View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14307_low_71 (Length: 325)
Name: NF14307_low_71
Description: NF14307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14307_low_71 |
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Alignment Details
Target: chr4 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 18 - 309
Target Start/End: Original strand, 51807426 - 51807717
Alignment:
| Q |
18 |
gaatatacgaggtacgatccaacaagaccattaaaatgcagagcctgccactatactgaaaaccagatggctaagctccataagaaagcagcaacaattc |
117 |
Q |
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| T |
51807426 |
gaatatacgaggtacgatccaacaagaccattaaaaggcagagcctgccactatgctgaaaaccagatggctaagctccataagaaagcagcaacaattc |
51807525 |
T |
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| Q |
118 |
ataagatgtactttctaagttccattgataattggagcctatgtggctaaattaataagagattaacatattccttacactgccacaaaaccaatctgag |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
51807526 |
ataagatgtactttctaagttccattgataattggagcctatgtggctaaattaataagagattaacatattccttatactgccacaaaaccaatctgag |
51807625 |
T |
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| Q |
218 |
aaccgattttccaaattattatcacttccaaccccattccagattatcctgaattccaatagaatatttatctccagatacaagtgcactat |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51807626 |
aaccgattttccaaattattatcacttccaaccccattccagattatcctgaattccaatagaatatttatctccagatacaagtgcactat |
51807717 |
T |
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