View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14309_low_31 (Length: 224)
Name: NF14309_low_31
Description: NF14309
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14309_low_31 |
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Alignment Details
Target: chr6 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 17 - 206
Target Start/End: Complemental strand, 21019197 - 21019015
Alignment:
| Q |
17 |
aaatttgacaattgaagtgttcccactatcaattattgtttatatccaccatagttgactttcaattacatttgattaagtatcatattttgattgcttt |
116 |
Q |
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| T |
21019197 |
aaatttgacaattgaagtgttcccactatcaattattgtttatatccaccttagttgactttcaattacatttgattaagtatcatattttgattgcttg |
21019098 |
T |
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| Q |
117 |
cccacttcttaaatctttgtttatatatttttcctaactacaaaatggttcttttgatttgaatggctccattaaaatatttttcccttc |
206 |
Q |
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| T |
21019097 |
cccacttcttaaatctttgtttatatatttttcctaaccac-aaatggttcttttgatttcaat------attaaaatatttttcccttc |
21019015 |
T |
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