View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14307_high_58 (Length: 343)
Name: NF14307_high_58
Description: NF14307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14307_high_58 |
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Alignment Details
Target: chr7 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 42093019 - 42092690
Alignment:
| Q |
1 |
aatgagacagcataaatatcaagcaaggacaaattataataataataaaaacaaatgtgcctcttcaaatttgagttcagtatattttctattttgtgca |
100 |
Q |
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| T |
42093019 |
aatgagacagcataaatatcaagcaaggacaaattataataataataaaaacaaatgtgcctcttcaaatttgagttcagtattttttctattatgtgca |
42092920 |
T |
|
| Q |
101 |
aaccatcttaatacgataataactcaactctataaaaaggacttgcatggttagagttgttgaaaggtattaataatggtgtccaacaaatttaagacgg |
200 |
Q |
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| T |
42092919 |
aaccatcttaatacgataataactcaactctataaaaaggacttgcatggttagagttgttgaaaggtattaataatggtgtccaacaaatttaagacag |
42092820 |
T |
|
| Q |
201 |
actttgtaccatcataaaaattaattaatttaagccacaatcctat---aaaaaccatttgtatggtgaattatgtcccacttat-aattactagtcata |
296 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
42092819 |
actttgtaccatcataaaaatt----aatttaagccacaatcctataaaaaaaaccatttgtatggtgaattatgtcccacttataaattactagtcata |
42092724 |
T |
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| Q |
297 |
c----tatattattgtactacattggactcttaa |
326 |
Q |
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| ||||||||||||||||||||||||||||| |
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| T |
42092723 |
ctatatatattattgtactacattggactcttaa |
42092690 |
T |
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