View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14300_low_15 (Length: 502)
Name: NF14300_low_15
Description: NF14300
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14300_low_15 |
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Alignment Details
Target: chr2 (Bit Score: 469; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 469; E-Value: 0
Query Start/End: Original strand, 11 - 487
Target Start/End: Original strand, 22995392 - 22995868
Alignment:
| Q |
11 |
cacagaaacccagacccaaactcaacctttcattaacccacctcttaccatagttaccaacattatccttagcaatgtgtgcattgagatctttgaaagt |
110 |
Q |
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| T |
22995392 |
cacagaaacccagacccaaactcaacctttcattaacccacctcttaccatagttaccaacattatccttagcaatgtgtgcattgagatctttgaaagt |
22995491 |
T |
|
| Q |
111 |
ctgatggagcttgttgaagatagaaacaaagatatgccttctatccactatattattaaatgggataagctcaggaagttagttggttgatgctactctg |
210 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22995492 |
ctgatggagtttgttgaagatagaaacaaagatatgccttctatccactatattattaaatgggataagctcaggaagttagttggttgatgctactctg |
22995591 |
T |
|
| Q |
211 |
gataatcttcaagaaatggatgttacctctcaacaataagctctacaagactagttttctgaagtctacaaaagcatggatgaagttgagcttagaactc |
310 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22995592 |
gataatcttcaagaaatggatgttacctctcaacaataagctctacaagactagttttctgaagtctacaaaagcatggatgaagttgagcttagaactc |
22995691 |
T |
|
| Q |
311 |
acatctcaaggcagattgagtattcagagttgatcaaggagcttgagcctacacaagaagctccaattcctgaagtcccagaagtagtgaagtctggact |
410 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
22995692 |
acatctcaaggcagattgagtattcagagttgatcaaggagcttgagcctacacaagaagctgcaattcctgaagtcccagaagtagtgaagtctggact |
22995791 |
T |
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| Q |
411 |
tcaaggtttggctagctaacttcttcaagaagccatagcctataattctcaagagtcaagaccctgaggtagttgct |
487 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22995792 |
tcaaggtttggctagctaacttcttcaagaagccatagcctataattctcaagagtcaagaccctgaggtagttgct |
22995868 |
T |
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