View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1429_low_21 (Length: 395)
Name: NF1429_low_21
Description: NF1429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1429_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 13 - 377
Target Start/End: Original strand, 44244707 - 44245076
Alignment:
| Q |
13 |
atactttgaacttctacataggagcaatatcagttgttaaagcttcaaacattagttcaacttggattatgagacacttttcttcgattgatttcatgat |
112 |
Q |
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| T |
44244707 |
atactttgaacttctacataggagcaatatcagttgttaaagcttcaaacattagttcaacttggattatgaaacacttttcttcgattgatttcatgat |
44244806 |
T |
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| Q |
113 |
gtttatataacaagatgttcccagatcttgttataannnnnnnngttaaagtatggagtattcattactgttagacgacaactaatctccatcggcggac |
212 |
Q |
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| T |
44244807 |
gtttatataacaagatgttcccagatcttgttataattttttttgttaaagtatggagtattcattactgttagatgacaactaatctccatcggcggac |
44244906 |
T |
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| Q |
213 |
ttattaggcatatagaatagatttcctcatccaactaaattttctcattttgcaatgt---ttgaatagtagggatgttgtacatttctcaatttaaata |
309 |
Q |
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| T |
44244907 |
ttattaggcatatagaatagatttcctcatccaactaaattttctcattttgcaatgtacattgaatagtagggatgttgtacatttctcaatttaaata |
44245006 |
T |
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| Q |
310 |
cagannnnnnnnattatagttctaaatatatctaag--tgtcttcattacgctcaaaacgataacaatgg |
377 |
Q |
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|||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
44245007 |
cagattttttttattatagttctaaatatatctaagtatgtcttcattacgctcaaaacgataacaatgg |
44245076 |
T |
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