View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14308_high_10 (Length: 284)
Name: NF14308_high_10
Description: NF14308
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14308_high_10 |
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Alignment Details
Target: chr1 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 12 - 268
Target Start/End: Original strand, 51936849 - 51937095
Alignment:
| Q |
12 |
gaagaatatcgatatctgctacatgtacaaacggatgtgttccctatttggacttcatagataatgggataatgatctggttatggcctaaggttgtcct |
111 |
Q |
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| T |
51936849 |
gaagaatatcgatatctgctacatgtacaaacggatgtgttccctatttggacttcatagata--------atgatctggttatggcctaaggttgtcct |
51936940 |
T |
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| Q |
112 |
gacagaaaacctgcaatatgcatctacatgcagctggaatggataaagcaaaatttgatagcacaattgnnnnnnnnnnnnnnnnnntgtagtagaggtg |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |
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| T |
51936941 |
gacagaaaacctgcaatatgcatctacatgcagctggaatggataaagcacaatttgatagcacaattg--aaaaaaaaaataaaaatgtagtagaggtg |
51937038 |
T |
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| Q |
212 |
agactaattgaaaggaaatttctttgaaggactaattgaaagtaaattgttataagt |
268 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51937039 |
agactaattgaaaggaaatttctttgaaggactaattgaaagtaaattgttataagt |
51937095 |
T |
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