View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14305_low_2 (Length: 510)
Name: NF14305_low_2
Description: NF14305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14305_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 482; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 11 - 492
Target Start/End: Original strand, 38919569 - 38920050
Alignment:
| Q |
11 |
gagtgagaagaatgagtgcaagaggtgttgtagtggtgagtgccatgttggtaagttagtgaaggagaattaagatttgaagatgaggtttggtgagtat |
110 |
Q |
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| T |
38919569 |
gagtgagaagaatgagtgcaagaggtgttgtagtggtgagtgccatgttggtaagttagtgaaggagaattaagatttgaagatgaggtttggtgagtat |
38919668 |
T |
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| Q |
111 |
gtggagaggtggagaggggttttatttggagaggaatattattaataaggtaatttggttgagaatttgttggcatgagctggatcaaggctagcatata |
210 |
Q |
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| T |
38919669 |
gtggagaggtggagaggggttttatttggagaggaatattattaataaggtaatttggttgagaatttgttggcatgagctggatcaaggctagcatata |
38919768 |
T |
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| Q |
211 |
tcaatatattcccttagttgacaaatgaatacaaaaataaatcacatcaaagttgcaataaggaatgaagtttaacatttggttggaatgataagaaatt |
310 |
Q |
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| T |
38919769 |
tcaatatattcccttagttgacaaatgaatacaaaaataaatcacatcaaagttgcaataaggaatgaagtttaacatttggttggaatgataagaaatt |
38919868 |
T |
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| Q |
311 |
acatgttgtgttatatatgcaagtttgcaaaaagtcaagcctaatttgttttggtaggttgcattatatggaaattctttagagtggatcaaatacagac |
410 |
Q |
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| T |
38919869 |
acatgttgtgttatatatgcaagtttgcaaaaagtcaagcctaatttgttttggtaggttgcattatatggaaattctttagagtggatcaaatacagac |
38919968 |
T |
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| Q |
411 |
cctagtttgctgtaaaaggaatgagatacttcttatactgattaaccattgttttatgttcattaaaagaaagtgtttcttc |
492 |
Q |
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| T |
38919969 |
cctagtttgctgtaaaaggaatgagatacttcttatactgattaaccattgttttatgttcattaaaagaaagtgtttcttc |
38920050 |
T |
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