View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14307_low_37 (Length: 438)
Name: NF14307_low_37
Description: NF14307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14307_low_37 |
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Alignment Details
Target: chr8 (Bit Score: 344; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 19 - 431
Target Start/End: Complemental strand, 29116737 - 29116323
Alignment:
| Q |
19 |
gattttggcttctccacgaatctactcacaatgcttacactatatgtcaaatatggctttgtgttgcaaaggtatcttcgatgatccaataagtcttttg |
118 |
Q |
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| T |
29116737 |
gattttggcttctccaggaatctactcacaatgcctacactatatgtcaaatatggctttgtgttgcaaaggtatcttcgatgatccaatgagtcttttg |
29116638 |
T |
|
| Q |
119 |
tattgagttggatccacttctctctcttttatttcatttcatagttttggtcttggttcaatgggggttacatcaagatttcaatactccatctaaaacc |
218 |
Q |
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| T |
29116637 |
tattgagttggatccacttctttctcttttatttcttttgatagttttggtcttggttcaataggggttacatcaagattgcaatattccatctaaaacc |
29116538 |
T |
|
| Q |
219 |
ttttaagaatttcactagc--atatctcttttgatgaattagaagccctacttgttctttgaaactccatggcaaggaaatatgagatgtgaagtagatc |
316 |
Q |
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| T |
29116537 |
ttttaagaatttcactagcatatatctcttttgatgaattagaagccctacttgttctttgaaactccatgcgaaggaaatatgaaatgtgacctagatc |
29116438 |
T |
|
| Q |
317 |
aaccatctcaaattccttcatcaaatcattcttaaagtcgtttatgtaagatccattgctacatgtgataagaaaatcatttacataaagatatagaatg |
416 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29116437 |
aaccatctcaaattccttcatcaaatcattcttaaattcgtttatgtaagatccattgctacatgtgataagaaaatcatttacataaagatatagaatg |
29116338 |
T |
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| Q |
417 |
attacccctttgctt |
431 |
Q |
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||||||||||||||| |
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| T |
29116337 |
attacccctttgctt |
29116323 |
T |
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