View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14304_high_21 (Length: 267)
Name: NF14304_high_21
Description: NF14304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14304_high_21 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 30 - 267
Target Start/End: Original strand, 31300199 - 31300436
Alignment:
| Q |
30 |
ttccttaaaatttatactaatcatcttccacctatctttgttatgaaaagcatacttcacagtagttgtcgtcttacactctctcaggctttaaaagagg |
129 |
Q |
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| T |
31300199 |
ttccttaaaatttatactaatcatcttccacctatctttgttatgaaaagcatacttcacagtagttgtcgtcttacactctctcaggctttaaaagagg |
31300298 |
T |
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| Q |
130 |
tttttcatcaggtggttgttgagtctggttttgaaagtgtatgagctcgattgatactgcttcttcgttgtacataatatgtatcaagccttagactagg |
229 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31300299 |
tttttcatcaggtggttgttgagtttggttttgaaagtgtatgagctcgattgttactgcttcttcgttgtacataatatgtatcaagccttagactagg |
31300398 |
T |
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| Q |
230 |
catgatttcacgtctgtgaatcagaagttcttccaaca |
267 |
Q |
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| T |
31300399 |
cgtgatttcacgtatgtgaatcagaagttcttccaaca |
31300436 |
T |
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