View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14300_low_55 (Length: 215)
Name: NF14300_low_55
Description: NF14300
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14300_low_55 |
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Alignment Details
Target: chr5 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 16 - 197
Target Start/End: Complemental strand, 27426128 - 27425947
Alignment:
| Q |
16 |
aatatgtcgccttgtgagaatcattgttcaagaattttccaaacaagtgcagcttcatcaatcaacaatgtttttgaggaaaaatttcagcaaattgaag |
115 |
Q |
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| T |
27426128 |
aatatgtcgccttgtgagaatcattgttcaagaattttccaaacaagtgcagcttcatcaatcaacaatgtttttgaggaaaaatttcagcaaattgaag |
27426029 |
T |
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| Q |
116 |
gatccacatatgatagaactctcaaagattttacttttacatcttgaacatgccaaccaaatccgaagccaagcaacacatt |
197 |
Q |
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| T |
27426028 |
gatccacatatgatagaactctcaaagattttacttttacatcttgaacatgccaaccaaatccgaagccaagcaacacatt |
27425947 |
T |
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