View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14307_high_2 (Length: 738)

Name: NF14307_high_2
Description: NF14307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14307_high_2
NF14307_high_2
[»] chr6 (109 HSPs)
chr6 (20-723)||(28140594-28141297)
chr6 (29-655)||(29827054-29827680)
chr6 (127-587)||(29842548-29843008)
chr6 (29-621)||(28186462-28187060)
chr6 (28-643)||(28096952-28097558)
chr6 (182-468)||(28244016-28244302)
chr6 (26-640)||(28326543-28327157)
chr6 (26-640)||(28504179-28504793)
chr6 (59-642)||(28296241-28296824)
chr6 (59-642)||(28515249-28515832)
chr6 (26-655)||(2185891-2186508)
chr6 (29-383)||(28240422-28240775)
chr6 (172-397)||(27609866-27610091)
chr6 (127-419)||(27704978-27705270)
chr6 (105-396)||(27680094-27680385)
chr6 (127-383)||(26624437-26624693)
chr6 (127-383)||(26730414-26730670)
chr6 (29-292)||(26812596-26812859)
chr6 (29-336)||(26950811-26951118)
chr6 (105-388)||(27426367-27426650)
chr6 (513-643)||(28150724-28150854)
chr6 (517-653)||(29469759-29469895)
chr6 (172-393)||(27697336-27697557)
chr6 (105-394)||(28787382-28787671)
chr6 (172-388)||(27717254-27717470)
chr6 (170-394)||(31285768-31285992)
chr6 (105-383)||(27676380-27676658)
chr6 (105-394)||(28793503-28793792)
chr6 (89-249)||(26636774-26636934)
chr6 (89-249)||(26742740-26742900)
chr6 (105-383)||(27591781-27592059)
chr6 (518-607)||(26624816-26624905)
chr6 (518-607)||(26730793-26730882)
chr6 (28-468)||(26938096-26938536)
chr6 (89-245)||(26960253-26960409)
chr6 (515-642)||(29758956-29759083)
chr6 (29-247)||(25074935-25075153)
chr6 (105-394)||(26803590-26803879)
chr6 (516-641)||(26863123-26863248)
chr6 (515-607)||(26885633-26885725)
chr6 (153-296)||(26849904-26850047)
chr6 (173-388)||(26862792-26863007)
chr6 (516-599)||(26960677-26960760)
chr6 (513-608)||(27529845-27529940)
chr6 (515-606)||(27680513-27680604)
chr6 (516-587)||(27697148-27697219)
chr6 (515-642)||(29673519-29673646)
chr6 (517-587)||(26850277-26850347)
chr6 (270-388)||(27530059-27530177)
chr6 (511-572)||(25484603-25484664)
chr6 (511-572)||(26144412-26144473)
chr6 (158-394)||(26647676-26647912)
chr6 (158-394)||(26753644-26753880)
chr6 (29-249)||(28182186-28182406)
chr6 (518-653)||(28902153-28902288)
chr6 (517-587)||(27591574-27591644)
chr6 (172-394)||(27663963-27664185)
chr6 (517-587)||(27676173-27676243)
chr6 (513-587)||(27704822-27704896)
chr6 (522-584)||(31286114-31286176)
chr6 (511-572)||(25512435-25512496)
chr6 (517-574)||(26637193-26637250)
chr6 (517-574)||(26743159-26743216)
chr6 (127-388)||(26824985-26825246)
chr6 (522-642)||(26938581-26938701)
chr6 (513-653)||(27215998-27216138)
chr6 (515-587)||(28787804-28787876)
chr6 (515-587)||(28793925-28793997)
chr6 (524-655)||(26804018-26804149)
chr6 (29-160)||(28235633-28235764)
chr6 (515-606)||(29694932-29695023)
chr6 (517-587)||(25075432-25075502)
chr6 (518-572)||(25581273-25581327)
chr6 (515-633)||(26657525-26657643)
chr6 (515-633)||(26763496-26763614)
chr6 (517-575)||(26813102-26813160)
chr6 (517-587)||(27603254-27603324)
chr6 (513-587)||(27609679-27609753)
chr6 (513-587)||(27717058-27717132)
chr6 (531-609)||(29476608-29476686)
chr6 (515-572)||(25546531-25546588)
chr6 (136-209)||(26057097-26057170)
chr6 (515-572)||(26057470-26057527)
chr6 (136-209)||(26077067-26077140)
chr6 (515-572)||(26077440-26077497)
chr6 (516-573)||(26951295-26951352)
chr6 (172-492)||(26885278-26885598)
chr6 (156-212)||(27530235-27530291)
chr6 (513-584)||(26825374-26825445)
chr6 (520-587)||(27663762-27663829)
chr6 (136-206)||(25484234-25484304)
chr6 (520-574)||(25491879-25491933)
chr6 (136-206)||(26144043-26144113)
chr6 (513-587)||(26648019-26648093)
chr6 (513-587)||(26753987-26754061)
chr6 (530-608)||(29523458-29523536)
chr6 (156-209)||(25512086-25512139)
chr6 (520-573)||(26978936-26978989)
chr6 (518-599)||(28490040-28490121)
chr6 (518-599)||(29802450-29802531)
chr6 (193-249)||(26978612-26978668)
chr6 (29-113)||(28228020-28228104)
chr6 (28-76)||(29523097-29523145)
chr6 (102-220)||(25492242-25492360)
chr6 (136-206)||(25539718-25539788)
chr6 (173-419)||(27603428-27603674)
chr6 (426-468)||(28150646-28150688)
chr6 (521-651)||(29727451-29727581)
chr6 (173-246)||(29476962-29477035)
[»] chr2 (6 HSPs)
chr2 (29-464)||(3280727-3281162)
chr2 (514-642)||(17991704-17991832)
chr2 (29-249)||(17992109-17992329)
chr2 (172-225)||(17713508-17713561)
chr2 (177-225)||(17662487-17662535)
chr2 (526-617)||(3281218-3281309)
[»] chr5 (1 HSPs)
chr5 (29-653)||(16691935-16692550)
[»] chr4 (15 HSPs)
chr4 (29-458)||(5089635-5090064)
chr4 (105-388)||(18074905-18075188)
chr4 (127-416)||(18654200-18654489)
chr4 (127-336)||(18678363-18678572)
chr4 (127-416)||(18698123-18698412)
chr4 (127-336)||(18722888-18723097)
chr4 (127-416)||(18730227-18730516)
chr4 (127-249)||(18688516-18688638)
chr4 (517-586)||(18688179-18688248)
chr4 (515-586)||(18730060-18730131)
chr4 (517-586)||(18678122-18678191)
chr4 (517-586)||(18697965-18698034)
chr4 (517-586)||(18722635-18722704)
chr4 (517-586)||(18654042-18654111)
chr4 (516-572)||(5089533-5089589)
[»] scaffold0019 (1 HSPs)
scaffold0019 (29-642)||(56795-57408)
[»] scaffold0038 (4 HSPs)
scaffold0038 (182-468)||(44178-44464)
scaffold0038 (29-383)||(40584-40937)
scaffold0038 (29-160)||(35795-35926)
scaffold0038 (29-113)||(28518-28602)
[»] scaffold0003 (1 HSPs)
scaffold0003 (105-388)||(60713-60996)
[»] chr1 (7 HSPs)
chr1 (516-642)||(26137434-26137560)
chr1 (172-396)||(267087-267311)
chr1 (37-388)||(26136964-26137315)
chr1 (520-642)||(5921979-5922101)
chr1 (515-607)||(266888-266980)
chr1 (265-396)||(5922216-5922347)
chr1 (127-587)||(28126243-28126691)
[»] scaffold0277 (4 HSPs)
scaffold0277 (105-394)||(3461-3750)
scaffold0277 (105-394)||(12424-12713)
scaffold0277 (518-607)||(3242-3331)
scaffold0277 (518-607)||(12205-12294)
[»] scaffold0419 (2 HSPs)
scaffold0419 (105-394)||(8631-8920)
scaffold0419 (515-584)||(9050-9119)
[»] scaffold0349 (2 HSPs)
scaffold0349 (172-388)||(2294-2510)
scaffold0349 (513-587)||(2098-2172)
[»] chr8 (9 HSPs)
chr8 (259-382)||(35984597-35984720)
chr8 (515-642)||(12590286-12590413)
chr8 (516-653)||(16371627-16371764)
chr8 (516-606)||(16441599-16441689)
chr8 (524-638)||(35984859-35984973)
chr8 (192-381)||(31906285-31906474)
chr8 (29-225)||(16441124-16441320)
chr8 (524-652)||(31906614-31906742)
chr8 (520-642)||(16450445-16450567)
[»] scaffold0573 (1 HSPs)
scaffold0573 (518-653)||(7506-7641)
[»] chr3 (1 HSPs)
chr3 (515-642)||(615341-615468)
[»] scaffold1870 (2 HSPs)
scaffold1870 (193-394)||(1-202)
scaffold1870 (515-584)||(332-401)
[»] scaffold0012 (2 HSPs)
scaffold0012 (515-642)||(211631-211758)
scaffold0012 (515-653)||(238363-238502)
[»] scaffold0007 (3 HSPs)
scaffold0007 (522-653)||(67865-67996)
scaffold0007 (523-653)||(32519-32649)
scaffold0007 (523-653)||(37268-37398)


Alignment Details
Target: chr6 (Bit Score: 700; Significance: 0; HSPs: 109)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 700; E-Value: 0
Query Start/End: Original strand, 20 - 723
Target Start/End: Original strand, 28140594 - 28141297
Alignment:
Q  20 gggttgtcgttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagtt 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28140594 gggttgtcgttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagtt 28140693  T
Q  120 gctgaaatggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggcttta 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28140694 gctgaaatggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggcttta 28140793  T
Q  220 gaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatac 319  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28140794 gaagtagttggttctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatac 28140893  T
Q  320 ttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggatatatattagcagaggttgaagatat 419  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28140894 ttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggatatatattagcagaggttgaagatat 28140993  T
Q  420 tctctatgctcattacggtgaatgcatgaaatatcatattagagtgttgatcgagaaatgtctaataaagatttatagacaatgtggttgtacttatgtg 519  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28140994 tctctatgctcattacggtgaatgcatgaaatatcatattagagtgttgatcgagaaatgtctaataaagatttatagacaatgtggttgtacttatgtg 28141093  T
Q  520 acattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagaca 619  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28141094 acattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagaca 28141193  T
Q  620 tagtccaagttttagaagaaaatttggtgagtaagactggtatagatgttttttagtctttaacctttattttgtccctgttccatctgctgccaatgcc 719  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28141194 tagtccaagttttagaagaaaatttggtgagtaagactggtatagatgttttttagtctttaacctttattttgtccctgttccatctgctgccaatgcc 28141293  T
Q  720 tatg 723  Q
    ||||    
T  28141294 tatg 28141297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 29 - 655
Target Start/End: Original strand, 29827054 - 29827680
Alignment:
Q  29 ttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaaatg 128  Q
    |||| ||||||||| ||||||||||| || ||||||||||| | ||||  ||| || |||||| | |||||| |  |||| | || || ||  | |  ||    
T  29827054 ttaccactcgagaccaacatttgctaacaagtcatgggattcatagaaaatatcaagtagatgcgctaaataggatagaatcccttgaattatttaggtg 29827153  T
Q  129 gaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagtt 228  Q
    ||| || |||||| ||| || || ||||||||| |||||  |||||||| |||||||| |  ||||||| ||||||||||| |||| ||||||| ||||     
T  29827154 gaaagcttttaaagatagtataggtgattcaagatatgatgacattttagaccgtgcaatagcttatgcttctggccttccgttggttttagaattagta 29827253  T
Q  229 gattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtga 328  Q
    | | |    |||||||||||| ||| ||| || |||||||||| ||||||| | ||||||||||||||| |||||||| |||  || ||||||||| | |    
T  29827254 ggtcccgcgttgtttggaaagaatatagaagaatggaaatctatattagatagatatgaaaggattcctaataaagagatccaaaatatacttaaaataa 29827353  T
Q  329 gctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggatatatattagcagaggttgaagatattctctatgc 428  Q
    | ||||||  ||||||| ||||||| ||| ||||||||||||||||||||||||| |||| ||| |||   || | ||||||  |||||||||| | |||    
T  29827354 gttttgatgctttggaggaagatgaacaaggtgtttttctcgacattgcttgttgcttcaaagggtatgatttgggagaggtcaaagatattctttgtgc 29827453  T
Q  429 tcattacggtgaatgcatgaaatatcatattagagtgttgatcgagaaatgtctaataaagatttatagacaatgtggttg---tacttatgtgacatta 525  Q
    |||| | ||| || ||||  ||||||||||| |||||||| |||| |||  ||| ||| |||||  |   || |  |||     | ||  ||||||||||    
T  29827454 tcatcatggtcaaagcatagaatatcatattggagtgttggtcgaaaaaactctcatacagattatt---catttgggtacggatgctgttgtgacatta 29827550  T
Q  526 catgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagacatagtcc 625  Q
    |||||||||||||| || ||||||||||||||||| |||||||||||||| ||||||||||| || || ||||| || |||||| || |||| ||||| |    
T  29827551 catgacttgatagaagacatgggtaaagaaattgtacgacaagaatcaccgaaagagcctggaaagcgtagtaggttgtggttctatgaagatatagttc 29827650  T
Q  626 aagttttagaagaaaatttggtgagtaaga 655  Q
    |||| ||||||||||||| |||||||||||    
T  29827651 aagtcttagaagaaaattcggtgagtaaga 29827680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 127 - 587
Target Start/End: Complemental strand, 29843008 - 29842548
Alignment:
Q  127 tggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtag 226  Q
    ||||| || |||||||||| || |||||||||||| |||||  |||||||| |||||||| |  ||||||| ||||||||||| |||| ||||||| |||    
T  29843008 tggaaagcttttaaaaatagtatagttgattcaagctatgatgacattttagaccgtgcaatagcttatgcttctggccttccgttggttttagaattag 29842909  T
Q  227 ttgattctagc-ttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaag 325  Q
    | |  || ||| |||||||||||| ||| ||| || |||||||||||||||||| ||||||||||||||||| |||||||| |||  || |||||||||     
T  29842908 tag-gtccagctttgtttggaaagaatatagaagaatggaaatctacattagataggtatgaaaggattcctaataaagagatccacaatatacttaaaa 29842810  T
Q  326 tgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggatatatattagcagaggttgaagatattctcta 425  Q
    | |||||||||  ||||||| |||| || ||| ||||||||||||||||||||||||| |||| ||| |||   || | |||||||||||||||||| |     
T  29842809 taagctttgatgctttggaggaagacgaacaaggtgtttttctcgacattgcttgttgcttcaaagggtatgatttgggagaggttgaagatattctttg 29842710  T
Q  426 tgctcattacggtgaatgcatgaaatatcatattagagtgttgatcgagaaatgtctaataaagatttatagacaatgtggtt---gtacttatgtgaca 522  Q
    |||| || | ||| |||||||  ||||||||||| |||||||| |||| |||  ||| ||||||||   ||  || |   |||    | ||  |||||||    
T  29842709 tgcttatcatggtcaatgcatagaatatcatattggagtgttggtcgaaaaaactctcataaagat---tattcagttgagttcgcatgctattgtgaca 29842613  T
Q  523 ttacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgg 587  Q
     |||||||||||||||| || ||||||||||||||||| |||| ||||||| | |||||||||||    
T  29842612 ctacatgacttgatagaagacatgggtaaagaaattgtacgaccagaatcaacgaaagagcctgg 29842548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 29 - 621
Target Start/End: Original strand, 28186462 - 28187060
Alignment:
Q  29 ttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaaatg 128  Q
    |||| |||||||||||||| ||||||||   |||||||||||| ||| | ||| || || ||  ||||||| || |||||||||| || ||| |||  ||    
T  28186462 ttaccactcgagacaaacaattgctagctcatcatgggattgaaagagcatataaattacataagttaaatgagaaagaagctcttgaattgttgacgtg 28186561  T
Q  129 gaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagtt 228  Q
    |||||| || |||||||| ||||||||| ||| ||  ||   | ||||| ||| |||||| |||||||| |||||||||||||||||||||||||||||     
T  28186562 gaaggctttaaaaaataacaaagttgatacaaatttcgacagcgttttacaccatgcagtaacttatgcttctggccttccattggctttagaagtagtg 28186661  T
Q  229 gattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtga 328  Q
    | ||| | ||||||||||||| ||| ||  || ||||||||| ||||| ||| |||||||||||||||  ||||| || |||   ||||||| ||||| |    
T  28186662 ggttccaacttgtttggaaagaatataggagaatggaaatctgcattaaatcagtatgaaaggattcccgataaaaagatccaagagatactcaaagtaa 28186761  T
Q  329 gctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggatatatattagcagaggttgaagatattctctatgc 428  Q
    ||||||||  ||||| | |||  || |||| ||||||||||||||| ||||| || |||| |||||||  |||   |||  |||||||| | ||  ||||    
T  28186762 gctttgatgctttgggggaagcagaacaaaatgtttttctcgacatcgcttgctgcttcaaaggatatgaattgaaagaacttgaagatgtacttcatgc 28186861  T
Q  429 tcattacggtgaatgcatgaaatatcatattagagtgttgatcgagaaatgtctaataaagat---ttatagacaatgtggttgtactta---tgtgaca 522  Q
    |||||| ||| | |||||||||||||| || ||||||||| |||| |||| |||  |||| ||     |  | |||||  ||  |||| |   ||||||     
T  28186862 tcattatggtaactgcatgaaatatcaaatcagagtgttgctcgataaatctctcctaaatatcaagcagtgccaatggagtcttactgatgttgtgacg 28186961  T
Q  523 ttacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagacata 621  Q
    ||||||| |||||||||| | ||||||||||||||||| ||  |||| || |||||||||||||| | ||| ||||| || ||||||||||||||||||    
T  28186962 ttacatgccttgatagagaaaatgggtaaagaaattgtccggaaagagtctccaaaagagcctggaagacgtagtaggttgtggttccataaagacata 28187060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 28 - 643
Target Start/End: Complemental strand, 28097558 - 28096952
Alignment:
Q  28 gttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaaat 127  Q
    ||||| |||||||| ||| | ||||||||| |||||||||||||   ||| ||||||  | | | |||||| ||| ||||||| || || ||||| |  |    
T  28097558 gttaccactcgagataaaaacttgctagcaagtcatgggattgaagtaacatatgaaacacacgagttaaacaagaaagaagcccttgaattgcttaggt 28097459  T
Q  128 ggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagt 227  Q
    ||||||| ||||||  |||  ||||||||||||||||||||   ||||||||||||||| | | ||||||  |||||||||||||||| || ||| || |    
T  28097458 ggaaggcttttaaagctaaacaagttgattcaagttatgagtgtattttaaaccgtgcaataaattatgctgctggccttccattggccttggaaatatt 28097359  T
Q  228 tgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtg 327  Q
     | ||| | ||||| ||||||||||| ||| || ||||| |||   || ||||| |||||||| ||||||  | ||||| | |  || ||||||   |||    
T  28097358 aggttccaacttgtatggaaagcatatagaagaatggaattctttgttggatcgatatgaaagaattcctagtgaagagattcaaaaaatacttcgtgtg 28097259  T
Q  328 agctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggatatatattagcagaggttgaagatattctctatg 427  Q
    || ||||||  ||||||| ||||||||   |||||||||||||||||||||||||| |||| ||| |||| |||   |||||| |||||||| || | ||    
T  28097258 agttttgatgctttggaggaagatgagaggagtgtttttctcgacattgcttgttgcttcaaagggtataaattgaaagaggtggaagatatgctttgtg 28097159  T
Q  428 ctcattacggtgaatgcatgaaatatcatattagagtgttgatcgagaaatgtctaataaagatttatagacaatgtggttgtacttatgtgacattaca 527  Q
    ||||||||||| || |||||| |||||| ||| |||||||| |  | |||| |||  | ||||||  ||    ||| |      ||| ||||||||||||    
T  28097158 ctcattacggtcaacgcatgagatatcacattggagtgttggttaaaaaatctcttgtgaagattatta----atgagcg----ctt-tgtgacattaca 28097068  T
Q  528 tgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagacatagtccaa 627  Q
    |||||||||||| || |||||||||||||||||  ||||||||||||||||||| ||||| ||||| || || || | ||||||| |||| ||| | |||    
T  28097067 tgacttgatagaagacatgggtaaagaaattgtaagacaagaatcaccaaaagaacctggaaaacgtagcaggttgtcgttccatgaagatatatttcaa 28096968  T
Q  628 gttttagaagaaaatt 643  Q
    ||||||||||||||||    
T  28096967 gttttagaagaaaatt 28096952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 182 - 468
Target Start/End: Original strand, 28244016 - 28244302
Alignment:
Q  182 gtgcagttacttatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcg 281  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||| | ||| | ||| ||||||||  ||| ||  || ||||||||| ||||||||||    
T  28244016 gtgcagtaacttatgcttctggccttccattggctttagaagtagtgggttcaaacttatttggaaataatataggagaatggaaatctgcattagatcg 28244115  T
Q  282 gtatgaaaggattcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgt 381  Q
    ||||  |||||||||   |||| || | | | ||||||||||||| |||||||||  |||||||||||||||||| | |||||||||||||||||||||     
T  28244116 gtatagaaggattccgattaaaaagatacaggagatacttaaagtaagctttgatgctttggagaaagatgagcagaatgtttttctcgacattgcttgc 28244215  T
Q  382 tgtttcagaggatatatattagcagaggttgaagatattctctatgctcattacggtgaatgcatgaaatatcatattagagtgttg 468  Q
    || |||| ||||||||  ||   |||  |||||||||| || ||||||||||| ||| | |||||||||||||| || || ||||||    
T  28244216 tgcttcaaaggatataatttgaaagaacttgaagatatactttatgctcattatggtaactgcatgaaatatcaaatcagtgtgttg 28244302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 26 - 640
Target Start/End: Original strand, 28326543 - 28327157
Alignment:
Q  26 tcgttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaa 125  Q
    ||||||| |||||||||||||||||||||  | |||| |||||||| ||| | |||||| |   |  ||||| ||||  ||||||||| || ||| |||     
T  28326543 tcgttaccactcgagacaaacatttgctaaaaagtcacgggattgaaagagcatatgaaattcctaagttaattaagagagaagctcttgaattgttgag 28326642  T
Q  126 atggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagta 225  Q
     |||||  | || |||||||| ||||| ||||||| || |||   ||||||| || ||||||| |||||||| |||||||||||||||||||||||||||    
T  28326643 gtggaatactttcaaaaataacaaagtcgattcaaattttgacggcattttatactgtgcagtaacttatgcttctggccttccattggctttagaagta 28326742  T
Q  226 gttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaag 325  Q
    || | ||| | ||||||||||||| ||| ||  || || |||||| ||||| ||| |||||||||||||||   |||| || |||    |||||||||||    
T  28326743 gtgggttccaacttgtttggaaagaatatagtagaatgtaaatctgcattatatcagtatgaaaggattcccattaaaaagatccaagcgatacttaaag 28326842  T
Q  326 tgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggatatatattagcagaggttgaagatattctcta 425  Q
    | |||||||||  ||||||  |||||||||| | ||||||||||||||||||||| || ||||  ||||||  |||   |||  |||||||||| ||  |    
T  28326843 taagctttgatgctttggatgaagatgagcagaatgtttttctcgacattgcttgctgcttcaatggatatgaattgaaagaacttgaagatatacttca 28326942  T
Q  426 tgctcattacggtgaatgcatgaaatatcatattagagtgttgatcgagaaatgtctaataaagatttatagacaatgtggttgtacttatgtgacatta 525  Q
    ||||||||| ||| | | |||||| ||||| || || |||||| | || |||| ||| || |||||  |       || |    || |||| | ||||||    
T  28326943 tgctcattatggtaactccatgaagtatcaaatcagtgtgttgcttgaaaaatctctcatcaagatcaaccagttctgggagactagttatcttacatta 28327042  T
Q  526 catgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagacatagtcc 625  Q
    |||| ||| || ||| | || |||||||||||||||||||||||||| | |||||| ||||| ||| | ||||| || ||||| |||||||| ||| | |    
T  28327043 catgccttaatggagcaaataggtaaagaaattgttcgacaagaatccctaaaagaacctggaaaatgtagtaggttgtggtttcataaagatataattc 28327142  T
Q  626 aagttttagaagaaa 640  Q
    | || ||||||||||    
T  28327143 atgtcttagaagaaa 28327157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 26 - 640
Target Start/End: Original strand, 28504179 - 28504793
Alignment:
Q  26 tcgttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaa 125  Q
    ||||||| |||||||||||||||||||||  | |||| |||||||| ||| | |||||| |   |  ||||| ||||  ||||||||| || ||| |||     
T  28504179 tcgttaccactcgagacaaacatttgctaaaaagtcacgggattgaaagagcatatgaaattcctaagttaattaagagagaagctcttgaattgttgag 28504278  T
Q  126 atggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagta 225  Q
     |||||  | || |||||||| ||||| ||||||| || |||   ||||||| || ||||||| |||||||| |||||||||||||||||||||||||||    
T  28504279 gtggaatactttcaaaaataacaaagtcgattcaaattttgacggcattttatactgtgcagtaacttatgcttctggccttccattggctttagaagta 28504378  T
Q  226 gttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaag 325  Q
    || | ||| | ||||||||||||| ||| ||  || || |||||| ||||| ||| |||||||||||||||   |||| || |||    |||||||||||    
T  28504379 gtgggttccaacttgtttggaaagaatatagtagaatgtaaatctgcattatatcagtatgaaaggattcccattaaaaagatccaagcgatacttaaag 28504478  T
Q  326 tgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggatatatattagcagaggttgaagatattctcta 425  Q
    | |||||||||  ||||||  |||||||||| | ||||||||||||||||||||| || ||||  ||||||  |||   |||  |||||||||| ||  |    
T  28504479 taagctttgatgctttggatgaagatgagcagaatgtttttctcgacattgcttgctgcttcaatggatatgaattgaaagaacttgaagatatacttca 28504578  T
Q  426 tgctcattacggtgaatgcatgaaatatcatattagagtgttgatcgagaaatgtctaataaagatttatagacaatgtggttgtacttatgtgacatta 525  Q
    ||||||||| ||| | | |||||| ||||| || || |||||| | || |||| ||| || |||||  |       || |    || |||| | ||||||    
T  28504579 tgctcattatggtaactccatgaagtatcaaatcagtgtgttgcttgaaaaatctctcatcaagatcaaccagttctgggagactagttatcttacatta 28504678  T
Q  526 catgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagacatagtcc 625  Q
    |||| ||| || ||| | || |||||||||||||||||||||||||| | |||||| ||||| ||| | ||||| || ||||| |||||||| ||| | |    
T  28504679 catgccttaatggagcaaataggtaaagaaattgttcgacaagaatccctaaaagaacctggaaaatgtagtaggttgtggtttcataaagatataattc 28504778  T
Q  626 aagttttagaagaaa 640  Q
    | || ||||||||||    
T  28504779 atgtcttagaagaaa 28504793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 59 - 642
Target Start/End: Complemental strand, 28296824 - 28296241
Alignment:
Q  59 gtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaaatggaaggcatttaaaaataataaagttgattc 158  Q
    ||||||||||||| ||| | |||||| || ||  ||||||| |  |||||||||| || ||| ||| |||||| || || |||||||| ||||| ||| |    
T  28296824 gtcatgggattgaaagagcatatgaaatacataagttaaatgacaaagaagctcttgaattgttgagatggaatgctttcaaaaataacaaagtcgatac 28296725  T
Q  159 aagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaagcata-aaga 257  Q
    || || |||  |||||||| |||  || || |||||||| ||||||||||||||||||||||||||||| | ||| | ||||||||||||| ||| ||||    
T  28296724 aaattttgacgacattttacaccaggctgtaacttatgcttctggccttccattggctttagaagtagtgggttccaacttgtttggaaagaatataaga 28296625  T
Q  258 tgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaa 357  Q
     || ||||||||| |||||  || |||||||||||  ||   || | || |||   ||||||||||||| |||||||||  ||||||| |||||||| ||    
T  28296624 -gaatggaaatctgcattaagtcagtatgaaaggagacccattagaaagatccaagagatacttaaagtaagctttgatgctttggaggaagatgagaaa 28296526  T
Q  358 agtgtttttctcgacattgcttgttgtttcagaggatatatattagcagaggttgaagatattctctatgctcattacggtgaatgcatgaaatatcata 457  Q
    | ||||||||| ||||| ||||| || |||| |||||||  |||   |||  ||||| |||| ||  |||||||||| ||| | |||||||| ||||| |    
T  28296525 aatgtttttcttgacatcgcttgctgcttcaaaggatatgaattgaaagaacttgaaaatatacttcatgctcattatggtaactgcatgaattatcaaa 28296426  T
Q  458 ttagagtgttgatcgagaaatgtctaataaagattta-tagacaatgtggttgtacttatgtgacattacatgacttgatagaggagatgggtaaagaaa 556  Q
    | |||||||||   || |||| ||| |||||||| || | |    || ||   || |  |||||||||||||| |||||||||| | |||||||||||||    
T  28296425 tcagagtgttgcatgacaaatctctcataaagatctactggtacctggggaatta-tgttgtgacattacatgccttgatagagaaaatgggtaaagaaa 28296327  T
Q  557 ttgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagacatagtccaagttttagaagaaaat 642  Q
    |||| |   || |||| ||||||||||| || | ||| ||||| || |||||||||||||||||| | || || ||||||||||||    
T  28296326 ttgtgcatgaaaaatctccaaaagagccaggaagacgtagtaggttgtggttccataaagacataattcatgtcttagaagaaaat 28296241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 59 - 642
Target Start/End: Original strand, 28515249 - 28515832
Alignment:
Q  59 gtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaaatggaaggcatttaaaaataataaagttgattc 158  Q
    ||||||||||||| ||| | |||||| || ||  ||||||| |  |||||||||| || ||| ||| |||||| || || |||||||| ||||| ||| |    
T  28515249 gtcatgggattgaaagagcatatgaaatacataagttaaatgacaaagaagctcttgaattgttgagatggaatgctttcaaaaataacaaagtcgatac 28515348  T
Q  159 aagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaagcata-aaga 257  Q
    || || |||  |||||||| |||  || || |||||||| ||||||||||||||||||||||||||||| | ||| | ||||||||||||| ||| ||||    
T  28515349 aaattttgacgacattttacaccaggctgtaacttatgcttctggccttccattggctttagaagtagtgggttccaacttgtttggaaagaatataaga 28515448  T
Q  258 tgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaa 357  Q
     || ||||||||| |||||  || |||||||||||  ||   || | || |||   ||||||||||||| |||||||||  ||||||| |||||||| ||    
T  28515449 -gaatggaaatctgcattaagtcagtatgaaaggagacccattagaaagatccaagagatacttaaagtaagctttgatgctttggaggaagatgagaaa 28515547  T
Q  358 agtgtttttctcgacattgcttgttgtttcagaggatatatattagcagaggttgaagatattctctatgctcattacggtgaatgcatgaaatatcata 457  Q
    | ||||||||| ||||| ||||| || |||| |||||||  |||   |||  ||||| |||| ||  |||||||||| ||| | |||||||| ||||| |    
T  28515548 aatgtttttcttgacatcgcttgctgcttcaaaggatatgaattgaaagaacttgaaaatatacttcatgctcattatggtaactgcatgaattatcaaa 28515647  T
Q  458 ttagagtgttgatcgagaaatgtctaataaagattta-tagacaatgtggttgtacttatgtgacattacatgacttgatagaggagatgggtaaagaaa 556  Q
    | |||||||||   || |||| ||| |||||||| || | |    || ||   || |  |||||||||||||| |||||||||| | |||||||||||||    
T  28515648 tcagagtgttgcatgacaaatctctcataaagatctactggtacctggggaatta-tgttgtgacattacatgccttgatagagaaaatgggtaaagaaa 28515746  T
Q  557 ttgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagacatagtccaagttttagaagaaaat 642  Q
    |||| |   || |||| ||||||||||| || | ||| ||||| || |||||||||||||||||| | || || ||||||||||||    
T  28515747 ttgtgcatgaaaaatctccaaaagagccaggaagacgtagtaggttgtggttccataaagacataattcatgtcttagaagaaaat 28515832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 26 - 655
Target Start/End: Original strand, 2185891 - 2186508
Alignment:
Q  26 tcgttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaa 125  Q
    ||||||| || ||||| ||||||||| ||||| || ||||| |||| | ||| |||||| |  ||||||||||| || |||| || || || ||| |||     
T  2185891 tcgttaccacccgagataaacatttgttagcaagttatggggttgaaaaaacatatgaagtgaatgggttaaatgagaaagatgcacttgacttgttgag 2185990  T
Q  126 atggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagta 225  Q
     |||||||  | ||||| ||| ||| ||| ||| |||||||||  ||||||| | | ||||   |  ||| |||||||||||||||| ||||||||||||    
T  2185991 gtggaaggtttgtaaaagtaacaaaattggttccagttatgagggcattttagaacatgcatcaagatattcctctggccttccattagctttagaagta 2186090  T
Q  226 gttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaag 325  Q
    || | ||||  ||||| |||||||  |||||| || ||||  |||||||| | ||| |||||||||| |  || |||| |  |||   ||||||||||||    
T  2186091 gtgggttctgacttgtctggaaagtctaaagacgaatggagttctacattggctcgatatgaaaggactgttcctaaaaacatccaacagatacttaaag 2186190  T
Q  326 tgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggatatatattagcagaggttgaagatattctcta 425  Q
    | |||||||||  |||| || | || ||  | ||| | ||||||||||||||||||| ||||| ||||| || | | | |||| |  ||||||| ||  |    
T  2186191 tcagctttgatgctttgcaggaggaagataagagtctctttctcgacattgcttgttttttcaaaggatgtagactggaagagttccaagatatacttga 2186290  T
Q  426 tgctcattacggtgaatgcatgaaatatcatattagagtgttgatcgagaaatgtctaataaagatttatagacaatgtggttgtacttatgtgacatta 525  Q
    |||||||||   | | ||||| ||| |||||||| |||||||| | || ||||  || ||||||||| || |     | ||||||      |||||||||    
T  2186291 tgctcattatacttattgcatcaaaaatcatattggagtgttggttgaaaaatcactcataaagatt-attg-----ggggttgt------gtgacatta 2186378  T
Q  526 catgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagacatagtcc 625  Q
    ||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||| ||||| ||||| || |||| |||| |||| ||||| |    
T  2186379 catgacttgatagaggaaatgggtaaagaaatcgtacgacaagaatcaccaaaagagcctggaaaacgtagtaggttgtggtcccatgaagatatagttc 2186478  T
Q  626 aagttttagaagaaaatttggtgagtaaga 655  Q
      |||||| | | ||||| |||||||||||    
T  2186479 ctgttttacatgcaaattcggtgagtaaga 2186508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 29 - 383
Target Start/End: Original strand, 28240422 - 28240775
Alignment:
Q  29 ttacaactcgagacaaacatttgctagcatg---tcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaa 125  Q
    |||| ||||||||||||| ||||||| ||||   |||  || |||| | ||| |||||| | ||| ||||||||  || ||||||||| || ||  |||     
T  28240422 ttaccactcgagacaaacgtttgctaacatgcagtcacagggttgaaacaacctatgaagtggattggttaaatgtggcagaagctcttgaattattgac 28240521  T
Q  126 atggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagta 225  Q
     |||||||||||||||| ||| | |||  ||||||||||  || ||||| ||    ||||| | |||||||| |||||||| ||||| ||||||||||||    
T  28240522 gtggaaggcatttaaaagtaacagagtccattcaagttacaagtacattctaccatgtgcaataacttatgcttctggcctaccattagctttagaagta 28240621  T
Q  226 gttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaag 325  Q
    |||| ||| | ||||||||||    ||| ||  || ||| |||| |||||||| | |||||||||||||||  |||||||| |||  |||||||||||||    
T  28240622 gttggttccaacttgtttggattagatataggagaatgggaatccacattagaccagtatgaaaggattccaaataaagagatccaaaagatacttaaag 28240721  T
Q  326 tgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttg 383  Q
    |    ||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  28240722 t----tttgatgctttggagaaagatgagcaaagtgtttttctcgacattgcttgttg 28240775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 172 - 397
Target Start/End: Complemental strand, 27610091 - 27609866
Alignment:
Q  172 attttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatcta 271  Q
    |||||||||||||| ||| | ||||| ||||||||||| || | | ||||| |||| | ||||| ||||||||||||| | | ||| || ||||| | ||    
T  27610091 attttaaaccgtgctgttgcatatgcttctggccttccgttagttatagaaatagtgggttctaacttgtttggaaagaacatagaggaatggaagtata 27609992  T
Q  272 cattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcga 371  Q
    |||||||| ||||||| ||||||||  |||||||| |||  ||||||||||||||||||| ||||  ||||||  |||| ||||||||||| ||||| ||    
T  27609991 cattagatgggtatgacaggattcccaataaagagatccaaaagatacttaaagtgagctatgattctttggaagaagaggagcaaagtgtctttctgga 27609892  T
Q  372 cattgcttgttgtttcagaggatata 397  Q
    |||||||||||| |||| ||||||||    
T  27609891 cattgcttgttgcttcaaaggatata 27609866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 127 - 419
Target Start/End: Complemental strand, 27705270 - 27704978
Alignment:
Q  127 tggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtag 226  Q
    |||| ||| ||||||||| | || |||  |||| |||||||  |||||||||||||||||||| | ||||| ||||||||||| || | ||||||||||     
T  27705270 tggatggcttttaaaaatgacaacgttccttcaggttatgaagacattttaaaccgtgcagttgcatatgcttctggccttccgttagttttagaagtaa 27705171  T
Q  227 ttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagt 326  Q
    | | ||||| ||||||||| ||| | | ||| || |||||   |||||||||| ||||||| ||||||||  |||||||| |||  |||||||||| |||    
T  27705170 tgggttctaacttgtttggcaagaacatagaagaatggaagaatacattagatgggtatgacaggattcccaataaagagatccaaaagatacttagagt 27705071  T
Q  327 gagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggatatatattagcagaggttgaagatat 419  Q
    ||||| ||||  ||||||  |||| ||||| ||||| ||||| |||||||||||||| || | ||| |||| |||  ||||||||||| ||||    
T  27705070 gagctatgatgctttggaagaagaggagcagagtgtctttcttgacattgcttgttgcttaaaagggtatagattgacagaggttgaaaatat 27704978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 105 - 396
Target Start/End: Original strand, 27680094 - 27680385
Alignment:
Q  105 agaagctctagagttgctgaaatggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggc 204  Q
    ||||||||| || ||| |||  |||| ||| ||||||| | ||||||||  |||| |||| ||  |||||||||||||||||||| | ||||| | ||||    
T  27680094 agaagctcttgaattgttgaggtggatggcttttaaaagtgataaagttccttcaggttacgaagacattttaaaccgtgcagttgcatatgcttttggc 27680193  T
Q  205 cttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaag 304  Q
    ||||| || | |||||||||||| | ||||| |||||||||||||   | ||| || |||||   |||||||||| ||||||| ||||||||  ||||||    
T  27680194 cttccgttagttttagaagtagtgggttctaacttgtttggaaagagcatagaagattggaagcatacattagatgggtatgacaggattcccaataaag 27680293  T
Q  305 aggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggatat 396  Q
    || |||  ||||||||||| ||||||| ||||  ||||||  |||| ||||| ||||| ||||| ||||| ||||| || |||| |||||||    
T  27680294 agatccaaaagatacttaaggtgagctatgatgctttggaagaagaggagcagagtgtctttcttgacatcgcttgctgcttcaaaggatat 27680385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 127 - 383
Target Start/End: Original strand, 26624437 - 26624693
Alignment:
Q  127 tggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtag 226  Q
    |||| ||| ||||||| | | ||||||  |||| |||||||  |||||||||||||||||||| | ||||| ||||||||||| || | ||||||| | |    
T  26624437 tggatggcttttaaaagtgacaaagttccttcaggttatgaagacattttaaaccgtgcagttgcatatgcttctggccttccgttagttttagaaattg 26624536  T
Q  227 ttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagt 326  Q
    | | ||| | |||||||||||||   | ||| || ||||| | |||||||||| ||||||| ||||||||  |||||||| |||  ||||||||||||||    
T  26624537 tgggttccaacttgtttggaaagagcatagaagaatggaagtatacattagatgggtatgacaggattcccaataaagagatccaaaagatacttaaagt 26624636  T
Q  327 gagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttg 383  Q
    ||||| ||||  ||||||  |||| ||||| ||||| ||||| || |||||||||||    
T  26624637 gagctatgatgctttggaagaagaggagcagagtgtctttctagatattgcttgttg 26624693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 127 - 383
Target Start/End: Original strand, 26730414 - 26730670
Alignment:
Q  127 tggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtag 226  Q
    |||| ||| ||||||| | | ||||||  |||| |||||||  |||||||||||||||||||| | ||||| ||||||||||| || | ||||||| | |    
T  26730414 tggatggcttttaaaagtgacaaagttccttcaggttatgaagacattttaaaccgtgcagttgcatatgcttctggccttccgttagttttagaaattg 26730513  T
Q  227 ttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagt 326  Q
    | | ||| | |||||||||||||   | ||| || ||||| | |||||||||| ||||||| ||||||||  |||||||| |||  ||||||||||||||    
T  26730514 tgggttccaacttgtttggaaagagcatagaagaatggaagtatacattagatgggtatgacaggattcccaataaagagatccaaaagatacttaaagt 26730613  T
Q  327 gagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttg 383  Q
    ||||| ||||  ||||||  |||| ||||| ||||| ||||| || |||||||||||    
T  26730614 gagctatgatgctttggaagaagaggagcagagtgtctttctagatattgcttgttg 26730670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 29 - 292
Target Start/End: Original strand, 26812596 - 26812859
Alignment:
Q  29 ttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaaatg 128  Q
    |||| |||||||||| |||||||||| |||||||||||||    |||| ||||||  ||||||| |||||| |  |||||||||| || ||| | | |      
T  26812596 ttaccactcgagacagacatttgctatcatgtcatgggataactagaatttatgacttagatggattaaatgacaaagaagctcttgaattgtttataaa 26812695  T
Q  129 gaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagtt 228  Q
    || ||||||||||| ||| | | ||||||||||||||||  |||||||||| || ||||| |  ||| | |||||||||||||| ||| ||||||||||     
T  26812696 gatggcatttaaaagtaacataattgattcaagttatgattacattttaaatcgcgcagtaaaatatacttctggccttccattagctatagaagtagtg 26812795  T
Q  229 gattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaagga 292  Q
    | ||| | |||||||||||||  ||  || |||||| ||||||||||||||  |||||||||||    
T  26812796 ggttccaacttgtttggaaagagtattgaagagtgggaatctacattagataagtatgaaagga 26812859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 29 - 336
Target Start/End: Original strand, 26950811 - 26951118
Alignment:
Q  29 ttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaaatg 128  Q
    |||| ||||| |||||||||||| || |||||||||||||| | | ||  ||||||  |||||| |||||||||||| ||||||| || ||| | | |      
T  26950811 ttaccactcgtgacaaacatttgttatcatgtcatgggattaaaaaaatatatgaagcagatggtttaaataaggaacaagctcttgaattgttaagaat 26950910  T
Q  129 gaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagtt 228  Q
    || ||| ||||||| ||| |||  ||||||||| |||||    |||||||||||||||||||  |||||  ||||||||||||| ||||||||||||||     
T  26950911 gatggcttttaaaagtaacaaaaatgattcaaggtatgatagtattttaaaccgtgcagttaaatatgctgctggccttccattagctttagaagtagtg 26951010  T
Q  229 gattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtga 328  Q
    | ||||| |||||||||||||  || ||  || ||  | |||  |||||||  ||||||||| ||||| ||| ||||  |||  |||||||||||||| |    
T  26951011 ggttctaacttgtttggaaagactatagcagaatgtgagtctttattagataagtatgaaagaattccacatgaagatatccaaaagatacttaaagtaa 26951110  T
Q  329 gctttgat 336  Q
    ||||||||    
T  26951111 gctttgat 26951118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 105 - 388
Target Start/End: Complemental strand, 27426650 - 27426367
Alignment:
Q  105 agaagctctagagttgctgaaatggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggc 204  Q
    ||||||||| || ||| |||  |||| ||| ||||||||| | ||||||  ||||||||||||  | ||||| || |||| |||| ||||||| ||||||    
T  27426650 agaagctcttgaattgttgaggtggatggcttttaaaaatgacaaagttccttcaagttatgaaaagattttgaatcgtgtagttgcttatgcttctggc 27426551  T
Q  205 cttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaag 304  Q
    |||||  | | | ||||| |||| | ||||| ||||||||||||| | | ||| || || ||   |||||||||| ||||||||| ||||||  ||||||    
T  27426550 cttccggtagttatagaaatagtgggttctaacttgtttggaaagaacatagaagaatgcaagaatacattagattggtatgaaaagattcccaataaag 27426451  T
Q  305 aggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttca 388  Q
    || |||  |  |||||||||||||||| ||||  ||||||| |||| ||||||||||| ||||| |||||||||||||| ||||    
T  27426450 agatccaaagaatacttaaagtgagctatgattctttggaggaagaggagcaaagtgtctttctagacattgcttgttgcttca 27426367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 513 - 643
Target Start/End: Original strand, 28150724 - 28150854
Alignment:
Q  513 ttatgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccat 612  Q
    |||||| |||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||| || |  || || |||||| ||    
T  28150724 ttatgtaacattacatgacttgatagaagacatgggtaaagaaattgtacgacaagaatcaccaaaagagcctgggaagcgcaacaggttgtggttctat 28150823  T
Q  613 aaagacatagtccaagttttagaagaaaatt 643  Q
     |||| ||| | ||||||||||||| |||||    
T  28150824 gaagatatatttcaagttttagaaggaaatt 28150854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 517 - 653
Target Start/End: Original strand, 29469759 - 29469895
Alignment:
Q  517 gtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaag 616  Q
    |||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||||  |||| ||||| ||||| ||||| ||||||| |  |||||    
T  29469759 gtgacattacatgatttgatagaggatatggggaaagaaattgttagacaagaatcacctgaagatcctggaaaacgcagtaggttatggtcctctaaag 29469858  T
Q  617 acatagtccaagttttagaagaaaatttggtgagtaa 653  Q
    | ||| | ||||||||||||||||||  |||||||||    
T  29469859 atataattcaagttttagaagaaaatacggtgagtaa 29469895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 172 - 393
Target Start/End: Complemental strand, 27697557 - 27697336
Alignment:
Q  172 attttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatcta 271  Q
    |||||||  ||||||||| | ||||  ||||||||||| || | | ||||| |||| | ||||| ||||||||||||| | | ||| || ||||| | ||    
T  27697557 attttaagtcgtgcagtttcatatgtttctggccttccgttagttatagaaatagtgggttctaacttgtttggaaagaacatagaagaatggaagtata 27697458  T
Q  272 cattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcga 371  Q
     ||||||| ||||||| ||||||||  |||||||| |||  |||||||||| |||||||| ||||  ||||||  |||| ||||||||||| ||||| ||    
T  27697457 tattagatgggtatgacaggattcccaataaagagatccaaaagatacttagagtgagctatgatgctttggaagaagaggagcaaagtgtctttctgga 27697358  T
Q  372 cattgcttgttgtttcagagga 393  Q
    |||||||||||| |||| ||||    
T  27697357 cattgcttgttgcttcaaagga 27697336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 105 - 394
Target Start/End: Original strand, 28787382 - 28787671
Alignment:
Q  105 agaagctctagagttgctgaaatggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggc 204  Q
    ||||||||| |||||| ||| ||||| ||| ||||| ||||| |||||   ||||||||||||  || ||||||| ||||||||| ||||||| || |||    
T  28787382 agaagctcttgagttgttgagatggatggcttttaagaataacaaagtaccttcaagttatgaagacgttttaaatcgtgcagtttcttatgcttcgggc 28787481  T
Q  205 cttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaag 304  Q
    ||||| || | ||||||| |||| | ||| | |||||||||||||   | ||| || |||||   ||| |||||| | ||||||| ||||||  |||||     
T  28787482 cttcccttagttttagaaatagtgggttccaacttgtttggaaagacgatagaagaatggaagggtactttagatggatatgaaaagattcccaataaaa 28787581  T
Q  305 aggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggat 394  Q
    || |||   ||||||||||||| |||| ||||  ||||||| ||||  | |||||||||||||| |||||||| ||||| |||| |||||    
T  28787582 agatccacgagatacttaaagtaagctatgatgctttggaggaagagcaacaaagtgtttttctagacattgcatgttgcttcaaaggat 28787671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 172 - 388
Target Start/End: Complemental strand, 27717470 - 27717254
Alignment:
Q  172 attttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatcta 271  Q
    |||||||||||||||||| | ||||| ||||||||||| || | | ||||| |||| | ||||| ||| | ||||||| | | ||| || |||||   ||    
T  27717470 attttaaaccgtgcagttgcatatgcttctggccttccgttagttatagaaatagtgggttctaacttatctggaaagaacatagaggaatggaagaata 27717371  T
Q  272 cattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcga 371  Q
    |||||||| ||||||| ||||||||  |||||||| |||  |||||||||||||| || | ||||  ||||||| ||||  |||||||||| ||||| ||    
T  27717370 cattagatgggtatgacaggattcccaataaagagatccaaaagatacttaaagtaagttatgatgctttggaggaagagcagcaaagtgtctttctaga 27717271  T
Q  372 cattgcttgttgtttca 388  Q
    |||||||||||| ||||    
T  27717270 cattgcttgttgcttca 27717254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 170 - 394
Target Start/End: Original strand, 31285768 - 31285992
Alignment:
Q  170 acattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatc 269  Q
    |||||||||||||||||||| | ||| | |||||||||||||| | | |||||||||| | ||| | |||||||||||||   | |||  | |||||       
T  31285768 acattttaaaccgtgcagttgcatattcttctggccttccattagttatagaagtagtgggttcaaacttgtttggaaagagcatagaaaaatggaagag 31285867  T
Q  270 tacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctc 369  Q
    |||||||||| ||||||| | ||||||  |||||||| |||  |||||||||||||| |||| ||||  ||||||  |||| ||||| ||||| |||||     
T  31285868 tacattagatgggtatgacaagattcccaataaagagatccaaaagatacttaaagtaagctatgatgctttggaagaagaggagcagagtgtctttctg 31285967  T
Q  370 gacattgcttgttgtttcagaggat 394  Q
    |||||||||||||| |||| |||||    
T  31285968 gacattgcttgttgcttcaaaggat 31285992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 105 - 383
Target Start/End: Complemental strand, 27676658 - 27676380
Alignment:
Q  105 agaagctctagagttgctgaaatggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggc 204  Q
    ||||||||| || ||| |||  |||||||| ||||||||| | ||||||  ||||||||||||  |||||||||| |||||||||   ||||| ||||||    
T  27676658 agaagctcttgaattgttgaggtggaaggcttttaaaaatgagaaagttccttcaagttatgaagacattttaaagcgtgcagttgtatatgcttctggc 27676559  T
Q  205 cttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaag 304  Q
    |||||||| ||  |||||||||| | ||||| |||||||||||||  ||  |  || ||  | ||||||||||||  ||||| ||| ||||| |||||||    
T  27676558 cttccattagcgatagaagtagtgggttctaacttgtttggaaagagtattgcagaatgtgagtctacattagataagtatggaagaattccacataaag 27676459  T
Q  305 aggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttg 383  Q
    |  |||  |||||||||| | |||||| ||||  ||||||  |||| ||||| ||||| ||| | || |||||||||||    
T  27676458 atatccaaaagatacttagactgagctatgatgctttggacgaagaggagcagagtgtctttttggatattgcttgttg 27676380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 105 - 394
Target Start/End: Original strand, 28793503 - 28793792
Alignment:
Q  105 agaagctctagagttgctgaaatggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggc 204  Q
    ||||||||| |||||| ||| ||||| ||| ||||| ||||| |||||   ||||||||||||  || ||||||| ||||||||| | ||||| || |||    
T  28793503 agaagctcttgagttgttgagatggatggcttttaagaataacaaagtaccttcaagttatgaagacgttttaaatcgtgcagtttcgtatgcttcgggc 28793602  T
Q  205 cttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaag 304  Q
    ||||| || | ||||||| |||| | ||| | |||||||||||||   | ||| || |||||   ||| |||||| | ||||||| ||||||  |||||     
T  28793603 cttcccttagttttagaaatagtgggttccaacttgtttggaaagacgatagaagaatggaagggtactttagatggatatgaaaagattcccaataaaa 28793702  T
Q  305 aggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggat 394  Q
    || |||   ||||||||||||| |||| ||||  ||||||| ||||  | |||||||||||||| |||||||| ||||| |||| |||||    
T  28793703 agatccacgagatacttaaagtaagctatgatgctttggaggaagagcaacaaagtgtttttctagacattgcatgttgcttcaaaggat 28793792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 89 - 249
Target Start/End: Original strand, 26636774 - 26636934
Alignment:
Q  89 atgggttaaataaggaagaagctctagagttgctgaaatggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagt 188  Q
    |||| |||||||||||| ||||||| || ||| | | |   ||||| ||||||| ||| |||  ||||||||| |||||  |||||||||||||||||||    
T  26636774 atggtttaaataaggaacaagctcttgaattgttaagaacaaaggcttttaaaagtaagaaaaatgattcaagctatgattacattttaaaccgtgcagt 26636873  T
Q  189 tacttatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaag 249  Q
    ||  ||||| |||||||||||||| |||||||||||||| | ||| | |||||||||||||    
T  26636874 taaatatgcttctggccttccattagctttagaagtagtgggttccaacttgtttggaaag 26636934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 89 - 249
Target Start/End: Original strand, 26742740 - 26742900
Alignment:
Q  89 atgggttaaataaggaagaagctctagagttgctgaaatggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagt 188  Q
    |||| |||||||||||| ||||||| || ||| | | |   ||||| ||||||| ||| |||  ||||||||| |||||  |||||||||||||||||||    
T  26742740 atggtttaaataaggaacaagctcttgaattgttaagaacaaaggcttttaaaagtaagaaaaatgattcaagctatgattacattttaaaccgtgcagt 26742839  T
Q  189 tacttatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaag 249  Q
    ||  ||||| |||||||||||||| |||||||||||||| | ||| | |||||||||||||    
T  26742840 taaatatgcttctggccttccattagctttagaagtagtgggttccaacttgtttggaaag 26742900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 105 - 383
Target Start/End: Complemental strand, 27592059 - 27591781
Alignment:
Q  105 agaagctctagagttgctgaaatggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggc 204  Q
    ||||||||| || ||| |||  |||||||| ||||||||| | ||||||  ||||||||||||  |||||||||| |||||||||   ||||| ||||||    
T  27592059 agaagctcttgaattgttgaggtggaaggcttttaaaaatgagaaagttccttcaagttatgaagacattttaaagcgtgcagttgtatatgcttctggc 27591960  T
Q  205 cttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaag 304  Q
    |||||||| ||  |||||||||| | ||||| |||||||||||||  ||  |  || ||  | ||||||||||||  ||||| ||| ||||| |||||||    
T  27591959 cttccattagcgatagaagtagtgggttctaacttgtttggaaagagtattgcagaatgtgagtctacattagataagtatggaagaattccacataaag 27591860  T
Q  305 aggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttg 383  Q
    |  |||  |||||||||| | | |||| ||||  ||||||  |||| ||||| ||||| ||| | || |||||||||||    
T  27591859 atatccaaaagatacttagactcagctatgatgctttggaagaagaggagcagagtgtctttttggatattgcttgttg 27591781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 518 - 607
Target Start/End: Original strand, 26624816 - 26624905
Alignment:
Q  518 tgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggt 607  Q
    |||| |||||||||||||||||||| |||||||||| ||| || |||||||||||||| |||||||||||  |||| |||||||||||||    
T  26624816 tgaccttacatgacttgatagaggacatgggtaaagcaatcgtccgacaagaatcacctaaagagcctggagaacgaagtagattatggt 26624905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 518 - 607
Target Start/End: Original strand, 26730793 - 26730882
Alignment:
Q  518 tgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggt 607  Q
    |||| |||||||||||||||||||| |||||||||| ||| || |||||||||||||| |||||||||||  |||| |||||||||||||    
T  26730793 tgaccttacatgacttgatagaggacatgggtaaagcaatcgtccgacaagaatcacctaaagagcctggagaacgaagtagattatggt 26730882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 28 - 468
Target Start/End: Original strand, 26938096 - 26938536
Alignment:
Q  28 gttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaaat 127  Q
    ||||| ||||||||||||||||||||| |||||||||||||||| ||||  |||| | ||||||| |||||  ||||||||||||| ||  |  | |  |    
T  26938096 gttaccactcgagacaaacatttgctatcatgtcatgggattgaaagaatatatgtagtagatggcttaaaggaggaagaagctcttgaactatttaggt 26938195  T
Q  128 ggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagt 227  Q
    ||| ||| || ||||  || ||| ||||  |||||||  |  | ||  ||||||||||| |||  || || |||||||||||||| ||||||||||| ||    
T  26938196 ggatggctttcaaaagcaacaaaattgaaccaagttagtatgatataataaaccgtgcaattaaatacgcttctggccttccattagctttagaagttgt 26938295  T
Q  228 tgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtg 327  Q
     | |||    ||||||||||||  || ||  || ||| |||||||||||| |  ||||||||||||||| ||   | | || |  |||||||||| |||     
T  26938296 aggttcccatttgtttggaaagtgtatagcagaatgggaatctacattagctaagtatgaaaggattccacacggacatgttcaaaagatacttagagta 26938395  T
Q  328 agctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggatatatattagcagaggttgaagatattctctatg 427  Q
    ||||||||| |||||||  |||| || |||||||| ||||| || ||| | ||||| ||||  || | || ||| || |||||||||||||  ||  |||    
T  26938396 agctttgattgtttggatgaagaagaacaaagtgtctttctggatattacgtgttgcttcaatgggtgtagattggctgaggttgaagataaacttcatg 26938495  T
Q  428 ctcattacggtgaatgcatgaaatatcatattagagtgttg 468  Q
    ||||||| ||| | ||||| ||| ||||| || ||||||||    
T  26938496 ctcattatggtcattgcataaaaaatcatgttggagtgttg 26938536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 89 - 245
Target Start/End: Original strand, 26960253 - 26960409
Alignment:
Q  89 atgggttaaataaggaagaagctctagagttgctgaaatggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagt 188  Q
    |||| |||||||||||| ||||||| || ||| | | |   ||||| ||||||| ||| |||  ||||||||| |||||  |||||||||||||||||||    
T  26960253 atggtttaaataaggaacaagctcttgaattgttaagaacaaaggcttttaaaagtaagaaaaatgattcaagctatgattacattttaaaccgtgcagt 26960352  T
Q  189 tacttatgcctctggccttccattggctttagaagtagttgattctagcttgtttgg 245  Q
    ||  ||||| |||||||||||||| |||||||||||||| | ||| | |||||||||    
T  26960353 taaatatgcttctggccttccattagctttagaagtagtgggttccaacttgtttgg 26960409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 515 - 642
Target Start/End: Complemental strand, 29759083 - 29758956
Alignment:
Q  515 atgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataa 614  Q
    |||||||||| ||||| ||| ||||||| |||||||||||||||||| |||||||||| ||  |||| ||||| ||||| | ||||||||||||   |||    
T  29759083 atgtgacattgcatgatttggtagaggatatgggtaaagaaattgttagacaagaatcgcctcaagatcctggaaaacgcactagattatggttttctaa 29758984  T
Q  615 agacatagtccaagttttagaagaaaat 642  Q
     || ||| | ||||||||||||||||||    
T  29758983 tgatataatgcaagttttagaagaaaat 29758956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 29 - 247
Target Start/End: Original strand, 25074935 - 25075153
Alignment:
Q  29 ttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaaatg 128  Q
    |||| |||||||||||||||||| || ||| ||||||||||   | ||  || |||  | |||| |||||||||||| ||||||| || ||| | | |      
T  25074935 ttaccactcgagacaaacatttgttatcatctcatgggattacaaaaatatacgaagcatatggtttaaataaggaacaagctcttgaattgttaagaac 25075034  T
Q  129 gaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagtt 228  Q
     ||||| ||||||| ||| |||  ||||||||| |||||  ||||||||||||||||| |||  ||||| |||||||||||||| ||||||||||| ||     
T  25075035 aaaggcttttaaaagtaaaaaaaatgattcaagctatgattacattttaaaccgtgcaattaaatatgcttctggccttccattagctttagaagttgtg 25075134  T
Q  229 gattctagcttgtttggaa 247  Q
    | ||| | |||||||||||    
T  25075135 ggttccaacttgtttggaa 25075153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 105 - 394
Target Start/End: Original strand, 26803590 - 26803879
Alignment:
Q  105 agaagctctagagttgctgaaatggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggc 204  Q
    ||||||||| || ||| |||  |||| ||| ||||||||||| |||||   ||||||||||||  |||||||||| ||||||||| | ||||| || ||     
T  26803590 agaagctcttgaattgttgaggtggatggcttttaaaaataacaaagtaccttcaagttatgaagacattttaaatcgtgcagtttcatatgcttcaggt 26803689  T
Q  205 cttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaag 304  Q
    ||||| || | ||||||  |||| | ||| | |||||||||||||   | | | || |||||   |||||||||| | ||||||| ||||||  |||||     
T  26803690 cttcccttagttttagagatagtgggttccaacttgtttggaaagagcataaaagaatggaagggtacattagatggatatgaaaagattcccaataaaa 26803789  T
Q  305 aggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggat 394  Q
    || |||   ||||||||||||| |||| ||||  ||||||| ||||  |||| ||||| ||||| |||||||||||||| |||| |||||    
T  26803790 agatccacgagatacttaaagtaagctatgatgctttggaggaagagcagcagagtgtctttctagacattgcttgttgcttcaaaggat 26803879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 516 - 641
Target Start/End: Original strand, 26863123 - 26863248
Alignment:
Q  516 tgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaa 615  Q
    ||||| ||||||||||||||||||||| ||||| |||||||| || ||||||||||| || |||||||| ||  |||| ||||| |||||||  ||| |     
T  26863123 tgtgagattacatgacttgatagaggacatgggcaaagaaatcgtccgacaagaatctcctaaagagccgggtgaacgaagtaggttatggtgtcatgat 26863222  T
Q  616 gacatagtccaagttttagaagaaaa 641  Q
    || ||| |||| ||||||||||||||    
T  26863223 gatataatccacgttttagaagaaaa 26863248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 607
Target Start/End: Original strand, 26885633 - 26885725
Alignment:
Q  515 atgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggt 607  Q
    |||||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||||   |||||||||||  |||| ||||| |||||||    
T  26885633 atgtgacattacatgacttggtagaggacatgggtaaagaaatcgttcggcaagaatcaagtaaagagcctggagaacgtagtaggttatggt 26885725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 153 - 296
Target Start/End: Original strand, 26849904 - 26850047
Alignment:
Q  153 tgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaagcat 252  Q
    |||| |||| |||||  |||||||||| ||||||||||  ||||| |||||||||||||| |||||||||||||| | ||| | |||||||||||||  |    
T  26849904 tgatgcaagctatgattacattttaaatcgtgcagttaaatatgcttctggccttccattagctttagaagtagtgggttccaacttgtttggaaagagt 26850003  T
Q  253 aaagatgagtggaaatctacattagatcggtatgaaaggattcc 296  Q
    | ||| || ||  | ||||||||||||  ||||||||| |||||    
T  26850004 atagaagaatgcgagtctacattagataagtatgaaagaattcc 26850047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 173 - 388
Target Start/End: Original strand, 26862792 - 26863007
Alignment:
Q  173 ttttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatctac 272  Q
    ||||||||||||||||| | ||||| || |||||||| || | | | ||| |||| | ||||| |||||||||||||   |  || || ||| |||  ||    
T  26862792 ttttaaaccgtgcagttgcatatgcttccggccttccgttagttctcgaaatagtgggttctaacttgtttggaaagagcatggaagaatggcaatgcac 26862891  T
Q  273 attagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcgac 372  Q
    ||||||| ||||||||| ||||||  |||||||| |||  | |||||||||||| |||| ||||  ||||||  ||||  |||||||||| ||||| ||     
T  26862892 attagatgggtatgaaaagattcccaataaagagatccaaaggatacttaaagtaagctatgatgctttggaagaagagcagcaaagtgtctttctagat 26862991  T
Q  373 attgcttgttgtttca 388  Q
    ||||||||||||||||    
T  26862992 attgcttgttgtttca 26863007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 516 - 599
Target Start/End: Original strand, 26960677 - 26960760
Alignment:
Q  516 tgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtag 599  Q
    ||||||||||||||||||||||||||| |||||||  |||||||||||||| ||||||   ||||||||||| ||||| |||||    
T  26960677 tgtgacattacatgacttgatagaggatatgggtatggaaattgttcgacaggaatcaattaaagagcctggaaaacgcagtag 26960760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 513 - 608
Target Start/End: Complemental strand, 27529940 - 27529845
Alignment:
Q  513 ttatgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggtt 608  Q
    |||||||||||||||||||||||||||||| |||||||||||| | || ||||||||||||||  | ||||||||  |||| ||||| || |||||    
T  27529940 ttatgtgacattacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatcacccgatgagcctggagaacgcagtaggttgtggtt 27529845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 515 - 606
Target Start/End: Original strand, 27680513 - 27680604
Alignment:
Q  515 atgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatgg 606  Q
    |||||| |||||||||||||||| |||| |||||||||||| | || |||||||||||||| |||||||||||  |||| ||||| ||||||    
T  27680513 atgtgagattacatgacttgataaaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaacgaagtaggttatgg 27680604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 516 - 587
Target Start/End: Complemental strand, 27697219 - 27697148
Alignment:
Q  516 tgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgg 587  Q
    ||||||||||||||||||||||||||| |||||||||||| | || |||||||||||| | |||||||||||    
T  27697219 tgtgacattacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatcaactaaagagcctgg 27697148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 515 - 642
Target Start/End: Complemental strand, 29673646 - 29673519
Alignment:
Q  515 atgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataa 614  Q
    |||||||||||||||| ||| ||||||| ||||| |||||||||||| |||||||| ||||  |||| ||||| ||||| ||||| ||||||||     |    
T  29673646 atgtgacattacatgatttggtagaggatatgggaaaagaaattgttagacaagaagcacctgaagatcctggaaaacgtagtaggttatggttttccga 29673547  T
Q  615 agacatagtccaagttttagaagaaaat 642  Q
    ||| ||| | ||||||||||||||||||    
T  29673546 agatataattcaagttttagaagaaaat 29673519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 517 - 587
Target Start/End: Original strand, 26850277 - 26850347
Alignment:
Q  517 gtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgg 587  Q
    |||||||||||||||||||||||||| |||||||||||||| || ||||||||||||   |||||||||||    
T  26850277 gtgacattacatgacttgatagaggacatgggtaaagaaatcgtccgacaagaatcaattaaagagcctgg 26850347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 270 - 388
Target Start/End: Complemental strand, 27530177 - 27530059
Alignment:
Q  270 tacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctc 369  Q
    |||||||||| ||||||||   |||||  |||||||| |||  |  |||||||||||||||| ||||  |||||||||||| ||||||||||| |||||     
T  27530177 tacattagatgggtatgaagaaattcccaataaagagatccaaagaatacttaaagtgagctatgattctttggagaaagaagagcaaagtgtctttcta 27530078  T
Q  370 gacattgcttgttgtttca 388  Q
    |||||||||||||| ||||    
T  27530077 gacattgcttgttgcttca 27530059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 511 - 572
Target Start/End: Original strand, 25484603 - 25484664
Alignment:
Q  511 acttatgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatc 572  Q
    ||||||||||| |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  25484603 acttatgtgaccttacatgacttgatagaggacatgggtaaagaagtcgttcgacaagaatc 25484664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 511 - 572
Target Start/End: Original strand, 26144412 - 26144473
Alignment:
Q  511 acttatgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatc 572  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||| || |||||||||||    
T  26144412 acttatgtgaccttacatgacttgatagaggacatgggtaaagaaatcgtccgacaagaatc 26144473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 158 - 394
Target Start/End: Original strand, 26647676 - 26647912
Alignment:
Q  158 caagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaagcataaaga 257  Q
    ||||||||||  || ||||||||||||||||| | ||||| || |||||||| || | ||||||| |||| | ||| | ||| | |||||||   | |||    
T  26647676 caagttatgaagacgttttaaaccgtgcagtttcatatgcttcaggccttcccttagttttagaaatagtgggttccaacttatatggaaagagcataga 26647775  T
Q  258 tgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaa 357  Q
     || |||||   |||||||||| | ||||||| ||||||  ||||| || |||   ||||||||||||| |||| ||||  ||||||| ||||  ||||     
T  26647776 agaatggaagggtacattagatggatatgaaaagattcccaataaaaagatccacgagatacttaaagtaagctatgatgctttggaggaagagcagcag 26647875  T
Q  358 agtgtttttctcgacattgcttgttgtttcagaggat 394  Q
    ||||| ||||| |||||||||||||| |||| |||||    
T  26647876 agtgtctttctagacattgcttgttgcttcaaaggat 26647912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 158 - 394
Target Start/End: Original strand, 26753644 - 26753880
Alignment:
Q  158 caagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaagcataaaga 257  Q
    ||||||||||  || ||||||||||||||||| | ||||| || |||||||| || | ||||||| |||| | ||| | ||| | |||||||   | |||    
T  26753644 caagttatgaagacgttttaaaccgtgcagtttcatatgcttcaggccttcccttagttttagaaatagtgggttccaacttatatggaaagagcataga 26753743  T
Q  258 tgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaa 357  Q
     || |||||   |||||||||| | ||||||| ||||||  ||||| || |||   ||||||||||||| |||| ||||  ||||||| ||||  ||||     
T  26753744 agaatggaagggtacattagatggatatgaaaagattcccaataaaaagatccacgagatacttaaagtaagctatgatgctttggaggaagagcagcag 26753843  T
Q  358 agtgtttttctcgacattgcttgttgtttcagaggat 394  Q
    ||||| ||||| |||||||||||||| |||| |||||    
T  26753844 agtgtctttctagacattgcttgttgcttcaaaggat 26753880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 249
Target Start/End: Original strand, 28182186 - 28182406
Alignment:
Q  29 ttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaaatg 128  Q
    |||| ||||||||| |||| ||||||| | ||||||||||||| ||| | |||||| |||||  ||||||| || |||||||||| || ||| |||  ||    
T  28182186 ttaccactcgagacgaacaattgctagtaggtcatgggattgaaagagcatatgaaatagataagttaaatgagaaagaagctcttgaattgttgaggtg 28182285  T
Q  129 gaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagtt 228  Q
    |   || || |||| ||| ||||||||| | | || |||   ||||||| |||  ||||| |||| ||| || | ||||||||||||||||||||||||     
T  28182286 gtctgctttcaaaattaacaaagttgatgcgaattttgacgtcattttacaccaagcagtaacttttgcatcagtccttccattggctttagaagtagtg 28182385  T
Q  229 gattctagcttgtttggaaag 249  Q
    | ||| | |||||||||||||    
T  28182386 ggttccaacttgtttggaaag 28182406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 518 - 653
Target Start/End: Original strand, 28902153 - 28902288
Alignment:
Q  518 tgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaaga 617  Q
    |||||||||||||  ||||||| || ||||| |||||||||||  ||| |||||||||| |  |||||||  |||| |||||||||||||    ||||||    
T  28902153 tgacattacatgatctgatagaagatatgggaaaagaaattgtcagactagaatcaccagatcagcctggagaacgcagtagattatggtctgctaaaga 28902252  T
Q  618 catagtccaagttttagaagaaaatttggtgagtaa 653  Q
    |||||   |||||||||||||||||  |||||||||    
T  28902253 catagctgaagttttagaagaaaatacggtgagtaa 28902288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 517 - 587
Target Start/End: Complemental strand, 27591644 - 27591574
Alignment:
Q  517 gtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgg 587  Q
    |||||||||||||| ||||||||||  |||||||||||| | || |||||||||||||| |||||||||||    
T  27591644 gtgacattacatgaattgatagaggtcatgggtaaagaagtcgtccgacaagaatcacctaaagagcctgg 27591574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 394
Target Start/End: Complemental strand, 27664185 - 27663963
Alignment:
Q  172 attttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatcta 271  Q
    ||||||||||||||||||   ||||| |||||||||||||| |||||| ||||||| | ||| | |||||||||||||  || ||  || ||  | || |    
T  27664185 attttaaaccgtgcagttgaatatgcttctggccttccattagctttaaaagtagtgggttccaacttgtttggaaagagtatagcagattgtgagtcaa 27664086  T
Q  272 cattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcga 371  Q
    | ||||||  ||||||||| ||||| | | ||||  |||  |||||||||||||| |||||||||| ||||||  ||||  | || ||||| ||| | ||    
T  27664085 ccttagataagtatgaaagaattccacctgaagatatccaaaagatacttaaagtaagctttgatactttggaagaagaacaacagagtgtctttttgga 27663986  T
Q  372 cattgcttgttgtttcagaggat 394  Q
     ||||||||||| |||| |||||    
T  27663985 tattgcttgttgcttcaaaggat 27663963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 517 - 587
Target Start/End: Complemental strand, 27676243 - 27676173
Alignment:
Q  517 gtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgg 587  Q
    |||||||||||||| ||||||||||  |||||||||||| | || |||||||||||||| |||||||||||    
T  27676243 gtgacattacatgaattgatagaggtcatgggtaaagaagtggtccgacaagaatcacctaaagagcctgg 27676173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 513 - 587
Target Start/End: Complemental strand, 27704896 - 27704822
Alignment:
Q  513 ttatgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgg 587  Q
    |||||||||||||||| ||||||||||||| |||||||||||| | || ||||||||||||   |||||||||||    
T  27704896 ttatgtgacattacataacttgatagaggatatgggtaaagaagtcgtccgacaagaatcaattaaagagcctgg 27704822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 522 - 584
Target Start/End: Original strand, 31286114 - 31286176
Alignment:
Q  522 attacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcc 584  Q
    ||||||||||||||||||||| |||||||||||| | || |||||||||||||| ||||||||    
T  31286114 attacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcc 31286176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 511 - 572
Target Start/End: Original strand, 25512435 - 25512496
Alignment:
Q  511 acttatgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatc 572  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||  || |||||||||||    
T  25512435 acttatgtgaccttacatgacttgatagaggacatgggtaaagaaaccgtccgacaagaatc 25512496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 517 - 574
Target Start/End: Original strand, 26637193 - 26637250
Alignment:
Q  517 gtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcac 574  Q
    |||||||||||||||||||||||||| ||||||| |||||| || |||||||||||||    
T  26637193 gtgacattacatgacttgatagaggatatgggtatagaaatcgtccgacaagaatcac 26637250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 517 - 574
Target Start/End: Original strand, 26743159 - 26743216
Alignment:
Q  517 gtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcac 574  Q
    |||||||||||||||||||||||||| ||||||| |||||| || |||||||||||||    
T  26743159 gtgacattacatgacttgatagaggatatgggtatagaaatcgtccgacaagaatcac 26743216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 388
Target Start/End: Original strand, 26824985 - 26825246
Alignment:
Q  127 tggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtag 226  Q
    |||| ||| ||||||||||| |||||    ||||||||||| ||||||||||||||||||||| | ||||| || |||||||| || |  |||||| |||    
T  26824985 tggatggcttttaaaaataacaaagtaccgtcaagttatgaacacattttaaaccgtgcagtttcatatgcttcgggccttcccttagtattagaaatag 26825084  T
Q  227 ttgattctagcttgtttggaa--agcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaa 324  Q
    | | ||| |  ||||||||||  |||||| | ||   |||||   | |||||||| | ||||||||||||||| | ||| || |||   ||||||||| |    
T  26825085 tgggttccaatttgtttggaaagagcatacaaat--atggaagggtgcattagatggatatgaaaggattcctgacaaaaagatccaagagatacttaga 26825182  T
Q  325 gtgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttca 388  Q
    || |||| ||||  ||||||  ||||  | ||||||||||| ||||||||||||||||| ||||    
T  26825183 gtaagctatgatgctttggaagaagagcaacaaagtgttttcctcgacattgcttgttgcttca 26825246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 522 - 642
Target Start/End: Original strand, 26938581 - 26938701
Alignment:
Q  522 attacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagacata 621  Q
    ||||||||||||||| ||||| |||||||||||||||||| |||||||||||   |||||| ||||  |||| | |||||| |||||  | ||||| |||    
T  26938581 attacatgacttgattgaggacatgggtaaagaaattgttagacaagaatcagtcaaagaggctggagaacgcactagattgtggtttgacaaagatata 26938680  T
Q  622 gtccaagttttagaagaaaat 642  Q
    || || || ||| ||||||||    
T  26938681 gttcatgtattaaaagaaaat 26938701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 513 - 653
Target Start/End: Original strand, 27215998 - 27216138
Alignment:
Q  513 ttatgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccat 612  Q
    |||| ||| ||||||||||||||||||||| ||||||| |||| |||| ||||||||||||||  |  | |||||| |||| ||||| || ||||| ||     
T  27215998 ttatatgagattacatgacttgatagaggatatgggtagagaagttgtccgacaagaatcacccgacaatcctggggaacgcagtaggttgtggtttcac 27216097  T
Q  613 aaagacatagtccaagttttagaagaaaatttggtgagtaa 653  Q
     | || ||||| |||||| || |||||||| | ||||||||    
T  27216098 gatgatatagttcaagttctaaaagaaaatatcgtgagtaa 27216138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 515 - 587
Target Start/End: Original strand, 28787804 - 28787876
Alignment:
Q  515 atgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgg 587  Q
    |||||| |||||||||||||||||| || |||||||||||| | || ||||||||||| || |||||||||||    
T  28787804 atgtgagattacatgacttgatagaagacatgggtaaagaagtcgtccgacaagaatcgcctaaagagcctgg 28787876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 515 - 587
Target Start/End: Original strand, 28793925 - 28793997
Alignment:
Q  515 atgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgg 587  Q
    |||||| |||||||||||||||||| || |||||||||||| | || ||||||||||| || |||||||||||    
T  28793925 atgtgagattacatgacttgatagaagacatgggtaaagaagtcgtccgacaagaatcgcctaaagagcctgg 28793997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 524 - 655
Target Start/End: Original strand, 26804018 - 26804149
Alignment:
Q  524 tacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagacatagt 623  Q
    |||||||||||||| |||| |||||||||||| | || |||||||||||||| ||||| ||||  ||||| ||||| ||||||   ||| |||| |||||    
T  26804018 tacatgacttgataaaggacatgggtaaagaagtcgtccgacaagaatcacctaaagatcctgaaaaacgaagtaggttatggcgtcatgaagatatagt 26804117  T
Q  624 ccaagttttagaagaaaatttggtgagtaaga 655  Q
     || ||| || |||||||  | ||||||||||    
T  26804118 tcatgttataaaagaaaacattgtgagtaaga 26804149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 160
Target Start/End: Original strand, 28235633 - 28235764
Alignment:
Q  29 ttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaaatg 128  Q
    |||| |||||||||||||| ||||||||| ||||||||||||| ||||| || ||| |||||  ||||||| || | |||||||| || ||| |||  ||    
T  28235633 ttaccactcgagacaaacaattgctagcaagtcatgggattgaaagaacgtacgaaatagataagttaaatgagaacgaagctcttgaattgttgaggtg 28235732  T
Q  129 gaaggcatttaaaaataataaagttgattcaa 160  Q
    |||||| || ||| |||| || || |||||||    
T  28235733 gaaggctttaaaatataacaaggtcgattcaa 28235764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 515 - 606
Target Start/End: Complemental strand, 29695023 - 29694932
Alignment:
Q  515 atgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatgg 606  Q
    |||| ||||||||||| ||||||||||| ||||| |||||||||||| ||| |||||||||  |||| ||||| ||||| | ||| ||||||    
T  29695023 atgtaacattacatgatttgatagaggatatggggaaagaaattgttagacgagaatcacctgaagatcctggaaaacgcactaggttatgg 29694932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 587
Target Start/End: Original strand, 25075432 - 25075502
Alignment:
Q  517 gtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgg 587  Q
    |||||||||||||||||| ||||||| |||||||||||||| || ||||| ||||||   |||||||||||    
T  25075432 gtgacattacatgacttgttagaggacatgggtaaagaaatcgtccgacatgaatcaattaaagagcctgg 25075502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 518 - 572
Target Start/End: Original strand, 25581273 - 25581327
Alignment:
Q  518 tgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatc 572  Q
    |||| |||||||||||||||||||| |||||||||||||| || |||||||||||    
T  25581273 tgaccttacatgacttgatagaggacatgggtaaagaaatcgtccgacaagaatc 25581327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 515 - 633
Target Start/End: Original strand, 26657525 - 26657643
Alignment:
Q  515 atgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataa 614  Q
    ||||| ||||||| || ||||||||||| |||||||||||||| || ||||||||||||   |||||||| ||  |||| ||||| |||||||  || ||    
T  26657525 atgtggcattacacgatttgatagaggacatgggtaaagaaatcgtccgacaagaatcaagtaaagagcccggagaacgtagtaggttatggtgtcacaa 26657624  T
Q  615 agacatagtccaagtttta 633  Q
     |||||||| || ||||||    
T  26657625 tgacatagttcatgtttta 26657643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 515 - 633
Target Start/End: Original strand, 26763496 - 26763614
Alignment:
Q  515 atgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataa 614  Q
    ||||| ||||||| || ||||||||||| |||||||||||||| || ||||||||||||   |||||||| ||  |||| ||||| |||||||  || ||    
T  26763496 atgtggcattacacgatttgatagaggacatgggtaaagaaatcgtccgacaagaatcaagtaaagagcccggagaacgtagtaggttatggtgtcacaa 26763595  T
Q  615 agacatagtccaagtttta 633  Q
     |||||||| || ||||||    
T  26763596 tgacatagttcatgtttta 26763614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 575
Target Start/End: Original strand, 26813102 - 26813160
Alignment:
Q  517 gtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcacc 575  Q
    |||||||||||||||||||||||| | | ||||||||||||||| | ||||||||||||    
T  26813102 gtgacattacatgacttgatagagcacacgggtaaagaaattgtccaacaagaatcacc 26813160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 587
Target Start/End: Complemental strand, 27603324 - 27603254
Alignment:
Q  517 gtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgg 587  Q
    |||||| | ||| ||||||||||||| |||||||||||| | || |||||||||||||| |||||||||||    
T  27603324 gtgacactgcataacttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctgg 27603254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 513 - 587
Target Start/End: Complemental strand, 27609753 - 27609679
Alignment:
Q  513 ttatgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgg 587  Q
    ||||||||  |||||||||||||||||||| |||||||||||| | || ||||||||||||   |||||||||||    
T  27609753 ttatgtgatgttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatcaattaaagagcctgg 27609679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 513 - 587
Target Start/End: Complemental strand, 27717132 - 27717058
Alignment:
Q  513 ttatgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgg 587  Q
    ||||||||  |||||||||||||||||||| |||||||||||| | || ||||||||||||   |||||||||||    
T  27717132 ttatgtgatgttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatcaattaaagagcctgg 27717058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 531 - 609
Target Start/End: Complemental strand, 29476686 - 29476608
Alignment:
Q  531 cttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttc 609  Q
    ||||||||||   ||||||||||||||||||||  | ||||||||| |||| ||||||| ||| |||||||||||||||    
T  29476686 cttgatagagagcatgggtaaagaaattgttcgtgaggaatcaccagaagatcctgggagacgtagtagattatggttc 29476608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 515 - 572
Target Start/End: Original strand, 25546531 - 25546588
Alignment:
Q  515 atgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatc 572  Q
    ||||||| |||||||||||||||||||| |||||||||||| | || |||||||||||    
T  25546531 atgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 25546588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 26057097 - 26057170
Alignment:
Q  136 tttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttcc 209  Q
    ||||||||| | ||||||  ||||||||||||  | ||||||||||||| |||||||||||| |||||||||||    
T  26057097 tttaaaaatgacaaagttccttcaagttatgaagatattttaaaccgtgtagttacttatgcatctggccttcc 26057170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 515 - 572
Target Start/End: Original strand, 26057470 - 26057527
Alignment:
Q  515 atgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatc 572  Q
    ||||||| |||||||||||||||||||| |||||||||||| | || |||||||||||    
T  26057470 atgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 26057527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 26077067 - 26077140
Alignment:
Q  136 tttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttcc 209  Q
    ||||||||| | ||||||  ||||||||||||  | ||||||||||||| |||||||||||| |||||||||||    
T  26077067 tttaaaaatgacaaagttccttcaagttatgaagatattttaaaccgtgtagttacttatgcatctggccttcc 26077140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 515 - 572
Target Start/End: Original strand, 26077440 - 26077497
Alignment:
Q  515 atgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatc 572  Q
    ||||||| |||||||||||||||||||| |||||||||||| | || |||||||||||    
T  26077440 atgtgaccttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatc 26077497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 516 - 573
Target Start/End: Original strand, 26951295 - 26951352
Alignment:
Q  516 tgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatca 573  Q
    ||||||||||||||||||||||||||| ||||||| ||||||  | ||||||||||||    
T  26951295 tgtgacattacatgacttgatagaggatatgggtatagaaatcatccgacaagaatca 26951352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 492
Target Start/End: Original strand, 26885278 - 26885598
Alignment:
Q  172 attttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatcta 271  Q
    |||||||||||||||||| | ||||| || |||||||| || | | ||||| |||| | ||| | |||||||||||||   | |||    |||||   ||    
T  26885278 attttaaaccgtgcagtttcatatgcttcgggccttcctttagttatagaaatagtgggttccaacttgtttggaaagagcatagaaacatggaagagta 26885377  T
Q  272 cattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcga 371  Q
    || ||||| | ||||||| ||||||| ||| | || |||   ||||||||||||| |||| ||||  ||| ||| |||| ||||||||||| ||||| ||    
T  26885378 cactagatggatatgaaaagattcctaatacaaagatccaagagatacttaaagtaagctatgatgctttagaggaagaggagcaaagtgtctttctgga 26885477  T
Q  372 cattgcttgttgtttcagaggatatatattagcagaggttgaagatattctctatgctcattacggtgaatgcatgaaatatcatattagagtgttgatc 471  Q
     || |||||||| |||| ||| | || ||   ||||||| |||||||| ||  |||||||||| ||  | ||||| ||| ||||| || |||||||| ||    
T  26885478 tatagcttgttgcttcaaagggtgtaaatggacagaggtcgaagatatacttcatgctcattatggccattgcataaaacatcatgttggagtgttggtc 26885577  T
Q  472 gagaaatgtctaataaagatt 492  Q
    || |||| |||  ||||||||    
T  26885578 gaaaaatctctcttaaagatt 26885598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 27530291 - 27530235
Alignment:
Q  156 ttcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccatt 212  Q
    ||||||| ||||  ||||||||||||||||| |||||||||| ||||||||||||||    
T  27530291 ttcaagtcatgaagacattttaaaccgtgcacttacttatgcttctggccttccatt 27530235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 513 - 584
Target Start/End: Original strand, 26825374 - 26825445
Alignment:
Q  513 ttatgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcc 584  Q
    ||||||||||||||||||||||||| |||| ||||| |||||| | || |||||| ||||| | ||||||||    
T  26825374 ttatgtgacattacatgacttgataaaggacatgggcaaagaagtagtccgacaacaatcatctaaagagcc 26825445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 520 - 587
Target Start/End: Complemental strand, 27663829 - 27663762
Alignment:
Q  520 acattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgg 587  Q
    ||||||||||||||||||||| | ||||||| |||||| || ||||||||||||   |||||||||||    
T  27663829 acattacatgacttgatagagtatatgggtatagaaatagtccgacaagaatcaattaaagagcctgg 27663762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #91
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 25484234 - 25484304
Alignment:
Q  136 tttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggcct 206  Q
    ||||||||| | ||||||  ||||||||||||  | ||||||||||||| |||||||||||| ||||||||    
T  25484234 tttaaaaatgacaaagttccttcaagttatgaagagattttaaaccgtgtagttacttatgcatctggcct 25484304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #92
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 520 - 574
Target Start/End: Complemental strand, 25491933 - 25491879
Alignment:
Q  520 acattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcac 574  Q
    ||||||||| ||||||||||| | |||||||||||| | ||||||||||||||||    
T  25491933 acattacataacttgatagagcacatgggtaaagaagtcgttcgacaagaatcac 25491879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #93
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 26144043 - 26144113
Alignment:
Q  136 tttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggcct 206  Q
    ||||||||| | ||||||  ||||||||||||  | ||||||||||||| |||||||||||| ||||||||    
T  26144043 tttaaaaatgacaaagttccttcaagttatgaagaaattttaaaccgtgtagttacttatgcatctggcct 26144113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #94
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 513 - 587
Target Start/End: Original strand, 26648019 - 26648093
Alignment:
Q  513 ttatgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgg 587  Q
    |||| ||| |||||||||||||||| |||| |||||||| ||| | || |||||||||||||  |||||||||||    
T  26648019 ttatctgagattacatgacttgataaaggacatgggtaaggaagtagtccgacaagaatcacgtaaagagcctgg 26648093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #95
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 513 - 587
Target Start/End: Original strand, 26753987 - 26754061
Alignment:
Q  513 ttatgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgg 587  Q
    |||| ||| |||||||||||||||| |||| |||||||| ||| | || |||||||||||||  |||||||||||    
T  26753987 ttatctgagattacatgacttgataaaggacatgggtaaggaagtagtccgacaagaatcacgtaaagagcctgg 26754061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #96
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 530 - 608
Target Start/End: Original strand, 29523458 - 29523536
Alignment:
Q  530 acttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggtt 608  Q
    ||||||| ||| | |||| ||||||| ||||||| | ||||||||||| ||||||||||||| | |||||| |||||||    
T  29523458 acttgatcgagaaaatggctaaagaacttgttcgtcgagaatcaccaacagagcctgggaaatgtagtagactatggtt 29523536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #97
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 25512086 - 25512139
Alignment:
Q  156 ttcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttcc 209  Q
    ||||||||||||  | ||||||||||||| |||||||||||| |||||||||||    
T  25512086 ttcaagttatgaagagattttaaaccgtgtagttacttatgcatctggccttcc 25512139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #98
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 573
Target Start/End: Original strand, 26978936 - 26978989
Alignment:
Q  520 acattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatca 573  Q
    ||||||||| ||||||||||||| ||||||| |||||| || ||||||||||||    
T  26978936 acattacattacttgatagaggatatgggtatagaaatcgtccgacaagaatca 26978989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #99
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 518 - 599
Target Start/End: Complemental strand, 28490121 - 28490040
Alignment:
Q  518 tgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtag 599  Q
    |||||||||| || ||| ||||||| ||||| |||||||||||| ||||||| |||||| || | ||||| ||||| |||||    
T  28490121 tgacattacacgatttggtagaggatatggggaaagaaattgttagacaagagtcaccagaaaatcctggaaaacgcagtag 28490040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #100
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 518 - 599
Target Start/End: Complemental strand, 29802531 - 29802450
Alignment:
Q  518 tgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtag 599  Q
    |||||||||| || ||| ||||||| ||||| |||||||||||| ||||||| |||||| || | ||||| ||||| |||||    
T  29802531 tgacattacacgatttggtagaggatatggggaaagaaattgttagacaagagtcaccagaaaatcctggaaaacgcagtag 29802450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #101
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 193 - 249
Target Start/End: Original strand, 26978612 - 26978668
Alignment:
Q  193 tatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaag 249  Q
    ||||| ||||| |||||||| |||||||||||||| | ||| |||||||||||||||    
T  26978612 tatgcttctggtcttccattagctttagaagtagtgggttcaagcttgtttggaaag 26978668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #102
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 28228020 - 28228104
Alignment:
Q  29 ttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctct 113  Q
    |||| |||||| ||||||| ||||||||| ||||||||||||| ||| | |||||| |||||  ||||||| || | ||||||||    
T  28228020 ttaccactcgaaacaaacaattgctagcaagtcatgggattgaaagagcatatgaaatagataagttaaatgagaacgaagctct 28228104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #103
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 29523097 - 29523145
Alignment:
Q  28 gttacaactcgagacaaacatttgctagcatgtcatgggattgagagaa 76  Q
    ||||||||| | ||||||||||||||||||| |||||||||||| ||||    
T  29523097 gttacaacttgcgacaaacatttgctagcatttcatgggattgaaagaa 29523145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #104
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 25492360 - 25492242
Alignment:
Q  102 ggaagaagctctagagttgctgaaatggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctct 201  Q
    |||||||||||| || ||||| |  |||| ||| ||||||||| | | ||||  ||||| ||||||  |||||||||  | |||| |||| ||||| |||    
T  25492360 ggaagaagctcttgaattgcttatgtggatggcttttaaaaatgacagagttccttcaatttatgaagacattttaacacttgcaattacctatgcttct 25492261  T
Q  202 ggccttccattggctttag 220  Q
    ||||||||||| |||||||    
T  25492260 ggccttccattagctttag 25492242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #105
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 25539718 - 25539788
Alignment:
Q  136 tttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggcct 206  Q
    ||||||||| | ||||||  ||| ||||||||  | ||||||||||||| |||||||||||| ||||||||    
T  25539718 tttaaaaatgacaaagttccttcgagttatgaagagattttaaaccgtgtagttacttatgcatctggcct 25539788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #106
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 173 - 419
Target Start/End: Complemental strand, 27603674 - 27603428
Alignment:
Q  173 ttttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatctac 272  Q
    ||||||||||||||||| | ||||| || || ||||| || | ||| |||||||| | ||| | |||||||||||||   | ||| || |||||   |||    
T  27603674 ttttaaaccgtgcagtttcatatgcttcaggacttcccttagttttggaagtagtgggttccaacttgtttggaaagaggatagaagaatggaagggtac 27603575  T
Q  273 attagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcgac 372  Q
     |||||  | ||||| | ||||||  ||||| || |||   |||| |||||||| |||| ||||  ||||||| ||||  |||| ||||| ||||| |||    
T  27603574 gttagaaggatatgagaagattcccaataaaaagatccacgagattcttaaagtaagctatgatgctttggaggaagagcagcagagtgtctttctagac 27603475  T
Q  373 attgcttgttgtttcagaggatatatattagcagaggttgaagatat 419  Q
    ||||||||||| |||| ||||| |  ||| | || ||||||||||||    
T  27603474 attgcttgttgcttcaaaggatgtggattggaagtggttgaagatat 27603428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #107
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 426 - 468
Target Start/End: Original strand, 28150646 - 28150688
Alignment:
Q  426 tgctcattacggtgaatgcatgaaatatcatattagagtgttg 468  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||    
T  28150646 tgctcattatggtcaatgcatgaaatatcatattggagtgttg 28150688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #108
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 651
Target Start/End: Complemental strand, 29727581 - 29727451
Alignment:
Q  521 cattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagacat 620  Q
    |||||||||| ||| |||| || ||||| |||||||||||| ||||||| ||||||||  | || ||  |||| ||||| ||||||  || |||||| ||    
T  29727581 cattacatgatttgctagaagatatgggaaaagaaattgttagacaagagtcaccaaataatccgggagaacgcagtaggttatgggaccctaaagatat 29727482  T
Q  621 agtccaagttttagaagaaaatttggtgagt 651  Q
    |    |||||||||||||||||  |||||||    
T  29727481 acaaaaagttttagaagaaaataaggtgagt 29727451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #109
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 29477035 - 29476962
Alignment:
Q  173 ttttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagttgattctagcttgtttgga 246  Q
    |||||||||| ||||| |||||||| || || ||||||||||| || |||||| | | ||| ||||||||||||    
T  29477035 ttttaaaccgagcagtaacttatgcttccgggcttccattggccttggaagtaataggttcaagcttgtttgga 29476962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 156; Significance: 2e-82; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 29 - 464
Target Start/End: Original strand, 3280727 - 3281162
Alignment:
Q  29 ttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaaatg 128  Q
    |||| |||||||||||||| ||| || || |||||||||||||   ||| |||||| |||||| |||||||||||||||||| || || ||||| | |||    
T  3280727 ttaccactcgagacaaacacttgttatcaagtcatgggattgaactaacatatgaaatagatgagttaaataaggaagaagcacttgaattgcttacatg 3280826  T
Q  129 gaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagtt 228  Q
    |||||| ||||||| |||  ||||| ||||||||||||||||| || ||||||| ||||| | |||||| ||||||||||||||||| ||||||||| |     
T  3280827 gaaggcttttaaaagtaagcaagttaattcaagttatgagcacgttctaaaccgcgcagtaaattatgcttctggccttccattggcattagaagtatta 3280926  T
Q  229 gattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtga 328  Q
    | ||| | ||||||||||||| ||| | | |||||||| |||   || ||||| ||||||||||||||| |||||||| | | |||||||||||||||||    
T  3280927 ggttccaacttgtttggaaagaatataaaagagtggaattctttgttggatcgatatgaaaggattcctaataaagagattcagaagatacttaaagtga 3281026  T
Q  329 gctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggatatatattagcagaggttgaagatattctctatgc 428  Q
    | ||||||  ||||||| |||| |||||||||||||||||||||||||||||||| || | ||| ||||   ||  | || | |||||||| || | ||     
T  3281027 gttttgatgctttggaggaagacgagcaaagtgtttttctcgacattgcttgttgctttaaagggtataacctaaaacagatggaagatatgctttctga 3281126  T
Q  429 tcattacggtgaatgcatgaaatatcatattagagt 464  Q
    |||||||||| |||||||||||||||||||| ||||    
T  3281127 tcattacggtcaatgcatgaaatatcatattggagt 3281162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 514 - 642
Target Start/End: Complemental strand, 17991832 - 17991704
Alignment:
Q  514 tatgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccata 613  Q
    ||||| ||| ||||||||||||||||||| |||||||||||||| ||||| ||||||||||| |||||||||||  ||||||||||||| ||||   |||    
T  17991832 tatgttacagtacatgacttgatagaggacatgggtaaagaaatcgttcggcaagaatcacctaaagagcctggagaacggagtagattgtggtgttata 17991733  T
Q  614 aagacatagtccaagttttagaagaaaat 642  Q
    | |||||||| || |||||| | ||||||    
T  17991732 atgacatagttcatgttttacaggaaaat 17991704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 29 - 249
Target Start/End: Complemental strand, 17992329 - 17992109
Alignment:
Q  29 ttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaaatg 128  Q
    |||| |||||||||||||||||| || |||||||||||||| | | ||  |||||| ||||||| |||||| ||||||||||||| ||  || | |  ||    
T  17992329 ttaccactcgagacaaacatttgttaacatgtcatgggattaaaacaatatatgaagtagatggattaaatgaggaagaagctcttgaactgttaaggtg 17992230  T
Q  129 gaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagtt 228  Q
    |||||||||||||   ||  || ||||||| |||||| |  | ||||||||||||| |||||  |||||  ||||||| ||||| ||||||||||||||     
T  17992229 gaaggcatttaaaggcaacgaaattgattctagttataactatattttaaaccgtgtagttaaatatgctgctggcctcccattagctttagaagtagtg 17992130  T
Q  229 gattctagcttgtttggaaag 249  Q
    | ||| | |||||||||||||    
T  17992129 ggttccaacttgtttggaaag 17992109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 17713508 - 17713561
Alignment:
Q  172 attttaaaccgtgcagttacttatgcctctggccttccattggctttagaagta 225  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  17713508 atttcaaaccgtgcagtttcttatgcttctggccttccattggctttggaagta 17713561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 17662487 - 17662535
Alignment:
Q  177 aaaccgtgcagttacttatgcctctggccttccattggctttagaagta 225  Q
    ||||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  17662487 aaaccgtgcagtttcttatgcttctggccttccattggctttggaagta 17662535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 526 - 617
Target Start/End: Original strand, 3281218 - 3281309
Alignment:
Q  526 catgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaaga 617  Q
    |||||||||||||| || |||||||||||||||||  |||| ||||||  || ||||||||| ||||| || || || ||||||||| ||||    
T  3281218 catgacttgatagaagacatgggtaaagaaattgtaagacaggaatcagtaagagagcctggaaaacgtagcaggttgtggttccatgaaga 3281309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 1e-70; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 29 - 653
Target Start/End: Original strand, 16691935 - 16692550
Alignment:
Q  29 ttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaaatg 128  Q
    |||| |||||||||||||| || ||| || ||||||| ||||| ||||  |||||| | ||||| ||||||   ||||||||||||||  |  |||  ||    
T  16691935 ttaccactcgagacaaacacttactaacaagtcatggtattgatagaatatatgaagtggatggtttaaatggagaagaagctctagaactattgaggtg 16692034  T
Q  129 gaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagtt 228  Q
    |||| | ||||||||||| ||||| ||||||||||  ||| ||||||||||   ||  || |||||||| |||||||||||||| ||||||||||||||     
T  16692035 gaagacttttaaaaataacaaagtcgattcaagtttcgagtacattttaaaatatgttgtaacttatgcttctggccttccattagctttagaagtagta 16692134  T
Q  229 gattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtga 328  Q
    |  |||| ||||||||||||| ||| ||| || |||||||||||||| ||||| |||||| ||||||||  ||||    | |  || ||||||||||| |    
T  16692135 ggatctaacttgtttggaaagaatatagaagaatggaaatctacatttgatcgatatgaatggattcctggtaaacgaattcacaaaatacttaaagtaa 16692234  T
Q  329 gctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggatatatattagcagaggttgaagatattctctatgc 428  Q
    | ||||||||||||||| |||||||  | ||||||||| | |||||||||||||| |||| |||||||   ||  | || |||||   ||| || | |||    
T  16692235 gttttgatagtttggaggaagatgaaaagagtgtttttttggacattgcttgttgcttcaaaggatatgatttgacggaagttgagtttatactttgtgc 16692334  T
Q  429 tcattacggtgaatgcatgaaatatcatattagagtgttgatcgagaaatgtctaataaagatttatagacaatgtggttgtacttatgtgacattacat 528  Q
    |||||| ||| ||||||| ||||| |||||| |||| ||| | || ||||  || ||||||||| ||   ||||| ||      |||||||||||| |||    
T  16692335 tcattatggtaaatgcataaaataccatattggagtattggttgaaaaatcccttataaagattaat---caatgggg------ttatgtgacattgcat 16692425  T
Q  529 gacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagacatagtccaag 628  Q
     ||||||| ||||| ||||||||||||||||| ||| ||||||| |||||| | ||||| ||||| ||||| || ||||| ||  |||| ||||| ||||    
T  16692426 cacttgattgaggacatgggtaaagaaattgtccgaaaagaatccccaaaacatcctggtaaacgcagtaggttgtggtttcacgaagatatagttcaag 16692525  T
Q  629 ttttagaagaaaatttggtgagtaa 653  Q
    |||||||||||||| ||||||||||    
T  16692526 ttttagaagaaaatatggtgagtaa 16692550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 5e-55; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 29 - 458
Target Start/End: Complemental strand, 5090064 - 5089635
Alignment:
Q  29 ttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaaatg 128  Q
    |||| |||||||||||||| ||||||  ||||||||||||||| | ||| || ||| ||||||| |||||| || | ||||||||  | ||  | |  ||    
T  5090064 ttaccactcgagacaaacacttgctaaaatgtcatgggattgatataacatacgaagtagatggtttaaatgagaacgaagctcttcaattattaaggtg 5089965  T
Q  129 gaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagtt 228  Q
    |||||| |||||||||| ||  ||| || ||||||||||    |||||||||||||  || |||||||| |||||||||||||||||||||||||| ||     
T  5089964 gaaggcttttaaaaatagtactgttaatccaagttatgaaggaattttaaaccgtgtggtaacttatgcttctggccttccattggctttagaagttgtg 5089865  T
Q  229 gattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtga 328  Q
    | ||| |  |||||||||||| ||| |||  | |||||||||  | |||||  |||||||||||||||| |||||||  |||  |||||||||| |||||    
T  5089864 ggttccaatttgtttggaaaggatatagaaaaatggaaatctttactagatgagtatgaaaggattcctaataaagaaatccaaaagatacttatagtga 5089765  T
Q  329 gctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggatatatattagcagaggttgaagatattctctatgc 428  Q
    ||||| ||| ||| |   || ||||||| |||||||| |||||||||||||||||||||| ||||||||  || |  ||||| ||| |||| || | |||    
T  5089764 gctttaataatttaggtgaatatgagcagagtgttttcctcgacattgcttgttgtttcaaaggatatagcttggatgaggtcgaatatatactttgtgc 5089665  T
Q  429 tcattacggtgaatgcatgaaatatcatat 458  Q
    |||||| ||| | |||||||||||||||||    
T  5089664 tcattatggttattgcatgaaatatcatat 5089635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 105 - 388
Target Start/End: Original strand, 18074905 - 18075188
Alignment:
Q  105 agaagctctagagttgctgaaatggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggc 204  Q
    ||||||||| || ||| |||  |||| ||| ||||||||| | ||||||  ||||||||||||  | ||||| || |||| |||| ||||||| ||||||    
T  18074905 agaagctcttgaattgttgaggtggatggcttttaaaaatgacaaagttccttcaagttatgaaaagattttgaatcgtgtagttgcttatgcttctggc 18075004  T
Q  205 cttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaag 304  Q
    |||||  | | | ||||| |||| | ||||| ||||||||||||| | | ||| || || ||   |||||||||| ||||||||| ||||||  ||||||    
T  18075005 cttccggtagttatagaaatagtgggttctaacttgtttggaaagaacatagaagaatgcaagaatacattagattggtatgaaaagattcccaataaag 18075104  T
Q  305 aggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttca 388  Q
    || |||  |  |||||||||||||||| ||||  ||||||| |||| ||||||||||| ||||| |||||||||||||| ||||    
T  18075105 agatccaaagaatacttaaagtgagctatgattctttggaggaagaggagcaaagtgtctttctagacattgcttgttgcttca 18075188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 127 - 416
Target Start/End: Complemental strand, 18654489 - 18654200
Alignment:
Q  127 tggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtag 226  Q
    |||| ||| ||||||| | | ||||||  ||||||||||||  | |||||||||||||||||| | ||||| |||||||||||||| ||| ||||||| |    
T  18654489 tggatggcttttaaaatttacaaagttccttcaagttatgaagagattttaaaccgtgcagttgcgtatgcttctggccttccattagctatagaagtcg 18654390  T
Q  227 ttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagt 326  Q
    | | ||| | |||||||||||||  ||  |  || ||  ||||||||||||||  ||||||||| ||||| ||| ||||  |||  ||||||||||||||    
T  18654389 tgggttccaacttgtttggaaagagtattgcagaatgtgaatctacattagataagtatgaaagaattccacatgaagatatccaaaagatacttaaagt 18654290  T
Q  327 gagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggatatatattagcagaggttgaaga 416  Q
     || ||||||  ||||||  ||||  | |||||||| ||| | || ||||||||||  |||| ||||| || ||| ||||| || |||||    
T  18654289 aagttttgatgctttggatgaagaacaacaaagtgtctttttggatattgcttgtttgttcaaaggatgtagattggcagaagtcgaaga 18654200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 127 - 336
Target Start/End: Complemental strand, 18678572 - 18678363
Alignment:
Q  127 tggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtag 226  Q
    |||| ||| ||||||| | | ||||||  ||||||||||||  | |||||||| |||||||||   ||||| |||||||||||||| ||| |||||||||    
T  18678572 tggatggcttttaaaagttacaaagttccttcaagttatgaagagattttaaaacgtgcagttgtgtatgcttctggccttccattagctatagaagtag 18678473  T
Q  227 ttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagt 326  Q
    | | ||| | ||||||||||||| |||     || ||  | ||||||||||||  ||||||||| ||||| ||| ||||  |||  ||||||||||||||    
T  18678472 tgggttccaacttgtttggaaagaatatttcagaatgtgagtctacattagataagtatgaaagaattccacatgaagatatccaaaagatacttaaagt 18678373  T
Q  327 gagctttgat 336  Q
     |||||||||    
T  18678372 aagctttgat 18678363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 127 - 416
Target Start/End: Complemental strand, 18698412 - 18698123
Alignment:
Q  127 tggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtag 226  Q
    |||| ||| ||||||||| | ||||||  ||||||||||||  | ||||| |||| |||||||   ||||| |||||||||||||| ||| |||||||||    
T  18698412 tggatggcttttaaaaattacaaagttccttcaagttatgaagagatttttaaccatgcagttgtgtatgcttctggccttccattagctctagaagtag 18698313  T
Q  227 ttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagt 326  Q
    | | ||| | |||||||||||||  |   |  || ||  | ||||||||||||  ||||||||| ||||| ||| ||||  |||  ||||||||||||||    
T  18698312 tgggttccaacttgtttggaaagagttttgcagaatgtgactctacattagataagtatgaaagaattccacatgaagatatccaaaagatacttaaagt 18698213  T
Q  327 gagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggatatatattagcagaggttgaaga 416  Q
     |||||||||  ||||||  ||||  | |||||||| ||| | || ||||||||||  |||| ||||| ||  || ||||| ||||||||    
T  18698212 aagctttgatgctttggacgaagaacaacaaagtgtctttttggatattgcttgtttcttcaaaggatgtagtttggcagaagttgaaga 18698123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 127 - 336
Target Start/End: Complemental strand, 18723097 - 18722888
Alignment:
Q  127 tggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtag 226  Q
    |||| ||| ||||||| | | ||||||  ||||||||||||  | ||||||||||| |||||| | ||||| |||||||||||||| ||| |||||||||    
T  18723097 tggatggcttttaaaagttacaaagttccttcaagttatgaagagattttaaaccgagcagttgcgtatgcttctggccttccattagctatagaagtag 18722998  T
Q  227 ttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagt 326  Q
    | | ||| | |||||||||||||  ||  |  || ||  | ||||||||||||  ||||||||| |||||  || ||||  |||  ||||||||||||||    
T  18722997 tgggttccaacttgtttggaaagagtattgcagaatgtgagtctacattagatatgtatgaaagaattccagatgaagatatccaaaagatacttaaagt 18722898  T
Q  327 gagctttgat 336  Q
     |||||||||    
T  18722897 aagctttgat 18722888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 127 - 416
Target Start/End: Complemental strand, 18730516 - 18730227
Alignment:
Q  127 tggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtag 226  Q
    |||| ||| ||||||||| | ||||||  ||||||||||||  | ||||| |||| |||||||   ||||| |||||||||||||| ||| |||||||||    
T  18730516 tggatggcttttaaaaattacaaagttccttcaagttatgaagagatttttaaccatgcagttgtgtatgcttctggccttccattagctctagaagtag 18730417  T
Q  227 ttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagt 326  Q
    | | ||| | |||||||||||||  |   |  || ||  | ||||||||||||  ||||||||| ||||| ||| ||||  |||  ||||||||||||||    
T  18730416 tgggttccaacttgtttggaaagagttttgcagaatgtgattctacattagataagtatgaaagaattccacatgaagatatccaaaagatacttaaagt 18730317  T
Q  327 gagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggatatatattagcagaggttgaaga 416  Q
     |||||||||  ||||||  ||||  | |||||||| ||| | || ||||||||||  |||| ||||| || ||| ||||| || |||||    
T  18730316 aagctttgatgctttggacgaagaacaacaaagtgtctttttggatattgcttgtttcttcaaaggatgtagattggcagaagtcgaaga 18730227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 249
Target Start/End: Complemental strand, 18688638 - 18688516
Alignment:
Q  127 tggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtag 226  Q
    |||| ||| ||||||| | ||||||||  ||||||||||||  | |||||||||||||||||    ||||| |||||||||||||| ||| |||||||||    
T  18688638 tggatggcttttaaaagttataaagttccttcaagttatgaagagattttaaaccgtgcagtcgtgtatgcttctggccttccattagctatagaagtag 18688539  T
Q  227 ttgattctagcttgtttggaaag 249  Q
    | | ||| | |||||||||||||    
T  18688538 tgggttccaacttgtttggaaag 18688516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 517 - 586
Target Start/End: Complemental strand, 18688248 - 18688179
Alignment:
Q  517 gtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctg 586  Q
    |||||||||||||||||| ||||||  ||||||||||||||||| ||  |||||||||| ||||||||||    
T  18688248 gtgacattacatgacttgctagaggtcatgggtaaagaaattgtccggaaagaatcacctaaagagcctg 18688179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 515 - 586
Target Start/End: Complemental strand, 18730131 - 18730060
Alignment:
Q  515 atgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctg 586  Q
    |||||||||||||||||||| ||||||  |||||||||||||| || ||  |||||||||| ||||||||||    
T  18730131 atgtgacattacatgacttgctagaggtcatgggtaaagaaatcgtccggaaagaatcacccaaagagcctg 18730060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 517 - 586
Target Start/End: Complemental strand, 18678191 - 18678122
Alignment:
Q  517 gtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctg 586  Q
    |||||||||||||||||| ||||||  |||||||||||||| || ||  |||||||||| ||||||||||    
T  18678191 gtgacattacatgacttgctagaggtcatgggtaaagaaatcgtccggaaagaatcacccaaagagcctg 18678122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 517 - 586
Target Start/End: Complemental strand, 18698034 - 18697965
Alignment:
Q  517 gtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctg 586  Q
    |||||||||||||||||| ||||||  |||||||||||||| || ||  |||||||||| ||||||||||    
T  18698034 gtgacattacatgacttgctagaggccatgggtaaagaaatcgtccggaaagaatcacccaaagagcctg 18697965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 517 - 586
Target Start/End: Complemental strand, 18722704 - 18722635
Alignment:
Q  517 gtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctg 586  Q
    |||||||||||||||||| ||||||  ||||||||||||||  ||||  |||||||||| ||||||||||    
T  18722704 gtgacattacatgacttgctagaggtcatgggtaaagaaatcattcgtaaagaatcacctaaagagcctg 18722635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 586
Target Start/End: Complemental strand, 18654111 - 18654042
Alignment:
Q  517 gtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctg 586  Q
    |||||||||||||||||| ||||||  |||||||||||||| || ||  |||||||||| ||| ||||||    
T  18654111 gtgacattacatgacttgctagaggtcatgggtaaagaaatcgtccggaaagaatcacctaaacagcctg 18654042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 516 - 572
Target Start/End: Complemental strand, 5089589 - 5089533
Alignment:
Q  516 tgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatc 572  Q
    |||||||||||||||| |||||||    ||||||||||||||||||||| |||||||    
T  5089589 tgtgacattacatgacctgatagaaatcatgggtaaagaaattgttcgaaaagaatc 5089533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 106; Significance: 1e-52; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 29 - 642
Target Start/End: Complemental strand, 57408 - 56795
Alignment:
Q  29 ttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaaatg 128  Q
    |||| ||||||||| |||| ||||||||| ||||||||||||| ||| | |||||| |||||  ||||||| || |||||||||| || ||| |||  ||    
T  57408 ttaccactcgagacgaacaattgctagcaggtcatgggattgaaagagcatatgaaatagataagttaaatgagaaagaagctcttgaattgttgaggtg 57309  T
Q  129 gaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagtt 228  Q
    ||| || || |||||||| |||||  || ||| ||  ||  || ||||| ||| |||||| |||||||| || |||||||||||||| |||||||||||     
T  57308 gaatgctttcaaaaataacaaagtcaatccaaatttcgacaacgttttacaccttgcagtaacttatgcttcaggccttccattggccttagaagtagtg 57209  T
Q  229 gattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtga 328  Q
    | ||| | ||||||||||||| ||| ||  || ||||||||| ||||| ||| |||||||||||||||   |||| || |||   ||||||||||||| |    
T  57208 ggttcgaacttgtttggaaagaatataggagaatggaaatctgcattaaatcagtatgaaaggattcccattaaaaagatccaagagatacttaaagtaa 57109  T
Q  329 gctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggatatatattagcagaggttgaagatattctctatgc 428  Q
    ||||||||  ||||||| |||||||| | | |||||||||||||||| ||||||  ||   ||||| |   |||  ||| ||||||||||| ||  ||||    
T  57108 gctttgatgctttggaggaagatgagaagaatgtttttctcgacatttcttgtttcttagaaggatgtgatttaaaagaagttgaagatatacttcatgc 57009  T
Q  429 tcattacggtgaatgcatgaaatatcatattagagtgttgatcgagaaatgtctaataaagatttatagacaatgtggttgtacttatgtgacattacat 528  Q
    |||||| |||   ||||||||| |||| ||||||||||||   || |||| ||| ||||||||  |  |  |    ||   |  |  |||||| ||||||    
T  57008 tcattatggtagctgcatgaaacatcaaattagagtgttgcatgaaaaatctctcataaagatcaaatggtaccaggggaattatgttgtgacgttacat 56909  T
Q  529 gacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagacatagtccaag 628  Q
    | |||||||||| | ||||||||||||||||| ||  |||| || |||||||||||||| | ||| ||||| ||||||||||||||||| ||| |  | |    
T  56908 gccttgatagagaaaatgggtaaagaaattgtccgcaaagagtctccaaaagagcctggaagacgtagtaggttatggttccataaagatataatttatg 56809  T
Q  629 ttttagaagaaaat 642  Q
    | ||||||||||||    
T  56808 tcttagaagaaaat 56795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 99; Significance: 2e-48; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 182 - 468
Target Start/End: Original strand, 44178 - 44464
Alignment:
Q  182 gtgcagttacttatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcg 281  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||| | ||| | ||| ||||||||  ||| ||  || ||||||||| ||||||||||    
T  44178 gtgcagtaacttatgcttctggccttccattggctttagaagtagtgggttcaaacttatttggaaataatataggagaatggaaatctgcattagatcg 44277  T
Q  282 gtatgaaaggattcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgt 381  Q
    ||||  |||||||||   |||| || | | | ||||||||||||| |||||||||  |||||||||||||||||| | |||||||||||||||||||||     
T  44278 gtatagaaggattccgattaaaaagatacaggagatacttaaagtaagctttgatgctttggagaaagatgagcagaatgtttttctcgacattgcttgc 44377  T
Q  382 tgtttcagaggatatatattagcagaggttgaagatattctctatgctcattacggtgaatgcatgaaatatcatattagagtgttg 468  Q
    || |||| ||||||||  ||   |||  |||||||||| || ||||||||||| ||| | |||||||||||||| || || ||||||    
T  44378 tgcttcaaaggatataatttgaaagaacttgaagatatactttatgctcattatggtaactgcatgaaatatcaaatcagtgtgttg 44464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 29 - 383
Target Start/End: Original strand, 40584 - 40937
Alignment:
Q  29 ttacaactcgagacaaacatttgctagcatg---tcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaa 125  Q
    |||| ||||||||||||| ||||||| ||||   |||  || |||| | ||| |||||| | ||| ||||||||  || ||||||||| || ||  |||     
T  40584 ttaccactcgagacaaacgtttgctaacatgcagtcacagggttgaaacaacctatgaagtggattggttaaatgtggcagaagctcttgaattattgac 40683  T
Q  126 atggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagta 225  Q
     |||||||||||||||| ||| | |||  ||||||||||  || ||||| ||    ||||| | |||||||| |||||||| ||||| ||||||||||||    
T  40684 gtggaaggcatttaaaagtaacagagtccattcaagttacaagtacattctaccatgtgcaataacttatgcttctggcctaccattagctttagaagta 40783  T
Q  226 gttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaag 325  Q
    |||| ||| | ||||||||||    ||| ||  || ||| |||| |||||||| | |||||||||||||||  |||||||| |||  |||||||||||||    
T  40784 gttggttccaacttgtttggattagatataggagaatgggaatccacattagaccagtatgaaaggattccaaataaagagatccaaaagatacttaaag 40883  T
Q  326 tgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttg 383  Q
    |    ||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  40884 t----tttgatgctttggagaaagatgagcaaagtgtttttctcgacattgcttgttg 40937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 160
Target Start/End: Original strand, 35795 - 35926
Alignment:
Q  29 ttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaaatg 128  Q
    |||| |||||||||||||| ||||||||| ||||||||||||| ||||| || ||| |||||  ||||||| || | |||||||| || ||| |||  ||    
T  35795 ttaccactcgagacaaacaattgctagcaagtcatgggattgaaagaacgtacgaaatagataagttaaatgagaacgaagctcttgaattgttgaggtg 35894  T
Q  129 gaaggcatttaaaaataataaagttgattcaa 160  Q
    |||||| || ||| |||| || || |||||||    
T  35895 gaaggctttaaaatataacaaggtcgattcaa 35926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 28518 - 28602
Alignment:
Q  29 ttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctct 113  Q
    |||| |||||| ||||||| ||||||||| ||||||||||||| ||| | |||||| |||||  ||||||| || | ||||||||    
T  28518 ttaccactcgaaacaaacaattgctagcaagtcatgggattgaaagagcatatgaaatagataagttaaatgagaacgaagctct 28602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 68; Significance: 6e-30; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 105 - 388
Target Start/End: Original strand, 60713 - 60996
Alignment:
Q  105 agaagctctagagttgctgaaatggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggc 204  Q
    ||||||||| || ||| |||  |||| ||| ||||||||| | ||||||  ||||||||||||  | ||||| || |||| |||| ||||||| ||||||    
T  60713 agaagctcttgaattgttgaggtggatggcttttaaaaatgacaaagttccttcaagttatgaaaagattttgaatcgtgtagttgcttatgcttctggc 60812  T
Q  205 cttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaag 304  Q
    |||||  | | | ||||| |||| | ||||| ||||||||||||| | | ||| || || ||   |||||||||| ||||||||| ||||||  ||||||    
T  60813 cttccggtagttatagaaatagtgggttctaacttgtttggaaagaacatagaagaatgcaagaatacattagattggtatgaaaagattcccaataaag 60912  T
Q  305 aggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttca 388  Q
    || |||  |  |||||||||||||||| ||||  ||||||| |||| ||||||||||| ||||| |||||||||||||| ||||    
T  60913 agatccaaagaatacttaaagtgagctatgattctttggaggaagaggagcaaagtgtctttctagacattgcttgttgcttca 60996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 2e-29; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 516 - 642
Target Start/End: Original strand, 26137434 - 26137560
Alignment:
Q  516 tgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaa 615  Q
    |||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| ||||| ||||| ||||| || ||||| ||| ||    
T  26137434 tgtggcattacatgacttgatagaggatatgggtaaagaaattgtccgacaagaatcacccaaagaacctggaaaacgcagtaggttgtggtttcatgaa 26137533  T
Q  616 gacatagtccaagttttagaagaaaat 642  Q
    || ||||| || |||||| ||||||||    
T  26137534 gatatagttcatgttttaaaagaaaat 26137560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 172 - 396
Target Start/End: Complemental strand, 267311 - 267087
Alignment:
Q  172 attttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatcta 271  Q
    |||||||  ||||||||| ||||||| ||||||||||| || | ||||||| | || | ||||| |||||||||||||   | ||| || |||||   ||    
T  267311 attttaattcgtgcagttgcttatgcttctggccttccgttagttttagaaattgtgggttctaacttgtttggaaagagcatagaagaatggaagggta 267212  T
Q  272 cattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcga 371  Q
    |||||||| ||||||| | ||||||  |||||||| |||  ||||||||||||||||||| |||| |||||||  |||| ||||| ||||| ||| | ||    
T  267211 cattagatgggtatgataagattcccaataaagagatccaaaagatacttaaagtgagctatgatggtttggaagaagaggagcagagtgtctttttaga 267112  T
Q  372 cattgcttgttgtttcagaggatat 396  Q
    |||||||||||| |||| |||||||    
T  267111 cattgcttgttgcttcaaaggatat 267087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 37 - 388
Target Start/End: Original strand, 26136964 - 26137315
Alignment:
Q  37 cgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaaatggaaggcat 136  Q
    |||||||||||||||||| |||||||||||||| | ||||  |||||| | |||   ||||||||||| |||||||| || ||| | |  |||| ||| |    
T  26136964 cgagacaaacatttgctatcatgtcatgggattaaaagaatatatgaagtcgatttcttaaataaggatgaagctcttgaattgtttaggtggatggctt 26137063  T
Q  137 ttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagttgattctag 236  Q
    |||||| |||  |   ||| |||||||||||  | ||||||||| |||||||||  ||||| ||||||||||| || |||||||||||||| | ||| ||    
T  26137064 ttaaaagtaaccacaatgactcaagttatgattatattttaaacagtgcagttaaatatgcttctggccttccgttagctttagaagtagtgggttccag 26137163  T
Q  237 cttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtgagctttgat 336  Q
    |||||||||||||  || |   || ||| ||||||||||| |   ||||||||||||||| ||| ||||  |||  || ||||||| ||| |||| ||||    
T  26137164 cttgtttggaaagtgtacaacagaatgggaatctacattacagaagtatgaaaggattccacatgaagatatccaaaacatacttagagtaagctatgat 26137263  T
Q  337 agtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttca 388  Q
      ||||||  ||||  | |||||||| ||| | || ||||||||||| ||||    
T  26137264 gctttggacgaagaacaacaaagtgtatttttggatattgcttgttgcttca 26137315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 520 - 642
Target Start/End: Complemental strand, 5922101 - 5921979
Alignment:
Q  520 acattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagaca 619  Q
    |||||||||||  |||||||||| ||||| |||||||||||| ||||||||||||| ||||||||||| || || ||||| ||||||| || | |||| |    
T  5922101 acattacatgatgtgatagaggacatgggaaaagaaattgttagacaagaatcaccgaaagagcctggaaagcgcagtaggttatggtgccctgaagata 5922002  T
Q  620 tagtccaagttttagaagaaaat 642  Q
    |||| ||||||||||||||||||    
T  5922001 tagttcaagttttagaagaaaat 5921979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 607
Target Start/End: Complemental strand, 266980 - 266888
Alignment:
Q  515 atgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggt 607  Q
    ||||||||||||||||| |||||||||| |||||||||||| | || || ||||||||||| |||||||||||  |||| ||||| |||||||    
T  266980 atgtgacattacatgacatgatagaggacatgggtaaagaagtggtccgccaagaatcacctaaagagcctggagaacgaagtaggttatggt 266888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 265 - 396
Target Start/End: Complemental strand, 5922347 - 5922216
Alignment:
Q  265 aaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgttt 364  Q
    ||||||||||||||||| ||||||||||||||| ||||| || | |  | | | || |||||||||||||||  ||||||  |||| ||| |||||||||    
T  5922347 aaatctacattagatcgttatgaaaggattcctgataaaaagatgcaaacgttgctaaaagtgagctttgatgctttggaagaagaagagaaaagtgttt 5922248  T
Q  365 ttctcgacattgcttgttgtttcagaggatat 396  Q
    |||| || ||||||||||| |||| |||||||    
T  5922247 ttcttgatattgcttgttgcttcaaaggatat 5922216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 127 - 587
Target Start/End: Complemental strand, 28126691 - 28126243
Alignment:
Q  127 tggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtag 226  Q
    |||| ||| |||||| |||| ||||||  ||||||||||||  |  |||||||||| |||||| | ||||| || |||||||| || | | ||||| |||    
T  28126691 tggatggcttttaaacataacaaagttccttcaagttatgatgatgttttaaaccgggcagtttcatatgcttcaggccttcccttagttatagaaatag 28126592  T
Q  227 ttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagt 326  Q
    | | ||| | ||| |||||||||   | ||| || |||||   |||||||||| | ||||||| ||||||  ||||| || |||   ||||| ||||| |    
T  28126591 tgggttccaacttatttggaaagagcatagaagaatggaagggtacattagatggatatgaaaagattccaaataaaaagatccaagagatatttaaact 28126492  T
Q  327 gagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggatatatattagcagaggttgaagatattctctat 426  Q
     |||| ||||  ||||||| |||||||||||||||| |||||||| || ||||| || |||| ||| |||| |||  ||||||||||| | || ||  ||    
T  28126491 aagctatgatgctttggaggaagatgagcaaagtgtctttctcgatatagcttgctgcttcaaagggtatagattgacagaggttgaaaagatacttcat 28126392  T
Q  427 gctcattacggtgaatgcatgaaatatcatattagagtgttgatcgagaaatgtctaataaagatttatagacaatgtggttgtacttatgtgacattac 526  Q
    |||||||| ||  | ||||| ||  ||||| || |||||||| | || |||| ||| ||  ||||| |||  ||||            ||||||||||||    
T  28126391 gctcattatggccattgcataaagcatcatgttggagtgttggttgaaaaatctctcattgagattaatactcaat------------atgtgacattac 28126304  T
Q  527 atgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgg 587  Q
    |||||||||||||||| | |||||||||||| || ||  |||||||||  |||||||||||    
T  28126303 atgacttgatagaggatacgggtaaagaaatcgtccggaaagaatcacgtaaagagcctgg 28126243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 66; Significance: 9e-29; HSPs: 4)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 105 - 394
Target Start/End: Complemental strand, 3750 - 3461
Alignment:
Q  105 agaagctctagagttgctgaaatggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggc 204  Q
    ||||||||| |||||| ||| ||||| ||| ||||| ||||| |||||   ||||||||||||  || ||||||| ||||||||| | ||||| || |||    
T  3750 agaagctcttgagttgttgagatggatggcttttaagaataacaaagtaccttcaagttatgaagacgttttaaatcgtgcagtttcatatgcttcgggc 3651  T
Q  205 cttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaag 304  Q
    ||||| || | ||||||| |||| | ||| | |||||||||||||   | ||| || |||||   |||||||||| | ||||||| ||||||  |||||     
T  3650 cttcccttagttttagaaatagtgggttccaacttgtttggaaagacgatagaagaatggaagggtacattagatggatatgaaaagattcccaataaaa 3551  T
Q  305 aggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggat 394  Q
    || |||   ||||||||||||| |||| ||||  ||||||| ||||  |||||||||||||||| |||||||| ||||| |||| |||||    
T  3550 agatccaccagatacttaaagtaagctatgatgctttggaggaagagcagcaaagtgtttttctagacattgcctgttgcttcaaaggat 3461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 105 - 394
Target Start/End: Complemental strand, 12713 - 12424
Alignment:
Q  105 agaagctctagagttgctgaaatggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggc 204  Q
    ||||||||| |||||| ||| ||||| ||| ||||| ||||| |||||   ||||||||||||  || ||||||| ||||||||| | ||||| || |||    
T  12713 agaagctcttgagttgttgagatggatggcttttaagaataacaaagtaccttcaagttatgaagacgttttaaatcgtgcagtttcatatgcttcgggc 12614  T
Q  205 cttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaag 304  Q
    ||||| || | ||||||| |||| | ||| | |||||||||||||   | ||| || |||||   |||||||||| | ||||||| ||||||  |||||     
T  12613 cttcccttagttttagaaatagtgggttccaacttgtttggaaagacgatagaagaatggaagggtacattagatggatatgaaaagattcccaataaaa 12514  T
Q  305 aggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggat 394  Q
    || |||   ||||||||||||| |||| ||||  ||||||| ||||  |||||||||||||||| |||||||| ||||| |||| |||||    
T  12513 agatccacgagatacttaaagtaagctatgatgctttggaggaagagcagcaaagtgtttttctagacattgcctgttgcttcaaaggat 12424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 518 - 607
Target Start/End: Complemental strand, 3331 - 3242
Alignment:
Q  518 tgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggt 607  Q
    ||||| |||||||||||||| |||| |||||||||||| | || ||||||||||| || |||||||||||  || | |||||||||||||    
T  3331 tgacactacatgacttgataaaggacatgggtaaagaagtcgtccgacaagaatcgcccaaagagcctggagaaagaagtagattatggt 3242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 518 - 607
Target Start/End: Complemental strand, 12294 - 12205
Alignment:
Q  518 tgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggt 607  Q
    ||||| |||||||||||||| |||| |||||||||||| | || ||||||||||| || |||||||||||  || | |||||||||||||    
T  12294 tgacactacatgacttgataaaggacatgggtaaagaagtcgtccgacaagaatcgcccaaagagcctggagaaagaagtagattatggt 12205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 105 - 394
Target Start/End: Original strand, 8631 - 8920
Alignment:
Q  105 agaagctctagagttgctgaaatggaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggc 204  Q
    ||||||||| |||||| ||| ||||| ||| ||||| ||||| |||||   ||||||||||||  || ||||||| ||||||||| | ||||| || |||    
T  8631 agaagctcttgagttgttgagatggatggcttttaagaataacaaagtaccttcaagttatgaagacgttttaaatcgtgcagtttcatatgcttcgggc 8730  T
Q  205 cttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaaggattcctcataaag 304  Q
    ||||| || | ||||||| |||| | ||| | |||||||||||||   | ||| || |||||   |||||||||| | ||||||| ||||||  |||||     
T  8731 cttcccttagttttagaaatagtgggttccaacttgtttggaaagacgatagaagaatggaagggtacattagatggatatgaaaagattcccaataaaa 8830  T
Q  305 aggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagaggat 394  Q
    || |||   ||||||||||||| || | ||||  ||||||| ||||  |||||||||||||||| |||||||| ||||| |||| |||||    
T  8831 agatccacgagatacttaaagtaagttatgatgctttggaggaagagcagcaaagtgtttttctagacattgcctgttgcttcaaaggat 8920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 515 - 584
Target Start/End: Original strand, 9050 - 9119
Alignment:
Q  515 atgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcc 584  Q
    ||||||||||||||||||| |||||||| |||||||||||| | || ||||||||||| || ||||||||    
T  9050 atgtgacattacatgactttatagaggacatgggtaaagaagtcgtacgacaagaatcgcctaaagagcc 9119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 61; Significance: 8e-26; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 172 - 388
Target Start/End: Complemental strand, 2510 - 2294
Alignment:
Q  172 attttaaaccgtgcagttacttatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatcta 271  Q
    |||||||||||||||||| | ||||| ||||||||||| || | | ||||| |||| | ||||| ||| | ||||||| | | ||| || |||||   ||    
T  2510 attttaaaccgtgcagttgcatatgcttctggccttccgttagttatagaaatagtgggttctaacttatctggaaagaacatagaggaatggaagaata 2411  T
Q  272 cattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcga 371  Q
    |||||||| ||||||| ||||||||  |||||||| |||  |||||||||||||| || | ||||  ||||||| ||||  |||||||||| ||||| ||    
T  2410 cattagatgggtatgacaggattcccaataaagagatccaaaagatacttaaagtaagttatgatgctttggaggaagagcagcaaagtgtctttctaga 2311  T
Q  372 cattgcttgttgtttca 388  Q
    |||||||||||| ||||    
T  2310 cattgcttgttgcttca 2294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 513 - 587
Target Start/End: Complemental strand, 2172 - 2098
Alignment:
Q  513 ttatgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgg 587  Q
    ||||||||  |||||||||||||||||||| |||||||||||| | || ||||||||||||   |||||||||||    
T  2172 ttatgtgatgttacatgacttgatagaggacatgggtaaagaagtcgtccgacaagaatcaattaaagagcctgg 2098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 2e-20; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 259 - 382
Target Start/End: Original strand, 35984597 - 35984720
Alignment:
Q  259 gagtggaaatctacattagatcggtatgaaaggattcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaa 358  Q
    |||||| ||||| ||||| | ||||||||||  |||||| |||||||  |||  |||||||||||||| || ||||||  ||| ||| ||||||||||||    
T  35984597 gagtgggaatctgcattacaccggtatgaaaccattcctaataaagacatccaaaagatacttaaagtaagttttgatgctttagaggaagatgagcaaa 35984696  T
Q  359 gtgtttttctcgacattgcttgtt 382  Q
    |||||||||| |||||||||||||    
T  35984697 gtgtttttcttgacattgcttgtt 35984720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 515 - 642
Target Start/End: Original strand, 12590286 - 12590413
Alignment:
Q  515 atgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataa 614  Q
    |||||||||||||||| ||| ||||||| ||||| |||||||| ||| |||||||||||||  || | ||||| ||||| ||||| ||||||| |  |||    
T  12590286 atgtgacattacatgatttggtagaggatatggggaaagaaatagttagacaagaatcaccggaaaatcctggaaaacgtagtaggttatggtcctctaa 12590385  T
Q  615 agacatagtccaagttttagaagaaaat 642  Q
    |||  || | ||||||||||||||||||    
T  12590386 agatttaattcaagttttagaagaaaat 12590413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 516 - 653
Target Start/End: Complemental strand, 16371764 - 16371627
Alignment:
Q  516 tgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaa 615  Q
    ||||||||||||| || || |||| || ||||||||||||||||| ||||||||||||||||| ||||| ||  |||| ||||| ||||||||    ||     
T  16371764 tgtgacattacataacctggtagaagacatgggtaaagaaattgtccgacaagaatcaccaaaggagccaggcgaacgtagtaggttatggtttgtcaat 16371665  T
Q  616 gacatagtccaagttttagaagaaaatttggtgagtaa 653  Q
    ||  |||| |||||||||||||| |||| ||| |||||    
T  16371664 gatgtagttcaagttttagaagacaattcggtaagtaa 16371627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 516 - 606
Target Start/End: Original strand, 16441599 - 16441689
Alignment:
Q  516 tgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatgg 606  Q
    ||||||||||||| ||||||||   || ||||| | ||||||||||||||| ||||||||||| |||||||| ||||| ||||| ||||||    
T  16441599 tgtgacattacataacttgatacgagacatgggcagagaaattgttcgacaggaatcaccaaatgagcctggcaaacgtagtaggttatgg 16441689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 524 - 638
Target Start/End: Original strand, 35984859 - 35984973
Alignment:
Q  524 tacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagacatagt 623  Q
    |||||| |||||||||||| |||||||| |||||||||||||  ||||||||| |||| ||||| || || ||| | |||||||  ||| |||| ||| |    
T  35984859 tacatgccttgatagaggacatgggtaaggaaattgttcgactggaatcaccagaagaacctggaaagcgtagtcggttatggtctcatgaagatataat 35984958  T
Q  624 ccaagttttagaaga 638  Q
     ||||||||||||||    
T  35984959 tcaagttttagaaga 35984973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 381
Target Start/End: Original strand, 31906285 - 31906474
Alignment:
Q  192 ttatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaagg 291  Q
    |||||| ||||| ||||||||||||||   |||  ||| ||| |  || ||||||||| ||| | | || ||| ||||| ||||| |||| |||||||      
T  31906285 ttatgcttctggacttccattggctttgatagttattggttccaatttatttggaaagaatatacaagaatgggaatctgcattacatcgatatgaaatc 31906384  T
Q  292 attcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgt 381  Q
    |||||  |||||||| |||  || ||||| ||||| || ||||||  ||||||| |||||||| ||||||||||||| ||||| ||||||    
T  31906385 attccaaataaagagatccaaaatatactcaaagtaagttttgatgctttggaggaagatgagaaaagtgtttttcttgacatggcttgt 31906474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 225
Target Start/End: Original strand, 16441124 - 16441320
Alignment:
Q  29 ttacaactcgagacaaacatttgctagcatgtcatgggattgagagaacttatgaactagatgggttaaataaggaagaagctctagagttgctgaaatg 128  Q
    |||||||||| |||||||| ||||||||| |||||||| |||| ||||| |||||| | ||||   |||||   ||| || ||||  | |||||    ||    
T  16441124 ttacaactcgggacaaacagttgctagcaagtcatggggttgaaagaacatatgaagtggatgcactaaatggagaaaaatctctttatttgctatgttg 16441223  T
Q  129 gaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaagta 225  Q
    ||| || || ||||   ||||||||||| |||| |||||  |||||||||| |||||| | |||| ||||||||| |||||||| |||||| |||||    
T  16441224 gaatgctttcaaaaccgataaagttgatgcaaggtatgaaaacattttaaagcgtgcattgacttttgcctctgggcttccattagctttacaagta 16441320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 524 - 652
Target Start/End: Original strand, 31906614 - 31906742
Alignment:
Q  524 tacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagacatagt 623  Q
    ||||||||||||| | ||| |||| ||||||||||||| ||   ||||||||| | || ||||| ||||| ||| |||||||||| ||  |||| ||| |    
T  31906614 tacatgacttgattggggacatggctaaagaaattgttagattggaatcaccagacgaacctggaaaacgtagtcgattatggtttcacgaagatataat 31906713  T
Q  624 ccaagttttagaagaaaatttggtgagta 652  Q
     |||||||||||||| ||||  |||||||    
T  31906714 tcaagttttagaagacaattcagtgagta 31906742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 520 - 642
Target Start/End: Original strand, 16450445 - 16450567
Alignment:
Q  520 acattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagaca 619  Q
    |||||||||||| ||||| |  | ||||| | ||||||||| ||||  ||||||||| | |||||||| ||||| ||||| ||||||||   | ||||      
T  16450445 acattacatgacctgatacaaaaaatgggcagagaaattgtccgacttgaatcaccacatgagcctggcaaacgtagtaggttatggttttgtgaagatg 16450544  T
Q  620 tagtccaagttttagaagaaaat 642  Q
    |||||||||||||| | ||||||    
T  16450545 tagtccaagttttaaatgaaaat 16450567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 518 - 653
Target Start/End: Complemental strand, 7641 - 7506
Alignment:
Q  518 tgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaaga 617  Q
    |||||||||||||  ||||||| || ||||| |||||||||||  ||| |||||||||| |  |||||||  |||| |||||||||||||    ||||||    
T  7641 tgacattacatgatctgatagaagatatgggaaaagaaattgtcagactagaatcaccagatcagcctggagaacgcagtagattatggtctgctaaaga 7542  T
Q  618 catagtccaagttttagaagaaaatttggtgagtaa 653  Q
    |||||   |||||||||||||||||  |||||||||    
T  7541 catagctgaagttttagaagaaaatacggtgagtaa 7506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 515 - 642
Target Start/End: Original strand, 615341 - 615468
Alignment:
Q  515 atgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataa 614  Q
    |||||||||||||||| ||| ||||||| ||||| |||||||||||| |||||||||||||  |||| || ||||| || ||| | |||||||    |||    
T  615341 atgtgacattacatgatttggtagaggatatggggaaagaaattgttagacaagaatcacccgaagatcccgggaagcgaagtcggttatggtcttctaa 615440  T
Q  615 agacatagtccaagttttagaagaaaat 642  Q
    ||| ||| | ||||||||| ||||||||    
T  615441 agatataattcaagttttacaagaaaat 615468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold1870
Description:

Target: scaffold1870; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 394
Target Start/End: Original strand, 1 - 202
Alignment:
Q  193 tatgcctctggccttccattggctttagaagtagttgattctagcttgtttggaaagcataaagatgagtggaaatctacattagatcggtatgaaagga 292  Q
    ||||| || |||||||| || | ||||||| |||| | ||| | |||||||||||||   | ||| || |||||   |||||||||| | ||||||| ||    
T  1 tatgcttcgggccttcccttagttttagaaatagtgggttccaacttgtttggaaagacgatagaagaatggaagggtacattagatggatatgaaaaga 100  T
Q  293 ttcctcataaagaggtcctgaagatacttaaagtgagctttgatagtttggagaaagatgagcaaagtgtttttctcgacattgcttgttgtttcagagg 392  Q
    ||||  ||||| || |||   ||||||||||||| |||| ||||  ||||||| ||||  |||||||||||||||| |||||||| ||||| |||| |||    
T  101 ttcccaataaaaagatccacgagatacttaaagtaagctatgatgctttggaggaagagcagcaaagtgtttttctagacattgcctgttgcttcaaagg 200  T
Q  393 at 394  Q
    ||    
T  201 at 202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 515 - 584
Target Start/End: Original strand, 332 - 401
Alignment:
Q  515 atgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcc 584  Q
    ||||||||||||||||||| |||||||| |||||||||||| | || ||||||||||| || ||||||||    
T  332 atgtgacattacatgactttatagaggacatgggtaaagaagtcgtacgacaagaatcgcctaaagagcc 401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 515 - 642
Target Start/End: Complemental strand, 211758 - 211631
Alignment:
Q  515 atgtgacattacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataa 614  Q
    |||||||| | ||||| ||| |||| || ||||| |||||||||||| |||||||||||||  || | ||||| ||||| |||||||||||||||  | |    
T  211758 atgtgacaatgcatgatttggtagaagatatggggaaagaaattgttagacaagaatcacctgaaaatcctggaaaacgcagtagattatggttctctga 211659  T
Q  615 agacatagtccaagttttagaagaaaat 642  Q
    ||| ||| | || |||||||| ||||||    
T  211658 agatataatgcacgttttagaggaaaat 211631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 515 - 653
Target Start/End: Complemental strand, 238502 - 238363
Alignment:
Q  515 atgtgacattacatgacttgatagaggagatgggtaaaga-aattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccata 613  Q
    |||||| ||||||||| ||| ||||||| ||||| ||||  ||||||| ||| ||| ||||| ||| | | ||| ||||| ||||| ||||||| |  ||    
T  238502 atgtgagattacatgatttggtagaggatatggggaaagtgaattgttagacgagattcacctaaaaatcttggaaaacgcagtaggttatggtcctcta 238403  T
Q  614 aagacatagtccaagttttagaagaaaatttggtgagtaa 653  Q
    |||| ||| | ||||||||||||||||||  |||||||||    
T  238402 aagatataattcaagttttagaagaaaatacggtgagtaa 238363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 522 - 653
Target Start/End: Original strand, 67865 - 67996
Alignment:
Q  522 attacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagacata 621  Q
    |||||||||  ||||||| || ||||| |||||||||||  ||| |||||||||| |  |||||||  |||| |||||||||||||    ||||||||||    
T  67865 attacatgatctgatagaagacatgggaaaagaaattgtcagactagaatcaccatatcagcctggagaacgcagtagattatggtcatctaaagacata 67964  T
Q  622 gtccaagttttagaagaaaatttggtgagtaa 653  Q
    ||  |||||||||| ||||||  |||||||||    
T  67965 gttgaagttttagaggaaaatacggtgagtaa 67996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 523 - 653
Target Start/End: Original strand, 32519 - 32649
Alignment:
Q  523 ttacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagacatag 622  Q
    ||||||||  ||||||| || ||||| |||||||||||  ||| |||||||||| |  |||||||  |||| |||||||||||||    |||||||||||    
T  32519 ttacatgatctgatagaagatatgggaaaagaaattgtcagactagaatcaccatatcagcctggagaacgcagtagattatggtctgttaaagacatag 32618  T
Q  623 tccaagttttagaagaaaatttggtgagtaa 653  Q
    |  ||||||| || ||||||  |||||||||    
T  32619 ttgaagttttggaggaaaatacggtgagtaa 32649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 523 - 653
Target Start/End: Original strand, 37268 - 37398
Alignment:
Q  523 ttacatgacttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgggaaacggagtagattatggttccataaagacatag 622  Q
    ||||||||  ||||||| || ||||| |||||||||||  ||| |||||||||| |  |||||||  |||| |||||||||||||    |||||||||||    
T  37268 ttacatgatctgatagaagatatgggaaaagaaattgtcagactagaatcaccatatcagcctggagaacgcagtagattatggtctgttaaagacatag 37367  T
Q  623 tccaagttttagaagaaaatttggtgagtaa 653  Q
    |  ||||||| || ||||||  |||||||||    
T  37368 ttgaagttttggaggaaaatacggtgagtaa 37398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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