View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14307_low_62 (Length: 343)
Name: NF14307_low_62
Description: NF14307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14307_low_62 |
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Alignment Details
Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 5214635 - 5214952
Alignment:
| Q |
1 |
tacattaaacatatgctattttgtacgtatttgaaatattaagtccacagaagaggaaattaaaattctcaaatttgttcaaaatcttggacgttgtatt |
100 |
Q |
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| T |
5214635 |
tacattaaacatatgctattttgtacgtatttgaaatattaagtccacagaagaggaaattaaaattctcaaatttgttcaaaatcttggacgttgtatt |
5214734 |
T |
|
| Q |
101 |
tccaacaacaaactaaaacaaggttacacaatcacaataacatgttcgttttcctttaactagaaagattagcatgcttttatgttacatctacgtgtcg |
200 |
Q |
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| T |
5214735 |
tccaacaacaaactaaaacaaggttacacaatcacaataacatgttcgttttcctttaactagaaagattagca----gttatgttacatctacgtgtcg |
5214830 |
T |
|
| Q |
201 |
ataaaaataaaatacaaataccaacatagtataacacaagtggtacatatttgagnnnnnnnaccatttggccatgaagttcaattctttgatcggtgcg |
300 |
Q |
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||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||| | |
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| T |
5214831 |
ataaaaataaaatacaaatgccaacatagtataacacaagt-ttacatatttgagtttttttaccatttagccatgaagttcaattctttgatcg----g |
5214925 |
T |
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| Q |
301 |
tgcgtaaggaaaaacatatgtcagaag |
327 |
Q |
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||||||||| ||||||||||||||||| |
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| T |
5214926 |
tgcgtaaggtaaaacatatgtcagaag |
5214952 |
T |
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