View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14307_low_91 (Length: 257)
Name: NF14307_low_91
Description: NF14307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14307_low_91 |
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Alignment Details
Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 5679745 - 5679675
Alignment:
| Q |
7 |
gcattaaatttcaggtttgaaattcttgaaaacaaatcgagggttgctcgtaaaacaataaagtcgtcacc |
77 |
Q |
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| T |
5679745 |
gcattaaatttcaggtttgaaattcttgaaaacaaatcgagggttgctcgtaaaacaataaagtcgtcacc |
5679675 |
T |
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Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 5679624 - 5679551
Alignment:
| Q |
126 |
tatggttcttgaaacctgatttcgagttcggggattgattatgtgcaggaaaaatatttgcgttctacaacatt |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
5679624 |
tatggttcttgaaacctgatttcgagttcggggattgattatgtgcaggaaaaatatttgcgttctacagcatt |
5679551 |
T |
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