View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14307_high_41 (Length: 415)
Name: NF14307_high_41
Description: NF14307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14307_high_41 |
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Alignment Details
Target: chr2 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 32 - 334
Target Start/End: Original strand, 8085628 - 8085933
Alignment:
| Q |
32 |
attgtggatttaaagacctaaagtctaagtgata---ctatgtagtagacctcgcctatattattggtgagtcaaagaaccactatatcaaatataaaaa |
128 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8085628 |
attgtggatttaaagacctaaagtctaagtgatagtactatgtagtagacctcacctatattattggtgagtcaaagaaccactatatcaaatataaaaa |
8085727 |
T |
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| Q |
129 |
gaacgttcatttacacggtttagaagatcactgtatgattattaacttggtcatggtttcaatataagattatgatgttttttattgataaaactatcac |
228 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8085728 |
gaacgttcatttacacggtttagaagatcactgaatgattattaacttggtcatggtttcaatataagattatgatgttttttattgataaaactatcac |
8085827 |
T |
|
| Q |
229 |
ctacgatatattaattgcagtaccatattgaatatattaaaataaaaagtagtgtaatgcaagaaaacccaaagaaacaaccatgtgtccaacaacgatt |
328 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
8085828 |
ctactatatattaattgcagtaccatattgaatatattaaaataaaaagtagtgtaatgcaagaaaacccaaagaaacaaccatgtgtacaacaacgatt |
8085927 |
T |
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| Q |
329 |
atctca |
334 |
Q |
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|||||| |
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| T |
8085928 |
atctca |
8085933 |
T |
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