View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14307_high_54 (Length: 355)
Name: NF14307_high_54
Description: NF14307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14307_high_54 |
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Alignment Details
Target: chr3 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 18 - 341
Target Start/End: Original strand, 32643650 - 32643974
Alignment:
| Q |
18 |
acatttacac-aagaaagtgtcatcttcaatgatttcactcttggtttccaggatgctagggttagctcccaatggaataccaagaaacataaagaaaac |
116 |
Q |
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| T |
32643650 |
acatttacaccaagaaagtctcatcttcaatgatttcactattggtttccaggatgctagggttagctcccaatggaataccaagaaacataaagaaaac |
32643749 |
T |
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| Q |
117 |
catatgtgtatagtgcatgaaaggaaatgggaatttgcctccataaacgaattttccaagtttagaccaaaagcttgcttttaataaagaaatttacctt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32643750 |
catatgtgtatagtgcatgaaaggaaatgggaatttgcctccataaacgaattttccaagtttagaccaaaagcttgcttttaataaagaaatttacctt |
32643849 |
T |
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| Q |
217 |
caattccgataccatttcgaagcttctgaatactgatttgataatccataggttctcccatgtgctctcccccaataaaattgtatcatccacgtattgg |
316 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
32643850 |
caattccgataccatttcgaagcttctgaatactgatttgatactccatagattctcccatgtgctctcccccaataaaattgtatcatcaacgtattgg |
32643949 |
T |
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| Q |
317 |
agagtgccgaattttaagtcctatg |
341 |
Q |
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||| ||||||||||||||||||||| |
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| T |
32643950 |
agaatgccgaattttaagtcctatg |
32643974 |
T |
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