View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14308_high_11 (Length: 235)

Name: NF14308_high_11
Description: NF14308
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14308_high_11
NF14308_high_11
[»] chr3 (128 HSPs)
chr3 (68-235)||(26896549-26896716)
chr3 (25-71)||(12050392-12050438)
chr3 (25-66)||(25149122-25149163)
chr3 (1-62)||(10220933-10220994)
chr3 (25-64)||(7181348-7181387)
chr3 (25-64)||(22103929-22103968)
chr3 (25-64)||(37728711-37728750)
chr3 (25-64)||(44543780-44543819)
chr3 (25-64)||(51284062-51284101)
chr3 (25-63)||(35868083-35868121)
chr3 (25-63)||(43868102-43868140)
chr3 (25-62)||(9499497-9499534)
chr3 (25-62)||(14428610-14428647)
chr3 (25-62)||(21756486-21756523)
chr3 (25-62)||(26593765-26593802)
chr3 (25-62)||(45252773-45252810)
chr3 (25-62)||(46049986-46050023)
chr3 (26-62)||(4024052-4024088)
chr3 (29-65)||(14428873-14428909)
chr3 (25-65)||(24087335-24087375)
chr3 (1-62)||(36098966-36099027)
chr3 (25-64)||(4759351-4759390)
chr3 (25-64)||(7051720-7051759)
chr3 (29-64)||(20862461-20862496)
chr3 (25-64)||(26306607-26306646)
chr3 (29-64)||(26806113-26806148)
chr3 (25-64)||(41392880-41392919)
chr3 (29-64)||(50647682-50647717)
chr3 (25-64)||(53361855-53361894)
chr3 (29-67)||(4024315-4024353)
chr3 (25-63)||(20862195-20862233)
chr3 (25-63)||(22832607-22832645)
chr3 (25-63)||(23700785-23700823)
chr3 (25-63)||(23719240-23719278)
chr3 (25-63)||(23737696-23737734)
chr3 (25-63)||(26221287-26221325)
chr3 (25-63)||(32963105-32963143)
chr3 (25-63)||(33868447-33868485)
chr3 (29-63)||(33868712-33868746)
chr3 (29-71)||(36005768-36005810)
chr3 (25-63)||(43701177-43701215)
chr3 (25-63)||(46845492-46845530)
chr3 (25-62)||(8321925-8321962)
chr3 (29-62)||(9779979-9780012)
chr3 (1-63)||(10044841-10044903)
chr3 (25-62)||(12683182-12683219)
chr3 (29-62)||(16434977-16435010)
chr3 (25-62)||(26058546-26058583)
chr3 (29-62)||(31531415-31531448)
chr3 (29-66)||(36099228-36099265)
chr3 (28-65)||(42801518-42801555)
chr3 (25-62)||(46878439-46878476)
chr3 (25-62)||(47066934-47066971)
chr3 (25-62)||(50647944-50647981)
chr3 (25-62)||(50726783-50726820)
chr3 (25-62)||(50786028-50786065)
chr3 (29-62)||(52058985-52059018)
chr3 (25-62)||(54782917-54782954)
chr3 (25-65)||(1111648-1111688)
chr3 (28-64)||(10015792-10015828)
chr3 (1-62)||(16435212-16435273)
chr3 (28-64)||(19897839-19897875)
chr3 (25-57)||(20918224-20918256)
chr3 (25-57)||(20927186-20927218)
chr3 (25-65)||(28673294-28673334)
chr3 (25-57)||(46703032-46703064)
chr3 (25-56)||(1572337-1572368)
chr3 (25-64)||(10656689-10656728)
chr3 (25-64)||(17699031-17699070)
chr3 (28-63)||(28875254-28875289)
chr3 (25-64)||(30819876-30819915)
chr3 (28-63)||(32978743-32978778)
chr3 (2-62)||(33212397-33212457)
chr3 (26-57)||(44542474-44542505)
chr3 (25-64)||(48909870-48909909)
chr3 (25-56)||(51489373-51489404)
chr3 (28-62)||(4759088-4759122)
chr3 (28-62)||(9780244-9780278)
chr3 (28-62)||(15996776-15996810)
chr3 (29-63)||(17591284-17591318)
chr3 (28-66)||(20621421-20621459)
chr3 (25-55)||(25148466-25148496)
chr3 (25-63)||(32467424-32467462)
chr3 (25-63)||(32568996-32569034)
chr3 (28-62)||(32978481-32978515)
chr3 (25-63)||(43978159-43978197)
chr3 (28-62)||(45513640-45513674)
chr3 (25-55)||(46862366-46862396)
chr3 (30-64)||(48904268-48904302)
chr3 (25-55)||(49543684-49543714)
chr3 (25-63)||(50433389-50433427)
chr3 (25-63)||(52177799-52177837)
chr3 (28-62)||(53361594-53361628)
chr3 (28-62)||(54604591-54604625)
chr3 (25-62)||(6784463-6784500)
chr3 (25-62)||(7251282-7251319)
chr3 (25-62)||(8503505-8503542)
chr3 (28-65)||(8547168-8547205)
chr3 (25-62)||(9582243-9582280)
chr3 (30-63)||(12906418-12906451)
chr3 (28-57)||(14758843-14758872)
chr3 (25-62)||(15095198-15095235)
chr3 (25-62)||(21458982-21459019)
chr3 (29-66)||(21756751-21756788)
chr3 (25-62)||(27646306-27646343)
chr3 (26-63)||(29454787-29454824)
chr3 (25-62)||(29719710-29719747)
chr3 (25-62)||(30041017-30041054)
chr3 (25-62)||(35165962-35165999)
chr3 (25-62)||(47008502-47008539)
chr3 (25-58)||(49127198-49127231)
chr3 (25-62)||(50517522-50517559)
chr3 (29-62)||(51283802-51283835)
chr3 (25-62)||(52673187-52673224)
chr3 (25-62)||(53164163-53164200)
chr3 (28-56)||(6784726-6784754)
chr3 (29-65)||(7251018-7251054)
chr3 (25-57)||(8546909-8546941)
chr3 (30-62)||(9795240-9795272)
chr3 (29-65)||(20656046-20656082)
chr3 (25-65)||(22527621-22527661)
chr3 (26-62)||(26806379-26806415)
chr3 (28-64)||(27687984-27688020)
chr3 (25-57)||(33976508-33976540)
chr3 (28-68)||(43686765-43686805)
chr3 (28-64)||(45745776-45745812)
chr3 (29-65)||(46703292-46703328)
chr3 (1-62)||(49383344-49383405)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-63)||(12064-12126)
scaffold0122 (29-65)||(12328-12364)
[»] chr2 (85 HSPs)
chr2 (25-66)||(34883848-34883889)
chr2 (25-65)||(11201680-11201720)
chr2 (1-65)||(25624730-25624794)
chr2 (25-68)||(41450510-41450553)
chr2 (25-63)||(20252209-20252247)
chr2 (25-63)||(34062665-34062703)
chr2 (25-63)||(40607701-40607739)
chr2 (25-62)||(2438225-2438262)
chr2 (25-62)||(7491844-7491881)
chr2 (25-62)||(8716892-8716929)
chr2 (1-63)||(16845048-16845110)
chr2 (25-62)||(17408294-17408331)
chr2 (25-62)||(27560206-27560243)
chr2 (25-62)||(36131028-36131065)
chr2 (29-69)||(7492108-7492148)
chr2 (25-65)||(22897388-22897428)
chr2 (3-63)||(4711727-4711787)
chr2 (25-64)||(5664636-5664675)
chr2 (25-64)||(15228149-15228188)
chr2 (30-65)||(22182929-22182964)
chr2 (25-63)||(8841657-8841695)
chr2 (29-63)||(16108214-16108248)
chr2 (25-63)||(16805791-16805829)
chr2 (25-63)||(26322293-26322331)
chr2 (25-63)||(34113530-34113568)
chr2 (28-62)||(34113789-34113823)
chr2 (29-63)||(39833738-39833772)
chr2 (25-63)||(40680726-40680764)
chr2 (1-64)||(44573858-44573921)
chr2 (25-62)||(2060316-2060353)
chr2 (29-62)||(2438489-2438522)
chr2 (25-62)||(7116299-7116336)
chr2 (25-62)||(8912874-8912911)
chr2 (28-65)||(12890211-12890248)
chr2 (25-70)||(13197645-13197690)
chr2 (30-79)||(18374412-18374461)
chr2 (29-62)||(22897655-22897688)
chr2 (25-62)||(23788969-23789006)
chr2 (25-62)||(28566151-28566188)
chr2 (1-55)||(28840646-28840700)
chr2 (29-62)||(45474351-45474384)
chr2 (28-60)||(42629373-42629405)
chr2 (2-62)||(11852162-11852222)
chr2 (28-63)||(15227889-15227924)
chr2 (28-63)||(41422511-41422546)
chr2 (28-63)||(41494625-41494660)
chr2 (29-63)||(1360055-1360089)
chr2 (28-62)||(2200243-2200277)
chr2 (28-62)||(3095299-3095333)
chr2 (30-64)||(8841395-8841429)
chr2 (25-63)||(8990203-8990241)
chr2 (29-63)||(10757773-10757807)
chr2 (25-63)||(11865289-11865327)
chr2 (1-64)||(12360455-12360518)
chr2 (25-55)||(16456872-16456902)
chr2 (28-62)||(18374707-18374741)
chr2 (28-62)||(24345681-24345715)
chr2 (29-63)||(31751068-31751102)
chr2 (28-62)||(32120944-32120978)
chr2 (25-62)||(1359791-1359828)
chr2 (25-66)||(1859543-1859584)
chr2 (30-63)||(2199977-2200010)
chr2 (26-63)||(6027617-6027654)
chr2 (25-62)||(10399462-10399499)
chr2 (25-62)||(10757979-10758015)
chr2 (29-62)||(11201947-11201980)
chr2 (25-62)||(15404707-15404744)
chr2 (25-62)||(16108475-16108512)
chr2 (30-59)||(16456615-16456644)
chr2 (25-62)||(16669626-16669663)
chr2 (29-62)||(17408034-17408067)
chr2 (25-62)||(18970729-18970766)
chr2 (30-63)||(23083514-23083547)
chr2 (25-62)||(24345417-24345454)
chr2 (25-62)||(26334845-26334882)
chr2 (29-62)||(29239333-29239366)
chr2 (25-62)||(37229440-37229477)
chr2 (25-62)||(39833999-39834036)
chr2 (25-62)||(44436821-44436858)
chr2 (30-62)||(13215825-13215857)
chr2 (25-69)||(17665516-17665560)
chr2 (25-65)||(24300351-24300391)
chr2 (25-57)||(30466110-30466142)
chr2 (25-57)||(31633848-31633880)
chr2 (25-57)||(41968202-41968234)
[»] scaffold0604 (2 HSPs)
scaffold0604 (1-62)||(3758-3819)
scaffold0604 (28-62)||(3525-3559)
[»] scaffold0008 (1 HSPs)
scaffold0008 (25-65)||(259122-259162)
[»] chr7 (64 HSPs)
chr7 (1-62)||(26255096-26255157)
chr7 (25-64)||(32814431-32814470)
chr7 (25-64)||(33858866-33858905)
chr7 (25-64)||(39871613-39871652)
chr7 (25-63)||(29286037-29286075)
chr7 (1-64)||(34012493-34012556)
chr7 (25-67)||(36646637-36646679)
chr7 (25-63)||(36698131-36698169)
chr7 (25-63)||(38858297-38858335)
chr7 (25-62)||(19920563-19920600)
chr7 (25-62)||(21295151-21295188)
chr7 (25-62)||(32872375-32872412)
chr7 (25-62)||(39197718-39197755)
chr7 (25-62)||(41026096-41026133)
chr7 (25-62)||(41252361-41252398)
chr7 (25-62)||(48521029-48521066)
chr7 (1-62)||(7449270-7449331)
chr7 (1-62)||(25247666-25247727)
chr7 (26-66)||(33381574-33381614)
chr7 (26-62)||(40300230-40300266)
chr7 (25-63)||(2290016-2290054)
chr7 (29-63)||(20075111-20075145)
chr7 (1-72)||(25950821-25950892)
chr7 (29-63)||(28060981-28061015)
chr7 (25-63)||(29177252-29177290)
chr7 (25-63)||(34979077-34979115)
chr7 (25-63)||(44547425-44547463)
chr7 (25-66)||(6387321-6387362)
chr7 (1-55)||(26299323-26299377)
chr7 (25-62)||(31457997-31458034)
chr7 (25-62)||(36711298-36711335)
chr7 (29-62)||(38428411-38428444)
chr7 (25-62)||(41003154-41003191)
chr7 (28-65)||(45907242-45907279)
chr7 (25-65)||(9140533-9140573)
chr7 (1-62)||(19292839-19292900)
chr7 (2-55)||(28016522-28016575)
chr7 (25-57)||(31769332-31769364)
chr7 (1-62)||(32118139-32118200)
chr7 (30-66)||(42541864-42541900)
chr7 (25-64)||(12616383-12616422)
chr7 (25-64)||(12930316-12930355)
chr7 (28-63)||(27813495-27813530)
chr7 (25-64)||(39135093-39135132)
chr7 (28-62)||(1275736-1275770)
chr7 (25-55)||(11647834-11647864)
chr7 (28-62)||(18113169-18113203)
chr7 (29-63)||(29176991-29177025)
chr7 (28-62)||(31581677-31581711)
chr7 (28-62)||(44510346-44510380)
chr7 (25-63)||(46415005-46415043)
chr7 (30-63)||(1574718-1574751)
chr7 (25-62)||(18751982-18752019)
chr7 (25-62)||(19845669-19845706)
chr7 (25-62)||(21119557-21119594)
chr7 (25-62)||(28060717-28060754)
chr7 (25-62)||(29643143-29643180)
chr7 (25-62)||(32643757-32643794)
chr7 (28-65)||(32759820-32759857)
chr7 (25-54)||(41803471-41803500)
chr7 (25-62)||(43093409-43093446)
chr7 (25-57)||(17317446-17317478)
chr7 (28-64)||(22991747-22991783)
chr7 (1-62)||(27529229-27529290)
[»] chr6 (55 HSPs)
chr6 (1-62)||(231081-231142)
chr6 (1-62)||(8743188-8743249)
chr6 (25-63)||(4844399-4844437)
chr6 (25-63)||(30248646-30248684)
chr6 (25-71)||(34915543-34915589)
chr6 (25-74)||(25045643-25045692)
chr6 (25-62)||(34301832-34301869)
chr6 (25-65)||(25197149-25197189)
chr6 (25-64)||(15498627-15498666)
chr6 (28-71)||(16122517-16122560)
chr6 (1-57)||(17227503-17227559)
chr6 (25-64)||(19097801-19097840)
chr6 (27-62)||(23398141-23398176)
chr6 (25-63)||(402621-402659)
chr6 (25-63)||(5457411-5457449)
chr6 (28-62)||(9038642-9038676)
chr6 (25-63)||(9388791-9388829)
chr6 (28-62)||(11847835-11847869)
chr6 (30-64)||(12144043-12144077)
chr6 (25-63)||(13901640-13901678)
chr6 (25-63)||(23604459-23604497)
chr6 (29-63)||(34741730-34741764)
chr6 (25-62)||(287414-287451)
chr6 (25-62)||(925933-925970)
chr6 (25-62)||(2090658-2090695)
chr6 (29-62)||(9388529-9388562)
chr6 (25-62)||(10195993-10196030)
chr6 (25-66)||(11200590-11200631)
chr6 (28-65)||(16272971-16273008)
chr6 (29-66)||(23397875-23397912)
chr6 (25-62)||(33487833-33487870)
chr6 (28-64)||(13321329-13321365)
chr6 (26-62)||(13648130-13648166)
chr6 (1-62)||(29036126-29036187)
chr6 (25-64)||(7772174-7772213)
chr6 (25-64)||(7847308-7847347)
chr6 (25-56)||(8637275-8637306)
chr6 (28-63)||(13647867-13647902)
chr6 (28-62)||(1730104-1730138)
chr6 (25-59)||(6147386-6147420)
chr6 (25-63)||(9341837-9341875)
chr6 (30-64)||(12143777-12143811)
chr6 (25-63)||(27581386-27581424)
chr6 (28-62)||(31091445-31091479)
chr6 (25-62)||(1147267-1147304)
chr6 (29-62)||(1779784-1779817)
chr6 (29-62)||(6418135-6418168)
chr6 (25-66)||(11161847-11161888)
chr6 (25-62)||(12106064-12106101)
chr6 (29-62)||(13866593-13866626)
chr6 (28-65)||(13866857-13866894)
chr6 (25-62)||(23282805-23282842)
chr6 (25-62)||(32614989-32615026)
chr6 (25-57)||(14629908-14629940)
chr6 (28-64)||(15498891-15498927)
[»] chr5 (62 HSPs)
chr5 (25-65)||(16127256-16127296)
chr5 (25-63)||(6673228-6673266)
chr5 (25-63)||(14913647-14913685)
chr5 (25-63)||(22527691-22527729)
chr5 (25-63)||(26894873-26894911)
chr5 (25-63)||(40004409-40004447)
chr5 (25-62)||(1265949-1265986)
chr5 (28-65)||(9020691-9020728)
chr5 (25-62)||(9828393-9828430)
chr5 (1-63)||(32147293-32147355)
chr5 (26-63)||(34662203-34662240)
chr5 (26-62)||(7951562-7951598)
chr5 (25-65)||(8949809-8949849)
chr5 (25-64)||(16153255-16153294)
chr5 (29-63)||(186362-186396)
chr5 (25-63)||(3028012-3028050)
chr5 (28-62)||(10734526-10734560)
chr5 (25-63)||(15190815-15190853)
chr5 (25-63)||(15521942-15521980)
chr5 (25-63)||(16440930-16440968)
chr5 (25-63)||(23260138-23260176)
chr5 (25-63)||(25601060-25601098)
chr5 (25-63)||(41384172-41384210)
chr5 (25-71)||(41641086-41641132)
chr5 (25-62)||(3497800-3497837)
chr5 (29-62)||(9828657-9828690)
chr5 (25-62)||(13862995-13863032)
chr5 (25-66)||(21239095-21239136)
chr5 (25-62)||(23286474-23286511)
chr5 (25-66)||(28041351-28041392)
chr5 (29-66)||(32147555-32147592)
chr5 (25-62)||(43060411-43060448)
chr5 (1-62)||(11780764-11780825)
chr5 (26-62)||(19571940-19571976)
chr5 (29-64)||(3497538-3497573)
chr5 (28-63)||(7940451-7940486)
chr5 (28-63)||(14435829-14435864)
chr5 (25-64)||(16926450-16926489)
chr5 (28-63)||(26889592-26889627)
chr5 (25-56)||(27873345-27873376)
chr5 (25-56)||(32478144-32478175)
chr5 (29-64)||(41383910-41383945)
chr5 (25-63)||(3686754-3686792)
chr5 (25-59)||(4753218-4753252)
chr5 (28-62)||(4976293-4976327)
chr5 (25-63)||(13759447-13759485)
chr5 (29-63)||(16127523-16127557)
chr5 (29-63)||(20142263-20142297)
chr5 (25-63)||(22657767-22657805)
chr5 (1-64)||(31657683-31657746)
chr5 (25-63)||(40643093-40643131)
chr5 (25-62)||(5527974-5528011)
chr5 (30-71)||(9978623-9978664)
chr5 (25-62)||(13660861-13660898)
chr5 (30-63)||(13661124-13661157)
chr5 (25-62)||(14619249-14619286)
chr5 (26-63)||(32964132-32964169)
chr5 (29-65)||(3686490-3686526)
chr5 (28-64)||(4194942-4194978)
chr5 (29-65)||(15521678-15521714)
chr5 (28-64)||(24857554-24857590)
chr5 (1-62)||(41687088-41687149)
[»] chr4 (97 HSPs)
chr4 (25-65)||(45742806-45742846)
chr4 (25-63)||(4035824-4035862)
chr4 (1-64)||(17609996-17610059)
chr4 (25-62)||(5375557-5375594)
chr4 (25-62)||(5743659-5743696)
chr4 (25-62)||(9328240-9328277)
chr4 (1-63)||(20455157-20455219)
chr4 (25-62)||(30771528-30771565)
chr4 (25-62)||(32032993-32033030)
chr4 (25-62)||(33413518-33413555)
chr4 (25-62)||(34273219-34273256)
chr4 (25-62)||(44294789-44294826)
chr4 (25-62)||(47806860-47806897)
chr4 (25-66)||(48030309-48030350)
chr4 (25-62)||(52977982-52978019)
chr4 (25-65)||(6807426-6807466)
chr4 (1-62)||(15241480-15241541)
chr4 (1-62)||(20391413-20391474)
chr4 (29-65)||(20747434-20747470)
chr4 (1-62)||(25708654-25708715)
chr4 (26-62)||(26626003-26626039)
chr4 (25-65)||(36391851-36391891)
chr4 (25-65)||(45097165-45097205)
chr4 (25-65)||(49793088-49793128)
chr4 (1-62)||(53277161-53277222)
chr4 (25-65)||(56432515-56432555)
chr4 (25-64)||(2615945-2615984)
chr4 (25-64)||(52870642-52870681)
chr4 (25-63)||(4415964-4416002)
chr4 (25-63)||(24754077-24754115)
chr4 (25-63)||(28501386-28501424)
chr4 (28-62)||(35675923-35675957)
chr4 (25-63)||(46949991-46950029)
chr4 (25-62)||(1859144-1859181)
chr4 (29-62)||(4036089-4036122)
chr4 (29-62)||(4549629-4549662)
chr4 (25-62)||(6753525-6753562)
chr4 (25-62)||(25124246-25124283)
chr4 (29-62)||(29014064-29014097)
chr4 (25-62)||(29520164-29520201)
chr4 (25-62)||(31937076-31937113)
chr4 (26-63)||(32899219-32899256)
chr4 (1-59)||(37352547-37352605)
chr4 (1-59)||(37357446-37357504)
chr4 (25-62)||(43387993-43388030)
chr4 (25-62)||(47228728-47228765)
chr4 (25-62)||(49373693-49373730)
chr4 (25-62)||(53564356-53564393)
chr4 (25-62)||(53629792-53629829)
chr4 (29-62)||(55631999-55632032)
chr4 (1-62)||(10588075-10588136)
chr4 (28-68)||(18872711-18872751)
chr4 (25-57)||(41620519-41620551)
chr4 (26-62)||(55563128-55563164)
chr4 (28-63)||(1028517-1028552)
chr4 (31-62)||(25708420-25708451)
chr4 (25-64)||(28298371-28298410)
chr4 (28-63)||(49228721-49228756)
chr4 (29-72)||(51536432-51536475)
chr4 (25-60)||(54676549-54676584)
chr4 (26-64)||(375422-375460)
chr4 (25-59)||(4549889-4549923)
chr4 (29-71)||(5743390-5743432)
chr4 (28-62)||(7698472-7698506)
chr4 (28-62)||(26625743-26625777)
chr4 (25-55)||(30868801-30868831)
chr4 (28-62)||(39670989-39671023)
chr4 (25-63)||(41191628-41191666)
chr4 (27-65)||(42528595-42528633)
chr4 (25-59)||(50424854-50424888)
chr4 (25-55)||(55876387-55876417)
chr4 (29-62)||(2615683-2615716)
chr4 (25-62)||(4455060-4455097)
chr4 (25-62)||(17339078-17339115)
chr4 (25-62)||(19282081-19282118)
chr4 (30-63)||(21265219-21265252)
chr4 (25-62)||(26866863-26866900)
chr4 (30-63)||(30523763-30523796)
chr4 (25-62)||(39144404-39144441)
chr4 (25-62)||(50352064-50352101)
chr4 (25-62)||(50533884-50533921)
chr4 (29-66)||(54676813-54676850)
chr4 (25-62)||(55632259-55632296)
chr4 (25-57)||(468505-468537)
chr4 (25-65)||(8343905-8343945)
chr4 (25-65)||(18882348-18882388)
chr4 (28-64)||(26889902-26889938)
chr4 (31-63)||(29508597-29508629)
chr4 (28-64)||(30050087-30050123)
chr4 (29-65)||(34272955-34272991)
chr4 (26-62)||(36130091-36130127)
chr4 (26-62)||(36901111-36901147)
chr4 (26-62)||(37173833-37173869)
chr4 (26-62)||(37518004-37518040)
chr4 (26-62)||(37522220-37522256)
chr4 (29-61)||(53630056-53630088)
chr4 (25-57)||(54623806-54623838)
[»] scaffold0025 (2 HSPs)
scaffold0025 (1-65)||(65613-65677)
scaffold0025 (29-62)||(65378-65411)
[»] chr8 (86 HSPs)
chr8 (25-64)||(13153926-13153965)
chr8 (25-64)||(28572044-28572083)
chr8 (25-64)||(28579637-28579676)
chr8 (25-64)||(34568488-34568527)
chr8 (25-63)||(8251933-8251971)
chr8 (25-63)||(18754143-18754181)
chr8 (25-63)||(32675757-32675795)
chr8 (25-62)||(51095-51132)
chr8 (25-62)||(1774342-1774379)
chr8 (25-62)||(2944272-2944309)
chr8 (25-62)||(8951428-8951465)
chr8 (1-63)||(17856752-17856814)
chr8 (25-62)||(28192175-28192212)
chr8 (25-62)||(39029178-39029215)
chr8 (29-66)||(44250855-44250892)
chr8 (28-63)||(26016568-26016603)
chr8 (25-63)||(2152240-2152278)
chr8 (25-63)||(5593420-5593458)
chr8 (25-63)||(12802610-12802648)
chr8 (29-63)||(29279460-29279494)
chr8 (25-63)||(29598223-29598261)
chr8 (28-66)||(39029439-39029477)
chr8 (25-63)||(40529306-40529344)
chr8 (29-63)||(40530410-40530444)
chr8 (1-64)||(40784889-40784952)
chr8 (28-62)||(42885054-42885088)
chr8 (25-63)||(43654203-43654241)
chr8 (25-62)||(5162304-5162341)
chr8 (25-62)||(7758909-7758946)
chr8 (25-62)||(8948351-8948388)
chr8 (25-62)||(9035539-9035576)
chr8 (25-62)||(11798605-11798642)
chr8 (29-62)||(11798869-11798902)
chr8 (29-62)||(13154192-13154225)
chr8 (25-62)||(17069844-17069881)
chr8 (25-62)||(17578392-17578429)
chr8 (25-62)||(18455720-18455757)
chr8 (25-62)||(18641380-18641417)
chr8 (1-63)||(29806198-29806260)
chr8 (25-66)||(34490513-34490554)
chr8 (25-62)||(36177103-36177140)
chr8 (25-62)||(38878721-38878758)
chr8 (25-62)||(40741265-40741302)
chr8 (29-62)||(43653943-43653976)
chr8 (25-62)||(44251121-44251158)
chr8 (28-64)||(23688168-23688204)
chr8 (28-64)||(26016831-26016867)
chr8 (26-62)||(44502620-44502656)
chr8 (30-73)||(2944002-2944045)
chr8 (25-64)||(4631555-4631594)
chr8 (25-64)||(5774046-5774085)
chr8 (27-62)||(6050557-6050592)
chr8 (25-64)||(14584131-14584170)
chr8 (28-63)||(23487063-23487098)
chr8 (29-68)||(28191908-28191947)
chr8 (28-63)||(28965730-28965765)
chr8 (2-62)||(33745872-33745932)
chr8 (25-56)||(33865541-33865572)
chr8 (28-62)||(16998996-16999030)
chr8 (29-63)||(18111979-18112013)
chr8 (30-64)||(26990565-26990599)
chr8 (25-63)||(29321294-29321332)
chr8 (29-63)||(32475231-32475265)
chr8 (1-64)||(33980463-33980526)
chr8 (25-63)||(38781141-38781179)
chr8 (29-63)||(40741528-40741562)
chr8 (28-62)||(44888680-44888714)
chr8 (29-66)||(8951163-8951200)
chr8 (26-63)||(13568906-13568943)
chr8 (25-62)||(14699452-14699489)
chr8 (1-55)||(17336426-17336480)
chr8 (29-62)||(17856517-17856550)
chr8 (29-62)||(28864247-28864280)
chr8 (1-51)||(35143495-35143545)
chr8 (28-65)||(36408412-36408449)
chr8 (25-62)||(36786467-36786504)
chr8 (25-62)||(37023284-37023321)
chr8 (25-62)||(38183566-38183602)
chr8 (28-57)||(40785154-40785183)
chr8 (30-63)||(44580615-44580648)
chr8 (29-62)||(45283796-45283829)
chr8 (26-62)||(8073130-8073166)
chr8 (34-62)||(29279195-29279223)
chr8 (28-64)||(35179598-35179634)
chr8 (26-62)||(41014504-41014540)
chr8 (25-57)||(44580879-44580911)
[»] chr1 (86 HSPs)
chr1 (25-64)||(11741395-11741434)
chr1 (25-64)||(37951949-37951988)
chr1 (25-64)||(39497431-39497470)
chr1 (25-63)||(4102714-4102752)
chr1 (25-63)||(45039411-45039449)
chr1 (25-63)||(52431174-52431212)
chr1 (25-62)||(943637-943674)
chr1 (25-62)||(1039381-1039418)
chr1 (25-62)||(1046287-1046324)
chr1 (25-62)||(15811232-15811269)
chr1 (25-62)||(23541979-23542016)
chr1 (1-63)||(25509208-25509270)
chr1 (25-62)||(30290265-30290302)
chr1 (25-62)||(36694854-36694891)
chr1 (25-62)||(36710955-36710992)
chr1 (25-62)||(39363194-39363231)
chr1 (25-62)||(44649629-44649666)
chr1 (25-62)||(46075867-46075904)
chr1 (25-62)||(49907021-49907058)
chr1 (1-62)||(14171542-14171603)
chr1 (25-61)||(30289862-30289898)
chr1 (25-64)||(7763749-7763788)
chr1 (29-64)||(9202243-9202278)
chr1 (28-63)||(38920238-38920273)
chr1 (25-64)||(41855473-41855512)
chr1 (29-63)||(1047991-1048025)
chr1 (25-59)||(13343776-13343810)
chr1 (28-66)||(17483729-17483767)
chr1 (25-63)||(27037268-27037306)
chr1 (29-63)||(39362933-39362967)
chr1 (29-63)||(39750120-39750154)
chr1 (25-63)||(42276161-42276199)
chr1 (25-63)||(52601990-52602028)
chr1 (25-62)||(7783991-7784028)
chr1 (29-66)||(7784258-7784295)
chr1 (28-65)||(8104291-8104328)
chr1 (25-62)||(16456636-16456673)
chr1 (1-55)||(21290129-21290183)
chr1 (29-62)||(23542243-23542276)
chr1 (29-62)||(39497697-39497730)
chr1 (25-62)||(39750381-39750418)
chr1 (25-62)||(43456621-43456658)
chr1 (29-62)||(44646535-44646568)
chr1 (29-62)||(44649893-44649926)
chr1 (25-62)||(45335885-45335922)
chr1 (28-64)||(16576095-16576131)
chr1 (29-65)||(35984399-35984435)
chr1 (25-65)||(50246929-50246969)
chr1 (29-64)||(5765994-5766029)
chr1 (28-63)||(9413328-9413363)
chr1 (28-63)||(14171793-14171828)
chr1 (25-64)||(18237092-18237131)
chr1 (28-63)||(28885841-28885876)
chr1 (29-64)||(30289600-30289635)
chr1 (29-64)||(47069052-47069087)
chr1 (25-64)||(50007973-50008012)
chr1 (30-64)||(2279951-2279985)
chr1 (28-62)||(4280129-4280163)
chr1 (25-55)||(8472056-8472086)
chr1 (29-63)||(15810971-15811005)
chr1 (28-62)||(21631110-21631144)
chr1 (25-63)||(22567065-22567103)
chr1 (28-62)||(25227304-25227338)
chr1 (33-67)||(25283866-25283900)
chr1 (28-62)||(27037533-27037567)
chr1 (28-62)||(36695118-36695152)
chr1 (28-62)||(36711219-36711253)
chr1 (28-62)||(38613739-38613773)
chr1 (28-62)||(41317593-41317627)
chr1 (28-62)||(42872337-42872371)
chr1 (28-62)||(44646271-44646305)
chr1 (25-63)||(50008483-50008521)
chr1 (25-63)||(50937778-50937816)
chr1 (28-65)||(35693328-35693365)
chr1 (29-62)||(37951689-37951722)
chr1 (25-62)||(38261340-38261377)
chr1 (29-62)||(45039676-45039709)
chr1 (25-65)||(1427196-1427236)
chr1 (28-64)||(1767863-1767899)
chr1 (28-64)||(6089733-6089769)
chr1 (25-57)||(10433326-10433358)
chr1 (28-64)||(11353065-11353101)
chr1 (1-62)||(15892539-15892600)
chr1 (25-57)||(31238724-31238756)
chr1 (25-57)||(45285810-45285842)
chr1 (28-72)||(48067898-48067942)
[»] scaffold0029 (1 HSPs)
scaffold0029 (25-63)||(51682-51720)
[»] scaffold0012 (2 HSPs)
scaffold0012 (25-63)||(47639-47677)
scaffold0012 (29-62)||(47904-47937)
[»] scaffold0674 (1 HSPs)
scaffold0674 (1-62)||(5151-5212)
[»] scaffold0549 (1 HSPs)
scaffold0549 (1-62)||(10158-10219)
[»] scaffold0240 (2 HSPs)
scaffold0240 (1-62)||(18497-18558)
scaffold0240 (28-62)||(18759-18793)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-62)||(3438-3499)
[»] scaffold0002 (1 HSPs)
scaffold0002 (28-63)||(355334-355369)
[»] scaffold0020 (1 HSPs)
scaffold0020 (28-66)||(164210-164248)
[»] scaffold0339 (1 HSPs)
scaffold0339 (25-62)||(7140-7177)
[»] scaffold0308 (1 HSPs)
scaffold0308 (25-62)||(14348-14385)
[»] scaffold0163 (1 HSPs)
scaffold0163 (28-65)||(1449-1486)
[»] scaffold0107 (1 HSPs)
scaffold0107 (25-62)||(48654-48691)
[»] scaffold0250 (1 HSPs)
scaffold0250 (25-65)||(9426-9466)
[»] scaffold0237 (1 HSPs)
scaffold0237 (29-64)||(6613-6648)
[»] scaffold0368 (1 HSPs)
scaffold0368 (28-62)||(8218-8252)
[»] scaffold0121 (1 HSPs)
scaffold0121 (25-63)||(24630-24668)
[»] scaffold0019 (1 HSPs)
scaffold0019 (25-62)||(117846-117883)
[»] scaffold1283 (1 HSPs)
scaffold1283 (29-61)||(27-59)
[»] scaffold0047 (1 HSPs)
scaffold0047 (1-62)||(61828-61888)
[»] scaffold0009 (1 HSPs)
scaffold0009 (28-64)||(246454-246490)


Alignment Details
Target: chr3 (Bit Score: 114; Significance: 6e-58; HSPs: 128)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 68 - 235
Target Start/End: Complemental strand, 26896716 - 26896549
Alignment:
Q  68 ttttattatttatgttgatgaacaccaacattttaaaagtaaacataacatnnnnnnnggactatatgtttgaaacagatacacactgagactaacttat 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| ||||||||||||||||||||    
T  26896716 ttttattatttatgttgatgaacaccaacattttaaaagtaaacataacataaaaaaaggactatatgtttgaaacagacacacactgagactaacttat 26896617  T
Q  168 taaagacacacataatgtccaagacattataaactnnnnnnngtgaaacatgagacataggccaaaaa 235  Q
    ||||||| ||||||||||| |||||||||||||||       ||||||||||||||||||||||||||    
T  26896616 taaagacgcacataatgtctaagacattataaactaaaaaaagtgaaacatgagacataggccaaaaa 26896549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 12050392 - 12050438
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattttctttt 71  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  12050392 ttctcaaaagggtcttataattagggacggagggagtattttttttt 12050438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 25149122 - 25149163
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatttt 66  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25149122 ttctcaaaagggtcttataattagggacggagggagtatttt 25149163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10220994 - 10220933
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||    
T  10220994 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataattagggacggagggagta 10220933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 7181387 - 7181348
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7181387 ttctcaaaagggtcttataattagggacggagggagtatt 7181348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 22103929 - 22103968
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22103929 ttctcaaaagggtcttataattagggacggagggagtatt 22103968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 37728750 - 37728711
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37728750 ttctcaaaagggtcttataattagggacggagggagtatt 37728711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 44543819 - 44543780
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44543819 ttctcaaaagggtcttataattagggacggagggagtatt 44543780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 51284062 - 51284101
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  51284062 ttctcaaaagggtcttataattagggacggagggagtatt 51284101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 35868083 - 35868121
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  35868083 ttctcaaaagggtcttataattagggacggagggagtat 35868121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 43868140 - 43868102
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43868140 ttctcaaaagggtcttataattagggacggagggagtat 43868102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 9499497 - 9499534
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9499497 ttctcaaaagggtcttataattagggacggagggagta 9499534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 14428647 - 14428610
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14428647 ttctcaaaagggtcttataattagggacggagggagta 14428610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 21756523 - 21756486
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21756523 ttctcaaaagggtcttataattagggacggagggagta 21756486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 26593765 - 26593802
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26593765 ttctcaaaagggtcttataattagggacggagggagta 26593802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 45252810 - 45252773
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  45252810 ttctcaaaagggtcttataattagggacggagggagta 45252773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 46049986 - 46050023
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  46049986 ttctcaaaagggtcttataattagggacggagggagta 46050023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 4024088 - 4024052
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||||||||||    
T  4024088 tctcaaaagggtcttataattagggacggagggagta 4024052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 14428873 - 14428909
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||||||||||||||||||||||||||||||    
T  14428873 caaaagggtcttataattagggacggagggagtattt 14428909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 24087335 - 24087375
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  24087335 ttctcaaaagggtcttataattagggacggaggtagtattt 24087375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36099027 - 36098966
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||    
T  36099027 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataattagggacggatggagta 36098966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 4759351 - 4759390
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  4759351 ttctcaaaagggtcttataattagggacggaggtagtatt 4759390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 7051720 - 7051759
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  7051720 ttctcaaaaggatcttataattagggacggagggagtatt 7051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 20862461 - 20862496
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  20862461 caaaagggtcttataattagggacggagggagtatt 20862496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 26306607 - 26306646
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  26306607 ttctcaaaagggtcttataattaggaacggagggagtatt 26306646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 26806148 - 26806113
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  26806148 caaaagggtcttataattagggacggagggagtatt 26806113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 41392880 - 41392919
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  41392880 ttctcaaaagggtcttataattagggacggaggtagtatt 41392919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 50647717 - 50647682
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  50647717 caaaagggtcttataattagggacggagggagtatt 50647682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 53361855 - 53361894
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  53361855 ttctcaaaatggtcttataattagggacggagggagtatt 53361894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 4024315 - 4024353
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtattttc 67  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  4024315 caaaagggtcttataattagggacggagggagtactttc 4024353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 20862233 - 20862195
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  20862233 ttctcaaaagggtcttataattagggacggatggagtat 20862195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 22832607 - 22832645
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  22832607 ttctcaaaagggtcttataattagggacggaaggagtat 22832645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 23700785 - 23700823
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  23700785 ttctcaaaaaggtcttataattagggacggagggagtat 23700823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 23719240 - 23719278
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  23719240 ttctcaaaaaggtcttataattagggacggagggagtat 23719278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 23737696 - 23737734
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  23737696 ttctcaaaaaggtcttataattagggacggagggagtat 23737734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 26221325 - 26221287
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  26221325 ttctcaaaagagtcttataattagggacggagggagtat 26221287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 32963105 - 32963143
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  32963105 ttctcaaaaggatcttataattagggacggagggagtat 32963143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 33868485 - 33868447
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  33868485 ttctcaaaaggatcttataattagggacggagggagtat 33868447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 33868712 - 33868746
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||    
T  33868712 caaaagggtcttataattagggacggagggagtat 33868746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 36005768 - 36005810
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtattttctttt 71  Q
    |||||||||||||||||||||||||||||||||| ||| ||||    
T  36005768 caaaagggtcttataattagggacggagggagtagtttttttt 36005810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 43701215 - 43701177
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  43701215 ttctcaaaagggtcttataattagggacagagggagtat 43701177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 46845492 - 46845530
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  46845492 ttctcaaaagggtcttataattagggacggaggtagtat 46845530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 8321962 - 8321925
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  8321962 ttctcaaaagggtcttataattagggacggaggtagta 8321925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 9780012 - 9779979
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  9780012 caaaagggtcttataattagggacggagggagta 9779979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 10044903 - 10044841
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||       || |||||||| |||||||||||||||||||||||||||    
T  10044903 gtcttataaaaagggacaatttttttttcaaaaggatcttataattagggacggagggagtat 10044841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 12683182 - 12683219
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  12683182 ttctcaaaatggtcttataattagggacggagggagta 12683219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 16435010 - 16434977
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  16435010 caaaagggtcttataattagggacggagggagta 16434977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 26058583 - 26058546
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  26058583 ttctcaaaagggtcttataattagggacggaggaagta 26058546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 31531415 - 31531448
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  31531415 caaaagggtcttataattagggacggagggagta 31531448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 36099228 - 36099265
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtatttt 66  Q
    |||||||||||||||||||||||| |||||||||||||    
T  36099228 caaaagggtcttataattagggacagagggagtatttt 36099265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 42801555 - 42801518
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||||||||||||||||||||||| |||||||    
T  42801555 tcaaaagggtcttataattagggacggaggtagtattt 42801518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 46878439 - 46878476
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  46878439 ttctcaaaagggtcttataattaaggacggagggagta 46878476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 47066971 - 47066934
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  47066971 ttctcaaaagggtcttataattagggacggaggaagta 47066934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 50647944 - 50647981
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||| |||||||||||||    
T  50647944 ttctcaaaagggtcttataattagagacggagggagta 50647981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 50726783 - 50726820
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  50726783 ttctcaaaagggtcttataatcagggacggagggagta 50726820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 50786065 - 50786028
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  50786065 ttctcaaaagggtcttataatcagggacggagggagta 50786028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 52059018 - 52058985
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  52059018 caaaagggtcttataattagggacggagggagta 52058985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 54782917 - 54782954
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  54782917 ttctcaaaagggtcttataattagggacgaagggagta 54782954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 1111648 - 1111688
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||||||||||||||||||||||||||  |||||||    
T  1111648 ttctcaaaagggtcttataattagggacggagatagtattt 1111688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 10015792 - 10015828
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||||||||||||||| ||||||    
T  10015792 tcaaaagggtcttataattagggacggaggtagtatt 10015828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16435212 - 16435273
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       ||||||||||| |||||||||||| |||||||||||||    
T  16435212 gtcttataaaaagggacaaaaaaattctcaaaaggatcttataattagagacggagggagta 16435273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 19897839 - 19897875
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||||||||||||||| ||||||    
T  19897839 tcaaaagggtcttataattagggacggaggtagtatt 19897875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 20918256 - 20918224
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagg 57  Q
    |||||||||||||||||||||||||||||||||    
T  20918256 ttctcaaaagggtcttataattagggacggagg 20918224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 20927218 - 20927186
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagg 57  Q
    |||||||||||||||||||||||||||||||||    
T  20927218 ttctcaaaagggtcttataattagggacggagg 20927186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 28673294 - 28673334
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  28673294 ttctcaaaaggatcttataattagggacggaggtagtattt 28673334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 46703064 - 46703032
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagg 57  Q
    |||||||||||||||||||||||||||||||||    
T  46703064 ttctcaaaagggtcttataattagggacggagg 46703032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Complemental strand, 1572368 - 1572337
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggag 56  Q
    ||||||||||||||||||||||||||||||||    
T  1572368 ttctcaaaagggtcttataattagggacggag 1572337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 10656728 - 10656689
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  10656728 ttctcaaaagggtcttataattaggggcggaggtagtatt 10656689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 17699031 - 17699070
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||| ||||||||||||||||||||||| ||||||    
T  17699031 ttctcaaaatggtcttataattagggacggaggtagtatt 17699070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 28875254 - 28875289
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||| |||||    
T  28875254 tcaaaagggtcttataattagggacggaggtagtat 28875289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 30819915 - 30819876
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||| ||||||||||||| ||||||    
T  30819915 ttctcaaaagggtcttatagttagggacggaggtagtatt 30819876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 32978743 - 32978778
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||| ||||||||||||||||||||||||    
T  32978743 tcaaaagggtcctataattagggacggagggagtat 32978778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 33212457 - 33212397
Alignment:
Q  2 tcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||       ||||||||||| ||||||||||||||||||||| ||||    
T  33212457 tcttataaaaagggacaaaaaaattctcaaaaggatcttataattagggacggaggtagta 33212397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 57
Target Start/End: Original strand, 44542474 - 44542505
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagg 57  Q
    ||||||||||||||||||||||||||||||||    
T  44542474 tctcaaaagggtcttataattagggacggagg 44542505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 48909909 - 48909870
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  48909909 ttctcaaaagggtcttataattagggactgaggtagtatt 48909870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Complemental strand, 51489404 - 51489373
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggag 56  Q
    ||||||||||||||||||||||||||||||||    
T  51489404 ttctcaaaagggtcttataattagggacggag 51489373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 4759122 - 4759088
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||| ||||    
T  4759122 tcaaaagggtcttataattagggacggaggtagta 4759088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 9780244 - 9780278
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||| |||||    
T  9780244 tcaaaagggtcttataattagggacggagagagta 9780278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 15996776 - 15996810
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||| ||||    
T  15996776 tcaaaagggtcttataattagggacggaggtagta 15996810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 17591318 - 17591284
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||| |||||||||||    
T  17591318 caaaagggtcttataattagggatggagggagtat 17591284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 20621459 - 20621421
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatttt 66  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  20621459 tcaaaagggtcctataattagggacggaggtagtatttt 20621421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Complemental strand, 25148496 - 25148466
Alignment:
Q  25 ttctcaaaagggtcttataattagggacgga 55  Q
    |||||||||||||||||||||||||||||||    
T  25148496 ttctcaaaagggtcttataattagggacgga 25148466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 32467462 - 32467424
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  32467462 ttctcaaaagggtcttataattaaggacggagagagtat 32467424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 32569034 - 32568996
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  32569034 ttctcaaaagggttttataattagggacggatggagtat 32568996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 32978515 - 32978481
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||| ||||||||||||||||||||||||||    
T  32978515 tcaaaaggatcttataattagggacggagggagta 32978481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 43978197 - 43978159
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  43978197 ttcttaaaagggtcttataattagggacggaggaagtat 43978159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 45513640 - 45513674
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||| ||||    
T  45513640 tcaaaagggtcttataattagggacggaggtagta 45513674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Original strand, 46862366 - 46862396
Alignment:
Q  25 ttctcaaaagggtcttataattagggacgga 55  Q
    |||||||||||||||||||||||||||||||    
T  46862366 ttctcaaaagggtcttataattagggacgga 46862396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 48904268 - 48904302
Alignment:
Q  30 aaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||||||||||||| ||||||    
T  48904268 aaaagggtcttataattagggacggaggtagtatt 48904302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Complemental strand, 49543714 - 49543684
Alignment:
Q  25 ttctcaaaagggtcttataattagggacgga 55  Q
    |||||||||||||||||||||||||||||||    
T  49543714 ttctcaaaagggtcttataattagggacgga 49543684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 50433389 - 50433427
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  50433389 ttctcacaagggtcttataattagggacggaggtagtat 50433427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 52177837 - 52177799
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  52177837 ttctcaaaagggtcctataattagggacggaggtagtat 52177799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 53361628 - 53361594
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||| ||||||    
T  53361628 tcaaaagggtcttataattagggacggatggagta 53361594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 54604591 - 54604625
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||| ||||||||||||||    
T  54604591 tcaaaagggtcttataattaaggacggagggagta 54604625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 6784500 - 6784463
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  6784500 ttctcaaaagggtcttataattaaggacggaggtagta 6784463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 7251282 - 7251319
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  7251282 ttcttaaaggggtcttataattagggacggagggagta 7251319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 8503505 - 8503542
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  8503505 ttctcaaaagggtcttatatttagggacggaggtagta 8503542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 8547168 - 8547205
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  8547168 tcaaaagggtcttatacttagggacggaggtagtattt 8547205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 9582280 - 9582243
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  9582280 ttctcaaaagggtcttataattagggatggaggtagta 9582243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 12906418 - 12906451
Alignment:
Q  30 aaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||| |||||    
T  12906418 aaaagggtcttataattagggacggaggtagtat 12906451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 57
Target Start/End: Complemental strand, 14758872 - 14758843
Alignment:
Q  28 tcaaaagggtcttataattagggacggagg 57  Q
    ||||||||||||||||||||||||||||||    
T  14758872 tcaaaagggtcttataattagggacggagg 14758843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 15095235 - 15095198
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  15095235 ttctcaaaagggttttataattagggacggaggtagta 15095198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 21459019 - 21458982
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  21459019 ttctcaaaaggatcttataattagggacggaggtagta 21458982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 21756751 - 21756788
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtatttt 66  Q
    |||||||||||||||  |||||||||||||||||||||    
T  21756751 caaaagggtcttatatatagggacggagggagtatttt 21756788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 27646306 - 27646343
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  27646306 ttctcaaaaggatcttataattagggacggaggtagta 27646343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 29454787 - 29454824
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  29454787 tctcaaaagggtcttataattaaggacggaggtagtat 29454824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 29719710 - 29719747
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  29719710 ttctcaaaagggtcttataattatggacggaggtagta 29719747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 30041017 - 30041054
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  30041017 ttctcaaaagagtcttataattaggaacggagggagta 30041054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 35165962 - 35165999
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  35165962 ttctcaaaagggtcttataattaaggacgaagggagta 35165999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 47008502 - 47008539
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  47008502 ttctcaaaagtgtcttataattagggacggaggtagta 47008539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 49127198 - 49127231
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggaggg 58  Q
    ||||||||| ||||||||||||||||||||||||    
T  49127198 ttctcaaaaaggtcttataattagggacggaggg 49127231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 50517522 - 50517559
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  50517522 ttctcaaaaggatcttataattagggacggaggtagta 50517559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 51283835 - 51283802
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||| |||||||||    
T  51283835 caaaagggtcttataattagggacagagggagta 51283802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 52673224 - 52673187
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||| || ||||||||||    
T  52673224 ttctcaaaagggtcttataattagtgatggagggagta 52673187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 53164200 - 53164163
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  53164200 ttctcaaaaggatcttataattagggacggaggtagta 53164163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 6784726 - 6784754
Alignment:
Q  28 tcaaaagggtcttataattagggacggag 56  Q
    |||||||||||||||||||||||||||||    
T  6784726 tcaaaagggtcttataattagggacggag 6784754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 7251054 - 7251018
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||||||||  ||||||||||||||||||||    
T  7251054 caaaagggtcttatatatagggacggagggagtattt 7251018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 8546941 - 8546909
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagg 57  Q
    ||||||||||||||||||||||| |||||||||    
T  8546941 ttctcaaaagggtcttataattaaggacggagg 8546909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 9795240 - 9795272
Alignment:
Q  30 aaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||| ||||||||||||||||    
T  9795240 aaaagggtcttataataagggacggagggagta 9795272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 20656082 - 20656046
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||||||||  ||||||||||||||||||||    
T  20656082 caaaagggtcttatatatagggacggagggagtattt 20656046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 22527621 - 22527661
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||||||||||||||||| ||||||||  |||||||    
T  22527621 ttctcaaaagggtcttataattaaggacggagtcagtattt 22527661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #122
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 26806379 - 26806415
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  26806379 tctcaaaaggctcttataattagggacggaaggagta 26806415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #123
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 27688020 - 27687984
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  27688020 tcaaaagggtcttataattaaggacggaggtagtatt 27687984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #124
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 33976540 - 33976508
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagg 57  Q
    ||||||||| |||||||||||||||||||||||    
T  33976540 ttctcaaaatggtcttataattagggacggagg 33976508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #125
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 43686765 - 43686805
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtattttct 68  Q
    |||||| || |||||||||||||||||||| ||||||||||    
T  43686765 tcaaaaaggccttataattagggacggaggtagtattttct 43686805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #126
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 45745812 - 45745776
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  45745812 tcaaaagagtcttataatttgggacggagggagtatt 45745776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #127
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 46703292 - 46703328
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||||||||  ||||||||||||||||||||    
T  46703292 caaaagggtcttatatatagggacggagggagtattt 46703328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #128
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 49383405 - 49383344
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       || ||||||| |||||||||||||||||||||| ||||    
T  49383405 gtcttataaaaagggacaatttttttttcaaaagagtcttataattagggacggaggtagta 49383344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 12126 - 12064
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||||||||||||    
T  12126 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataattagggacggagggagtat 12064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 12328 - 12364
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||| |||||||||||||||||||||||||||    
T  12328 caaaagggttttataattagggacggagggagtattt 12364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 85)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 34883848 - 34883889
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatttt 66  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  34883848 ttctcaaaagggtcttataattagggacggagggagtatttt 34883889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 11201720 - 11201680
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11201720 ttctcaaaagggtcttataattagggacggagggagtattt 11201680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 25624794 - 25624730
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||||||||||       ||||||||| |||||||||||||||||||||||||||||||    
T  25624794 gtcttataaaaagggacaaaaaaattctcaaaaaggtcttataattagggacggagggagtattt 25624730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 41450553 - 41450510
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattttct 68  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  41450553 ttctcaaaagggtcttataattagggacggagggagtatattct 41450510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 20252247 - 20252209
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20252247 ttctcaaaagggtcttataattagggacggagggagtat 20252209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 34062665 - 34062703
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34062665 ttctcaaaagggtcttataattagggacggagggagtat 34062703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 40607739 - 40607701
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40607739 ttctcaaaagggtcttataattagggacggagggagtat 40607701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 2438262 - 2438225
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2438262 ttctcaaaagggtcttataattagggacggagggagta 2438225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 7491881 - 7491844
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7491881 ttctcaaaagggtcttataattagggacggagggagta 7491844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 8716892 - 8716929
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8716892 ttctcaaaagggtcttataattagggacggagggagta 8716929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16845048 - 16845110
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||       ||||||||||| |||||||||||||||||||||||||||    
T  16845048 gtcttataaaaagggacaaaaaaattctcaaaaggatcttataattagggacggagggagtat 16845110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 17408294 - 17408331
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17408294 ttctcaaaagggtcttataattagggacggagggagta 17408331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 27560243 - 27560206
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27560243 ttctcaaaagggtcttataattagggacggagggagta 27560206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 36131028 - 36131065
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36131028 ttctcaaaagggtcttataattagggacggagggagta 36131065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 7492108 - 7492148
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtattttctt 69  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  7492108 caaaagggtcttataattagggacggagggagtactttctt 7492148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 22897428 - 22897388
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  22897428 ttctcaaaaggatcttataattagggacggagggagtattt 22897388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 4711787 - 4711727
Alignment:
Q  3 cttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||       |||||||||||||||| ||||||||||||||||||||||    
T  4711787 cttataaaaagggacaaaaaaattctcaaaagggtcttttaattagggacggagggagtat 4711727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 5664675 - 5664636
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  5664675 ttctcaaaaaggtcttataattagggacggagggagtatt 5664636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 15228149 - 15228188
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  15228149 ttctcaaaaggatcttataattagggacggagggagtatt 15228188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 65
Target Start/End: Original strand, 22182929 - 22182964
Alignment:
Q  30 aaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||||||||||||||||||||||||||||||    
T  22182929 aaaagggtcttataattagggacggagggagtattt 22182964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 8841657 - 8841695
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  8841657 ttctcaaaagggtcttataattaaggacggagggagtat 8841695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 16108248 - 16108214
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||    
T  16108248 caaaagggtcttataattagggacggagggagtat 16108214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 16805791 - 16805829
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  16805791 ttctcaaaaggatcttataattagggacggagggagtat 16805829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 26322293 - 26322331
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  26322293 ttctcaaaagggtcttataattagggacggaggtagtat 26322331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 34113568 - 34113530
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  34113568 ttctcaaaagggtcttataattagggacggatggagtat 34113530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 34113789 - 34113823
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||||||||    
T  34113789 tcaaaagggtcttataattagggacggagggagta 34113823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 39833772 - 39833738
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||    
T  39833772 caaaagggtcttataattagggacggagggagtat 39833738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 40680764 - 40680726
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  40680764 ttctcaaaagggtcttataattagggacggatggagtat 40680726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 44573858 - 44573921
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||       ||||||||||||||||||||||| ||||||||| ||||||    
T  44573858 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataattaaggacggaggtagtatt 44573921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 2060353 - 2060316
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  2060353 ttctcaaaagggtcttataattagggacggaggtagta 2060316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 2438489 - 2438522
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  2438489 caaaagggtcttataattagggacggagggagta 2438522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 7116299 - 7116336
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  7116299 ttctcaaaagggtcttataattagggacggaggtagta 7116336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 8912874 - 8912911
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  8912874 ttctcaaaagggtcttataattagggacggaggtagta 8912911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 12890211 - 12890248
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||||||||||||||||||||||| |||||||    
T  12890211 tcaaaagggtcttataattagggacggaggtagtattt 12890248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 13197645 - 13197690
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattttcttt 70  Q
    ||||||||||  ||||||||||||||||||||||||||||| ||||    
T  13197645 ttctcaaaagaatcttataattagggacggagggagtatttccttt 13197690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 18374461 - 18374412
Alignment:
Q  30 aaaagggtcttataattagggacggagggagtattttcttttattattta 79  Q
    ||||||| |||||||||||||||||||| |||||||| ||||||| ||||    
T  18374461 aaaagggccttataattagggacggaggtagtattttattttattcttta 18374412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 22897655 - 22897688
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  22897655 caaaagggtcttataattagggacggagggagta 22897688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 23789006 - 23788969
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  23789006 ttctcaaaagggtcttataattaaggacggagggagta 23788969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 28566188 - 28566151
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  28566188 ttctcaaaagggtcttataattagggacggaggtagta 28566151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 28840700 - 28840646
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacgga 55  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||||    
T  28840700 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataattagggacgga 28840646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 45474384 - 45474351
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  45474384 caaaagggtcttataattagggacggagggagta 45474351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 42629405 - 42629373
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggag 60  Q
    |||||||||||||||||||||||||||||||||    
T  42629405 tcaaaagggtcttataattagggacggagggag 42629373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 11852162 - 11852222
Alignment:
Q  2 tcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||       ||||||||||| ||||||||||||||||||||| ||||    
T  11852162 tcttataaaaagggacaaaaaaattctcaaaaggatcttataattagggacggaggtagta 11852222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 15227924 - 15227889
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||| ||||||||||||||||||||||||    
T  15227924 tcaaaagggtcctataattagggacggagggagtat 15227889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 41422546 - 41422511
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||| |||||    
T  41422546 tcaaaagggtcttataattagggacggaggtagtat 41422511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 41494625 - 41494660
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||| |||||    
T  41494625 tcaaaagggtcttataattagggacggaggtagtat 41494660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 1360055 - 1360089
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    |||||| ||||||||||||||||||||||||||||    
T  1360055 caaaagagtcttataattagggacggagggagtat 1360089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 2200243 - 2200277
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||| ||||    
T  2200243 tcaaaagggtcttataattagggacggaggtagta 2200277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 3095333 - 3095299
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||| ||||    
T  3095333 tcaaaagggtcttataattagggacggaggtagta 3095299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 8841429 - 8841395
Alignment:
Q  30 aaaagggtcttataattagggacggagggagtatt 64  Q
    ||||| |||||||||||||||||||||||||||||    
T  8841429 aaaagagtcttataattagggacggagggagtatt 8841395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 8990241 - 8990203
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  8990241 ttctcaaaaagatcttataattagggacggagggagtat 8990203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 10757807 - 10757773
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||| ||||||||    
T  10757807 caaaagggtcttataattagggacggggggagtat 10757773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 11865289 - 11865327
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||| |||||||||||||||||||||| |||||    
T  11865289 ttctcaaaagagtcttataattagggacggaggtagtat 11865327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 12360518 - 12360455
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||       |||||||||||||||||||||||  |||||||| ||||||    
T  12360518 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataattaaagacggaggtagtatt 12360455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Original strand, 16456872 - 16456902
Alignment:
Q  25 ttctcaaaagggtcttataattagggacgga 55  Q
    |||||||||||||||||||||||||||||||    
T  16456872 ttctcaaaagggtcttataattagggacgga 16456902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 18374707 - 18374741
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||| ||||    
T  18374707 tcaaaagggtcttataattagggacggaggtagta 18374741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 24345681 - 24345715
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||| ||||    
T  24345681 tcaaaagggtcttataattagggacggaggtagta 24345715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 31751102 - 31751068
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||| |||||    
T  31751102 caaaagggtcttataattagggacggaggtagtat 31751068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 32120978 - 32120944
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||| ||||||||||||||||||||||||||    
T  32120978 tcaaaaggatcttataattagggacggagggagta 32120944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 1359828 - 1359791
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  1359828 ttctccaaaggatcttataattagggacggagggagta 1359791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 1859584 - 1859543
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatttt 66  Q
    ||||||||||||||||||||||| ||||||| | ||||||||    
T  1859584 ttctcaaaagggtcttataattaaggacggatgtagtatttt 1859543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 2200010 - 2199977
Alignment:
Q  30 aaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||| |||||    
T  2200010 aaaagggtcttataattagggacggaggtagtat 2199977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 6027654 - 6027617
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  6027654 tctcaaaaggatcttataattagggacggaggtagtat 6027617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 10399462 - 10399499
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  10399462 ttctcaaaagggtcttataattagggatggaggtagta 10399499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 10757979 - 10758015
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  10757979 ttctcaaaagg-tcttataattagggacggagggagta 10758015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 11201947 - 11201980
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||| |||||||||    
T  11201947 caaaagggtcttataattagggacagagggagta 11201980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 15404707 - 15404744
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  15404707 ttctcaaaagggtcttacaattaaggacggagggagta 15404744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 16108475 - 16108512
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  16108475 ttctcaaaagaatcttataattagggacggagggagta 16108512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 59
Target Start/End: Complemental strand, 16456644 - 16456615
Alignment:
Q  30 aaaagggtcttataattagggacggaggga 59  Q
    ||||||||||||||||||||||||||||||    
T  16456644 aaaagggtcttataattagggacggaggga 16456615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 16669663 - 16669626
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  16669663 ttctcaaaagggtcttataattaagaacggagggagta 16669626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 17408067 - 17408034
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||| ||||||    
T  17408067 caaaagggtcttataattagggacggatggagta 17408034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 18970729 - 18970766
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  18970729 ttctcaaaagggtcttataattagggacagaggtagta 18970766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 23083547 - 23083514
Alignment:
Q  30 aaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||| |||||    
T  23083547 aaaagggtcttataattagggacggaggtagtat 23083514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 24345454 - 24345417
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  24345454 ttctcgaaagggtcttataattagggacggaggtagta 24345417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 26334845 - 26334882
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  26334845 ttctcaaaagagtcttataattagggacggaggtagta 26334882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 29239366 - 29239333
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    |||||| |||||||||||||||||||||||||||    
T  29239366 caaaagagtcttataattagggacggagggagta 29239333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 37229477 - 37229440
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  37229477 ttctcaaaatggtcttataattagggacggaaggagta 37229440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 39833999 - 39834036
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  39833999 ttctcaaaaaggtcttataattagggactgagggagta 39834036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 44436821 - 44436858
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  44436821 ttctcaaaagggtcttatcattagggacggaggtagta 44436858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 13215825 - 13215857
Alignment:
Q  30 aaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||| ||||    
T  13215825 aaaagggtcttataattagggacggaggtagta 13215857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 17665560 - 17665516
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattttctt 69  Q
    ||||||||| ||||||||||||||||||||||  ||||| |||||    
T  17665560 ttctcaaaaaggtcttataattagggacggagctagtatattctt 17665516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 24300351 - 24300391
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||||||||||||||||||  |||||||||| ||||    
T  24300351 ttctcaaaagggtcttataattagaaacggagggaggattt 24300391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 30466142 - 30466110
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagg 57  Q
    ||||||||||| |||||||||||||||||||||    
T  30466142 ttctcaaaaggatcttataattagggacggagg 30466110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 31633848 - 31633880
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagg 57  Q
    |||||||||||||||||||| ||||||||||||    
T  31633848 ttctcaaaagggtcttataactagggacggagg 31633880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 41968202 - 41968234
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagg 57  Q
    ||||||||||| |||||||||||||||||||||    
T  41968202 ttctcaaaaggatcttataattagggacggagg 41968234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3758 - 3819
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||    
T  3758 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataattagggacggagggagta 3819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 3559 - 3525
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||| |||||||||||||||||||||||    
T  3559 tcaaaagggtcctataattagggacggagggagta 3525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 259122 - 259162
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  259122 ttctcaaaagggtcttataattagggacggagggagtattt 259162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26255157 - 26255096
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||    
T  26255157 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataattagggacggagggagta 26255096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 32814470 - 32814431
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32814470 ttctcaaaagggtcttataattagggacggagggagtatt 32814431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 33858866 - 33858905
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33858866 ttctcaaaagggtcttataattagggacggagggagtatt 33858905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 39871613 - 39871652
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  39871613 ttctcaaaagggtcttataattagggacggagggagtatt 39871652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 29286037 - 29286075
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29286037 ttctcaaaagggtcttataattagggacggagggagtat 29286075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 34012493 - 34012556
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||    
T  34012493 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataattagggacggaggtagtatt 34012556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 36646637 - 36646679
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattttc 67  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  36646637 ttctcaaaagggtcttctaattagggacggagggagtattttc 36646679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 36698131 - 36698169
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36698131 ttctcaaaagggtcttataattagggacggagggagtat 36698169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 38858335 - 38858297
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38858335 ttctcaaaagggtcttataattagggacggagggagtat 38858297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 19920600 - 19920563
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19920600 ttctcaaaagggtcttataattagggacggagggagta 19920563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 21295188 - 21295151
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21295188 ttctcaaaagggtcttataattagggacggagggagta 21295151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 32872375 - 32872412
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32872375 ttctcaaaagggtcttataattagggacggagggagta 32872412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 39197755 - 39197718
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39197755 ttctcaaaagggtcttataattagggacggagggagta 39197718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 41026096 - 41026133
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41026096 ttctcaaaagggtcttataattagggacggagggagta 41026133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 41252361 - 41252398
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41252361 ttctcaaaagggtcttataattagggacggagggagta 41252398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 48521066 - 48521029
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48521066 ttctcaaaagggtcttataattagggacggagggagta 48521029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7449331 - 7449270
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       ||||||||| ||||||||||||||||||||||||||||    
T  7449331 gtcttataaaaagggacaaaaaaattctcaaaatggtcttataattagggacggagggagta 7449270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25247666 - 25247727
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       |||||||||| |||||||||||||||||||||||||||    
T  25247666 gtcttataaaaagggacaaaaaaattctcaaaagagtcttataattagggacggagggagta 25247727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 33381574 - 33381614
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagtatttt 66  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  33381574 tctcaaaagggtcttataattagggacggaggtagtatttt 33381614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 40300266 - 40300230
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||||||||||    
T  40300266 tctcaaaagggtcttataattagggacggagggagta 40300230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 2290016 - 2290054
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  2290016 ttctcaaaagggtcttataattagggacggaggtagtat 2290054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 20075111 - 20075145
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||    
T  20075111 caaaagggtcttataattagggacggagggagtat 20075145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 25950892 - 25950821
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagtattttctttta 72  Q
    |||||||||||||||||       ||||||||| ||||||||||||| ||||||||| |||||||| |||||    
T  25950892 gtcttataaaaagggacaaaaaaattctcaaaaaggtcttataattaaggacggaggtagtattttgtttta 25950821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 28060981 - 28061015
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||    
T  28060981 caaaagggtcttataattagggacggagggagtat 28061015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 29177252 - 29177290
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  29177252 ttctcaaaaggatcttataattagggacggagggagtat 29177290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 34979077 - 34979115
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  34979077 ttctcaaaagagtcttataattagggacggagggagtat 34979115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 44547463 - 44547425
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  44547463 ttctcaaaaaggtcttataattagggacggagggagtat 44547425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 6387362 - 6387321
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatttt 66  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  6387362 ttctcaaaagagtcttataattagagacggagggagtatttt 6387321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 26299377 - 26299323
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacgga 55  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||||    
T  26299377 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataattagggacgga 26299323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 31458034 - 31457997
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  31458034 ttctcaaaagggtcttataattagggacggaggaagta 31457997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 36711298 - 36711335
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  36711298 ttctcaaaagggtcttataattaggaacggagggagta 36711335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 38428411 - 38428444
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  38428411 caaaagggtcttataattagggacggagggagta 38428444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 41003154 - 41003191
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  41003154 ttctcaaaagggtcttataattaaggacggagggagta 41003191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 45907279 - 45907242
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||| |||||||||||||||||||||||||||    
T  45907279 tcaaaagggtattataattagggacggagggagtattt 45907242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 9140533 - 9140573
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||||||||||||||||||||||||||  |||||||    
T  9140533 ttctcaaaagggtcttataattagggacggagatagtattt 9140573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 19292900 - 19292839
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       ||||||||||| ||||||||||||||||||||| ||||    
T  19292900 gtcttataaaaagggacaatttttttctcaaaaggatcttataattagggacggaggtagta 19292839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 28016522 - 28016575
Alignment:
Q  2 tcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacgga 55  Q
    ||||||||||||||||       |||||||||||||||||||||||||||||||    
T  28016522 tcttataaaaagggactaaataattctcaaaagggtcttataattagggacgga 28016575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 31769332 - 31769364
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagg 57  Q
    |||||||||||||||||||||||||||||||||    
T  31769332 ttctcaaaagggtcttataattagggacggagg 31769364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32118139 - 32118200
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       || |||||||||||||||||||||||||||||| ||||    
T  32118139 gtcttataaaaagggacaatttttttttcaaaagggtcttataattagggacggaggtagta 32118200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 42541864 - 42541900
Alignment:
Q  30 aaaagggtcttataattagggacggagggagtatttt 66  Q
    |||||||||||||||||||||||||||| ||||||||    
T  42541864 aaaagggtcttataattagggacggaggtagtatttt 42541900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 12616383 - 12616422
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  12616383 ttctcaaaagggtcttataataagggacggaggtagtatt 12616422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 12930355 - 12930316
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  12930355 ttctcaaaagagtcttataattagggacggaggtagtatt 12930316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 27813530 - 27813495
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||| |||||    
T  27813530 tcaaaagggtcttataattagggacggaggtagtat 27813495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 39135132 - 39135093
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  39135132 ttctcaaaagggtcttgtaattagggacggaggtagtatt 39135093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 1275736 - 1275770
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||| ||||||||||    
T  1275736 tcaaaagggtcttataattagggatggagggagta 1275770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Original strand, 11647834 - 11647864
Alignment:
Q  25 ttctcaaaagggtcttataattagggacgga 55  Q
    |||||||||||||||||||||||||||||||    
T  11647834 ttctcaaaagggtcttataattagggacgga 11647864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 18113169 - 18113203
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||| |||||||||||||    
T  18113169 tcaaaagggtcttataattagagacggagggagta 18113203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 29177025 - 29176991
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||| ||||||||||||||    
T  29177025 caaaagggtcttataattagagacggagggagtat 29176991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 31581711 - 31581677
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||| ||||    
T  31581711 tcaaaagggtcttataattagggacggaggtagta 31581677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 44510346 - 44510380
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||| ||||||||||||||||||||||||||||    
T  44510346 tcaaaatggtcttataattagggacggagggagta 44510380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 46415005 - 46415043
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  46415005 ttctcaaaatggtcttataattagggacggaggtagtat 46415043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 1574751 - 1574718
Alignment:
Q  30 aaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||| |||||    
T  1574751 aaaagggtcttataattagggacggaggtagtat 1574718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 18751982 - 18752019
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  18751982 ttctcaaaagagtcttataattagggacggaggtagta 18752019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 19845669 - 19845706
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  19845669 ttctcaaaaggatcttataattagggacggaggtagta 19845706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 21119594 - 21119557
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  21119594 ttctcaaaaggatcttataattagggacggaggtagta 21119557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 28060754 - 28060717
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  28060754 ttctcaaaagggtcttataattaaggacggatggagta 28060717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 29643143 - 29643180
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||| || ||||||||||    
T  29643143 ttctcaaaagggtcttataattagagatggagggagta 29643180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 32643757 - 32643794
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  32643757 ttctcaaaagggtcttataattaggaacggaggtagta 32643794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 32759820 - 32759857
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  32759820 tcaaaagggccctataattagggacggagggagtattt 32759857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 54
Target Start/End: Original strand, 41803471 - 41803500
Alignment:
Q  25 ttctcaaaagggtcttataattagggacgg 54  Q
    ||||||||||||||||||||||||||||||    
T  41803471 ttctcaaaagggtcttataattagggacgg 41803500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 43093409 - 43093446
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  43093409 ttctcaaaagggtcttataattaggggcggaggtagta 43093446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 17317478 - 17317446
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagg 57  Q
    ||||||||||| |||||||||||||||||||||    
T  17317478 ttctcaaaaggatcttataattagggacggagg 17317446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 22991747 - 22991783
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  22991747 tcaaaaggatcttataattagggacggaggtagtatt 22991783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 27529290 - 27529229
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       || |||||||| ||||||||||||||||||||| ||||    
T  27529290 gtcttataaaaagggacaatttttttttcaaaaggatcttataattagggacggaggtagta 27529229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 231081 - 231142
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||    
T  231081 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataattagggacggagggagta 231142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 8743249 - 8743188
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||    
T  8743249 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataattagggacggagggagta 8743188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 4844437 - 4844399
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4844437 ttctcaaaagggtcttataattagggacggagggagtat 4844399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 30248684 - 30248646
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30248684 ttctcaaaagggtcttataattagggacggagggagtat 30248646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 34915543 - 34915589
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattttctttt 71  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||    
T  34915543 ttctcaaaagggtcttataattagggacggaggtagtattttttttt 34915589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 25045643 - 25045692
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattttcttttatt 74  Q
    ||||||||||||||||||||||||||||||||| |||||| | |||||||    
T  25045643 ttctcaaaagggtcttataattagggacggaggtagtattattttttatt 25045692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 34301832 - 34301869
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34301832 ttctcaaaagggtcttataattagggacggagggagta 34301869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 25197189 - 25197149
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  25197189 ttctcaaaaggatcttataattagggacggagggagtattt 25197149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 15498666 - 15498627
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  15498666 ttctcaaaagggtcttataattagggacggaggtagtatt 15498627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 16122517 - 16122560
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtattttctttt 71  Q
    |||||||||||||||||||||||||||||| |||||||| ||||    
T  16122517 tcaaaagggtcttataattagggacggaggtagtattttttttt 16122560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17227503 - 17227559
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagg 57  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  17227503 gtcttataaaaagggacaaaaaatttctcaaaagggtcttataattagggacggagg 17227559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 19097801 - 19097840
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  19097801 ttctcaaaagggtcttataattagagacggagggagtatt 19097840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 23398141 - 23398176
Alignment:
Q  27 ctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||    
T  23398141 ctcaaaagggtcttataattagggacggagggagta 23398176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 402621 - 402659
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  402621 ttctcaaaagggtcttataattagggacggaggtagtat 402659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 5457449 - 5457411
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  5457449 ttctcaaaaaggtcttataattagggacggagggagtat 5457411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 9038676 - 9038642
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||||||||    
T  9038676 tcaaaagggtcttataattagggacggagggagta 9038642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 9388791 - 9388829
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  9388791 ttctcaaaaaggtcttataattagggacggagggagtat 9388829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 11847835 - 11847869
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||||||||    
T  11847835 tcaaaagggtcttataattagggacggagggagta 11847869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 12144043 - 12144077
Alignment:
Q  30 aaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||||||||||||||||||||    
T  12144043 aaaagggtcttataattagggacggagggagtatt 12144077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 13901678 - 13901640
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  13901678 ttctcaaaagggtcttataattagggacggaggtagtat 13901640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 23604497 - 23604459
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  23604497 ttctcaaaagggtcttataattagggacggaggtagtat 23604459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 34741730 - 34741764
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||    
T  34741730 caaaagggtcttataattagggacggagggagtat 34741764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 287414 - 287451
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  287414 ttctcaaaaaggtcttataattagggacggagggagta 287451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 925933 - 925970
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  925933 ttctcaaaagggtcttataattaggaacggagggagta 925970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 2090695 - 2090658
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  2090695 ttctcaaaagggtcttataattagggacggaggtagta 2090658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 9388562 - 9388529
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  9388562 caaaagggtcttataattagggacggagggagta 9388529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 10195993 - 10196030
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||| |||||||||||||    
T  10195993 ttctcaaaagggtcttataattagagacggagggagta 10196030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 11200631 - 11200590
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatttt 66  Q
    ||||||||||| ||||||||||||||||||||| ||||||||    
T  11200631 ttctcaaaaggctcttataattagggacggaggtagtatttt 11200590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 16272971 - 16273008
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||||||||||||||||||||||| |||||||    
T  16272971 tcaaaagggtcttataattagggacggaggaagtattt 16273008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 23397912 - 23397875
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtatttt 66  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  23397912 caaaatggtcttataattagggacggagggagtatttt 23397875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 33487870 - 33487833
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  33487870 ttctcaaaaaggtcttataattagggacggagggagta 33487833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 13321329 - 13321365
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||||||||||||||| ||||||    
T  13321329 tcaaaagggtcttataattagggacggaggtagtatt 13321365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 13648130 - 13648166
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||| ||||||||||||||    
T  13648130 tctcaaaagggtcttataattaaggacggagggagta 13648166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29036187 - 29036126
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       ||||||||||| ||||||||||||| ||||||||||||    
T  29036187 gtcttataaaaagggacaaaaaaattctcaaaaggatcttataattaggaacggagggagta 29036126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 7772213 - 7772174
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  7772213 ttctcaaaagagtcttataattagggacggaggtagtatt 7772174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 7847308 - 7847347
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||| ||||||||||||| ||||||    
T  7847308 ttctcaaaagggtcttatatttagggacggaggtagtatt 7847347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Original strand, 8637275 - 8637306
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggag 56  Q
    ||||||||||||||||||||||||||||||||    
T  8637275 ttctcaaaagggtcttataattagggacggag 8637306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 13647902 - 13647867
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||| |||||||||||||||||    
T  13647902 tcaaaagggtcttataataagggacggagggagtat 13647867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 1730104 - 1730138
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||| ||||||||||||||||||||||||||    
T  1730104 tcaaaaggatcttataattagggacggagggagta 1730138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 6147420 - 6147386
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggaggga 59  Q
    ||||||||||||||||||||||||| |||||||||    
T  6147420 ttctcaaaagggtcttataattaggaacggaggga 6147386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 9341875 - 9341837
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  9341875 ttctcaaaaggatcttataattagggacggaggtagtat 9341837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 12143811 - 12143777
Alignment:
Q  30 aaaagggtcttataattagggacggagggagtatt 64  Q
    ||||| |||||||||||||||||||||||||||||    
T  12143811 aaaagtgtcttataattagggacggagggagtatt 12143777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 27581424 - 27581386
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  27581424 ttctcaaaagggtcttataattggggacggaggtagtat 27581386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 31091479 - 31091445
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||| ||||    
T  31091479 tcaaaagggtcttataattagggacggaggtagta 31091445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 1147267 - 1147304
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  1147267 ttcttaaaagggtcttataattagggacggatggagta 1147304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 1779817 - 1779784
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||| ||||||||||||||||||||||||||    
T  1779817 caaaaggatcttataattagggacggagggagta 1779784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 6418135 - 6418168
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||| ||||||||||||||||||||||||||||    
T  6418135 caaaaaggtcttataattagggacggagggagta 6418168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 11161888 - 11161847
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatttt 66  Q
    ||||||||||| ||||||||||| ||||||||| ||||||||    
T  11161888 ttctcaaaaggctcttataattaaggacggaggtagtatttt 11161847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 12106064 - 12106101
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||| |||||||||||||||||||||| |||||    
T  12106064 ttctcaaaaaggtcttataattagggacggagagagta 12106101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 13866626 - 13866593
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||| ||||    
T  13866626 caaaagggtcttataattagggacggaggtagta 13866593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 13866857 - 13866894
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  13866857 tcaaaagggtcctataattagggacggaggtagtattt 13866894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 23282805 - 23282842
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  23282805 ttctcaaaagggtcttatatttagggacggaggtagta 23282842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 32615026 - 32614989
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  32615026 ttctcaaaaggttcttataattagggacggaggtagta 32614989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 14629940 - 14629908
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagg 57  Q
    ||||||||||||||||| |||||||||||||||    
T  14629940 ttctcaaaagggtcttaaaattagggacggagg 14629908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 15498891 - 15498927
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  15498891 tcaaaagggtcctataattagggacggaggtagtatt 15498927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 16127296 - 16127256
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16127296 ttctcaaaagggtcttataattagggacggagggagtattt 16127256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 6673228 - 6673266
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6673228 ttctcaaaagggtcttataattagggacggagggagtat 6673266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 14913685 - 14913647
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14913685 ttctcaaaagggtcttataattagggacggagggagtat 14913647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 22527729 - 22527691
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22527729 ttctcaaaagggtcttataattagggacggagggagtat 22527691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 26894873 - 26894911
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26894873 ttctcaaaagggtcttataattagggacggagggagtat 26894911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 40004409 - 40004447
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40004409 ttctcaaaagggtcttataattagggacggagggagtat 40004447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 1265986 - 1265949
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1265986 ttctcaaaagggtcttataattagggacggagggagta 1265949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 9020728 - 9020691
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9020728 tcaaaagggtcttataattagggacggagggagtattt 9020691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 9828430 - 9828393
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9828430 ttctcaaaagggtcttataattagggacggagggagta 9828393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 32147355 - 32147293
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||       ||||||||| |||||||||||||||||||||||||||||    
T  32147355 gtcttataaaaagggacaaaaaaattctcaaaaaggtcttataattagggacggagggagtat 32147293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 34662240 - 34662203
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34662240 tctcaaaagggtcttataattagggacggagggagtat 34662203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 7951598 - 7951562
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||||||||||    
T  7951598 tctcaaaagggtcttataattagggacggagggagta 7951562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 8949849 - 8949809
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  8949849 ttctcaaaagggtcttataattagggacggaggtagtattt 8949809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 16153255 - 16153294
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  16153255 ttctcaaaagggtcttataattagggacggatggagtatt 16153294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 186362 - 186396
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||    
T  186362 caaaagggtcttataattagggacggagggagtat 186396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 3028050 - 3028012
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  3028050 ttctcaaaagggtcttataattagggacggaggtagtat 3028012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 10734526 - 10734560
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||||||||    
T  10734526 tcaaaagggtcttataattagggacggagggagta 10734560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 15190815 - 15190853
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  15190815 ttctcaaaagagtcttataattagggacggagggagtat 15190853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 15521942 - 15521980
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  15521942 ttctcaaaagggttttataattagggacggagggagtat 15521980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 16440968 - 16440930
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  16440968 ttcttaaaagggtcttataattagggacggagggagtat 16440930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 23260138 - 23260176
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  23260138 ttctcaaaagggtcttataattagggacggaggtagtat 23260176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 25601060 - 25601098
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  25601060 ttctcaaaagggtcttataattaggaacggagggagtat 25601098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 41384172 - 41384210
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  41384172 ttctcaaaaggatcttataattagggacggagggagtat 41384210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 41641132 - 41641086
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattttctttt 71  Q
    ||||||||| | |||||||||||||||||||||||||||||| ||||    
T  41641132 ttctcaaaatgatcttataattagggacggagggagtattttttttt 41641086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 3497800 - 3497837
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  3497800 ttctcaaaagggtcttataattaggaacggagggagta 3497837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 9828657 - 9828690
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  9828657 caaaagggtcttataattagggacggagggagta 9828690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 13862995 - 13863032
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||| |||||||||||||||||||||||    
T  13862995 ttctcaaaagggtcatataattagggacggagggagta 13863032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 21239136 - 21239095
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatttt 66  Q
    |||||||||||||||| |||||||||||||||| ||||||||    
T  21239136 ttctcaaaagggtcttctaattagggacggaggtagtatttt 21239095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 23286474 - 23286511
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  23286474 ttctcaaaagggtcttataattagggacggaggtagta 23286511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 28041351 - 28041392
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatttt 66  Q
    |||||||| |||||||||||||||||| ||||||||||||||    
T  28041351 ttctcaaaggggtcttataattagggatggagggagtatttt 28041392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 32147555 - 32147592
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtatttt 66  Q
    |||||||||||||||||||| |||||||||||||||||    
T  32147555 caaaagggtcttataattagagacggagggagtatttt 32147592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 43060411 - 43060448
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  43060411 ttctcaaaagggtcttataattagggacggaggtagta 43060448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11780825 - 11780764
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       |||||||||||||||||||| |||||||||||| ||||    
T  11780825 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataactagggacggaggtagta 11780764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 19571940 - 19571976
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||||| ||||    
T  19571940 tctcaaaagggtcttataattagggacggaggtagta 19571976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 3497573 - 3497538
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||| ||||||||    
T  3497573 caaaagggtcttataattagggacggatggagtatt 3497538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 7940486 - 7940451
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||| |||||    
T  7940486 tcaaaagggtcttataattagggacggaggtagtat 7940451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 14435864 - 14435829
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||| |||||    
T  14435864 tcaaaagggtcttataattagggacggaggtagtat 14435829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 16926489 - 16926450
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  16926489 ttctcaaaagggtcttataattagggatggaggtagtatt 16926450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 26889627 - 26889592
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||| ||||||||||||||||||||||||    
T  26889627 tcaaaagggtcctataattagggacggagggagtat 26889592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Original strand, 27873345 - 27873376
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggag 56  Q
    ||||||||||||||||||||||||||||||||    
T  27873345 ttctcaaaagggtcttataattagggacggag 27873376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Complemental strand, 32478175 - 32478144
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggag 56  Q
    ||||||||||||||||||||||||||||||||    
T  32478175 ttctcaaaagggtcttataattagggacggag 32478144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 41383945 - 41383910
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||| ||||||||||||||||||||||||||||    
T  41383945 caaaaggatcttataattagggacggagggagtatt 41383910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 3686754 - 3686792
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  3686754 ttctcaaaagagtcttataattagggacggaaggagtat 3686792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 4753218 - 4753252
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggaggga 59  Q
    |||| ||||||||||||||||||||||||||||||    
T  4753218 ttcttaaaagggtcttataattagggacggaggga 4753252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 4976293 - 4976327
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||| ||||    
T  4976293 tcaaaagggtcttataattagggacggaggtagta 4976327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 13759447 - 13759485
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  13759447 ttctcaaaagggtcttataattaggaacggaggtagtat 13759485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 16127523 - 16127557
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||| |||||||    
T  16127523 caaaagggtcttataattagggacggatggagtat 16127557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 20142263 - 20142297
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||| |||||    
T  20142263 caaaagggtcttataattagggacggaggtagtat 20142297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 22657805 - 22657767
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  22657805 ttctcaaaaggatcttataattagggacggaggtagtat 22657767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 31657746 - 31657683
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||       || |||||||||||||||||||||||||||| | ||||||    
T  31657746 gtcttataaaaagggacaaattatttttcaaaagggtcttataattagggacggatgtagtatt 31657683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 40643131 - 40643093
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  40643131 ttctcaaaaggatcttataattagggacggaggtagtat 40643093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 5528011 - 5527974
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  5528011 ttctcaaaaaggtcttataattaaggacggagggagta 5527974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 9978623 - 9978664
Alignment:
Q  30 aaaagggtcttataattagggacggagggagtattttctttt 71  Q
    ||||||||| |||||| |||||||||||||||||||| ||||    
T  9978623 aaaagggtcctataataagggacggagggagtattttttttt 9978664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 13660898 - 13660861
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  13660898 ttctcaaaaggatcttataattagagacggagggagta 13660861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 13661124 - 13661157
Alignment:
Q  30 aaaagggtcttataattagggacggagggagtat 63  Q
    |||| |||||||||||||||||||||||||||||    
T  13661124 aaaaaggtcttataattagggacggagggagtat 13661157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 14619286 - 14619249
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  14619286 ttctcaaaagggtcttataattagggacgaaggtagta 14619249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 32964169 - 32964132
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  32964169 tctcaaaatggtcttataattagggacggaggtagtat 32964132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 3686526 - 3686490
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||||||||  ||||||||||||||||||||    
T  3686526 caaaagggtcttatatatagggacggagggagtattt 3686490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 4194942 - 4194978
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  4194942 tcaaaagggtcctataattagggacggaggtagtatt 4194978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 15521714 - 15521678
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||||||||  ||||||||||||||||||||    
T  15521714 caaaagggtcttatatatagggacggagggagtattt 15521678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 24857590 - 24857554
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  24857590 tcaaaagagtcttataattagggacggaggtagtatt 24857554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41687088 - 41687149
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       || |||||||||||||||||||| ||||||||| ||||    
T  41687088 gtcttataaaaagggacaatttttttttcaaaagggtcttataattatggacggaggtagta 41687149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 97)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 45742806 - 45742846
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  45742806 ttctcaaaagggtcttataattagggacggagggagtattt 45742846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 4035862 - 4035824
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4035862 ttctcaaaagggtcttataattagggacggagggagtat 4035824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 17609996 - 17610059
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||       ||||||||||| ||||||||||||||||||||||||||||    
T  17609996 gtcttataaaaagggacaaaaaaattctcaaaaggatcttataattagggacggagggagtatt 17610059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 5375557 - 5375594
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5375557 ttctcaaaagggtcttataattagggacggagggagta 5375594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 5743659 - 5743696
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5743659 ttctcaaaagggtcttataattagggacggagggagta 5743696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 9328240 - 9328277
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9328240 ttctcaaaagggtcttataattagggacggagggagta 9328277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 20455157 - 20455219
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||| |||||    
T  20455157 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataattagggacggaggtagtat 20455219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 30771565 - 30771528
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30771565 ttctcaaaagggtcttataattagggacggagggagta 30771528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 32032993 - 32033030
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32032993 ttctcaaaagggtcttataattagggacggagggagta 32033030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 33413555 - 33413518
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33413555 ttctcaaaagggtcttataattagggacggagggagta 33413518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 34273219 - 34273256
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34273219 ttctcaaaagggtcttataattagggacggagggagta 34273256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 44294826 - 44294789
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44294826 ttctcaaaagggtcttataattagggacggagggagta 44294789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 47806897 - 47806860
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  47806897 ttctcaaaagggtcttataattagggacggagggagta 47806860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 48030350 - 48030309
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatttt 66  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  48030350 ttctcaaaagggtcttataattagggatggagggagtatttt 48030309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 52978019 - 52977982
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  52978019 ttctcaaaagggtcttataattagggacggagggagta 52977982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 6807466 - 6807426
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  6807466 ttctcaaaagggtcttataattagggacagagggagtattt 6807426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 15241541 - 15241480
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       |||||||||| |||||||||||||||||||||||||||    
T  15241541 gtcttataaaaagggacaaaaaaattctcaaaagagtcttataattagggacggagggagta 15241480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20391413 - 20391474
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       || |||||||||||||||||||||||||||||||||||    
T  20391413 gtcttataaaaagggacaaattttttttcaaaagggtcttataattagggacggagggagta 20391474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 20747434 - 20747470
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||||||||||||||||||||||||||||||    
T  20747434 caaaagggtcttataattagggacggagggagtattt 20747470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25708654 - 25708715
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       ||||||||| ||||||||||||||||||||||||||||    
T  25708654 gtcttataaaaagggacaaaaaaattctcaaaaaggtcttataattagggacggagggagta 25708715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 26626003 - 26626039
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||||||||||    
T  26626003 tctcaaaagggtcttataattagggacggagggagta 26626039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 36391891 - 36391851
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  36391891 ttctcaaaagggtcttataattaaggacggagggagtattt 36391851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 45097165 - 45097205
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  45097165 ttctcaaaagggtcttataattagggacggatggagtattt 45097205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 49793128 - 49793088
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  49793128 ttctcaaaagggtcttataattagggacggaggtagtattt 49793088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 53277161 - 53277222
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       |||| |||||||||||||||||||||||||||||||||    
T  53277161 gtcttataaaaagggacaaaaaaattcttaaaagggtcttataattagggacggagggagta 53277222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 56432555 - 56432515
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  56432555 ttctcaaaagggtcttataattagggacggaggtagtattt 56432515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 2615945 - 2615984
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  2615945 ttctcaaaagggtcttatgattagggacggagggagtatt 2615984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 52870681 - 52870642
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  52870681 ttctcaaaagggtcttataattagagacggagggagtatt 52870642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 4416002 - 4415964
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  4416002 ttctcaaaagggtcttataattagggacggaggtagtat 4415964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 24754115 - 24754077
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  24754115 ttctcaaaaggatcttataattagggacggagggagtat 24754077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 28501386 - 28501424
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  28501386 ttctcaaaagggtcttataattagggacggaggtagtat 28501424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 35675923 - 35675957
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||||||||    
T  35675923 tcaaaagggtcttataattagggacggagggagta 35675957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 46950029 - 46949991
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  46950029 ttctcaaaagggtcttataattagggacggaggtagtat 46949991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 1859181 - 1859144
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  1859181 ttctcaaaaaggtcttataattagggacggagggagta 1859144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 4036089 - 4036122
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  4036089 caaaagggtcttataattagggacggagggagta 4036122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 4549662 - 4549629
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  4549662 caaaagggtcttataattagggacggagggagta 4549629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 6753562 - 6753525
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  6753562 ttctcaaaaggatcttataattagggacggagggagta 6753525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 25124246 - 25124283
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  25124246 ttctcaaaagggtcttataattagggacggaggtagta 25124283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 29014097 - 29014064
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  29014097 caaaagggtcttataattagggacggagggagta 29014064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 29520164 - 29520201
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  29520164 ttctcaaaagggtcttataattagggacggaggtagta 29520201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 31937113 - 31937076
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  31937113 ttctcaaaagggtcttataattagggacggaggtagta 31937076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 32899219 - 32899256
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||| |||||    
T  32899219 tctcaaaagggtcttataattagggacggaggtagtat 32899256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 37352605 - 37352547
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggaggga 59  Q
    |||||||||||||||||       ||||||||||||||||||||||| |||||||||||    
T  37352605 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataattaaggacggaggga 37352547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 37357504 - 37357446
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggaggga 59  Q
    |||||||||||||||||       ||||||||||||||||||||||| |||||||||||    
T  37357504 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataattaaggacggaggga 37357446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 43387993 - 43388030
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  43387993 ttctcaaaagggtcttataattagggacggaggaagta 43388030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 47228728 - 47228765
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  47228728 ttctcaaaagggtcttataattagggacggaggaagta 47228765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 49373693 - 49373730
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  49373693 ttctcaaaagggtcttataattagggacggaggtagta 49373730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 53564356 - 53564393
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  53564356 ttctcaaaagggtcttataattagggacggaggtagta 53564393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 53629829 - 53629792
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  53629829 ttctcaaaagggtcttataattagggatggagggagta 53629792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 55632032 - 55631999
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  55632032 caaaagggtcttataattagggacggagggagta 55631999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10588136 - 10588075
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       ||||||||||| | ||||||||||||||||||||||||    
T  10588136 gtcttataaaaagggacaaaaaaattctcaaaaggatgttataattagggacggagggagta 10588075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 18872751 - 18872711
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtattttct 68  Q
    |||||||||||||||||||||||||||||| ||||| ||||    
T  18872751 tcaaaagggtcttataattagggacggaggtagtatattct 18872711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 41620551 - 41620519
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagg 57  Q
    |||||||||||||||||||||||||||||||||    
T  41620551 ttctcaaaagggtcttataattagggacggagg 41620519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 55563128 - 55563164
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||||| ||||    
T  55563128 tctcaaaagggtcttataattagggacggaggtagta 55563164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 1028552 - 1028517
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||| |||||||||||||    
T  1028552 tcaaaagggtcttataattaggaacggagggagtat 1028517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 62
Target Start/End: Complemental strand, 25708451 - 25708420
Alignment:
Q  31 aaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||    
T  25708451 aaagggtcttataattagggacggagggagta 25708420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 28298371 - 28298410
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||| ||||||||||||||||||||| ||||||    
T  28298371 ttctcaaaaggatcttataattagggacggaggtagtatt 28298410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 49228721 - 49228756
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||| ||||||||||||||    
T  49228721 tcaaaagggtcttataattagagacggagggagtat 49228756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 51536432 - 51536475
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtattttctttta 72  Q
    |||||||||||||||  |||||||||||||||||| ||||||||    
T  51536432 caaaagggtcttatatatagggacggagggagtatattctttta 51536475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 54676584 - 54676549
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggag 60  Q
    ||||||||| ||||||||||||||||||||||||||    
T  54676584 ttctcaaaaaggtcttataattagggacggagggag 54676549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 375460 - 375422
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  375460 tctcaaaagggtcttataattaaggacggaggtagtatt 375422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 4549889 - 4549923
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggaggga 59  Q
    |||||||||| ||||||||||||||||||||||||    
T  4549889 ttctcaaaagagtcttataattagggacggaggga 4549923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 5743432 - 5743390
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtattttctttt 71  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||    
T  5743432 caaaatggtcttataattagggacggagggagtagtttatttt 5743390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 7698472 - 7698506
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||| ||||    
T  7698472 tcaaaagggtcttataattagggacggaggtagta 7698506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 26625777 - 26625743
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||| |||||||||||||||||||||||    
T  26625777 tcaaaagggtcctataattagggacggagggagta 26625743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Original strand, 30868801 - 30868831
Alignment:
Q  25 ttctcaaaagggtcttataattagggacgga 55  Q
    |||||||||||||||||||||||||||||||    
T  30868801 ttctcaaaagggtcttataattagggacgga 30868831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 39670989 - 39671023
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||| ||||    
T  39670989 tcaaaagggtcttataattagggacggaggtagta 39671023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 41191628 - 41191666
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  41191628 ttctcaaaagggtcttataattagagacggaggtagtat 41191666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 42528595 - 42528633
Alignment:
Q  27 ctcaaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  42528595 ctcaaaagggtcttataactagggacggaggtagtattt 42528633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 50424854 - 50424888
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggaggga 59  Q
    |||||||||||||||||||||||| ||||||||||    
T  50424854 ttctcaaaagggtcttataattagagacggaggga 50424888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Complemental strand, 55876417 - 55876387
Alignment:
Q  25 ttctcaaaagggtcttataattagggacgga 55  Q
    |||||||||||||||||||||||||||||||    
T  55876417 ttctcaaaagggtcttataattagggacgga 55876387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 2615716 - 2615683
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    |||||||| |||||||||||||||||||||||||    
T  2615716 caaaagggccttataattagggacggagggagta 2615683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 4455097 - 4455060
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  4455097 ttctcaaaagagtcttataattagggacggatggagta 4455060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 17339115 - 17339078
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  17339115 ttctcaaaagggtcttataattagagacggaggtagta 17339078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 19282081 - 19282118
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||| ||||||||||||||||| ||||||||    
T  19282081 ttctcaaaaggatcttataattagggacgtagggagta 19282118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 21265252 - 21265219
Alignment:
Q  30 aaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||| |||||    
T  21265252 aaaagggtcttataattagggacggaggtagtat 21265219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 26866863 - 26866900
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  26866863 ttctcaaaagggtcttataattaaggacggaggtagta 26866900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 30523796 - 30523763
Alignment:
Q  30 aaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||| |||||    
T  30523796 aaaagggtcttataattagggacggaggtagtat 30523763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 39144441 - 39144404
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  39144441 ttcttaaaaggatcttataattagggacggagggagta 39144404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 50352101 - 50352064
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  50352101 ttctcaaaaggatcttataattagagacggagggagta 50352064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 50533921 - 50533884
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  50533921 ttctcaaaatgatcttataattagggacggagggagta 50533884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 54676813 - 54676850
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtatttt 66  Q
    |||||||||||||||  |||||||||||||||||||||    
T  54676813 caaaagggtcttatatatagggacggagggagtatttt 54676850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 55632259 - 55632296
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  55632259 ttctcaaaaggatcttataattagagacggagggagta 55632296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 468505 - 468537
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagg 57  Q
    ||||||||||||||||||||||||| |||||||    
T  468505 ttctcaaaagggtcttataattaggaacggagg 468537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 8343945 - 8343905
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||| ||||||||||||||| ||||| |||||||||    
T  8343945 ttctcaaaaaggtcttataattaggaacggaaggagtattt 8343905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 18882388 - 18882348
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||| ||||||||||||||||||||||  |||||||    
T  18882388 ttctcaaaaaggtcttataattagggacggagatagtattt 18882348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 26889902 - 26889938
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  26889902 tcaaaaggatcttataattagggacggaggtagtatt 26889938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 29508629 - 29508597
Alignment:
Q  31 aaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||| |||||    
T  29508629 aaagggtcttataattagggacggaggtagtat 29508597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 30050087 - 30050123
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  30050087 tcaaaagagtcttataattagggacggaggtagtatt 30050123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 34272991 - 34272955
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||||||||  ||||||||||||||||||||    
T  34272991 caaaagggtcttatatatagggacggagggagtattt 34272955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 36130091 - 36130127
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  36130091 tctcaaaagggtcttataattaggaacggaggtagta 36130127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 36901111 - 36901147
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  36901111 tctcaaaaggatcttataattagggacggaggtagta 36901147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 37173869 - 37173833
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  37173869 tctcaaaagggtcttataattagggacgaaggtagta 37173833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 37518040 - 37518004
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  37518040 tctcaaaagggtcttataattaggaacggaggtagta 37518004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 37522256 - 37522220
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  37522256 tctcaaaagggtcttataattaggaacggaggtagta 37522220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 61
Target Start/End: Original strand, 53630056 - 53630088
Alignment:
Q  29 caaaagggtcttataattagggacggagggagt 61  Q
    ||||||||||||||| |||||||||||||||||    
T  53630056 caaaagggtcttatatttagggacggagggagt 53630088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 54623838 - 54623806
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagg 57  Q
    ||||||||||| |||||||||||||||||||||    
T  54623838 ttctcaaaaggatcttataattagggacggagg 54623806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 65613 - 65677
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||||||||||       ||||||||| |||||||||||||||||||||||||||||||    
T  65613 gtcttataaaaagggacaaaaaaattctcaaaaaggtcttataattagggacggagggagtattt 65677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 65411 - 65378
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  65411 caaaagggtcttataattagggacggagggagta 65378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 86)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 13153965 - 13153926
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13153965 ttctcaaaagggtcttataattagggacggagggagtatt 13153926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 28572083 - 28572044
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28572083 ttctcaaaagggtcttataattagggacggagggagtatt 28572044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 28579676 - 28579637
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28579676 ttctcaaaagggtcttataattagggacggagggagtatt 28579637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 34568527 - 34568488
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34568527 ttctcaaaagggtcttataattagggacggagggagtatt 34568488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 8251933 - 8251971
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8251933 ttctcaaaagggtcttataattagggacggagggagtat 8251971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 18754181 - 18754143
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18754181 ttctcaaaagggtcttataattagggacggagggagtat 18754143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 32675757 - 32675795
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32675757 ttctcaaaagggtcttataattagggacggagggagtat 32675795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 51095 - 51132
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  51095 ttctcaaaagggtcttataattagggacggagggagta 51132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 1774379 - 1774342
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1774379 ttctcaaaagggtcttataattagggacggagggagta 1774342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 2944272 - 2944309
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2944272 ttctcaaaagggtcttataattagggacggagggagta 2944309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 8951428 - 8951465
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8951428 ttctcaaaagggtcttataattagggacggagggagta 8951465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17856752 - 17856814
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||       || ||||||||||||||||||||||||||||||||||||    
T  17856752 gtcttataaaaagggacaatttttttttcaaaagggtcttataattagggacggagggagtat 17856814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 28192175 - 28192212
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28192175 ttctcaaaagggtcttataattagggacggagggagta 28192212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 39029215 - 39029178
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39029215 ttctcaaaagggtcttataattagggacggagggagta 39029178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 44250892 - 44250855
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtatttt 66  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44250892 caaaagggtcttataattagggacggagggagtatttt 44250855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 26016603 - 26016568
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||||||||    
T  26016603 tcaaaagggtcttataattagggacggagggagtat 26016568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 2152240 - 2152278
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  2152240 ttctcaaaagggtcttataattagggacggaggtagtat 2152278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 5593458 - 5593420
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  5593458 ttctcaaaagggtcttataattagggacggaaggagtat 5593420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 12802648 - 12802610
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  12802648 ttctcaaaagggtcttataattagggacggaggtagtat 12802610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 29279460 - 29279494
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||    
T  29279460 caaaagggtcttataattagggacggagggagtat 29279494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 29598261 - 29598223
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  29598261 ttctcaaaagggtcttataattagagacggagggagtat 29598223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 39029439 - 39029477
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatttt 66  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  39029439 tcaaaagggtcctataattagggacggagggagtatttt 39029477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 40529344 - 40529306
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  40529344 ttctcaaaaggatcttataattagggacggagggagtat 40529306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 40530410 - 40530444
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||    
T  40530410 caaaagggtcttataattagggacggagggagtat 40530444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40784952 - 40784889
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||       ||||||||| ||||||||||||||||||||||| ||||||    
T  40784952 gtcttataaaaagggacaaaaaaattctcaaaaaggtcttataattagggacggaggtagtatt 40784889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 42885088 - 42885054
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||||||||    
T  42885088 tcaaaagggtcttataattagggacggagggagta 42885054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 43654203 - 43654241
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  43654203 ttctcaaaagagtcttataattagggacggagggagtat 43654241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 5162341 - 5162304
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  5162341 ttctcaaaagggtcttataattagggacggaggtagta 5162304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 7758909 - 7758946
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||| |||||||||||||||||||||||||||    
T  7758909 ttctcaaaagtgtcttataattagggacggagggagta 7758946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 8948351 - 8948388
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  8948351 ttctcaaaagggtcttataattagggacggatggagta 8948388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 9035539 - 9035576
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  9035539 ttctcaaaatggtcttataattagggacggagggagta 9035576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 11798642 - 11798605
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||| |||||||||    
T  11798642 ttctcaaaagggtcttataattagggacagagggagta 11798605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 11798869 - 11798902
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  11798869 caaaagggtcttataattagggacggagggagta 11798902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 13154192 - 13154225
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  13154192 caaaagggtcttataattagggacggagggagta 13154225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 17069844 - 17069881
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  17069844 ttctcaaaagggtcttataattagggacggaggtagta 17069881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 17578429 - 17578392
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  17578429 ttctcaaaagggtcttataattagggacggaggtagta 17578392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 18455757 - 18455720
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||| |||||||||||||||||||||||||||||||||    
T  18455757 ttcttaaaagggtcttataattagggacggagggagta 18455720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 18641380 - 18641417
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  18641380 ttctcaaaagggtcttataattagggacggaggtagta 18641417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 29806198 - 29806260
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||       ||||||||||||| ||||||||||||||||||| |||||    
T  29806198 gtcttataaaaagggacaaaaaaattctcaaaagggttttataattagggacggaggtagtat 29806260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 34490554 - 34490513
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatttt 66  Q
    ||||||||| | ||||||||||||||||||||||||||||||    
T  34490554 ttctcaaaaagatcttataattagggacggagggagtatttt 34490513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 36177103 - 36177140
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||| |||||||||||||||||||||||||||    
T  36177103 ttctcaaaagagtcttataattagggacggagggagta 36177140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 38878758 - 38878721
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||| |||||||||||||    
T  38878758 ttctcaaaagggtcttataattagagacggagggagta 38878721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 40741302 - 40741265
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  40741302 ttctcaaaagggtattataattagggacggagggagta 40741265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 43653976 - 43653943
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  43653976 caaaagggtcttataattagggacggagggagta 43653943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 44251121 - 44251158
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  44251121 ttctcaaaatggtcttataattagggacggagggagta 44251158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 23688168 - 23688204
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||||||||||||||| ||||||    
T  23688168 tcaaaagggtcttataattagggacggaggtagtatt 23688204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 26016831 - 26016867
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||| |||||||||||||||||||||||||    
T  26016831 tcaaaagggtcctataattagggacggagggagtatt 26016867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 44502656 - 44502620
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||| ||||||||||||||||||||||||||    
T  44502656 tctcaaaaggatcttataattagggacggagggagta 44502620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 73
Target Start/End: Complemental strand, 2944045 - 2944002
Alignment:
Q  30 aaaagggtcttataattagggacggagggagtattttcttttat 73  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||    
T  2944045 aaaagggtcctataattagggacggagggagtattattttttat 2944002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 4631555 - 4631594
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||| ||||||||||||||||||||| ||||||||    
T  4631555 ttctcaaaatggtcttataattagggacggatggagtatt 4631594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 5774085 - 5774046
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  5774085 ttctcaaaagagtcttataattagggacggaggtagtatt 5774046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 6050557 - 6050592
Alignment:
Q  27 ctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||| ||||    
T  6050557 ctcaaaagggtcttataattagggacggaggtagta 6050592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 14584131 - 14584170
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||| ||||||| ||||||    
T  14584131 ttctcaaaagggtcttataattaggaacggaggtagtatt 14584170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 23487098 - 23487063
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||| |||||    
T  23487098 tcaaaagggtcttataattagggacggaggtagtat 23487063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 28191947 - 28191908
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtattttct 68  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  28191947 caaaagggtcttatatatagggacggagggagtattttct 28191908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 28965730 - 28965765
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||| ||||||    
T  28965730 tcaaaagggtcttataattagggacggagagagtat 28965765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 33745872 - 33745932
Alignment:
Q  2 tcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||       ||||||||||| ||||||||||||| ||||||||||||    
T  33745872 tcttataaaaagggacaaaaaaattctcaaaaggatcttataattaggaacggagggagta 33745932  T

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Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Original strand, 33865541 - 33865572
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggag 56  Q
    ||||||||||||||||||||||||||||||||    
T  33865541 ttctcaaaagggtcttataattagggacggag 33865572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 16999030 - 16998996
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||| ||||||||||||||    
T  16999030 tcaaaagggtcttataattatggacggagggagta 16998996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 18111979 - 18112013
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||| |||||    
T  18111979 caaaagggtcttataattagggacggaggtagtat 18112013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 26990599 - 26990565
Alignment:
Q  30 aaaagggtcttataattagggacggagggagtatt 64  Q
    |||| ||||||||||||||||||||||||||||||    
T  26990599 aaaaaggtcttataattagggacggagggagtatt 26990565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 29321294 - 29321332
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  29321294 ttctcaaaagggtcttataattagggatggaggtagtat 29321332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 32475231 - 32475265
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  32475231 caaaagggtcttataattagggacagagggagtat 32475265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 33980526 - 33980463
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||       |||||||||  |||||||||||||||||||||| ||||||    
T  33980526 gtcttataaaaagggacaaaaaatttctcaaaaaagtcttataattagggacggaggtagtatt 33980463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 38781141 - 38781179
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  38781141 ttctcaaaagggtcttataattatggacggaggtagtat 38781179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 40741528 - 40741562
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    ||||| |||||||||||||||||||||||||||||    
T  40741528 caaaatggtcttataattagggacggagggagtat 40741562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 44888714 - 44888680
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||| ||||    
T  44888714 tcaaaagggtcttataattagggacggaggtagta 44888680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 8951200 - 8951163
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtatttt 66  Q
    |||||||||||||||  |||||||||||||||||||||    
T  8951200 caaaagggtcttatatatagggacggagggagtatttt 8951163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 13568906 - 13568943
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  13568906 tctcaaaagggtcttataattaaggacggaggtagtat 13568943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 14699489 - 14699452
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  14699489 ttctcaaaaggatcttataattagggacggaggaagta 14699452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17336480 - 17336426
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacgga 55  Q
    |||||||||||||||||       || ||||||||||||||||||||||||||||    
T  17336480 gtcttataaaaagggacaattattttttcaaaagggtcttataattagggacgga 17336426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 17856550 - 17856517
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||| ||||||||||||||    
T  17856550 caaaagggtcttataattaaggacggagggagta 17856517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 28864280 - 28864247
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||| ||||||||||    
T  28864280 caaaagggtcttataattagggatggagggagta 28864247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35143495 - 35143545
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattaggga 51  Q
    |||||||||||||||||       |||||||||||||||||||||||||||    
T  35143495 gtcttataaaaagggacaaaaatattctcaaaagggtcttataattaggga 35143545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 36408449 - 36408412
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtattt 65  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  36408449 tcaaaaaggtcttataattagggacggaggtagtattt 36408412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 36786504 - 36786467
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  36786504 ttctcaaaaaggtcttataattagggacggaggaagta 36786467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 37023284 - 37023321
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  37023284 ttctcaaaagagtcttataattagggacggaggcagta 37023321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 38183566 - 38183602
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  38183566 ttctcaaaagg-tcttataattagggacggagggagta 38183602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 57
Target Start/End: Original strand, 40785154 - 40785183
Alignment:
Q  28 tcaaaagggtcttataattagggacggagg 57  Q
    ||||||||||||||||||||||||||||||    
T  40785154 tcaaaagggtcttataattagggacggagg 40785183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 44580648 - 44580615
Alignment:
Q  30 aaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||| |||||    
T  44580648 aaaagggtcttataattagggacggaggtagtat 44580615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 45283796 - 45283829
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||| ||||    
T  45283796 caaaagggtcttataattagggacggaggtagta 45283829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 8073130 - 8073166
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  8073130 tctcaaaagggtcttataactagggacggaggtagta 8073166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 62
Target Start/End: Complemental strand, 29279223 - 29279195
Alignment:
Q  34 gggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||    
T  29279223 gggtcttataattagggacggagggagta 29279195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 35179634 - 35179598
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  35179634 tcaaaagagtcttataattagggacggaggtagtatt 35179598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 41014540 - 41014504
Alignment:
Q  26 tctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||| | ||||||||||||||||||||||||||    
T  41014540 tctcaaaaagatcttataattagggacggagggagta 41014504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 44580879 - 44580911
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagg 57  Q
    ||||||||| |||||||||||||||||||||||    
T  44580879 ttctcaaaaaggtcttataattagggacggagg 44580911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 86)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 11741434 - 11741395
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11741434 ttctcaaaagggtcttataattagggacggagggagtatt 11741395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 37951949 - 37951988
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37951949 ttctcaaaagggtcttataattagggacggagggagtatt 37951988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 39497470 - 39497431
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  39497470 ttctcaaaagggtcttataattagggacggagggagtatt 39497431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 4102714 - 4102752
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4102714 ttctcaaaagggtcttataattagggacggagggagtat 4102752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 45039449 - 45039411
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  45039449 ttctcaaaagggtcttataattagggacggagggagtat 45039411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 52431174 - 52431212
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  52431174 ttctcaaaagggtcttataattagggacggagggagtat 52431212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 943637 - 943674
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  943637 ttctcaaaagggtcttataattagggacggagggagta 943674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 1039381 - 1039418
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1039381 ttctcaaaagggtcttataattagggacggagggagta 1039418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 1046287 - 1046324
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1046287 ttctcaaaagggtcttataattagggacggagggagta 1046324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 15811232 - 15811269
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15811232 ttctcaaaagggtcttataattagggacggagggagta 15811269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 23542016 - 23541979
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23542016 ttctcaaaagggtcttataattagggacggagggagta 23541979  T

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Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 25509270 - 25509208
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||| |||||    
T  25509270 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataattagggacggaggtagtat 25509208  T

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Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 30290302 - 30290265
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30290302 ttctcaaaagggtcttataattagggacggagggagta 30290265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 36694891 - 36694854
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36694891 ttctcaaaagggtcttataattagggacggagggagta 36694854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 36710992 - 36710955
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36710992 ttctcaaaagggtcttataattagggacggagggagta 36710955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 39363194 - 39363231
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39363194 ttctcaaaagggtcttataattagggacggagggagta 39363231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 44649666 - 44649629
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44649666 ttctcaaaagggtcttataattagggacggagggagta 44649629  T

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Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 46075867 - 46075904
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  46075867 ttctcaaaagggtcttataattagggacggagggagta 46075904  T

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Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 49907058 - 49907021
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||||||    
T  49907058 ttctcaaaagggtcttataattagggacggagggagta 49907021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14171603 - 14171542
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||||||||    
T  14171603 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataattagagacggagggagta 14171542  T

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Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 30289862 - 30289898
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagt 61  Q
    |||||||||||||||||||||||||||||||||||||    
T  30289862 ttctcaaaagggtcttataattagggacggagggagt 30289898  T

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Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 7763749 - 7763788
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  7763749 ttctcaaaagggtcttataattagggacggaggtagtatt 7763788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 9202278 - 9202243
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  9202278 caaaagggtcttataattagggacggagggagtatt 9202243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 38920273 - 38920238
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||||||||    
T  38920273 tcaaaagggtcttataattagggacggagggagtat 38920238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 41855473 - 41855512
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  41855473 ttctcaaaagggtcttataattagggacggatggagtatt 41855512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 1048025 - 1047991
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||    
T  1048025 caaaagggtcttataattagggacggagggagtat 1047991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 13343810 - 13343776
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggaggga 59  Q
    |||||||||||||||||||||||||||||||||||    
T  13343810 ttctcaaaagggtcttataattagggacggaggga 13343776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 17483767 - 17483729
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatttt 66  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  17483767 tcaaaagggtcttataattagggacggaggtagtatttt 17483729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 27037306 - 27037268
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  27037306 ttctcaaaagggtcttataattagggacggaggtagtat 27037268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 39362967 - 39362933
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||    
T  39362967 caaaagggtcttataattagggacggagggagtat 39362933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 39750154 - 39750120
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||    
T  39750154 caaaagggtcttataattagggacggagggagtat 39750120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 42276161 - 42276199
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  42276161 ttctcaaaagggtcttataattagggacggaggtagtat 42276199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 52602028 - 52601990
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  52602028 ttcttaaaagggtcttataattagggacggagggagtat 52601990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 7784028 - 7783991
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  7784028 ttctcaaaagggtattataattagggacggagggagta 7783991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 7784258 - 7784295
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtatttt 66  Q
    |||||| |||||||||||||||||||||||||||||||    
T  7784258 caaaagagtcttataattagggacggagggagtatttt 7784295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 8104291 - 8104328
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  8104291 tcaaaggggtcttataattagggacggagggagtattt 8104328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 16456673 - 16456636
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||| |||||||||||||||||||||||||||||||    
T  16456673 ttctcagaagggtcttataattagggacggagggagta 16456636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 21290183 - 21290129
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacgga 55  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||||    
T  21290183 gtcttataaaaagggacaatttttttctcaaaagggtcttataattagggacgga 21290129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 23542243 - 23542276
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  23542243 caaaagggtcttataattagggacggagggagta 23542276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 39497697 - 39497730
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  39497697 caaaagggtcttataattagggacggagggagta 39497730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 39750381 - 39750418
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||| |||||||||    
T  39750381 ttctcaaaagggtcttataattagggacagagggagta 39750418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 43456621 - 43456658
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  43456621 ttctcaaaagggtcttataattagggacggaggtagta 43456658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 44646535 - 44646568
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  44646535 caaaagggtcttataattagggacggagggagta 44646568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 44649893 - 44649926
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  44649893 caaaagggtcttataattagggacggagggagta 44649926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 45335922 - 45335885
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  45335922 ttctcaaaagggtcttataattagggagggagggagta 45335885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 16576095 - 16576131
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||| |||||||||||||||||||||||||||||    
T  16576095 tcaaaagagtcttataattagggacggagggagtatt 16576131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 35984435 - 35984399
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||||||||||||||||||||| |||||||||    
T  35984435 caaaagggtcttataattagggacggaaggagtattt 35984399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 50246929 - 50246969
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||||| ||||||||||| |||||||||||||||||    
T  50246929 ttctcaaaaggatcttataattacggacggagggagtattt 50246969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 5765994 - 5766029
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||| ||||||    
T  5765994 caaaagggtcttataattagggacggaggtagtatt 5766029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 9413328 - 9413363
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||| |||||    
T  9413328 tcaaaagggtcttataattagggacggaggtagtat 9413363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 14171793 - 14171828
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||| ||||||||||||||||||||||||    
T  14171793 tcaaaagggtcctataattagggacggagggagtat 14171828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 18237131 - 18237092
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  18237131 ttctcaaaagagtcttataattagggacggaggtagtatt 18237092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 28885876 - 28885841
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||| |||||    
T  28885876 tcaaaagggtcttataattagggacggaggtagtat 28885841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 30289635 - 30289600
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtatt 64  Q
    |||||| |||||||||||||||||||||||||||||    
T  30289635 caaaagagtcttataattagggacggagggagtatt 30289600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 47069052 - 47069087
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||| ||||||||    
T  47069052 caaaagggtcttataattagggacggatggagtatt 47069087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 50008012 - 50007973
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  50008012 ttctcaaaagagtcttataattagggacagagggagtatt 50007973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 2279985 - 2279951
Alignment:
Q  30 aaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||||||||||||| ||||||    
T  2279985 aaaagggtcttataattagggacggaggaagtatt 2279951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 4280129 - 4280163
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||| ||||    
T  4280129 tcaaaagggtcttataattagggacggaggtagta 4280163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Complemental strand, 8472086 - 8472056
Alignment:
Q  25 ttctcaaaagggtcttataattagggacgga 55  Q
    |||||||||||||||||||||||||||||||    
T  8472086 ttctcaaaagggtcttataattagggacgga 8472056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 15811005 - 15810971
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||| |||||||    
T  15811005 caaaagggtcttataattagggacggatggagtat 15810971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 21631110 - 21631144
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||| ||||    
T  21631110 tcaaaagggtcttataattagggacggaggtagta 21631144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 22567103 - 22567065
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  22567103 ttctcaaaaggatcttataattagggacggaggtagtat 22567065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 25227338 - 25227304
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||| ||||    
T  25227338 tcaaaagggtcttataattagggacggaggtagta 25227304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 25283900 - 25283866
Alignment:
Q  33 agggtcttataattagggacggagggagtattttc 67  Q
    ||||||||||||||||||||||||| |||||||||    
T  25283900 agggtcttataattagggacggaggtagtattttc 25283866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 27037533 - 27037567
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||| ||||    
T  27037533 tcaaaagggtcttataattagggacggaggtagta 27037567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 36695118 - 36695152
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||| |||||||||    
T  36695118 tcaaaagggtcttataattagggacagagggagta 36695152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 36711219 - 36711253
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||| |||||||||    
T  36711219 tcaaaagggtcttataattagggacagagggagta 36711253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 38613739 - 38613773
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||| ||||    
T  38613739 tcaaaagggtcttataattagggacggaggtagta 38613773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 41317627 - 41317593
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||| ||||    
T  41317627 tcaaaagggtcttataattagggacggaggtagta 41317593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 42872337 - 42872371
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||| ||||||||||||||||||||    
T  42872337 tcaaaagggtcttacaattagggacggagggagta 42872371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 44646305 - 44646271
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||| ||||||    
T  44646305 tcaaaagggtcttataattagggacggaaggagta 44646271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 50008483 - 50008521
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  50008483 ttctcaaaatgatcttataattagggacggagggagtat 50008521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 50937816 - 50937778
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  50937816 ttctcaaaatggtcttataattagggacggaggtagtat 50937778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 35693328 - 35693365
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  35693328 tcaaaagggtcctataattagggacggaggtagtattt 35693365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 37951722 - 37951689
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    |||||||||| |||||||||||||||||||||||    
T  37951722 caaaagggtcatataattagggacggagggagta 37951689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 38261377 - 38261340
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  38261377 ttctcaaaagggtcttataattaaggacggaggtagta 38261340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 45039676 - 45039709
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||| ||||    
T  45039676 caaaagggtcttataattagggacggaggaagta 45039709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 1427236 - 1427196
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||||||||||||| ||| ||||||||| |||||||    
T  1427236 ttctcaaaagggtcttatatttaaggacggaggtagtattt 1427196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 1767863 - 1767899
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  1767863 tcaaaagggtcttataattagggacgaaggtagtatt 1767899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 6089769 - 6089733
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  6089769 tcaaaagggtcttataattagagacggaggtagtatt 6089733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 10433358 - 10433326
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagg 57  Q
    |||||||||||||| ||||||||||||||||||    
T  10433358 ttctcaaaagggtcctataattagggacggagg 10433326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 11353065 - 11353101
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  11353065 tcaaaagggtcttataattaggaacggaggtagtatt 11353101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15892539 - 15892600
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       || |||||||||||||||||||||| ||||||| ||||    
T  15892539 gtcttataaaaagggacaaaaaaattttcaaaagggtcttataattaggaacggaggtagta 15892600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 31238756 - 31238724
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagg 57  Q
    |||||||| ||||||||||||||||||||||||    
T  31238756 ttctcaaacgggtcttataattagggacggagg 31238724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 45285810 - 45285842
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagg 57  Q
    |||||||||| ||||||||||||||||||||||    
T  45285810 ttctcaaaagagtcttataattagggacggagg 45285842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 48067898 - 48067942
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtattttctttta 72  Q
    ||||||||||||||||||||| |||||||| |||| ||| |||||    
T  48067898 tcaaaagggtcttataattagagacggaggtagtaatttttttta 48067942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 51682 - 51720
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51682 ttctcaaaagggtcttataattagggacggagggagtat 51720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 47677 - 47639
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47677 ttctcaaaagggtcttataattagggacggagggagtat 47639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 47904 - 47937
Alignment:
Q  29 caaaagggtcttataattagggacggagggagta 62  Q
    ||||||| ||||||||||||||||||||||||||    
T  47904 caaaaggatcttataattagggacggagggagta 47937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5212 - 5151
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||    
T  5212 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataattagggacggaggtagta 5151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10158 - 10219
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||    
T  10158 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataattagggacggaggtagta 10219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18558 - 18497
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||    
T  18558 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataattagggacggaggtagta 18497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 18759 - 18793
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||||||||||||||| ||||    
T  18759 tcaaaagggtcttataattagggacggaggtagta 18793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3499 - 3438
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||    
T  3499 gtcttataaaaagggacaaaaaaattctcaaaagggtcttataattagggacggaggtagta 3438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 355334 - 355369
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||||||||||||||||||||||||||||    
T  355334 tcaaaagggtcttataattagggacggagggagtat 355369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 164248 - 164210
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatttt 66  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  164248 tcaaaagggtcttataattagggacggaggtagtatttt 164210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 7140 - 7177
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  7140 ttctcaaaagggtcttataattagggacggaggaagta 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 14348 - 14385
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  14348 ttctcaaaagggtcttataattaaggacggagggagta 14385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 1449 - 1486
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtattt 65  Q
    |||||||||||||||||||||||||||||| |||||||    
T  1449 tcaaaagggtcttataattagggacggaggtagtattt 1486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 48691 - 48654
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  48691 ttctcaaaagggtcttataattagggacggaggtagta 48654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 9426 - 9466
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtattt 65  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  9426 ttctcaaaaggatcttataattagggacggaggtagtattt 9466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 6613 - 6648
Alignment:
Q  29 caaaagggtcttataattagggacggagggagtatt 64  Q
    ||||||||||||||||||||||||||||| ||||||    
T  6613 caaaagggtcttataattagggacggaggtagtatt 6648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 8252 - 8218
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||| ||||||||||||||||||||    
T  8252 tcaaaagggtcttacaattagggacggagggagta 8218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 24630 - 24668
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagtat 63  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  24630 ttctcaaaaggatcttataattaggaacggagggagtat 24668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 117883 - 117846
Alignment:
Q  25 ttctcaaaagggtcttataattagggacggagggagta 62  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  117883 ttctcaaaaggatcttataattagggacggaggaagta 117846  T

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Target: scaffold1283 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 61
Target Start/End: Original strand, 27 - 59
Alignment:
Q  29 caaaagggtcttataattagggacggagggagt 61  Q
    ||||||||||||||| |||||||||||||||||    
T  27 caaaagggtcttatatttagggacggagggagt 59  T

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Target: scaffold0047 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 61828 - 61888
Alignment:
Q  1 gtcttataaaaagggacnnnnnnnttctcaaaagggtcttataattagggacggagggagta 62  Q
    |||||||||||||||||       || |||||| ||||||||||||||||||||||||||||    
T  61828 gtcttataaaaagggacaaattttttttcaaaa-ggtcttataattagggacggagggagta 61888  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 246490 - 246454
Alignment:
Q  28 tcaaaagggtcttataattagggacggagggagtatt 64  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  246490 tcaaaagggtcttataattaggaacggaggtagtatt 246454  T

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