View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14307_high_21 (Length: 491)
Name: NF14307_high_21
Description: NF14307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14307_high_21 |
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Alignment Details
Target: chr8 (Bit Score: 475; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 475; E-Value: 0
Query Start/End: Original strand, 2 - 484
Target Start/End: Original strand, 28757919 - 28758401
Alignment:
| Q |
2 |
cataaacaaaagcaagtaaataatagttcaaattacggaaacagatgatagatctacctaacatttctgattaacatagtatcatcaagactaatctcat |
101 |
Q |
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| T |
28757919 |
cataaacataagcaagtaaataatagttcaaattacggaaacagatgatagatctacctaacatttctgattaacatagtatcatcaagactaatctcat |
28758018 |
T |
|
| Q |
102 |
aacgtaattctattctgctattgtttaaacatcatcagcacaatagtaacaatctggaactcctgtgtaacagaagatcttgtgctcaatagtcaacaaa |
201 |
Q |
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| T |
28758019 |
aacgtaattctattctgctattgtttaaacatcatcagcacaatagtaacaatctggaactcctgtgtaacagaagatcttgtgctcaatagtcaacaaa |
28758118 |
T |
|
| Q |
202 |
ggataatcaacctaaaaaagaagcaataaaagagaggaaaaaagtaatgctattgacatagatgtcattgccaagcatggaatcaattgctttagttaat |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28758119 |
ggataatcaacctaaaaaagaagcaataaaagagaggaaaaaagtaatgctattgacatagatgtcattgccaagcatggaatcaattgctttagttaat |
28758218 |
T |
|
| Q |
302 |
ttaattttattactgaattgaggaccttaagtcaaattatgaacttactttagtgcataactttaccctctatcataaagaaacacttaaaaaattgatt |
401 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
28758219 |
ttaattttattactgaattgaggaccttaagtcaaattatgaacttactttagtgcataacattaccctctatcataaagaaacacttaaaaaattgatt |
28758318 |
T |
|
| Q |
402 |
gccaaagcaaaatttcaacctttttatatctgactagtacaattagaattcacaaggaggagaaaatacaagccagaataatc |
484 |
Q |
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| T |
28758319 |
gccaaagcaaaatttcaacctttttatatctgactagtacaattagaattcacaaggaggagaaaatacaagccagaataatc |
28758401 |
T |
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