View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14307_high_64 (Length: 329)
Name: NF14307_high_64
Description: NF14307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14307_high_64 |
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Alignment Details
Target: chr2 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 18 - 319
Target Start/End: Complemental strand, 44868046 - 44867745
Alignment:
| Q |
18 |
aaacatatataaatcaaataagttgaaatgactatctttgttaatcggtcatcatnnnnnnnnntcggataggaatgtttttcaaaactctaattctcat |
117 |
Q |
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| T |
44868046 |
aaacatatataaatcaaataagttgaaatgacaatctttgttaatcggtcatcataaaaaaaaatcggataggaatgtttttcaaaactctaattctcat |
44867947 |
T |
|
| Q |
118 |
aattgcagttattgtataatttttacttcaactgtgtaaatagaatttttcttttaaccctctaatttttaggagaatgtgacctaataatctaaagttg |
217 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44867946 |
aattgcagttattgtataatttttacttcaactatgtaaatagaatttttcttttaaccctctaatttttaggagaatgtgacctaataatctaaagttg |
44867847 |
T |
|
| Q |
218 |
gatgataaataaaatatggccaaagatatctatgtttgtaggttttagtacgctttaaccaataataaacaaactttgtttttaagttgctttttcccta |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44867846 |
gatgataaataaaatatggccaaagatatctatgtttgtaggttttagtacgctttaaccaataataaacaaactttgtttttaagttgctttttcccta |
44867747 |
T |
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| Q |
318 |
tg |
319 |
Q |
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|| |
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| T |
44867746 |
tg |
44867745 |
T |
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