View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14303_low_9 (Length: 299)
Name: NF14303_low_9
Description: NF14303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14303_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 14 - 284
Target Start/End: Complemental strand, 44407617 - 44407341
Alignment:
| Q |
14 |
atatcaaaatagatagtaaaaccaaacacaacatatatgataaattctaagtcnnnnnnnnttaaagtttaagaatctaaaattgaagtacaacattaat |
113 |
Q |
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| T |
44407617 |
atatcaaaatagatagtaaaaccaaacacaacaaatatgataaattctaagtcaaaaaaatttaaagtttaagaatctaaaattgaagtacaacattaat |
44407518 |
T |
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| Q |
114 |
gtt--acttttaagtaagtgaacatttggagatgatcaataaaacacttgcattgaatatagttagatcctaataatcacataaattacatttcggttat |
211 |
Q |
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| T |
44407517 |
gttgaacttttaagtaagtgaacatttggagatgatcaataaaacacttgcattgaatatagttagatcctaataatcacataaattacatttcggttat |
44407418 |
T |
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| Q |
212 |
tagttagcaataaatactaacatcaatgaa----ttaagttgattgaaatcaaaacaccattacattgcatatagtg |
284 |
Q |
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|||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
44407417 |
tagttagcaataaatactaacatcaatgaattaattaaggtgattgaaatcaaaacaccattacattgcatatagtg |
44407341 |
T |
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