View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14303_high_4 (Length: 344)
Name: NF14303_high_4
Description: NF14303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14303_high_4 |
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Alignment Details
Target: chr4 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 9 - 330
Target Start/End: Complemental strand, 40212505 - 40212184
Alignment:
| Q |
9 |
atgaaattgtatatattagtattaggatttgcaaaatgcaataagtatttctgtattttacgttgccgtccaaaatctgaaccgcgttaaagaaatccca |
108 |
Q |
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| T |
40212505 |
atgacattgtatatattagtattaggatttgcaaaatgcaataagtatttctgtattttacgttgccgtccaaaatctgaaccgcgttaaagaaatccca |
40212406 |
T |
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| Q |
109 |
acagaaaaccgtgttgacatgttttctgttttgagttctaagggaagtgaattaatattttataagatacatattatttgatagtttatactttataata |
208 |
Q |
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| T |
40212405 |
acagaaaaccgtgttgacatgttttctgttttgagttctaagggaagtgaattaatattttataagatacatattattttatagtttatactttataata |
40212306 |
T |
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| Q |
209 |
ttaatgcttaaactaccagaaacgaagttcatgatatgttagttagtagtaccccaaagtattagcttctatgtcacatgcatatgttgttgacaagaat |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40212305 |
ttaatgcttaaactaccagaaacgaagttcatgatatgttagttagtagtaccccaaagtattagcttctatgtcacatgcatatgttgttgacaagaat |
40212206 |
T |
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| Q |
309 |
ttggaaatcgaccgaaattcct |
330 |
Q |
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|||||||||||||||||||||| |
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| T |
40212205 |
ttggaaatcgaccgaaattcct |
40212184 |
T |
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