T  19735520 agtagataaaatagtcacaaggaaggggggtttgaattgtgacattttaaaaattaaacatataacttaaaattgattctcaagttga-aacttggaatg 19735618  T
Q  312 gttaagttaa 321  Q
    ||||||||||    
T  19735619 gttaagttaa 19735628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 20327121 - 20327300
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaa----ggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataac 303  Q
    ||||||||||||||| ||| ||||||||    |||||||||||||||||||| |||||||||||||| ||  |||||||| | ||||||||||||| |||    
T  20327121 ttgaagtagataaaacagtcacaaggaaagggggggggtttgaattgtgaccttttaaaaattaaacctgtaacttaaaattgattctcaagttga-aac 20327219  T
Q  304 ttggaatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    |||||||||||||||||| | | | |||||| |||||||||| || | |||  ||| |||||||||  || |||||||||||    
T  20327220 ttggaatggttaagttaa-aaagaaacttcagaacgttctgatgtctgagtgcaaaaacaatttaataaagtaaatgtgttt 20327300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 348
Target Start/End: Original strand, 21904280 - 21904419
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaag-gggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||  | ||  |||||||||| |||||||||| | | ||||||    
T  21904280 tgaagtagataaaatagtcacaaggaagagggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagtagtttacttgg 21904378  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||||   | ||||||| |||||||||||||    
T  21904379 aatagttaagttaactttctgacttcagaacgttctgaagt 21904419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 209 - 348
Target Start/End: Complemental strand, 8541307 - 8541169
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||| | ||||  |||||||||| |||||||||| | | |||||||    
T  8541307 tgaagtagataaaatagtcacaaggaatggggatttgaattgtgaccctttaaaaatt-atcatgaaacttaaaagtgattctcaagtagtttacttgga 8541209  T
Q  309 atggttaagttaacagacagacttcataacgttctgaagt 348  Q
    || |||||||||| |  | ||||||| || ||||||||||    
T  8541208 attgttaagttaatattctgacttcagaatgttctgaagt 8541169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 209 - 348
Target Start/End: Complemental strand, 8606546 - 8606408
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||| | ||||  |||||||||| |||||||||| | | |||||||    
T  8606546 tgaagtagataaaatagtcacaaggaatggggatttgaattgtgaccctttaaaaatt-atcatgaaacttaaaagtgattctcaagtagtttacttgga 8606448  T
Q  309 atggttaagttaacagacagacttcataacgttctgaagt 348  Q
    || |||||||||| |  | ||||||| || ||||||||||    
T  8606447 attgttaagttaatattctgacttcagaatgttctgaagt 8606408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 208 - 348
Target Start/End: Complemental strand, 2117964 - 2117824
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggg-gggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||  | ||  |||||||||| |||||||||| | | |||||    
T  2117964 ttgaagtagataaaatagtcacaaggaagggagggtttgaattgtgaccctttaaaatttatcc-tgaaacttaaaagtgattctcaagtagtttacttg 2117866  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||||   | ||||||| |||||||||||||    
T  2117865 gaatagttaagttaactttctgacttcagaacgttctgaagt 2117824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 208 - 348
Target Start/End: Complemental strand, 42035325 - 42035186
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| | ||||||| ||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | ||||||    
T  42035325 ttgaagtagataaaatagtcataaggaagagggatttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttgg 42035227  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||||     ||||||| |||||||||||||    
T  42035226 aatagttaagttaactttatgacttcacaacgttctgaagt 42035186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 208 - 345
Target Start/End: Original strand, 18095872 - 18096006
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||| | | ||  |||| |||||| ||||||||| ||| ||||||    
T  18095872 ttgaagtagataaaatattcacaaggaaggagggtttgaattgtgaccctttaaaaatt-atcttgtaacttaaaaagtaattctcaag-tga-aacttg 18095968  T
Q  307 gaatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||||| | |||||||||| ||||||||||    
T  18095969 gaatggttaagttaata-acagacttcaaaacgttctga 18096006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 26192209 - 26192271
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaaca 271  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26192209 tgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattaaaca 26192271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 25038347 - 25038481
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttgg 307  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||| ||  |||| |||||| ||||||||||||| || || |    
T  25038347 tgaaatagataaaatagtcacaaggaaggggagtttgaattgtgaccctttaaaaatt-aacctgtaacttaaaaagtaattctcaagttga-aatttag 25038444  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    |||| ||||||||| | |||| ||||| ||||||||||    
T  25038445 aatgattaagttaata-acaggcttcagaacgttctga 25038481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 25043559 - 25043693
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttgg 307  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||| ||  |||| |||||| ||||||||||||| || || |    
T  25043559 tgaaatagataaaatagtcacaaggaaggggagtttgaattgtgaccctttaaaaatt-aacctgtaacttaaaaagtaattctcaagttga-aatttag 25043656  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    |||| ||||||||| | |||| ||||| ||||||||||    
T  25043657 aatgattaagttaata-acaggcttcagaacgttctga 25043693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 208 - 343
Target Start/End: Complemental strand, 22962012 - 22961879
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttg 306  Q
    |||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||   | ||  |||| |||||  ||||||||||||| ||||||    
T  22962012 ttgaagtaaataaaatagtcacaaggagggggggtttgaattgtgaccctttaaaaatt-gtcttgtaacttaaaaagcaattctcaagttga-aacttg 22961915  T
Q  307 gaatggttaagttaacagacagacttcataacgttct 343  Q
    ||||||||||||||| | ||| |||||| ||||||||    
T  22961914 gaatggttaagttaata-acaaacttcagaacgttct 22961879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 320
Target Start/End: Original strand, 2369376 - 2369485
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | |||| ||    
T  2369376 tgaagtagataaaatagtcacaaagaaggggg-tttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttactttga 2369473  T
Q  309 atggttaagtta 320  Q
    || |||||||||    
T  2369474 atagttaagtta 2369485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 16155990 - 16155888
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |||||    
T  16155990 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttg 16155892  T
Q  307 gaat 310  Q
    ||||    
T  16155891 gaat 16155888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 296
Target Start/End: Complemental strand, 49336867 - 49336782
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagt 296  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||| ||| |||||||| | ||||||||||    
T  49336867 tgaagtagataaaatagtcacaagga-ggggggtttgaattgtgaccctttaaaaatt-aacctgcaacttaaaattaattctcaagt 49336782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 21459734 - 21459633
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | ||||||    
T  21459734 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttgg 21459636  T
Q  308 aat 310  Q
    |||    
T  21459635 aat 21459633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 41200941 - 41200880
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaa 268  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  41200941 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaa 41200880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 208 - 267
Target Start/End: Complemental strand, 25020575 - 25020515
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaatta 267  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  25020575 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaatta 25020515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 209 - 348
Target Start/End: Original strand, 30548577 - 30548715
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaa-ggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||| | | ||  |||||| ||| |||||||||| ||| ||||||    
T  30548577 tgaagtagataaaatagtcacaaggaatggggggtttgaattgtgacccttt-aaaatttatcctgaaacttaagagtgattctcaagtagattacttgg 30548675  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| ||| |||||||   | ||||||| |||||| ||||||    
T  30548676 aatagtt-agttaactttctgacttcagaacgttatgaagt 30548715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 21820403 - 21820460
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaat 265  Q
    |||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  21820403 ttgaagtaaataaaatagtcacaagaaaggggggtttgaattgtgaccctttaaaaat 21820460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 320
Target Start/End: Complemental strand, 34824077 - 34823966
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||| | |||| ||||||||||||| |||||||| ||||  ||||||||| |||| ||  |||||||| | |||||||||||| |||||| |    
T  34824077 ttgaagtagatacattagtcacaaggaaggggg-tttgaattatgacattttaaaaataaaacctgtaacttaaaattgattctcaagttgttaacttag 34823979  T
Q  308 aatggttaagtta 320  Q
    ||| |||||||||    
T  34823978 aatagttaagtta 34823966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 25822287 - 25822346
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaa 268  Q
    |||||||||||||||||| |||||||||  ||| ||||||||||||||||||||||||||    
T  25822287 tgaagtagataaaatagtcacaaggaagttgggcttgaattgtgaccctttaaaaattaa 25822346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 209 - 365
Target Start/End: Complemental strand, 34000975 - 34000819
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggttt-gaattgtgaccc-tttaaaaattaaacatgccactt-aaaagttattctcaagttgataactt 305  Q
    ||||||||||| |||||| |||||||| | | |||| |||||||||||| ||||||| |||| ||||  |||| |||||| ||||||||||||| |||||    
T  34000975 tgaagtagatataatagtcacaaggaatgagagttttgaattgtgacccttttaaaatttaatcatg-tacttaaaaagtaattctcaagttga-aactt 34000878  T
Q  306 ggaatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaat 365  Q
    ||||  |||||||||| | |||||||||| || |||||||||| |||||| ||| |||||    
T  34000877 ggaaaagttaagttaa-aaacagacttcagaaagttctgaagtgttagtacaaaaacaat 34000819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 348
Target Start/End: Complemental strand, 18384425 - 18384314
Alignment:
Q  236 ggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttggaatggttaagttaacagacagacttcat 335  Q
    |||| |||||||||||||||||||||||||||  | ||  |||||||||| |||||||||| | | ||||| |||||||||||||| |  | |||||||     
T  18384425 ggggtgtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagtagtttacttgaaatggttaagttaatattctgacttcag 18384327  T
Q  336 aacgttctgaagt 348  Q
    ||| |||||||||    
T  18384326 aacattctgaagt 18384314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 208 - 321
Target Start/End: Complemental strand, 37013461 - 37013350
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggg-gtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| ||||||||  | | |||||||||||||||||||||||||||    ||  | |||||||| |||||||||| | | |||||    
T  37013461 ttgaagtagataaaatagtcacaaggaatagagagtttgaattgtgaccctttaaaaatta---ctgaaatttaaaagtgattctcaagtagtttacttg 37013365  T
Q  307 gaatggttaagttaa 321  Q
    |||| ||||||||||    
T  37013364 gaatagttaagttaa 37013350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 345
Target Start/End: Complemental strand, 4951525 - 4951393
Alignment:
Q  212 agtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaa-gttattctcaagttgataacttggaa 309  Q
    ||||||||||||||| | |||||||||||| ||| |||||||||||||||||||     | ||  |||||||| || ||||||||||||| ||||| |||    
T  4951525 agtagataaaatagtcataaggaagggggggtttaaattgtgaccctttaaaaaaatttc-tgtaacttaaaaagtaattctcaagttga-aactttgaa 4951428  T
Q  310 tggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||  ||||||||||| ||||||||||    
T  4951427 tggttaagttaat-gacagacttcagaacgttctga 4951393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 13966159 - 13966104
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaag-gggggtttgaattgtgaccctttaaaa 263  Q
    |||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  13966159 tgaagtagataaaatagtcacaagaaagagggggtttgaattgtgaccctttaaaa 13966104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 3470426 - 3470461
Alignment:
Q  228 acaaggaaggggggtttgaattgtgaccctttaaaa 263  Q
    ||||| ||||||||||||||||||||||||||||||    
T  3470426 acaagaaaggggggtttgaattgtgaccctttaaaa 3470461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 259
Target Start/End: Complemental strand, 22893278 - 22893225
Alignment:
Q  206 ggttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgacccttt 259  Q
    |||| ||||||||| |||||| | ||| || |||||||||||||||||||||||    
T  22893278 ggttaaagtagatataatagtcataagaaatgggggtttgaattgtgacccttt 22893225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 25882629 - 25882593
Alignment:
Q  228 acaaggaaggggggtttgaattgtgaccctttaaaaa 264  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  25882629 acaagaaaggggggtttgaattgtgacccttttaaaa 25882593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313 (Bit Score: 147; Significance: 2e-77; HSPs: 2)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 208 - 385
Target Start/End: Complemental strand, 6876 - 6698
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  6876 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaatcctgccacttaaaagttattctcaagttgataacttg 6777  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6776 gaatggttaagttaacagacaaacttcagaacgttctgaagtattagtataaacacaatttgaataattaaatgtgttt 6698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 208 - 385
Target Start/End: Complemental strand, 10658 - 10480
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  10658 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaatcctgccacttaaaagttattctcaagttgataacttg 10559  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10558 gaatggttaagttaacagacaaacttcagaacgttctgaagtattagtataaacacaatttgaataattaaatgtgttt 10480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 147; Significance: 2e-77; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 208 - 385
Target Start/End: Complemental strand, 34766464 - 34766286
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  34766464 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaatcctgccacttaaaagttattctcaagttgataacttg 34766365  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34766364 gaatggttaagttaacagacaaacttcagaacgttctgaagtattagtataaacacaatttgaataattaaatgtgttt 34766286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 208 - 385
Target Start/End: Complemental strand, 18336022 - 18335846
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||| |||||||| |||||||| | || |||||||||||| |||||||||||||||| || |||| |||| ||||||||||||||| |||||||    
T  18336022 ttgaagtagaaaaaatagtcacaaggaatgagg-tttgaattgtgatcctttaaaaattaaacctgtcactgaaaatttattctcaagttgaaaacttgg 18335924  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    |||  ||||||||||||||| |||||| ||||||||||| | |||||||||| |||||||||||||||||||||||||    
T  18335923 aataattaagttaacagacaaacttcagaacgttctgaaatgttagtataaaaacaatttaaataattaaatgtgttt 18335846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 242 - 385
Target Start/End: Original strand, 8562287 - 8562430
Alignment:
Q  242 tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttggaatggttaagttaacagacagacttcataacgtt 341  Q
    ||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| ||| ||    
T  8562287 tttgaattgtgactctttaaaaattaaacctgtcacttaaaagttattctcaagttgaaaacttggagtggttaagttaacaaacagacttcaaaacatt 8562386  T
Q  342 ctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||||||| |||||||||| ||| |||||||||||||||||||||    
T  8562387 ctgaagtgttagtataaaaacagtttaaataattaaatgtgttt 8562430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 208 - 385
Target Start/End: Complemental strand, 19364179 - 19364002
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||| ||    ||||||   ||| ||||||||  |||||||    
T  19364179 ttgaagtagataaaatagtcataaggaaggggagtttgaattgtgaccctttaaaaattaaacttgtactttaaaatcaattttcaagttgtaaacttgg 19364080  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||| |||| ||| ||||||||| |||||||||||    
T  19364079 aatggttaagttattagacagacttcataacgttctgaagtgttagtgtaaaaacagtttaaataaataaatgtgttt 19364002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 208 - 345
Target Start/End: Original strand, 26019360 - 26019497
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| ||||||    
T  26019360 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttg 26019458  T
Q  307 gaatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||||| |  ||||||||| ||||||||||    
T  26019459 gaatggttaagttaaaaagcagacttcagaacgttctga 26019497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 30656832 - 30657007
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| |||||||    
T  30656832 ttgaagtagataaaatagtcacaaggaaggggagtttgaattgtgaccctttaaaaattaaacttgtaacttaaaattgattctcaagttga-aacttgg 30656930  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||| |||||||||| || ||||||||| |||||||||| || | |||  ||| | |||||||  || |||||||||||    
T  30656931 aatagttaagttaaaag-cagacttcagaacgttctgatgtctgagtgcaaaaaaaatttaataaaataaatgtgttt 30657007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 7753677 - 7753811
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| ||||||||    
T  7753677 tgaagtagataaaatagtcacaaggaatgggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgga 7753775  T
Q  309 atggttaagttaacagacagacttcataacgttctga 345  Q
    || |||||||||| || ||||||||| ||||||||||    
T  7753776 attgttaagttaaaag-cagacttcagaacgttctga 7753811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 208 - 345
Target Start/End: Original strand, 24502530 - 24502667
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaa-ggggggtttgaattgtgacccttt-aaaaattaaacatgccacttaaaagttattctcaagttgataactt 305  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||| ||  |||||||| | ||||||||||||| |||||    
T  24502530 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaaattaaacctgtaacttaaaattgattctcaagttga-aactt 24502628  T
Q  306 ggaatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||||||||||||| || ||||||||| ||||||||||    
T  24502629 ggaatggttaagttaaaag-cagacttcagaacgttctga 24502667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 209 - 345
Target Start/End: Complemental strand, 1598266 - 1598132
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| |||||||    
T  1598266 tgaagtagataaaatagtcagaaggaagggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgg 1598168  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||||||||||  | |||||||||| ||||||||||    
T  1598167 aatggttaagtta--aaacagacttcagaacgttctga 1598132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 12988812 - 12988946
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| |||||||    
T  12988812 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaacctgtgacttaaaattgattctcaagttga-aacttgg 12988910  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||||||||||  | |||||||||| || |||||||    
T  12988911 aatggttaagtta--aaacagacttcagaatgttctga 12988946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 208 - 345
Target Start/End: Original strand, 18705277 - 18705412
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | | ||  |||| |||||| ||||||||||||| ||||||    
T  18705277 ttgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaatt-atcctgtaacttaaaaagtaattctcaagttga-aacttg 18705374  T
Q  307 gaatggttaagttaacagacagacttcataacgttctga 345  Q
    |||| ||||||||||  ||||||||||| ||||||||||    
T  18705375 gaatagttaagttaa-tgacagacttcagaacgttctga 18705412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 208 - 345
Target Start/End: Original strand, 18711212 - 18711347
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | | ||  |||| |||||| ||||||||||||| ||||||    
T  18711212 ttgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaatt-atcctgtaacttaaaaagtaattctcaagttga-aacttg 18711309  T
Q  307 gaatggttaagttaacagacagacttcataacgttctga 345  Q
    |||| ||||||||||  ||||||||||| ||||||||||    
T  18711310 gaatagttaagttaa-tgacagacttcagaacgttctga 18711347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 209 - 345
Target Start/End: Complemental strand, 16322430 - 16322296
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttgg 307  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| | | ||  |||| |||||| ||||||||||||| |||||||    
T  16322430 tgaagtaaataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaatt-atcctgtaacttaaaaagtaattctcaagttga-aacttgg 16322333  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||||||||||| | |||||||||| ||||||||||    
T  16322332 aatggttaagttaata-acagacttcagaacgttctga 16322296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 209 - 345
Target Start/End: Complemental strand, 16334578 - 16334444
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttgg 307  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| | | ||  |||| |||||| ||||||||||||| |||||||    
T  16334578 tgaagtaaataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaatt-atcctgtaacttaaaaagtaattctcaagttga-aacttgg 16334481  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||||||||||| | |||||||||| ||||||||||    
T  16334480 aatggttaagttaata-acagacttcagaacgttctga 16334444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 209 - 348
Target Start/End: Complemental strand, 18202656 - 18202517
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||| ||  | |||||||| |||||||||| | | ||||||    
T  18202656 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaatt-aacctgaaatttaaaagtgattctcaagtagtttacttgg 18202558  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||| |  | ||||||| |||||||| ||||    
T  18202557 aatagttaagttaatatcctgacttcagaacgttctaaagt 18202517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 208 - 348
Target Start/End: Complemental strand, 20968952 - 20968812
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaa-ggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| | |||||| |||||||||||||||||||||||||||| |||  | ||  |||||||||| |||||||||| | | |||||    
T  20968952 ttgaagtagataaaatagtcataaggaatggggggtttgaattgtgaccctttaaaatttatcc-tgaaacttaaaagtgattctcaagtagtttacttg 20968854  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||||   | ||||||| |||||||||||||    
T  20968853 gaatagttaagttaactttctgacttcagaacgttctgaagt 20968812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 206 - 385
Target Start/End: Complemental strand, 28093738 - 28093555
Alignment:
Q  206 ggttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataactt 305  Q
    ||||||| |||||| || ||| | |||||||  ||||||||||||||| ||||| |||||||||| ||  |||||||| | ||||||||||||  |||||    
T  28093738 ggttgaattagatataacagtcataaggaagaagggtttgaattgtgatccttttaaaattaaacttgtaacttaaaattgattctcaagttgtaaactt 28093639  T
Q  306 ggaatggttaagtt----aacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||||| ||||||||    || | || ||||||||||||||||||||| |||||  ||  | | ||||||||| |||||||||||    
T  28093638 ggaatagttaagttaaaaaaaaaactgacttcataacgttctgaagtgttagtgcaataatagtttaaataagtaaatgtgttt 28093555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 789963 - 790022
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaa 268  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  789963 tgaagtagataaaatagtcacaaggaaggggggtttgaattgtgatcctttaaaaattaa 790022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 16899053 - 16898951
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |||||    
T  16899053 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttg 16898955  T
Q  307 gaat 310  Q
    ||||    
T  16898954 gaat 16898951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 16909706 - 16909604
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |||||    
T  16909706 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttg 16909608  T
Q  307 gaat 310  Q
    ||||    
T  16909607 gaat 16909604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 31358668 - 31358566
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |||||    
T  31358668 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttg 31358570  T
Q  307 gaat 310  Q
    ||||    
T  31358569 gaat 31358566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 31368398 - 31368296
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |||||    
T  31368398 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttg 31368300  T
Q  307 gaat 310  Q
    ||||    
T  31368299 gaat 31368296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 3286952 - 3286851
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | ||||||    
T  3286952 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttgg 3286854  T
Q  308 aat 310  Q
    |||    
T  3286853 aat 3286851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 14792708 - 14792607
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggg-gtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | ||||||    
T  14792708 tgaagtagataaaatagtcacaaggaagggggagtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttgg 14792610  T
Q  308 aat 310  Q
    |||    
T  14792609 aat 14792607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 20913388 - 20913287
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | ||||||    
T  20913388 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttgg 20913290  T
Q  308 aat 310  Q
    |||    
T  20913289 aat 20913287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 12456162 - 12456058
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg----tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataact 304  Q
    |||||||||||||||||| ||||||||||||||    ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | |||    
T  12456162 tgaagtagataaaatagtcacaaggaaggggggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttact 12456064  T
Q  305 tggaat 310  Q
    ||||||    
T  12456063 tggaat 12456058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 18170981 - 18170878
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg---tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataactt 305  Q
    |||||||||||||||||| ||||||||||||||   ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | ||||    
T  18170981 tgaagtagataaaatagtcacaaggaagggggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttactt 18170883  T
Q  306 ggaat 310  Q
    |||||    
T  18170882 ggaat 18170878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 24929989 - 24930090
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||  | ||  |||||||| | |||||||||||| | ||||||    
T  24929989 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccttttaaaaattatcc-tgaaacttaaaattgattctcaagttgtttacttgg 24930087  T
Q  308 aat 310  Q
    |||    
T  24930088 aat 24930090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 26439935 - 26439834
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | ||||||    
T  26439935 tgaagtatataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttgg 26439837  T
Q  308 aat 310  Q
    |||    
T  26439836 aat 26439834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 18161172 - 18161066
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-----tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataa 302  Q
    ||||||||||||||||||| ||||||||||||||     ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |    
T  18161172 ttgaagtagataaaatagtcacaaggaagggggggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgttta 18161074  T
Q  303 cttggaat 310  Q
    ||||||||    
T  18161073 cttggaat 18161066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 208 - 348
Target Start/End: Complemental strand, 29541554 - 29541416
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||| || |||||||||| ||||||||||||| |||||||||| || ||||||||||||  | ||  |||||||||| |||||||||||| | ||||      
T  29541554 ttgaattaaataaaatagtcacaaggaaggggg-tttgaattgttactctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttat 29541457  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    | ||||||| |||||   | ||||||| |||||||||||||    
T  29541456 attggttaaattaactttctgacttcagaacgttctgaagt 29541416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 345
Target Start/End: Complemental strand, 26169648 - 26169555
Alignment:
Q  250 gtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttggaatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||||||| | ||||  |||| |||||| ||||||||||||| ||||||||||| ||||||||| | |||||||||| ||||||||||    
T  26169648 gtgaccctttaaaaatt-atcatgtaacttaaaaagtaattctcaagttga-aacttggaatgattaagttaata-acagacttcagaacgttctga 26169555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 345
Target Start/End: Complemental strand, 26169837 - 26169744
Alignment:
Q  250 gtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttggaatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||||||| | ||||  |||| |||||| ||||||||||||| ||||||||||| ||||||||| | |||||||||| ||||||||||    
T  26169837 gtgaccctttaaaaatt-atcatgtaacttaaaaagtaattctcaagttga-aacttggaatgattaagttaata-acagacttcagaacgttctga 26169744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 345
Target Start/End: Complemental strand, 26170026 - 26169933
Alignment:
Q  250 gtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttggaatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||||||| | ||||  |||| |||||| ||||||||||||| ||||||||||| ||||||||| | |||||||||| ||||||||||    
T  26170026 gtgaccctttaaaaatt-atcatgtaacttaaaaagtaattctcaagttga-aacttggaatgattaagttaata-acagacttcagaacgttctga 26169933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 345
Target Start/End: Complemental strand, 26170215 - 26170122
Alignment:
Q  250 gtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttggaatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||||||| | ||||  |||| |||||| ||||||||||||| ||||||||||| ||||||||| | |||||||||| ||||||||||    
T  26170215 gtgaccctttaaaaatt-atcatgtaacttaaaaagtaattctcaagttga-aacttggaatgattaagttaata-acagacttcagaacgttctga 26170122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 345
Target Start/End: Complemental strand, 26170404 - 26170311
Alignment:
Q  250 gtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttggaatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||||||| | ||||  |||| |||||| ||||||||||||| ||||||||||| ||||||||| | |||||||||| ||||||||||    
T  26170404 gtgaccctttaaaaatt-atcatgtaacttaaaaagtaattctcaagttga-aacttggaatgattaagttaata-acagacttcagaacgttctga 26170311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 345
Target Start/End: Complemental strand, 26170593 - 26170500
Alignment:
Q  250 gtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttggaatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||||||| | ||||  |||| |||||| ||||||||||||| ||||||||||| ||||||||| | |||||||||| ||||||||||    
T  26170593 gtgaccctttaaaaatt-atcatgtaacttaaaaagtaattctcaagttga-aacttggaatgattaagttaata-acagacttcagaacgttctga 26170500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 385
Target Start/End: Complemental strand, 26169438 - 26169337
Alignment:
Q  282 aagttattctcaagttgataacttggaatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgt 381  Q
    |||| ||||||||||||| ||||||||||| ||||||||| | |||||||||| |||||||||| || | |||  ||| ||| |||||  || |||||||    
T  26169438 aagtaattctcaagttga-aacttggaatgattaagttaata-acagacttcagaacgttctgatgtctgagtgcaaaaacagtttaacaaagtaaatgt 26169341  T
Q  382 gttt 385  Q
    ||||    
T  26169340 gttt 26169337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 354
Target Start/End: Original strand, 6314508 - 6314584
Alignment:
Q  276 acttaaaagttattctcaagttgataacttggaatggttaagttaacagacagacttcataacgttctgaagtattagt 354  Q
    |||||||| | ||||||||||||| |||||||||| |||||||||| | || ||||||| ||||||| ||||| |||||    
T  6314508 acttaaaattgattctcaagttga-aacttggaattgttaagttaa-atactgacttcagaacgttcagaagtgttagt 6314584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 26512557 - 26512501
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagg--ggggtttgaattgtgaccctttaaaa 263  Q
    ||||||| |||||||||| ||||||| ||  |||| |||||||||||||||||||||    
T  26512557 tgaagtaaataaaatagtcacaaggagggaggggggttgaattgtgaccctttaaaa 26512501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 26517673 - 26517617
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagg--ggggtttgaattgtgaccctttaaaa 263  Q
    ||||||| |||||||||| ||||||| ||  |||| |||||||||||||||||||||    
T  26517673 tgaagtaaataaaatagtcacaaggagggaggggggttgaattgtgaccctttaaaa 26517617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 21356338 - 21356374
Alignment:
Q  228 acaaggaaggggggtttgaattgtgaccctttaaaaa 264  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  21356338 acaagaaaggggggtttgaattgtgacccttttaaaa 21356374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 3e-76; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 209 - 385
Target Start/End: Complemental strand, 14438533 - 14438357
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14438533 tgaagtatataaaatagtcacaaggaaggggggtttgaattgtgaccttttaaaaattaaacctgccacttaaaagttattctcaagttgataacttgga 14438434  T
Q  309 atggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||||||||||| |||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  14438433 atggttaagtttacagacagacttcagaacgttctgaagtgttagtataaaaacaatttaaataattaaatgtgttt 14438357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 209 - 385
Target Start/End: Original strand, 26361283 - 26361467
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggg--------ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgat 300  Q
    |||||||||||||||||| ||||||||||||        ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  26361283 tgaagtagataaaatagtcacaaggaaggggggggggggggtttgaattgtgaccctttaaaaattaaacatgctacttaaaatttattctcaagttgat 26361382  T
Q  301 aacttggaatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    |||||||||||||||| |||||| ||| |||||| || ||||||||||||||||||||||||||||| |||||||||||||||||    
T  26361383 aacttggaatggttaaattaacatacaaacttcagaatgttctgaagtattagtataaacacaatttgaataattaaatgtgttt 26361467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 31998193 - 31998368
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| |||||||    
T  31998193 ttgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgg 31998291  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    |||||||||||||| |  ||||||||| |||||||||| || | |||  ||| ||| |||||  || |||||||||||    
T  31998292 aatggttaagttaaaac-cagacttcagaacgttctgatgtctgagtgcaaaaacagtttaataaagtaaatgtgttt 31998368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 208 - 345
Target Start/End: Complemental strand, 8669054 - 8668919
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| ||||||    
T  8669054 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttg 8668956  T
Q  307 gaatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||||  | |||||||||| ||||||||||    
T  8668955 gaatggttaagtta--aaacagacttcagaacgttctga 8668919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 208 - 345
Target Start/End: Original strand, 14892986 - 14893122
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| ||||||    
T  14892986 ttgaagttgataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttg 14893084  T
Q  307 gaatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||||||||| ||||| ||||||||| || |||||||    
T  14893085 gaatggttaagtcaacag-cagacttcagaatgttctga 14893122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 207 - 348
Target Start/End: Complemental strand, 13675871 - 13675730
Alignment:
Q  207 gttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataactt 305  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||  |||||||||| |||||||||| | | ||||    
T  13675871 gttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaacc-tgaaacttaaaagtgattctcaagtagtttactt 13675773  T
Q  306 ggaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||||| |||||||||| |  | ||||||| |||||||||||||    
T  13675772 ggaatagttaagttaatattctgacttcagaacgttctgaagt 13675730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 348
Target Start/End: Complemental strand, 3988622 - 3988482
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||  |||||||||| |||||||||| | | |||||    
T  3988622 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaacc-tgaaacttaaaagtgattctcaagtagtttacttg 3988524  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||| |  | ||||||| |||||||||||||    
T  3988523 gaatagttaagttaatattctgacttcagaacgttctgaagt 3988482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 348
Target Start/End: Original strand, 21996234 - 21996374
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||  |||||||||| |||||||||| | | |||||    
T  21996234 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaatt-aacctgaaacttaaaagtgattctcaagtagtttacttg 21996332  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||| |  | ||||||| |||||||||||||    
T  21996333 gaatagttaagttaatattctgacttcagaacgttctgaagt 21996374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 236 - 385
Target Start/End: Original strand, 31990632 - 31990779
Alignment:
Q  236 ggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttggaatggttaagttaacagacagacttcat 335  Q
    ||||||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| ||||||||||||||||||||| || |||||||||     
T  31990632 ggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttggaatggttaagttaaaag-cagacttcag 31990729  T
Q  336 aacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    |||||||||| || | |||  ||| |||||||||  || |||||||||||    
T  31990730 aacgttctgatgtctgagtgcaaaaacaatttaataaagtaaatgtgttt 31990779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 209 - 348
Target Start/End: Complemental strand, 16583062 - 16582923
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||  |||||||||| |||||||||| | | ||||||    
T  16583062 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaacc-tgaaacttaaaagtgattctcaagtagtttacttgg 16582964  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||| |  | ||||||| |||||||||||||    
T  16582963 aatagttaagttaatattctgacttcagaacgttctgaagt 16582923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 209 - 348
Target Start/End: Original strand, 21986701 - 21986840
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||  |||||||||| |||||||||| | | ||||||    
T  21986701 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaatt-aacctgaaacttaaaagtgattctcaagtagtttacttgg 21986799  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||| |  | ||||||| |||||||||||||    
T  21986800 aatagttaagttaatattctgacttcagaacgttctgaagt 21986840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 208 - 348
Target Start/End: Original strand, 12900259 - 12900399
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||  |||||||||| ||||| |||| | | |||||    
T  12900259 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaatt-aacctgaaacttaaaagtgattctaaagtagtttacttg 12900357  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||| |  | ||||||| |||||||||||||    
T  12900358 gaatagttaagttaatattctgacttcagaacgttctgaagt 12900399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 14880637 - 14880772
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| |||||||    
T  14880637 tgaagttgataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgg 14880735  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||  ||||| ||||| ||||||||| || |||||||    
T  14880736 aatgaataagtcaacag-cagacttcagaatgttctga 14880772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 208 - 348
Target Start/End: Complemental strand, 21462215 - 21462075
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||| | | |||||    
T  21462215 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagtagtttacttg 21462117  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| |||||||||||   | ||||||| |||||||||||||    
T  21462116 gaatagttaagttaactttctgacttcagaacgttctgaagt 21462075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 209 - 345
Target Start/End: Original strand, 23014006 - 23014140
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | | |   |||| |||||| ||||||||||||| |||||||    
T  23014006 tgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaatt-atcctataacttaaaaagtaattctcaagttga-aacttgg 23014103  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||| |||||||  ||||||||||| ||||||||||    
T  23014104 aatggtaaagttaa-tgacagacttcagaacgttctga 23014140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 228 - 345
Target Start/End: Original strand, 20529843 - 20529958
Alignment:
Q  228 acaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttggaatggttaagttaacagaca 327  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| |||||| ||| |||||||||| || ||    
T  20529843 acaaggaaggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgaaatagttaagttaaaag-ca 20529940  T
Q  328 gacttcataacgttctga 345  Q
    ||||||| || |||||||    
T  20529941 gacttcagaaagttctga 20529958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 236 - 345
Target Start/End: Original strand, 33773109 - 33773216
Alignment:
Q  236 ggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttggaatggttaagttaacagacagacttcat 335  Q
    |||||||||||||||||||||||||||||||| || ||  |||||||| | ||||||||||||| ||||||||||||||||||||| || |||||||||     
T  33773109 ggggggtttgaattgtgaccctttaaaaattacacctgtaacttaaaattgattctcaagttga-aacttggaatggttaagttaaaag-cagacttcag 33773206  T
Q  336 aacgttctga 345  Q
    ||||||||||    
T  33773207 aacgttctga 33773216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 21212204 - 21212306
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | |||||    
T  21212204 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttg 21212302  T
Q  307 gaat 310  Q
    ||||    
T  21212303 gaat 21212306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 21335405 - 21335303
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | |||||    
T  21335405 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttg 21335307  T
Q  307 gaat 310  Q
    ||||    
T  21335306 gaat 21335303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 21201789 - 21201890
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | ||||||    
T  21201789 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagttgtttacttgg 21201887  T
Q  308 aat 310  Q
    |||    
T  21201888 aat 21201890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 9323989 - 9324091
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |||||    
T  9323989 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttg 9324087  T
Q  307 gaat 310  Q
    ||||    
T  9324088 gaat 9324091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 320
Target Start/End: Original strand, 11429421 - 11429531
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||| | ||| ||| |||||||| | |||||||||| | | |||||||    
T  11429421 tgaagtagataaaatagtcacaaggaagggg-gtttgaattgtgaccatttaaaaaattaacctgcaacttaaaaataattctcaagtggtttacttgga 11429519  T
Q  309 atggttaagtta 320  Q
    |  |||||||||    
T  11429520 aaagttaagtta 11429531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 18524636 - 18524535
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||  | ||  |||||||| | |||||||||||| | ||||||    
T  18524636 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaacctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttgg 18524538  T
Q  308 aat 310  Q
    |||    
T  18524537 aat 18524535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 6760763 - 6760708
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaa 263  Q
    ||||||| ||||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  6760763 ttgaagtggataaaatagtcacaaggaaggggggtttgaatagtgacccttaaaaa 6760708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 299
Target Start/End: Original strand, 12840409 - 12840502
Alignment:
Q  206 ggttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttga 299  Q
    |||||||||| ||| |||||| | |||||||| ||||||||||| ||||||||| ||| |||| | ||   ||||||| | |||||||||||||    
T  12840409 ggttgaagtatatataatagtcataaggaaggtgggtttgaattatgacccttttaaatttaatcttgtatcttaaaaatgattctcaagttga 12840502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 209 - 385
Target Start/End: Original strand, 39527 - 39703
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    ||||| |||||||||||| |||| |||| ||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||  ||||| ||    
T  39527 tgaagcagataaaatagtcacaacgaagaggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaagttattctcgagttgtaaacttaga 39626  T
Q  309 atggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    |||||||||||||||||||||||||||||||||||||| | ||||| |||| ||| |||||||||||||||||||||    
T  39627 atggttaagttaacagacagacttcataacgttctgaaatgttagtgtaaaaacagtttaaataattaaatgtgttt 39703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 209 - 385
Target Start/End: Original strand, 110728 - 110902
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| | ||| ||||||||| ||||||||    
T  110728 tgaagtagataagatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgtaacttaaaattgattttcaagttga-aacttgga 110826  T
Q  309 atggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||||| ||||||| || ||||||||| |||||||||| || | |||  ||| ||| ||||| ||| |||||||||||    
T  110827 atggtaaagttaaaag-cagacttcagaacgttctgatgtctgagtgcaaaaacagtttaattaagtaaatgtgttt 110902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 209 - 345
Target Start/End: Complemental strand, 9246 - 9111
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| |||||||    
T  9246 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaacttgtaacttaaaattgattctcaagttga-aacttgg 9148  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||||||||||| || ||||||||| ||||||||||    
T  9147 aatggttaagttaaaag-cagacttcagaacgttctga 9111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 208 - 345
Target Start/End: Complemental strand, 231 - 95
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||  |||||||| | ||||||||||||| ||||||    
T  231 ttgaagtggataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttg 133  T
Q  307 gaatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||||| || ||||||||| ||||||||||    
T  132 gaatggttaagttaaaag-cagacttcagaacgttctga 95  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 208 - 345
Target Start/End: Original strand, 394818 - 394953
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||| ||  |||||||| | ||||||||||||| |||||||    
T  394818 ttgaagtagataaaatagtcacaaggaagggaggtttgaattgtgacccttcaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgg 394916  T
Q  308 aatggttaagttaacagacagacttcataacgttctga 345  Q
    |||||||||||||| || || |||||| ||||||||||    
T  394917 aatggttaagttaaaag-caaacttcagaacgttctga 394953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 73; Significance: 3e-33; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 209 - 321
Target Start/End: Original strand, 27973 - 28084
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| | ||||||| ||||| ||||||||    
T  27973 tgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattctcaggttga-aacttgga 28071  T
Q  309 atggttaagttaa 321  Q
    ||| |||||||||    
T  28072 atgattaagttaa 28084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 208 - 321
Target Start/End: Original strand, 49177 - 49288
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||| ||  |||||||| | ||||| ||||||| |||||||    
T  49177 ttgaagtagataaaatagtcacaaggaaggggcatttgaattgtgaccctttaaaaattaaacctgtaacttaaaattgattct-aagttga-aacttgg 49274  T
Q  308 aatggttaagttaa 321  Q
    ||||||||||||||    
T  49275 aatggttaagttaa 49288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 311
Target Start/End: Original strand, 58669 - 58771
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||| ||||||||||| |||||||||||||| |||| |||||||||| ||||||||||||| ||  |||||||| | ||||||||||||| |||||||    
T  58669 tgaagtggataaaatagtcacaaggaagggggggtttggattgtgacccattaaaaattaaacctgtaacttaaaattgattctcaagttga-aacttgg 58767  T
Q  308 aatg 311  Q
    ||||    
T  58768 aatg 58771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0873 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0873
Description:

Target: scaffold0873; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 209 - 348
Target Start/End: Original strand, 4757 - 4895
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  | ||  |||||||||| |||||||||| | | |||||||    
T  4757 tgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagtagtttacttgga 4855  T
Q  309 atggttaagttaacagacagacttcataacgttctgaagt 348  Q
    || |||||||||||   | ||||||| |||||||||||||    
T  4856 atagttaagttaactttctgacttcagaacgttctgaagt 4895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 209 - 348
Target Start/End: Original strand, 73686 - 73824
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||  | ||  |||||||||| |||||||||| ||| |||||||    
T  73686 tgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaatttatcc-tgaaacttaaaagtaattctcaagtagattacttgga 73784  T
Q  309 atggttaagttaacagacagacttcataacgttctgaagt 348  Q
    || |||||||||||   | ||||||| |||||||||||||    
T  73785 atagttaagttaactttctgacttcagaacgttctgaagt 73824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 209 - 348
Target Start/End: Original strand, 30615 - 30754
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||  |||||||||| |||||||||| | | ||||||    
T  30615 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaatt-aacctgaaacttaaaagtgattctcaagtagtttacttgg 30713  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||| |  | ||||||| |||||||||||||    
T  30714 aatagttaagttaatattctgacttcagaacgttctgaagt 30754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 20012 - 20188
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggt-ttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||| ||||||| ||||||||||||||  |||| ||||||||||||||||||||||  ||  |||||||| | ||||||||||||| ||| ||    
T  20012 ttgaagtagatgaaatagtcacaaggaaggggggggttgacttgtgaccctttaaaaattaaagctgtaacttaaaattgattctcaagttga-aacatg 20110  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||||||||||||||| || ||||||||| |||||||| | ||||||||  ||| ||| |||||  || |||||||||||    
T  20111 gaatggttaagttaaaag-cagacttcagaacgttctaatgtattagtgcaaatacagtttaataaagtaaatgtgttt 20188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0591 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0591
Description:

Target: scaffold0591; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 348
Target Start/End: Complemental strand, 323 - 184
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||| ||  |||||||||| ||||| |||| | | ||||||    
T  323 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaatt-aacctgaaacttaaaagtgattcttaagtagtttacttgg 225  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||| |  | ||||||| |||||||||||||    
T  224 aatagttaagttaatattctgacttcagaacgttctgaagt 184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 381
Target Start/End: Complemental strand, 1377 - 1205
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgga 308  Q
    ||||||||||| |||||| ||||||||||||| |||||||||||||||||| |||||||||| | | |||||||| | ||| ||||||||  |||||| |    
T  1377 tgaagtagatataatagtcacaaggaagggggatttgaattgtgacccttttaaaattaaacctacaacttaaaattaattatcaagttgtaaacttgaa 1278  T
Q  309 atggttaagttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgt 381  Q
    |||||||||||||   |  ||||||| ||||||  ||||| ||||| |||  ||| ||||||||| |||||||    
T  1277 atggttaagttaaggaaatgacttcagaacgttaagaagtgttagtgtaataacagtttaaataaataaatgt 1205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 6802 - 6906
Alignment:
Q  208 ttgaagtagataaaa-tagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataactt 305  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||| | ||||    
T  6802 ttgaagtagataaaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaatcctgccacttaaaagtgattctcaagttgtttactt 6901  T
Q  306 ggaat 310  Q
    |||||    
T  6902 ggaat 6906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 208 - 345
Target Start/End: Complemental strand, 19882 - 19746
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttg 306  Q
    |||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| | | | ||  |||| |||||| ||||||||||||| || |||    
T  19882 ttgaagtaaataaaatagtcacaagggaggggggtttgaattgtgaccctttaaaaaattatcctgtaacttaaaaagtaattctcaagttga-aatttg 19784  T
Q  307 gaatggttaagttaacagacagacttcataacgttctga 345  Q
    ||||||||||||||| | |||||||||| ||||||||||    
T  19783 gaatggttaagttaata-acagacttcagaacgttctga 19746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 208 - 348
Target Start/End: Original strand, 915 - 1055
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggg-gtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||  | ||  |||||||||| |||||||||| | | |||||    
T  915 ttgaagtagataaaatagtcacaacgaagggggagtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagtagtttacttg 1013  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    |||| ||||||||||||  |  |||||| |||||||||||||    
T  1014 gaatagttaagttaacattctaacttcagaacgttctgaagt 1055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 207 - 310
Target Start/End: Original strand, 308981 - 309083
Alignment:
Q  207 gttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | |||||    
T  308981 gttgaagtagataaaatagtcacaaggaaggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttg 309079  T
Q  307 gaat 310  Q
    ||||    
T  309080 gaat 309083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 267
Target Start/End: Complemental strand, 217771 - 217711
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaa-ggggggtttgaattgtgaccctttaaaaatta 267  Q
    ||||||||||||| ||||| |||||||| ||||| ||| ||||||||||||||||||||||    
T  217771 ttgaagtagataatatagtcacaaggaatgggggtttttaattgtgaccctttaaaaatta 217711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 208 - 297
Target Start/End: Original strand, 2326 - 2416
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagtt 297  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||| | |||||||||||    
T  2326 ttgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaacttgtaacttaaaattgattctcaagtt 2416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 209 - 348
Target Start/End: Complemental strand, 9220 - 9081
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagg-ggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||  | ||  |||||||||| |||||||||| | | ||||||    
T  9220 tgaagtagataaaatagtcacaaggaaggaggggtttgaattgcgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagtagtttacttgg 9122  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||||   | ||||||| |||||| ||||||    
T  9121 aatagttaagttaactttctgacttcagaacgttatgaagt 9081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 208 - 347
Target Start/End: Complemental strand, 469 - 330
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| ||||| |||||||| |||||||||||||| |||||||||||  | ||  |||||||||| |||||||||| | | |||||    
T  469 ttgaagtagataaaatagtcacaagaaagggggggtttgaattgtgaccatttaaaaattatcc-tgaaacttaaaagtgattctcaagtagtttacttg 371  T
Q  307 gaatggttaagttaacagacagacttcataacgttctgaag 347  Q
    |||| |||||||||||   | ||||||| ||||||||||||    
T  370 gaatagttaagttaactttctgacttcagaacgttctgaag 330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 209 - 348
Target Start/End: Original strand, 91837 - 91976
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||||| ||||||||||   | ||||||    
T  91837 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtgattctcaagtattttacttgg 91935  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||||   | ||| ||| |||||||||||||    
T  91936 aatagttaagttaactttctgacatcagaacgttctgaagt 91976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 208 - 348
Target Start/End: Complemental strand, 147815 - 147677
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    ||||||| ||||||||||| ||||||||| ||| ||||||||||||||||||||||||||  | ||  |||||||||| |||||||||||| | ||||||    
T  147815 ttgaagtggataaaatagtcacaaggaagaggg-tttgaattgtgaccctttaaaaattatcc-tgaaacttaaaagtaattctcaagttgtttacttgg 147718  T
Q  308 aatggttaagttaacagacagacttcataacgttctgaagt 348  Q
    ||| |||||||||||   | ||||| | |||||||||||||    
T  147717 aatagttaagttaactttctgactttagaacgttctgaagt 147677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 232951 - 233052
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | ||||||    
T  232951 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttgg 233049  T
Q  308 aat 310  Q
    |||    
T  233050 aat 233052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 14892 - 14993
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggg-ggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| || ||  |||||||| | |||||||||||| | ||||||    
T  14892 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattatac-tgaaacttaaaaatgattctcaagttgtttacttgg 14990  T
Q  308 aat 310  Q
    |||    
T  14991 aat 14993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2147 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold2147
Description:

Target: scaffold2147; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 71 - 9
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaac 270  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  71 tgaagtagataaaatagtcacaaggaagggggggtttgaattgtgaccctttaaaaattaaac 9  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 208 - 345
Target Start/End: Complemental strand, 8529 - 8396
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccactt-aaaagttattctcaagttgataacttg 306  Q
    ||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||  | | | ||  |||| |||||| |||||||||| || ||||||    
T  8529 ttgaagtagataaaatagtcacaaggaa-ggggatttgaattgtgaccctttaaaa--ttatcctgtaacttaaaaagtgattctcaagtgga-aacttg 8434  T
Q  307 gaatggttaagttaacagacagacttcataacgttctga 345  Q
     |||||||||||||| | |||||||||| ||||||||||    
T  8433 aaatggttaagttaata-acagacttcaaaacgttctga 8396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 18325 - 18426
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg-tttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttgg 307  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||  | ||  |||||||| | |||||||||||| | ||||||    
T  18325 tgaagtagataaaatagtcacaagaaagggggggtttgaattgtgaccctttaaaaattatcc-tgaaacttaaaaatgattctcaagttgtttacttgg 18423  T
Q  308 aat 310  Q
    |||    
T  18424 aat 18426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 12406 - 12349
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaat 265  Q
    |||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  12406 ttgaagtaaataaaatagtcacaagaaaggggggtttgaattgtgaccctttaaaaat 12349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 385
Target Start/End: Complemental strand, 176 - 11
Alignment:
Q  216 gataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttggaatggtta 315  Q
    ||||||||||| |||| |||||||| ||||||||||||  |||| |||||||||| ||  |||||||| | |||||||| |||| || ||||||||||||    
T  176 gataaaatagtcacaaagaaggggg-tttgaattgtga-tcttttaaaattaaacctgtaacttaaaattgattctcaaattga-aatttggaatggtta 80  T
Q  316 agttaacagacagacttcataacgttctgaagtattagtataaacacaatttaaataattaaatgtgttt 385  Q
    ||| || || ||||||||| |||||| ||| || |||||  ||| ||| |||||  || |||||||||||    
T  79 agtaaaaag-cagacttcaaaacgttatgatgtcttagtgcaaaaacagtttaataaaataaatgtgttt 11  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 208 - 260
Target Start/End: Original strand, 13896 - 13948
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgacccttta 260  Q
    |||||||||||||||| || |||||||| ||||||||||||||||||||||||    
T  13896 ttgaagtagataaaatggtcacaaggaatgggggtttgaattgtgacccttta 13948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 348
Target Start/End: Complemental strand, 6558 - 6447
Alignment:
Q  236 ggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagttattctcaagttgataacttggaatggttaagttaacagacagacttcat 335  Q
    |||||| ||||||||||||||||||||| |||  | ||  |||||||||| |||||||||| | | ||||||||| |||||||||||   | |||||||     
T  6558 gggggggttgaattgtgaccctttaaaatttatcc-tgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaactttctgacttcag 6460  T
Q  336 aacgttctgaagt 348  Q
    |||||||||||||    
T  6459 aacgttctgaagt 6447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 6600 - 6568
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg 241  Q
    |||||||||||||||||| ||||||||||||||    
T  6600 tgaagtagataaaatagtcacaaggaagggggg 6568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 5956 - 6015
Alignment:
Q  208 ttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaa 268  Q
    |||||||| |||||||||| |||||||||||||| |||||||||||||| |||||||||||    
T  5956 ttgaagtaaataaaatagtcacaaggaagggggg-ttgaattgtgacccattaaaaattaa 6015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 296
Target Start/End: Complemental strand, 61131 - 61040
Alignment:
Q  205 aggttgaagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaaattaaacatgccacttaaaagtt-attctcaagt 296  Q
    ||||||||||| |||||||||| |||||| ||||||| ||||||||| ||||||||||| || ||| ||| |||||||| || ||||||||||    
T  61131 aggttgaagtaaataaaatagtcacaagg-agggggggttgaattgtaaccctttaaaagtttaacctgcaacttaaaaattaattctcaagt 61040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 211 - 316
Target Start/End: Complemental strand, 67325 - 67219
Alignment:
Q  211 aagtagataaaatagtaacaaggaaggggggtttgaattgtgaccc-tttaaaaattaaacatgccacttaaaagttattctcaagttgataacttggaa 309  Q
    |||| |||| |||| | |||||||| ||| |||||||||||||||| ||| |||||||||||||  |||||||| | ||||||||||||  || ||||||    
T  67325 aagttgatataatattcacaaggaatgggagtttgaattgtgaccctttttaaaattaaacatgtaacttaaaattcattctcaagttgtgaatttggaa 67226  T
Q  310 tggttaa 316  Q
    | |||||    
T  67225 tagttaa 67219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 266
Target Start/End: Complemental strand, 100604 - 100566
Alignment:
Q  228 acaaggaaggggggtttgaattgtgaccctttaaaaatt 266  Q
    ||||| |||||||||||||||||||||||||| ||||||    
T  100604 acaagaaaggggggtttgaattgtgacccttttaaaatt 100566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 267040 - 267085
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaaggggggtttgaattgtgacc 255  Q
    |||||||||||||||||| |||| || ||||||||||||||||||||    
T  267040 tgaagtagataaaatagtcacaaaga-ggggggtttgaattgtgacc 267085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 33 - 1
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg 241  Q
    |||||||||||||||||| ||||||||||||||    
T  33 tgaagtagataaaatagtcacaaggaagggggg 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 27738 - 27789
Alignment:
Q  211 aagtagataaaatagtaacaaggaaggggggtttgaattgtgaccctttaaaa 263  Q
    ||||||||||| |||| |||| |||||||  ||||||||||||||||||||||    
T  27738 aagtagataaattagtcacaaagaagggga-tttgaattgtgaccctttaaaa 27789  T

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Target: scaffold0048 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 65487 - 65519
Alignment:
Q  209 tgaagtagataaaatagtaacaaggaagggggg 241  Q
    |||||||||||||||||| ||||||||||||||    
T  65487 tgaagtagataaaatagtcacaaggaagggggg 65519  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 413635 - 413599
Alignment:
Q  228 acaaggaaggggggtttgaattgtgaccctttaaaaa 264  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  413635 acaagaaaggggggtttgaattgtgacccttttaaaa 413599  T

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