View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14307_low_103 (Length: 239)
Name: NF14307_low_103
Description: NF14307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14307_low_103 |
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Alignment Details
Target: chr8 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 2097944 - 2098129
Alignment:
| Q |
17 |
aaaactgttgtatcttttcaatcatgatttcgtacttttatactagtacttctgtgtcgtcctccaattaaaaaacaaatactccattattagggtatct |
116 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
2097944 |
aaaactgttgtatcttttcattcatgatttcgtacttttatactagtacttctgtgtcgtcctccaattataaaacaaatactccattattagggtatct |
2098043 |
T |
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| Q |
117 |
ccaacccgtggtattacattaccaggaaagtcaccaacacgggaacaccaaacacgctgattataacctaccgccaactttctaat |
202 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |
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| T |
2098044 |
ccaacccgtggtattacattacgaggaaagtcaccaacacgggaacaccaaacacgctgattataacctatcgccaactttataat |
2098129 |
T |
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