View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14305_low_11 (Length: 232)
Name: NF14305_low_11
Description: NF14305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14305_low_11 |
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Alignment Details
Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 47616570 - 47616357
Alignment:
| Q |
1 |
ttgaagaagattcagatattacttacaccatttttcttcctcttgttgaaggctcattcagagcttgtcttcaaggaaacgtttccaacgataatcttga |
100 |
Q |
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| T |
47616570 |
ttgaagaagattcagatattacttacaccatttttcttcctcttgttgaaggctcattcagagcttgtcttcaaggaaacgtttccaacgataatcttga |
47616471 |
T |
|
| Q |
101 |
actttgcattgaaagcggcgacgttgataccaaaacgtcgtcgttttctcattctttgttcatcaccgctggtaccgatccgtttgcgacgatccacaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47616470 |
actttgcattgaaagcggcgacgttgataccaaaacgtcgtcgttttctcatgctttgttcatcaccgctggtaccgatccgtttgcgacgatccacaat |
47616371 |
T |
|
| Q |
201 |
gcttacacggcggt |
214 |
Q |
| |
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|||| ||| ||||| |
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| T |
47616370 |
gctttcactgcggt |
47616357 |
T |
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