View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14307_low_61 (Length: 345)
Name: NF14307_low_61
Description: NF14307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14307_low_61 |
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Alignment Details
Target: chr8 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 35334756 - 35335081
Alignment:
| Q |
1 |
aacaagaaactcaacaggattcaattgaatatgttagaagccaaacaatcatgtattcgaagcaaattgtcaacctccaaaactgaactaaannnnnnnc |
100 |
Q |
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| T |
35334756 |
aacaagaaactcaagaggattcaattgaatatgttagaagccaaacaatcatatattcgaagcaaattgtcaacctccaaaactgaactagaaaatttcc |
35334855 |
T |
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| Q |
101 |
atataagctatgaagtttagttacgtaattctgatacgaatacgatgcgacagtattaagtggataagaaaaacataaaattcaaattatatgatatcat |
200 |
Q |
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||||||||||| |||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||| |
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| T |
35334856 |
atataagctatcaagtttagatacgtacttctgatacgaatacgatgcgacacaattaagtggataagaaaaacataaaattcaaattatataacatcat |
35334955 |
T |
|
| Q |
201 |
tgtatgaacgaacttataatatacttctaagtaaacactcatagttcttcgttgatatataatcacaatttacaaaagacagtagttattcctactaaga |
300 |
Q |
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||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| | |
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| T |
35334956 |
tgtatgaacgaacgtataatatacttttaagtaaacactcatagttcttcgttgatatataatcacaatttacaaaagaca-tagtgattcctactaaaa |
35335054 |
T |
|
| Q |
301 |
aaaacaatataatcatgattataacat |
327 |
Q |
| |
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|||| |||||||||||||||||||||| |
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| T |
35335055 |
aaaaaaatataatcatgattataacat |
35335081 |
T |
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