View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14303_low_7 (Length: 326)

Name: NF14303_low_7
Description: NF14303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14303_low_7
NF14303_low_7
[»] chr1 (1 HSPs)
chr1 (16-310)||(7652434-7652728)


Alignment Details
Target: chr1 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 16 - 310
Target Start/End: Complemental strand, 7652728 - 7652434
Alignment:
Q  16 ataatacacactttcagtatccagacaatttataccgtcaagtcaagaacatgtgaggatttttaaaagctaaggagagaaaaattaagtaaggatcaca 115  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7652728 ataatacacacttccagtatccagacaatttataccgtcaagtcaagaacatgtgaggatttttaaaagctaaggagagaaaaattaagtaaggatcaca 7652629  T
Q  116 tgtgcctcatgttcaccaagataacgtcattgagtatgttagaagaaatcaattgggttgtactaaatcgaagacaatatagcttacatgatgataagcc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7652628 tgtgcctcatgttcaccaagataacgtcattgagtatgttagaagaaatcaattgggttgtactaaatcgaagacaatatagcttacatgatgataagcc 7652529  T
Q  216 ccggtcaatatatgacattaaagaaatttctaacaaaagaaaattgcattctttgacaagtagatgaagatgaggttaaaaaacatcgtgagatc 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7652528 ccggtcaatatatgacattaaagaaatttctaacaaaagaaaattgcattctttgacaagtagatgaagatgaggttaaaaaacatcgtgagatc 7652434  T

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