View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14300_low_37 (Length: 270)
Name: NF14300_low_37
Description: NF14300
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14300_low_37 |
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Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 19 - 253
Target Start/End: Original strand, 38653648 - 38653872
Alignment:
| Q |
19 |
cgactaattaacttattcaaccaagtcatcatgtgggagaatcccatttccaatattgattggaataacttttaacgaactgttttatttagggagctgg |
118 |
Q |
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| T |
38653648 |
cgactaattaacttattcaaccaagtcatcatgtgggagaatcccatttcgaa----------aataacttttaacgaactgttttatttagggagctgg |
38653737 |
T |
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| Q |
119 |
agtggagggtgaaagaaatcccaacaataaaaaataaacctaatcctaaaccaagaaattgttttataagattatcatataaatattcaccttggtgctt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38653738 |
agtggagggtgaaagaaatcccaacaataaaaaataaacctaatcctaaaccaagaaattgttttataagattatcatataaatattcaccttggtgctt |
38653837 |
T |
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| Q |
219 |
aatttgggggataggagaagatgaattgtcaaaga |
253 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
38653838 |
aatttgggggataggagaagatgaattgtcaaaga |
38653872 |
T |
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