View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1430_low_1 (Length: 1597)

Name: NF1430_low_1
Description: NF1430
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1430_low_1
NF1430_low_1
[»] chr4 (81 HSPs)
chr4 (326-1362)||(8985553-8986593)
chr4 (17-331)||(8979548-8979862)
chr4 (18-213)||(9031063-9031258)
chr4 (18-150)||(8999929-9000061)
chr4 (1525-1597)||(36629322-36629394)
chr4 (1526-1597)||(39792860-39792931)
chr4 (17-151)||(8929167-8929301)
chr4 (1527-1597)||(25483421-25483491)
chr4 (1524-1597)||(23817679-23817752)
chr4 (1524-1596)||(39404104-39404176)
chr4 (18-181)||(8955213-8955376)
chr4 (17-211)||(8965957-8966152)
chr4 (20-192)||(9014008-9014181)
chr4 (1524-1597)||(54343006-54343079)
chr4 (1525-1597)||(1731646-1731718)
chr4 (1527-1597)||(3340892-3340962)
chr4 (1524-1597)||(10246004-10246077)
chr4 (1524-1597)||(22028367-22028440)
chr4 (1524-1597)||(36608659-36608732)
chr4 (1524-1597)||(41370442-41370515)
chr4 (1524-1597)||(44621087-44621160)
chr4 (1524-1597)||(50002511-50002584)
chr4 (1525-1597)||(39404483-39404555)
chr4 (1525-1597)||(50459806-50459878)
chr4 (1526-1597)||(50630755-50630826)
chr4 (1523-1597)||(49076828-49076902)
chr4 (1527-1597)||(54017596-54017666)
chr4 (1524-1597)||(44620438-44620511)
chr4 (1524-1597)||(44620744-44620817)
chr4 (1531-1597)||(32941128-32941194)
chr4 (1524-1597)||(18932747-18932820)
chr4 (1524-1597)||(54108622-54108694)
chr4 (1524-1597)||(55933122-55933195)
chr4 (1525-1597)||(16889535-16889607)
chr4 (1525-1597)||(34646648-34646720)
chr4 (1526-1597)||(18879891-18879962)
chr4 (1524-1590)||(43174233-43174299)
chr4 (1527-1596)||(4390102-4390171)
chr4 (1536-1597)||(19504781-19504842)
chr4 (1524-1597)||(20825921-20825994)
chr4 (1500-1597)||(22027936-22028032)
chr4 (1524-1597)||(22183262-22183335)
chr4 (1524-1597)||(36572104-36572177)
chr4 (1524-1589)||(43827532-43827597)
chr4 (1534-1591)||(54109003-54109060)
chr4 (1524-1597)||(54936281-54936353)
chr4 (1534-1597)||(52884780-52884844)
chr4 (1523-1597)||(49302991-49303065)
chr4 (1517-1597)||(16888807-16888887)
chr4 (1524-1596)||(45489712-45489784)
chr4 (1553-1597)||(45496890-45496934)
chr4 (1525-1596)||(45489331-45489402)
chr4 (1530-1597)||(31691237-31691306)
chr4 (1455-1500)||(8997951-8997996)
chr4 (1541-1597)||(4955332-4955388)
chr4 (1541-1597)||(15841383-15841439)
chr4 (1521-1597)||(43174592-43174668)
chr4 (1524-1597)||(3271872-3271947)
chr4 (1527-1597)||(3700442-3700512)
chr4 (18-116)||(8900375-8900473)
chr4 (1527-1597)||(34004586-34004656)
chr4 (1526-1596)||(39698944-39699014)
chr4 (1529-1590)||(20826309-20826370)
chr4 (1528-1569)||(23817457-23817498)
chr4 (1528-1597)||(41370743-41370812)
chr4 (1545-1597)||(40067129-40067181)
chr4 (1359-1402)||(8996718-8996761)
chr4 (1533-1572)||(19895406-19895445)
chr4 (1524-1597)||(2740785-2740856)
chr4 (1523-1597)||(3244448-3244522)
chr4 (18-116)||(8914280-8914378)
chr4 (1527-1597)||(51768061-51768131)
chr4 (1524-1597)||(48111696-48111769)
chr4 (1544-1597)||(49880245-49880297)
chr4 (1524-1596)||(3341214-3341286)
chr4 (1524-1568)||(11702297-11702341)
chr4 (1534-1597)||(52884972-52885038)
chr4 (1559-1597)||(6975489-6975527)
chr4 (1104-1161)||(5882550-5882607)
chr4 (1564-1597)||(11197311-11197344)
chr4 (1534-1571)||(19895533-19895570)
[»] chr3 (56 HSPs)
chr3 (1498-1597)||(37990613-37990712)
chr3 (1500-1597)||(37990953-37991050)
chr3 (1500-1597)||(42342364-42342461)
chr3 (1524-1597)||(54018198-54018271)
chr3 (1526-1597)||(42342092-42342163)
chr3 (1526-1597)||(43346793-43346864)
chr3 (1526-1596)||(15772940-15773010)
chr3 (1524-1597)||(22304654-22304727)
chr3 (1524-1597)||(32589788-32589861)
chr3 (1524-1597)||(54017816-54017889)
chr3 (1523-1597)||(31190094-31190168)
chr3 (1527-1597)||(32462903-32462973)
chr3 (1524-1597)||(3135454-3135527)
chr3 (1524-1597)||(12114562-12114635)
chr3 (1532-1597)||(22303963-22304028)
chr3 (1524-1597)||(29644902-29644975)
chr3 (1524-1597)||(35946607-35946680)
chr3 (1524-1597)||(41359491-41359564)
chr3 (1524-1597)||(41359765-41359838)
chr3 (1532-1597)||(39934963-39935028)
chr3 (1524-1597)||(50612447-50612520)
chr3 (1524-1597)||(53577449-53577522)
chr3 (1524-1596)||(33803252-33803324)
chr3 (1499-1597)||(22303633-22303732)
chr3 (1524-1597)||(21832345-21832416)
chr3 (1524-1593)||(25739425-25739494)
chr3 (1524-1597)||(29644581-29644654)
chr3 (1524-1587)||(25755489-25755552)
chr3 (1530-1597)||(15773277-15773346)
chr3 (1527-1597)||(45395656-45395726)
chr3 (1525-1578)||(8328374-8328427)
chr3 (1524-1573)||(22304302-22304351)
chr3 (1524-1597)||(52634760-52634833)
chr3 (1524-1597)||(54017548-54017621)
chr3 (1499-1597)||(1634290-1634387)
chr3 (1523-1597)||(45901799-45901873)
chr3 (1499-1597)||(43978840-43978942)
chr3 (1524-1597)||(53117975-53118048)
chr3 (1524-1596)||(32462558-32462630)
chr3 (1533-1597)||(39389155-39389219)
chr3 (1554-1597)||(39336000-39336043)
chr3 (1550-1595)||(3135099-3135144)
chr3 (1523-1597)||(8327989-8328067)
chr3 (1525-1590)||(11662044-11662108)
chr3 (1524-1593)||(37726585-37726654)
chr3 (1522-1590)||(39914344-39914412)
chr3 (1550-1597)||(47964544-47964591)
chr3 (1524-1597)||(7766783-7766854)
chr3 (1524-1597)||(44160547-44160617)
chr3 (1564-1597)||(11661605-11661638)
chr3 (1524-1597)||(47964915-47964988)
chr3 (1564-1597)||(53596045-53596078)
chr3 (1564-1597)||(53596360-53596393)
chr3 (1541-1597)||(4823740-4823796)
chr3 (1524-1597)||(33175659-33175734)
chr3 (1532-1597)||(49336694-49336760)
[»] chr5 (56 HSPs)
chr5 (1500-1597)||(6500535-6500632)
chr5 (1498-1593)||(40296290-40296384)
chr5 (1524-1597)||(15370184-15370257)
chr5 (1500-1597)||(25328020-25328117)
chr5 (1525-1593)||(36492218-36492286)
chr5 (1524-1597)||(3295345-3295417)
chr5 (1528-1597)||(34753029-34753098)
chr5 (1517-1597)||(6500907-6500987)
chr5 (1524-1596)||(26900017-26900089)
chr5 (1499-1597)||(42405573-42405669)
chr5 (1502-1596)||(41632868-41632961)
chr5 (1500-1593)||(624285-624378)
chr5 (1500-1597)||(1028493-1028590)
chr5 (1528-1597)||(18603124-18603193)
chr5 (1524-1597)||(27502036-27502109)
chr5 (1524-1597)||(41170719-41170792)
chr5 (1526-1597)||(15370487-15370558)
chr5 (1524-1593)||(3295015-3295084)
chr5 (1524-1597)||(32487478-32487551)
chr5 (1538-1597)||(13415774-13415833)
chr5 (1524-1597)||(623903-623976)
chr5 (1524-1597)||(12662652-12662725)
chr5 (1498-1597)||(36568543-36568640)
chr5 (1524-1595)||(38427306-38427377)
chr5 (1523-1597)||(35150091-35150165)
chr5 (1524-1597)||(299574-299647)
chr5 (1524-1597)||(11416977-11417050)
chr5 (1528-1597)||(33747856-33747925)
chr5 (1517-1597)||(6224281-6224361)
chr5 (1533-1597)||(26074155-26074219)
chr5 (1533-1597)||(26074697-26074761)
chr5 (1526-1597)||(301036-301107)
chr5 (1546-1597)||(795254-795305)
chr5 (1499-1597)||(13785608-13785705)
chr5 (18-116)||(20073834-20073932)
chr5 (1524-1597)||(9498655-9498727)
chr5 (1532-1597)||(26590918-26590983)
chr5 (1525-1597)||(24489207-24489279)
chr5 (1531-1597)||(26075168-26075235)
chr5 (1547-1597)||(29549278-29549328)
chr5 (1544-1597)||(5723811-5723864)
chr5 (1532-1597)||(38427632-38427697)
chr5 (24-128)||(9400060-9400164)
chr5 (1524-1591)||(35167838-35167905)
chr5 (1524-1597)||(2411092-2411165)
chr5 (1062-1095)||(22551218-22551251)
chr5 (1564-1597)||(36522277-36522310)
chr5 (1528-1580)||(24489583-24489635)
chr5 (1526-1597)||(42435512-42435583)
chr5 (1548-1584)||(795152-795189)
chr5 (1528-1592)||(5660340-5660405)
chr5 (1544-1589)||(9498343-9498388)
chr5 (1564-1597)||(13042624-13042657)
chr5 (1564-1597)||(13042789-13042822)
chr5 (1564-1597)||(13112787-13112820)
chr5 (1524-1577)||(35150810-35150863)
[»] chr8 (59 HSPs)
chr8 (1524-1597)||(5915952-5916025)
chr8 (1521-1597)||(3670145-3670221)
chr8 (1500-1597)||(34834961-34835056)
chr8 (1524-1597)||(3669772-3669845)
chr8 (1500-1597)||(30441170-30441266)
chr8 (1524-1597)||(40518156-40518229)
chr8 (1526-1597)||(3038292-3038363)
chr8 (1524-1597)||(6876862-6876935)
chr8 (1524-1597)||(8919144-8919217)
chr8 (1517-1597)||(41129073-41129153)
chr8 (1524-1590)||(40579269-40579335)
chr8 (1524-1597)||(6651579-6651652)
chr8 (1528-1597)||(9483191-9483260)
chr8 (1524-1597)||(34835294-34835367)
chr8 (1524-1597)||(34835560-34835633)
chr8 (1524-1597)||(34835826-34835899)
chr8 (1500-1597)||(40518667-40518763)
chr8 (1524-1597)||(45122709-45122782)
chr8 (1524-1596)||(37544490-37544562)
chr8 (1534-1597)||(45122067-45122130)
chr8 (1523-1597)||(9608830-9608904)
chr8 (1532-1597)||(1014253-1014318)
chr8 (1525-1597)||(33113368-33113440)
chr8 (1522-1597)||(6731980-6732055)
chr8 (1526-1597)||(20870575-20870646)
chr8 (1513-1597)||(25561803-25561889)
chr8 (1524-1597)||(1513915-1513988)
chr8 (1524-1597)||(8918764-8918837)
chr8 (1534-1597)||(147905-147968)
chr8 (1528-1583)||(9482608-9482663)
chr8 (1534-1597)||(32640542-32640605)
chr8 (1523-1597)||(30359356-30359430)
chr8 (1530-1596)||(40579512-40579578)
chr8 (1528-1597)||(30359694-30359763)
chr8 (1533-1597)||(12283957-12284021)
chr8 (1528-1596)||(18371998-18372066)
chr8 (1524-1588)||(43274635-43274699)
chr8 (1517-1597)||(45121903-45121983)
chr8 (1524-1597)||(45123089-45123164)
chr8 (1527-1597)||(70277-70347)
chr8 (1531-1597)||(45121663-45121729)
chr8 (1524-1597)||(147536-147609)
chr8 (1524-1597)||(9309440-9309512)
chr8 (1528-1597)||(18371665-18371734)
chr8 (1527-1588)||(41972255-41972316)
chr8 (1544-1596)||(16524451-16524503)
chr8 (1532-1591)||(1013879-1013938)
chr8 (1524-1571)||(3037969-3038016)
chr8 (1531-1597)||(9507867-9507933)
chr8 (1545-1597)||(9609170-9609222)
chr8 (1541-1597)||(20995433-20995489)
chr8 (1526-1597)||(5420736-5420807)
chr8 (1524-1579)||(9309085-9309139)
chr8 (1528-1582)||(18372288-18372342)
chr8 (1534-1594)||(4154678-4154736)
chr8 (1525-1597)||(18380020-18380090)
chr8 (1258-1345)||(36675957-36676041)
chr8 (1105-1162)||(35143789-35143847)
chr8 (1524-1597)||(32305562-32305635)
[»] chr6 (41 HSPs)
chr6 (1524-1597)||(29518588-29518661)
chr6 (1524-1597)||(29519005-29519078)
chr6 (1524-1597)||(32741264-32741337)
chr6 (1524-1597)||(2578443-2578516)
chr6 (1524-1597)||(2843640-2843713)
chr6 (1524-1597)||(16454992-16455065)
chr6 (1517-1597)||(2578828-2578908)
chr6 (1524-1590)||(3409752-3409818)
chr6 (1524-1597)||(1846833-1846906)
chr6 (1524-1597)||(2378211-2378284)
chr6 (1524-1597)||(2579872-2579945)
chr6 (1501-1597)||(10074341-10074436)
chr6 (1517-1597)||(12071684-12071764)
chr6 (1534-1597)||(3409344-3409407)
chr6 (1523-1597)||(35210289-35210363)
chr6 (1524-1597)||(2377839-2377912)
chr6 (1499-1597)||(3415543-3415642)
chr6 (1524-1597)||(5832027-5832100)
chr6 (1524-1597)||(16454660-16454733)
chr6 (1524-1596)||(2579109-2579181)
chr6 (1533-1597)||(16107763-16107827)
chr6 (1522-1597)||(10073989-10074064)
chr6 (1524-1596)||(14748342-14748410)
chr6 (1532-1597)||(2579500-2579565)
chr6 (1524-1597)||(3058311-3058384)
chr6 (1517-1597)||(12085027-12085107)
chr6 (1526-1597)||(10073618-10073689)
chr6 (1527-1597)||(6999799-6999869)
chr6 (1524-1597)||(1127445-1127518)
chr6 (1534-1597)||(26544134-26544197)
chr6 (1525-1583)||(16108150-16108208)
chr6 (1501-1597)||(31714754-31714849)
chr6 (1531-1578)||(3409405-3409452)
chr6 (1539-1597)||(1950200-1950258)
chr6 (1524-1597)||(593707-593782)
chr6 (1532-1590)||(10902438-10902496)
chr6 (1523-1597)||(12092481-12092555)
chr6 (1528-1597)||(10911651-10911720)
chr6 (1563-1597)||(8482011-8482045)
chr6 (1510-1591)||(17135055-17135136)
chr6 (1500-1597)||(30618595-30618690)
[»] chr1 (58 HSPs)
chr1 (1498-1596)||(41157077-41157177)
chr1 (1523-1597)||(3537598-3537672)
chr1 (1500-1597)||(9955994-9956090)
chr1 (1524-1597)||(41759568-41759641)
chr1 (1499-1593)||(32168673-32168767)
chr1 (1524-1597)||(26661522-26661595)
chr1 (1524-1597)||(34649523-34649596)
chr1 (1533-1597)||(37555814-37555878)
chr1 (1533-1597)||(37556196-37556260)
chr1 (1498-1597)||(5319941-5320038)
chr1 (1518-1597)||(45084461-45084540)
chr1 (1524-1597)||(41142457-41142531)
chr1 (1524-1597)||(44290824-44290898)
chr1 (1527-1597)||(48588491-48588561)
chr1 (1524-1597)||(11977029-11977102)
chr1 (1524-1597)||(11977365-11977438)
chr1 (1524-1597)||(14318952-14319025)
chr1 (1524-1597)||(31767161-31767234)
chr1 (1502-1593)||(41157464-41157557)
chr1 (1524-1597)||(44290458-44290531)
chr1 (1532-1597)||(40082491-40082556)
chr1 (1524-1597)||(45493974-45494047)
chr1 (1521-1596)||(37850597-37850672)
chr1 (1531-1597)||(24600321-24600387)
chr1 (1547-1597)||(26661921-26661971)
chr1 (1539-1597)||(38804370-38804428)
chr1 (1500-1597)||(22077472-22077568)
chr1 (1524-1597)||(39066201-39066273)
chr1 (1524-1597)||(50051689-50051761)
chr1 (1526-1597)||(3875333-3875404)
chr1 (1527-1597)||(17294662-17294733)
chr1 (1534-1597)||(45839716-45839779)
chr1 (1523-1597)||(34364592-34364666)
chr1 (1528-1597)||(66476-66545)
chr1 (1500-1596)||(5575190-5575284)
chr1 (1524-1597)||(29798284-29798357)
chr1 (1524-1597)||(50052024-50052096)
chr1 (1523-1583)||(21378058-21378118)
chr1 (1528-1597)||(3550805-3550871)
chr1 (1523-1597)||(34365010-34365084)
chr1 (1500-1595)||(22077806-22077900)
chr1 (1523-1597)||(19283454-19283528)
chr1 (1517-1595)||(22077103-22077181)
chr1 (1524-1597)||(41184408-41184484)
chr1 (1556-1597)||(32594748-32594789)
chr1 (1524-1583)||(4266798-4266855)
chr1 (1530-1597)||(22793364-22793431)
chr1 (1498-1597)||(47380141-47380240)
chr1 (1522-1596)||(5996870-5996944)
chr1 (1532-1597)||(5528762-5528827)
chr1 (1530-1579)||(24131994-24132043)
chr1 (1499-1597)||(66063-66160)
chr1 (999-1067)||(9376158-9376226)
chr1 (1562-1597)||(44043810-44043845)
chr1 (1525-1596)||(44091980-44092051)
chr1 (1525-1590)||(9499071-9499136)
chr1 (1564-1597)||(12466368-12466401)
chr1 (1500-1597)||(30630614-30630711)
[»] chr7 (50 HSPs)
chr7 (1524-1597)||(1085616-1085689)
chr7 (1524-1597)||(37533364-37533437)
chr7 (1524-1597)||(47129454-47129527)
chr7 (1526-1597)||(37167866-37167937)
chr7 (1524-1597)||(23377-23450)
chr7 (1500-1597)||(7517665-7517762)
chr7 (1524-1597)||(40094774-40094847)
chr7 (1524-1597)||(45433326-45433399)
chr7 (1526-1597)||(34218036-34218107)
chr7 (1535-1597)||(45754800-45754862)
chr7 (1524-1597)||(6054645-6054718)
chr7 (1524-1597)||(11845276-11845349)
chr7 (1525-1597)||(28300569-28300642)
chr7 (1500-1597)||(29157650-29157747)
chr7 (1524-1597)||(30244355-30244428)
chr7 (1526-1594)||(37532753-37532821)
chr7 (1526-1597)||(9901728-9901799)
chr7 (1534-1597)||(19122816-19122879)
chr7 (1496-1595)||(118273-118372)
chr7 (1524-1597)||(22567039-22567112)
chr7 (1524-1597)||(30032652-30032725)
chr7 (1524-1597)||(37533011-37533083)
chr7 (1499-1597)||(28300228-28300326)
chr7 (1532-1597)||(36939741-36939806)
chr7 (1524-1597)||(45434721-45434794)
chr7 (1524-1597)||(30245162-30245231)
chr7 (1524-1597)||(30253577-30253646)
chr7 (1498-1581)||(30244453-30244535)
chr7 (1498-1581)||(30253671-30253753)
chr7 (1524-1597)||(8128441-8128514)
chr7 (1524-1597)||(24177520-24177593)
chr7 (1500-1581)||(30245256-30245336)
chr7 (1524-1597)||(41854719-41854792)
chr7 (1524-1596)||(47129181-47129253)
chr7 (1527-1597)||(14681595-14681663)
chr7 (1547-1597)||(24838724-24838774)
chr7 (1499-1572)||(7517767-7517840)
chr7 (1499-1572)||(7518033-7518106)
chr7 (1553-1597)||(7554110-7554154)
chr7 (1525-1597)||(36623045-36623117)
chr7 (1527-1597)||(20599399-20599471)
chr7 (1528-1597)||(40230295-40230364)
chr7 (1537-1590)||(45755019-45755072)
chr7 (1556-1597)||(1085280-1085321)
chr7 (1535-1596)||(40094424-40094485)
chr7 (1062-1139)||(37952690-37952766)
chr7 (1530-1590)||(41910592-41910652)
chr7 (1533-1587)||(4719305-4719359)
chr7 (1524-1597)||(15902385-15902457)
chr7 (1564-1597)||(21416181-21416214)
[»] chr2 (42 HSPs)
chr2 (1524-1597)||(6422195-6422268)
chr2 (1524-1597)||(36178605-36178678)
chr2 (1527-1597)||(962683-962753)
chr2 (1524-1593)||(6421474-6421543)
chr2 (1524-1597)||(6421816-6421889)
chr2 (1524-1597)||(15511495-15511568)
chr2 (1524-1597)||(37106009-37106082)
chr2 (1501-1597)||(3672786-3672882)
chr2 (1526-1597)||(37106273-37106344)
chr2 (1495-1597)||(41283446-41283548)
chr2 (1524-1597)||(5542625-5542698)
chr2 (1500-1597)||(14745643-14745740)
chr2 (1524-1597)||(35580724-35580797)
chr2 (1524-1597)||(36178171-36178244)
chr2 (1524-1597)||(42514734-42514807)
chr2 (1530-1597)||(15880348-15880415)
chr2 (1498-1596)||(3673154-3673251)
chr2 (1527-1597)||(23346321-23346391)
chr2 (1531-1597)||(36005887-36005953)
chr2 (1528-1597)||(5543002-5543071)
chr2 (1535-1596)||(40163383-40163444)
chr2 (1524-1597)||(40733967-40734040)
chr2 (1526-1597)||(33731733-33731804)
chr2 (1528-1594)||(6421714-6421780)
chr2 (1524-1590)||(6713069-6713135)
chr2 (1524-1590)||(29676621-29676687)
chr2 (1527-1597)||(40679632-40679702)
chr2 (1499-1596)||(37632574-37632669)
chr2 (1524-1597)||(40733602-40733675)
chr2 (1538-1597)||(5367540-5367599)
chr2 (1525-1597)||(38796619-38796693)
chr2 (1523-1597)||(7598313-7598387)
chr2 (1534-1583)||(1769991-1770040)
chr2 (1529-1597)||(7598686-7598754)
chr2 (1524-1592)||(31899102-31899170)
chr2 (1531-1597)||(14745300-14745367)
chr2 (1537-1597)||(36784273-36784333)
chr2 (1543-1597)||(28254258-28254310)
chr2 (1500-1597)||(30313262-30313358)
chr2 (1525-1597)||(29676993-29677065)
chr2 (1498-1597)||(16590968-16591067)
chr2 (1526-1597)||(28531316-28531387)
[»] scaffold0702 (2 HSPs)
scaffold0702 (1524-1597)||(514-587)
scaffold0702 (1524-1585)||(147-208)
[»] scaffold0391 (2 HSPs)
scaffold0391 (1528-1597)||(1110-1179)
scaffold0391 (1564-1597)||(1731-1764)
[»] scaffold0734 (2 HSPs)
scaffold0734 (1533-1590)||(5489-5546)
scaffold0734 (1533-1590)||(5874-5931)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1524-1597)||(47445-47518)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1531-1597)||(5067-5133)


Alignment Details
Target: chr4 (Bit Score: 722; Significance: 0; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 722; E-Value: 0
Query Start/End: Original strand, 326 - 1362
Target Start/End: Original strand, 8985553 - 8986593
Alignment:
Q  326 aaaaatcacgtttgattttaaaaaagtcttgaaattaaacttgtttcataatttaaaatacttagaatgtaaataatctgcttcttgagttggaacaagg 425  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8985553 aaaaatcacgtttgattttaaaaatgtcttgaaattaaacttgtttcataaattaaaatacttagaatgtaaataatctgcttcttgagttggaacaagg 8985652  T
Q  426 gggatatagcgatatagcagcgtgtggaagcctttttcgtaatttagatggacggtagatcaaaggttacataaaaaagattggcttgtttgatgccnnn 525  Q
    || | ||||||||||||||||||||| ||||||||| |||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||       
T  8985653 ggaa-atagcgatatagcagcgtgtg-aagccttttacgtaatttagatgggcgatggatcaaaggttacataaaaaagattggcttgtttgatgccctt 8985750  T
Q  526 nnnn-ctgtatcctttagagtatatggaagcaaagaaataatatgatttgga--gtgataaagttaatgaaaccaatgtggtggacagagcaaaacatat 622  Q
         |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||    
T  8985751 tttttctgtatcctttagagtatatggaagcaaagaaataatatgatttggaaagtgataaagttaatgaagccaatgtggtggacagagcaaaacatat 8985850  T
Q  623 gcttgaccaatggttggcaactcaaatgg-----aattcagtgaatgcacctataatacatgttggaagggcaaaacggttgaagccacaataagggata 717  Q
    ||||||||| |||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||    
T  8985851 gcttgaccagtggttggcaactcaaatggtacacaattcagtgaatgcacctataatacatgttggaagggcaaaacggttgaagccacaacaaatgata 8985950  T
Q  718 tttaaatgtaatgtagatgcatctttttccaaagaggataaaaaagttgggatcggtatgtgcattcca-gattatacatgaacttttgttttggctaga 816  Q
    ||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  8985951 tttaaatgtaatgtagatgcatcctttttcaaagaggataacaaagttgggatcggtatgtgcattccaagattatacataaacttttgctttggctaga 8986050  T
Q  817 acataatggtttagtccaatctgtgatgttcatatatagatgaagctcttggtctctctcagctttagaatggctccatgagttacatttgggacccata 916  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8986051 acataatggtttagttcaatttgtgatgttcatatatagatgaagctcttggtctctctcagcattagaatggctccatgagttacatttgggacccata 8986150  T
Q  917 gattttaggatagatgcaaagagagtggtcgataattttttctcaataaagactaacattattgaacttggatatataatgcaaaaacgtagaactctct 1016  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||    
T  8986151 gattttaggacggatgcaaagagagtggtcgataattttttctcaataaagattaacattactgaacttggatgtataatgcaaaaacgtagaactctct 8986250  T
Q  1017 ttatccattattatctaaactttagtgtcgagtttgtggaaagacaaacaaaatattttgcagggatctttttctacaannnnnnnnacagggactaaaa 1116  Q
    ||| ||| |||||| ||||||  |||||||||||||| |  ||||||||||||||||||||| | ||||||||||||||        ||||| |||||||    
T  8986251 ttagccagtattatgtaaactccagtgtcgagtttgttgggagacaaacaaaatattttgca-gaatctttttctacaattttttttacaggaactaaaa 8986349  T
Q  1117 ccaaagcaaggcatatttacaggataagaaccatattttaacctataaatcaattaattcttttaaacaatatgatttgtactgtcttgcttatggatta 1216  Q
      |||  |||||||||||  |||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||    
T  8986350 ttaaaataaggcatatttgtaggatttcaaccatattttaacctataaatcaattaattcttttaaacaatatcatttgtactgtctgggttatggatta 8986449  T
Q  1217 ctacaaaaatattctccaccaactgccttctaccaatactgtatataatttgcagtggtgctctcctgcaacaataaaaactaggagtggtatcaaacta 1316  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8986450 ctac-aaaatattctccaccaactcccttctaccaatactgtatataatttgcagtggtgctctcctgcaacaataaaaactaggagtggtatcaaacta 8986548  T
Q  1317 ggttgggttatatgtaacatcctttgaaaatatttcgcgtgaattc 1362  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  8986549 ggtt-ggttatatgtaacatcctttgaaaatatttcgcgtgaattc 8986593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 17 - 331
Target Start/End: Original strand, 8979548 - 8979862
Alignment:
Q  17 taatcttctctattcttttgattggaaattgccacaaggtttggaaaaggaagatattgataccgaaatgttgccagggatcactcagcacaagaagaat 116  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8979548 taatcttctctattcttttgattggaaattgccacaaggtttagaaaaggaagatattgataccgaaatgttgccagggatcactcaacacaagaagaat 8979647  T
Q  117 cctctttaccttgttcccaatatccctatttagatgtatccctttatgttaactttgttagtttcatgtttaatatactgtttattaagctttttatgtt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8979648 cctctttaccttgttcccaatatccctatttagatgtatccctttatgttaactttgttagtttcatgtttaatatactgtttattaagctttttatgtt 8979747  T
Q  217 gctctactatttgaatttgaaaaaagagaaaatcagttactttgaatttgtaatacaagaagaatcctctttgaatttgtaaagtggtcgaatgtaaatg 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8979748 gctctactatttgaatttgaaaaaagagaaaatcagttactttgaatttgtaatacaagaagaatcatctttgaatttgtaaagtggtcgaatgtaaatg 8979847  T
Q  317 atttgaataaaaaat 331  Q
    |||||||||||||||    
T  8979848 atttgaataaaaaat 8979862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 18 - 213
Target Start/End: Original strand, 9031063 - 9031258
Alignment:
Q  18 aatcttctctattcttttgattggaaattgccacaaggtttggaaaaggaagatattgataccgaaatgttgccagggatcactcagcacaagaagaatc 117  Q
    |||||||| ||||| |||||||||||||| ||| | || |||| ||||||||||||||||||   |||| |||||||||||||||| |||||||||||||    
T  9031063 aatcttctttattcatttgattggaaattaccagatgggttggtaaaggaagatattgatacatcaatgctgccagggatcactcaacacaagaagaatc 9031162  T
Q  118 ctctttaccttgttcccaatatccctatttagatgtatccctttat-gttaactttgttagtttcatgtttaatatactgtttattaagctttttat 213  Q
    |||||| ||||||| | || |||||||| |||||| |||||||||| ||  ||| |||| ||||| |||||| |||| ||||||| |||||||||||    
T  9031163 ctctttgccttgttgctaagatccctatgtagatgcatccctttatagtatactatgttggtttcttgtttattata-tgtttatcaagctttttat 9031258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 5e-35
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 9000061 - 8999929
Alignment:
Q  18 aatcttctctattcttttgattggaaattgccacaaggtttggaaaaggaagatattgataccgaaatgttgccagggatcactcagcacaagaagaatc 117  Q
    |||||||| ||||| |||||||||||||||||||| ||    | |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  9000061 aatcttctttattcatttgattggaaattgccacatggaacagtaaaggaagatattgatactgaaatgttgccagggatcactcaacacaagaagaatc 8999962  T
Q  118 ctctttaccttgttcccaatatccctatttaga 150  Q
    |||||| ||||||| |||| |||||||| ||||    
T  8999961 ctctttgccttgttgccaagatccctatgtaga 8999929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 1525 - 1597
Target Start/End: Complemental strand, 36629394 - 36629322
Alignment:
Q  1525 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36629394 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 36629322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 5e-32
Query Start/End: Original strand, 1526 - 1597
Target Start/End: Original strand, 39792860 - 39792931
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39792860 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 39792931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 2e-31
Query Start/End: Original strand, 17 - 151
Target Start/End: Complemental strand, 8929301 - 8929167
Alignment:
Q  17 taatcttctctattcttttgattggaaattgccacaaggtttggaaaaggaagatattgataccgaaatgttgccagggatcactcagcacaagaagaat 116  Q
    ||||||||||||||| ||||||||| |||| ||||| || |||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  8929301 taatcttctctattcatttgattgggaattaccacatgggttggtaaaggaagatattgatacagaaatgttgccagggatcactcaacacaagaagaat 8929202  T
Q  117 cctctttaccttgttcccaatatccctatttagat 151  Q
    | ||| | ||||||  ||||  ||||||| |||||    
T  8929201 catctctgccttgtagccaaagtccctatgtagat 8929167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 2e-31
Query Start/End: Original strand, 1527 - 1597
Target Start/End: Complemental strand, 25483491 - 25483421
Alignment:
Q  1527 gaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25483491 gaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 25483421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 8e-31
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 23817679 - 23817752
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23817679 ggggaccgtccacatcgaggctagaacaaccacactagcaagagagacaccacactcttacccaaaaccttaag 23817752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 3e-30
Query Start/End: Original strand, 1524 - 1596
Target Start/End: Complemental strand, 39404176 - 39404104
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39404176 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacgccacactcttacccaaaaccttaa 39404104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 8955213 - 8955376
Alignment:
Q  18 aatcttctctattcttttgattggaaattgccacaaggtttggaaaaggaagatattgataccgaaatgttgccagggatcactcagcacaagaagaatc 117  Q
    |||||||||||||| ||||||||||  || ||| | || |||| ||| |||||| ||||||| |||||| |||||||||||||||| |||||||||||||    
T  8955213 aatcttctctattcatttgattggagcttaccagatgggttggtaaaagaagatgttgatacagaaatgctgccagggatcactcaacacaagaagaatc 8955312  T
Q  118 ctctttaccttgttcccaatatccctatttagatgtatccctttatgttaactttgttagtttc 181  Q
    ||||||||||| |  |||| |||||||  |||||  |||||||||| |||||| |||| |||||    
T  8955313 ctctttaccttatagccaagatccctaagtagatacatccctttatattaactatgttggtttc 8955376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 8966152 - 8965957
Alignment:
Q  17 taatcttctctattcttttgattggaaattgccacaaggtttggaaaaggaagatattgataccgaaatgttgccagggatcactcagcacaagaagaat 116  Q
    ||||||||| ||||||||||||||||| || ||||| || |||| |||||||||||||||||| |||| |||||| ||||||||||| ||||||||||||    
T  8966152 taatcttctttattcttttgattggaagttaccacatggattggtaaaggaagatattgatactgaaacgttgcctgggatcactcaacacaagaagaat 8966053  T
Q  117 cctctttaccttgttcccaatatccctatttagatgtatccctttatgttaactttgttagtttcatgtttaatatac--tgtttattaagcttttt 211  Q
    ||||| |  || ||| |||| ||  |||| |||||  |||||||||| | |||| | |||||||| ||||| |||| |  |||||||||| ||||||    
T  8966052 cctctctgtctggttgccaagattactatgtagattcatccctttatttcaactct-ttagtttcttgtttgatatgctatgtttattaaacttttt 8965957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 9014008 - 9014181
Alignment:
Q  20 tcttctctattcttttgattggaaattgccacaaggtttggaaaaggaagatattgataccgaaatgttgccagggatcactcagcacaagaagaatcct 119  Q
    |||||| ||||| ||| |||||||||||||||| ||      |||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  9014008 tcttctttattcatttaattggaaattgccacatggaacactaaagaaagatattgatactgaaatgttgccagggatcactcaacacaagaagaatcct 9014107  T
Q  120 ctttaccttgttcccaatatccctatttagatgtat-ccctttatgttaactttgttagtttcatgtttaatat 192  Q
    |||| ||||||| |||| |||||||| |||| | ||  |||||||  | ||| |||| ||||||||||||||||    
T  9014108 ctttgccttgttgccaagatccctatgtagacgcatgacctttatcgtgactatgttggtttcatgtttaatat 9014181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 54343006 - 54343079
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  54343006 ggggaccatccacatcgaggctagaacaaccactcaagcaagagagacaccacactcttacccaaaaccttaag 54343079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 8e-28
Query Start/End: Original strand, 1525 - 1597
Target Start/End: Original strand, 1731646 - 1731718
Alignment:
Q  1525 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1731646 gggaccgtccacattgaggctagaacaaccacacaagcaagagaaacaccacactcttacccaaaaccttaag 1731718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 1527 - 1597
Target Start/End: Complemental strand, 3340962 - 3340892
Alignment:
Q  1527 gaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  3340962 gaccgtccacatcgaggctagaacaaccccacaagcaagaaagacaccacactcttacccaaaaccttaag 3340892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 10246077 - 10246004
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  10246077 ggggagcgtccacatcgaggctagaacaaccagacaagcaagggagacaccacactcttacccaaaaccttaag 10246004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 22028367 - 22028440
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  22028367 ggggaccgtccacattgaggctagaacaacctcacaagcaagagagacaccacactcttacccaaaacattaag 22028440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 36608659 - 36608732
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  36608659 ggggaccgtccacatcgaggctagaacaaccacactagtgagagagacaccacactcttacccaaaaccttaag 36608732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 41370515 - 41370442
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||    
T  41370515 ggggaccgtccacatcgaggctagaacaaccactcaagcaagagagacactacactcttacccaaaactttaag 41370442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 44621160 - 44621087
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||    
T  44621160 ggggaccgtccacatcgaggctagaataaccgcacaagcaagagaaacaccacactcttacccaaaaccttaag 44621087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 50002584 - 50002511
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  50002584 ggggaccgcccacatcgaggctagaacaaccgcacaagtaagagagacaccacactcttacccaaaaccttaag 50002511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 1525 - 1597
Target Start/End: Complemental strand, 39404555 - 39404483
Alignment:
Q  1525 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  39404555 gggaccgttcacatcgaggctagaacaaccacacaagcaagagagacaccacattcttgcccaaaaccttaag 39404483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 1525 - 1597
Target Start/End: Complemental strand, 50459878 - 50459806
Alignment:
Q  1525 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  50459878 gggaccgtgcacatcgaggctagaacaaccacacaagcaagagagacaccacgctcttacctaaaaccttaag 50459806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 7e-25
Query Start/End: Original strand, 1526 - 1597
Target Start/End: Original strand, 50630755 - 50630826
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  50630755 ggaccgcccacatcgaggctaaaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaag 50630826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1523 - 1597
Target Start/End: Original strand, 49076828 - 49076902
Alignment:
Q  1523 aggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||    
T  49076828 aggggacagtccacatcgaggctagaacaaccgcacaagcaagaaagacaccacactctaacccaaaaccttaag 49076902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1527 - 1597
Target Start/End: Original strand, 54017596 - 54017666
Alignment:
Q  1527 gaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||    
T  54017596 gaccgtccacatcgaggctagaacaaccacataagcaagagagacatcacactcttacctaaaaccttaag 54017666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 44620511 - 44620438
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  44620511 ggggaccgtccacatcaaggttagaacaaccacacaagcaagagaaacatcacactcttacccaaaaccttaag 44620438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 44620817 - 44620744
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||| || ||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  44620817 ggggaccgtccacatcgaggatataacaaccgcacaagcaagagagaaaccacactcttacccaaaaccttaag 44620744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 7e-22
Query Start/End: Original strand, 1531 - 1597
Target Start/End: Original strand, 32941128 - 32941194
Alignment:
Q  1531 gtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||    
T  32941128 gtccacatcgaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaaccttaag 32941194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 18932747 - 18932820
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||| ||||||||||||| ||||||||| |||| ||||||||||||||||||||||| |||||||||||    
T  18932747 ggggaccgtacacatcgaggctataacaaccactcaagtaagagagacaccacactcttacctaaaaccttaag 18932820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 54108694 - 54108622
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  54108694 ggggaccg-ccacattgaggctagaacaaccacacaagcaagatagacaccacactcttagccaaaaccttaag 54108622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 55933122 - 55933195
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||   ||||| ||||||||||||||||||||||||||||| |||||    
T  55933122 ggggaccgtccacatcgaggctagaacaactgtacaagtaagagagacaccacactcttacccaaaactttaag 55933195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1525 - 1597
Target Start/End: Original strand, 16889535 - 16889607
Alignment:
Q  1525 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||||||||| |||||    
T  16889535 gggaccgtccacatcgaggttagaacaatcacacaaggaagagagacaccatactcttacccaaaactttaag 16889607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1525 - 1597
Target Start/End: Original strand, 34646648 - 34646720
Alignment:
Q  1525 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||| | |||||||||||||||||||  | ||||||||||||||||||||||||||||||||||    
T  34646648 gggaccgtccacaacaaggctagaacaaccacacagaccagagagacaccacactcttacccaaaaccttaag 34646720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1526 - 1597
Target Start/End: Complemental strand, 18879962 - 18879891
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||| |||||||||||||||||| ||| ||||||  ||||||||||||||||||||||||    
T  18879962 ggaccgtccacatcgaagctagaacaaccacacaaccaaaagagacgtcacactcttacccaaaaccttaag 18879891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1524 - 1590
Target Start/End: Complemental strand, 43174299 - 43174233
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaa 1590  Q
    |||||||||||||||| ||||| |||||||||||||||  |||||||||||||||||||||||||||    
T  43174299 ggggaccgtccacatcaaggcttgaacaaccacacaagtgagagagacaccacactcttacccaaaa 43174233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1527 - 1596
Target Start/End: Original strand, 4390102 - 4390171
Alignment:
Q  1527 gaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||  |||||||||||||||||||||||    
T  4390102 gaccgtccgcatcgaggctagaacaactgcacaagcaagagagacgtcacactcttacccaaaaccttaa 4390171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1536 - 1597
Target Start/End: Complemental strand, 19504842 - 19504781
Alignment:
Q  1536 catcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||    
T  19504842 catcgaggctagaacaaccacacaagcaagatagacgccacactcttacccaaaactttaag 19504781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 20825994 - 20825921
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| ||||||||| |||||||||||||| || ||| |||||| ||||||||||||||||||||||||||||    
T  20825994 ggggactgtccacatcaaggctagaacaaccgcataaggaagagaaacaccacactcttacccaaaaccttaag 20825921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1500 - 1597
Target Start/End: Original strand, 22027936 - 22028032
Alignment:
Q  1500 tgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||| | ||| ||||||  ||||| |||||||||||| ||| |||||||||| |||| |||||||||||||| |||||||||||||||||||    
T  22027936 tgttgggtca-tgaggggagcctgagggactgtccacatcgagactaaaacaaccacataagcgagagagacaccacattcttacccaaaaccttaag 22028032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 22183262 - 22183335
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||||||||  |||||  |||||||| ||||||||||| |||||||||||||    
T  22183262 ggggaccgtccacatcgaggctagaacaaccgtacaagtgagagagacgccacactcttatccaaaaccttaag 22183335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 36572177 - 36572104
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||| |||||||||||| |||||||| ||||||| |||||||||||| ||||| |||||||||||||||    
T  36572177 ggggaccgttcacatcgaggcttgaacaaccgcacaagcgagagagacaccatactctaacccaaaaccttaag 36572104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1524 - 1589
Target Start/End: Complemental strand, 43827597 - 43827532
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaa 1589  Q
    |||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||    
T  43827597 ggggaccgtccacatcgaggttagaacaaccgcacaagtaagagagacaccacactcttatccaaa 43827532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1534 - 1591
Target Start/End: Complemental strand, 54109060 - 54109003
Alignment:
Q  1534 cacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaac 1591  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  54109060 cacatcgaagctagaacaaccgcacaagcaagagagacaccacactcttacccaaaac 54109003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 54936353 - 54936281
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| ||||||||||||||||||||||||||| | |  ||||||||||||||||||||||||||||||||||    
T  54936353 ggggactgtccacatcgaggctagaacaaccacata-gtgagagagacaccacactcttacccaaaaccttaag 54936281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 1534 - 1597
Target Start/End: Complemental strand, 52884844 - 52884780
Alignment:
Q  1534 cacatcgaggctagaacaaccacacaagcaagagagacaccacactctta-cccaaaaccttaag 1597  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  52884844 cacatcgaggctagatcaaccgcacaagcaagagagacaccacactcttaccccaaaaccttaag 52884780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1523 - 1597
Target Start/End: Complemental strand, 49303065 - 49302991
Alignment:
Q  1523 aggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| |||||||||||||| |||||||| | || ||| |||||| ||||||||||||||||||||||||||||    
T  49303065 aggggatcgtccacatcgaggatagaacaatcgcataagtaagagatacaccacactcttacccaaaaccttaag 49302991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1517 - 1597
Target Start/End: Original strand, 16888807 - 16888887
Alignment:
Q  1517 gagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||| |||||||||||| |||||||  ||||||||| | ||||| ||||||||||| ||||||||||||||||||| ||||    
T  16888807 gagcttaggggaccgtctacatcgaaactagaacaatcgcacaaacaagagagacatcacactcttacccaaaaccgtaag 16888887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1524 - 1596
Target Start/End: Original strand, 45489712 - 45489784
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    ||||| || |||||||||| ||||||||||||  ||||| |||||||||||||||| ||||||||||||||||    
T  45489712 ggggatcggccacatcgagactagaacaaccatgcaagcgagagagacaccacactattacccaaaaccttaa 45489784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1553 - 1597
Target Start/End: Complemental strand, 45496934 - 45496890
Alignment:
Q  1553 ccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  45496934 ccacacaagcaagagagacaccacactcttacccaaaaccttaag 45496890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 1525 - 1596
Target Start/End: Original strand, 45489331 - 45489402
Alignment:
Q  1525 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    |||||| ||||||||||||||||||||| ||||| ||||| ||||||| |||||||||||| |||| |||||    
T  45489331 gggaccatccacatcgaggctagaacaatcacactagcaaaagagacatcacactcttaccaaaaatcttaa 45489402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1530 - 1597
Target Start/End: Complemental strand, 31691306 - 31691237
Alignment:
Q  1530 cgtccacatcgaggctagaacaaccacacaagcaagag--agacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||| |  |||||||||||  |||| |||||||||||||||||||||||||    
T  31691306 cgtccacatcgaggctagaacaatcgtacaagcaagagatagacgccacactcttacccaaaaccttaag 31691237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1455 - 1500
Target Start/End: Original strand, 8997951 - 8997996
Alignment:
Q  1455 aaaatgagtaaacaaaacttaatgttgaagtaataatgactaaatt 1500  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  8997951 aaaatgagtaaccaaaacttaatgttgaagtaataatgactaaatt 8997996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1541 - 1597
Target Start/End: Original strand, 4955332 - 4955388
Alignment:
Q  1541 aggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||| ||||| |||||| ||||||||| |||||||||||||||||||||||||    
T  4955332 aggctagagcaaccgcacaagtaagagagacgccacactcttacccaaaaccttaag 4955388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1541 - 1597
Target Start/End: Original strand, 15841383 - 15841439
Alignment:
Q  1541 aggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||| ||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  15841383 aggctagagcaaccacacaagtgagagagacatcacactcttacccaaaaccttaag 15841439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1521 - 1597
Target Start/End: Complemental strand, 43174668 - 43174592
Alignment:
Q  1521 ctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| |||||||||||| |||||| |||||||| | || |||||||||| |||||||||||||||| || |||||    
T  43174668 ctagggaaccgtccacatcaaggctacaacaaccatataaacaagagagacgccacactcttacccaacactttaag 43174592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 3271947 - 3271872
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaa-gagagacac-cacactcttacccaaaaccttaag 1597  Q
    |||||| ||||||||||||||||||||||||||| ||  || |||||| || ||||||||||||||||||||||||    
T  3271947 ggggactgtccacatcgaggctagaacaaccacataataaacgagagagacacacactcttacccaaaaccttaag 3271872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1527 - 1597
Target Start/End: Complemental strand, 3700512 - 3700442
Alignment:
Q  1527 gaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||| ||| ||||||||||   ||||||||| || ||||||| |||||||||||||    
T  3700512 gaccgtccacatcgaggcttgaataaccacacaaatgagagagacatcatactcttatccaaaaccttaag 3700442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 8900473 - 8900375
Alignment:
Q  18 aatcttctctattcttttgattggaaattgccacaaggtttggaaaaggaagatattgataccgaaatgttgccagggatcactcagcacaagaagaat 116  Q
    |||||||| || || ||||||||| |||| ||| | ||| ||| |||||||||||||||||| |||| || ||||||  ||||||| ||||||||||||    
T  8900473 aatcttctatactcctttgattgggaattaccagatggtatggtaaaggaagatattgatactgaaaggtggccaggactcactcaacacaagaagaat 8900375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1527 - 1597
Target Start/End: Original strand, 34004586 - 34004656
Alignment:
Q  1527 gaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| ||||||||||||||||||||| ||||||  ||||||||  |||||||||| | |||||||||||    
T  34004586 gaccgttcacatcgaggctagaacaaccgcacaagggagagagacggcacactcttatcgaaaaccttaag 34004656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1526 - 1596
Target Start/End: Original strand, 39698944 - 39699014
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    |||| |||||||||||| |||||| |||| |||||||||||||||  | |||||||||| |||||||||||    
T  39698944 ggactgtccacatcgagactagaataaccgcacaagcaagagagatgctacactcttactcaaaaccttaa 39699014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1529 - 1590
Target Start/End: Complemental strand, 20826370 - 20826309
Alignment:
Q  1529 ccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaa 1590  Q
    |||||||||||||||||||||||| | || ||| |||||||||| |||||||||||| ||||    
T  20826370 ccgtccacatcgaggctagaacaatcgcataaggaagagagacatcacactcttacctaaaa 20826309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1528 - 1569
Target Start/End: Original strand, 23817457 - 23817498
Alignment:
Q  1528 accgtccacatcgaggctagaacaaccacacaagcaagagag 1569  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  23817457 accgtccacatcgaggctagaacaaccacactagcaagagag 23817498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1528 - 1597
Target Start/End: Complemental strand, 41370812 - 41370743
Alignment:
Q  1528 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||| |||||||||||| |||| |||||||||| |||| | ||||| |||| ||||||    
T  41370812 accgtccacatcgaggttagaacaaccactcaagtaagagagacatcacatttttacctaaaatcttaag 41370743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1545 - 1597
Target Start/End: Complemental strand, 40067181 - 40067129
Alignment:
Q  1545 tagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||| |||||||||||||| |||||| |||||||||| ||||||    
T  40067181 tagaacaaccacataagcaagagagacatcacacttttacccaaaatcttaag 40067129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1359 - 1402
Target Start/End: Original strand, 8996718 - 8996761
Alignment:
Q  1359 attcaacaaaagccacaccattagggtgctcactgtacgtgtat 1402  Q
    |||||||||||||||||||||||||||||||| || ||||||||    
T  8996718 attcaacaaaagccacaccattagggtgctcattgaacgtgtat 8996761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1533 - 1572
Target Start/End: Complemental strand, 19895445 - 19895406
Alignment:
Q  1533 ccacatcgaggctagaacaaccacacaagcaagagagaca 1572  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  19895445 ccacatcgaggctagaacaaccgcacaagcaagagagaca 19895406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 2740856 - 2740785
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| |||| |||||||||||||||||  ||||||  |||||||| ||||||||||||  |||||||||||    
T  2740856 ggggaccatccatatcgaggctagaacaac--cacaagtgagagagacgccacactcttacgtaaaaccttaag 2740785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1523 - 1597
Target Start/End: Original strand, 3244448 - 3244522
Alignment:
Q  1523 aggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| | ||||||||||||| ||||||||| |||||  ||||||||  |||| ||||||||||||| |||||    
T  3244448 aggggactgcccacatcgaggctggaacaaccatacaagtgagagagacgacacattcttacccaaaactttaag 3244522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 8914378 - 8914280
Alignment:
Q  18 aatcttctctattcttttgattggaaattgccacaaggtttggaaaaggaagatattgataccgaaatgttgccagggatcactcagcacaagaagaat 116  Q
    |||||||| ||||| ||||||||| |||| ||| | ||  ||  |||||||||||||||||| |||| || ||||||  ||||||| ||||||||||||    
T  8914378 aatcttctatattcctttgattgggaattaccagatggcctgataaaggaagatattgatactgaaaggtggccaggactcactcaacacaagaagaat 8914280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1527 - 1597
Target Start/End: Original strand, 51768061 - 51768131
Alignment:
Q  1527 gaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||| |||||||| | || ||| |||||||||| |  ||| |||||||||||||||||    
T  51768061 gaccgtccacatcgaggttagaacaatcccataagtaagagagacatcgtacttttacccaaaaccttaag 51768131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 48111696 - 48111769
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||| |||| ||||| |||||||   |  ||||||||||||||||| |||| |||||||||||    
T  48111696 ggggaccgtccacattgaggttagaaaaaccacatttgtgagagagacaccacactcatacctaaaaccttaag 48111769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1544 - 1597
Target Start/End: Complemental strand, 49880297 - 49880245
Alignment:
Q  1544 ctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||| ||| || ||||||||||||||| ||||||||||||||||||||    
T  49880297 ctagaacaac-acataaacaagagagacaccacgctcttacccaaaaccttaag 49880245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1524 - 1596
Target Start/End: Complemental strand, 3341286 - 3341214
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    |||||||||| ||||||||| || || ||||||| ||  |||| ||||| ||||||||||||||||| |||||    
T  3341286 ggggaccgtctacatcgaggttaaaataaccacataattaagaaagacatcacactcttacccaaaatcttaa 3341214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1524 - 1568
Target Start/End: Original strand, 11702297 - 11702341
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagaga 1568  Q
    |||||| || ||||||||||||||||||||| |||||||||||||    
T  11702297 ggggactgttcacatcgaggctagaacaaccgcacaagcaagaga 11702341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1534 - 1597
Target Start/End: Complemental strand, 52885038 - 52884972
Alignment:
Q  1534 cacatcgaggctagaacaaccacacaagca--agagagacaccacactctta-cccaaaaccttaag 1597  Q
    ||||||||||||||| |||||||||||  |  |||||||||||||| ||||| ||||||||||||||    
T  52885038 cacatcgaggctagatcaaccacacaaataagagagagacaccacattcttaccccaaaaccttaag 52884972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1559 - 1597
Target Start/End: Original strand, 6975489 - 6975527
Alignment:
Q  1559 aagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  6975489 aagcaagagagacgccacactcttacccaaaatcttaag 6975527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1104 - 1161
Target Start/End: Complemental strand, 5882607 - 5882550
Alignment:
Q  1104 acagggactaaaaccaaagcaaggcatatttacaggataagaaccatattttaaccta 1161  Q
    |||||||||||||||||| | |||||||||| |||||  | |||||||||||| ||||    
T  5882607 acagggactaaaaccaaaacgaggcatatttgcaggactaaaaccatattttagccta 5882550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1564 - 1597
Target Start/End: Complemental strand, 11197344 - 11197311
Alignment:
Q  1564 agagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||| ||||    
T  11197344 agagagacaccacactcttacccaaaaccctaag 11197311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1534 - 1571
Target Start/End: Complemental strand, 19895570 - 19895533
Alignment:
Q  1534 cacatcgaggctagaacaaccacacaagcaagagagac 1571  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  19895570 cacatcgaagctagaacaaccacacaagcaagatagac 19895533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 2e-34; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 1498 - 1597
Target Start/End: Original strand, 37990613 - 37990712
Alignment:
Q  1498 attgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||| | ||||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37990613 attgttgggtcattgaggagagctcgggggaccgtccacatcgaggctagaacaatcacacaagcaagagagacaccacactcttacccaaaaccttaag 37990712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 8e-31
Query Start/End: Original strand, 1500 - 1597
Target Start/End: Original strand, 37990953 - 37991050
Alignment:
Q  1500 tgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||  | || ||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37990953 tgttgggtcatgagggggagcctgagggaccgtccacatcgaggctagaacaaccacataagcaagagagacaccacactcttacccaaaaccttaag 37991050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 8e-31
Query Start/End: Original strand, 1500 - 1597
Target Start/End: Original strand, 42342364 - 42342461
Alignment:
Q  1500 tgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||| |||||  ||||||||||||||| ||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||    
T  42342364 tgttgggtcactaaggggagccagggggaccgtccacattgaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaaccttaag 42342461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 54018198 - 54018271
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  54018198 ggggaccgcccacatcgaggctagaacaaccacacaagcatgagagacaccacactcttacccaaaaccttaag 54018271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 1526 - 1597
Target Start/End: Original strand, 42342092 - 42342163
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  42342092 ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaag 42342163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 1526 - 1597
Target Start/End: Original strand, 43346793 - 43346864
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43346793 ggaccgtccacatagaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaag 43346864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 1526 - 1596
Target Start/End: Complemental strand, 15773010 - 15772940
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15773010 ggaccgtccacatcgaggttagaacaaccacacaagcaagagagacaccacactcttatccaaaaccttaa 15772940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 22304727 - 22304654
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22304727 ggggactgtccacatcgagactagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaag 22304654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 32589861 - 32589788
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  32589861 ggggaccgtccacatcgagcctagaacaaccacacaagcaagagagacatcgcactcttacccaaaaccttaag 32589788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 54017816 - 54017889
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  54017816 ggggaccgcccacatcgaagctagaacaaccacacaagtaagagagacaccacactcttacccaaaaccttaag 54017889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1523 - 1597
Target Start/End: Complemental strand, 31190168 - 31190094
Alignment:
Q  1523 aggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| |||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  31190168 aggggagcgtccaaatcgaggctagaacaacccgacaagcaagagagacaccacactcttacccaaaaccttaag 31190094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1527 - 1597
Target Start/End: Original strand, 32462903 - 32462973
Alignment:
Q  1527 gaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  32462903 gaccgtacacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttactcaaaaccttaag 32462973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 3135454 - 3135527
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| | |||||||||||    
T  3135454 ggggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttatctaaaaccttaag 3135527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 12114562 - 12114635
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||| |||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  12114562 ggggaccgaccacatcgtggctagaacaaccgcacaagtaagagagacaccacactcttacccaaaaccttaag 12114635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1532 - 1597
Target Start/End: Original strand, 22303963 - 22304028
Alignment:
Q  1532 tccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  22303963 tccacatcgaggctagaacaaccactcaagcaagagagacaccacactcttatccaaaaccttaag 22304028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 29644902 - 29644975
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||||| |||||||||||||||||||||||||    
T  29644902 ggggaccgtccacatcgaggctaaaacaaccgcataagcaagagagacgccacactcttacccaaaaccttaag 29644975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 35946680 - 35946607
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||||||    
T  35946680 ggggaccgtccacatcgaggctagaacaattgcacaagcaagagagacaccacacttttacccaaaaccttaag 35946607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 41359491 - 41359564
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||| ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  41359491 ggggaccgtccacattgaggctagaacaaccgcacaagcaaaagagacgccacactcttacccaaaaccttaag 41359564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 41359765 - 41359838
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||    
T  41359765 ggggaccgcccacatcgaggctagaacaaccacacaagcgagagagacgccacattcttacccaaaaccttaag 41359838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1532 - 1597
Target Start/End: Original strand, 39934963 - 39935028
Alignment:
Q  1532 tccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||    
T  39934963 tccacatcgaggctagaacaaccacacaagcaagagagacatcacactcttactcaaaactttaag 39935028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 50612447 - 50612520
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||| |||||| | |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  50612447 ggggaccgtccacgtcgaggatggaacaaccactcaagcaagagagacatcacactcttacccaaaaccttaag 50612520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 53577522 - 53577449
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  53577522 ggggaccatccacaccgaggctagaacaaccacacttgcaagagagacaccacactcttacccaagaccttaag 53577449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1524 - 1596
Target Start/End: Original strand, 33803252 - 33803324
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||| |||||||||||||||| |||||||    
T  33803252 ggggaccgtccacatcgaggctagaacaaccacacaagagagggagacgccacactcttacccaataccttaa 33803324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1499 - 1597
Target Start/End: Original strand, 22303633 - 22303732
Alignment:
Q  1499 ttgttgggtcactaaggagagcctaggg-gaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| |||| | ||||||  |||||| ||||||| |||||||||||||||||| | |||||| |||||| ||||||||||||||||||||||||||||    
T  22303633 ttgttgagtcagtgaggagaagctagggagaccgtctacatcgaggctagaacaatcgcacaagtaagagaaacaccacactcttacccaaaaccttaag 22303732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 21832345 - 21832416
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||| |  ||||||||||||||||||||||    
T  21832345 ggggactgtccacatcgaggctagaacaaccagacaagcaagagagacgc--cactcttacccaaaaccttaag 21832416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1524 - 1593
Target Start/End: Original strand, 25739425 - 25739494
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacct 1593  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||||  ||||||||||||||||||||    
T  25739425 ggggaccgtccacatcgaggctagaactaccgcacaagctagagagacgtcacactcttacccaaaacct 25739494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 29644581 - 29644654
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| |||||||||| |||| ||||||| || ||||||||||||| |||||||||||||||||||||||||    
T  29644581 ggggaccatccacatcgaagctaaaacaaccgcataagcaagagagacgccacactcttacccaaaaccttaag 29644654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1524 - 1587
Target Start/End: Complemental strand, 25755552 - 25755489
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttaccca 1587  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||    
T  25755552 ggggaccatccacatcgaggctagaacaaccgcacaagcaagagagacgccacacttttaccca 25755489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1530 - 1597
Target Start/End: Complemental strand, 15773346 - 15773277
Alignment:
Q  1530 cgtccacatcgaggctagaacaaccacacaagcaag--agagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||| |||||||||||||||||||||  ||||||| |||||||||||||||||| |||||    
T  15773346 cgtccacatcgaggttagaacaaccacacaagcaagcaagagacatcacactcttacccaaaactttaag 15773277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1527 - 1597
Target Start/End: Original strand, 45395656 - 45395726
Alignment:
Q  1527 gaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||| ||||||||||||||||| ||||| ||||||  |||||||||||||||||||||||||||| |||||    
T  45395656 gaccctccacatcgaggctagagcaaccccacaagtgagagagacaccacactcttacccaaaacattaag 45395726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1525 - 1578
Target Start/End: Complemental strand, 8328427 - 8328374
Alignment:
Q  1525 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacac 1578  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  8328427 gggaccgtccacatcgaggctaaaacaaccccacaagcaagagagacaccacac 8328374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1524 - 1573
Target Start/End: Complemental strand, 22304351 - 22304302
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacac 1573  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22304351 ggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacac 22304302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 52634833 - 52634760
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| ||| ||||| |||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||    
T  52634833 ggggacagtctacatcaaggctagaacaactgcacaagcaagagagacgtcacactcttacccaaaaccttaag 52634760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 54017548 - 54017621
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||| |||||||||||| | ||||| |||| ||| || ||||||||||||||||||||||||||||||||    
T  54017548 ggggaccgaccacatcgaggccaaaacaatcacataagtaatagagacaccacactcttacccaaaaccttaag 54017621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1499 - 1597
Target Start/End: Original strand, 1634290 - 1634387
Alignment:
Q  1499 ttgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| |||||| ||| ||||   |||||||||||||||||||||||||||||||| |  ||  ||||||| ||| ||||||||||||||||||||||    
T  1634290 ttgttgtgtcactgaggggagctagggggaccgtccacatcgaggctagaacaaccata-tagtgagagagataccgcactcttacccaaaaccttaag 1634387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1523 - 1597
Target Start/End: Complemental strand, 45901873 - 45901799
Alignment:
Q  1523 aggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||| | ||||||||||  | ||| ||||||||||||||||||||||| ||||| |||||    
T  45901873 aggggaccgtccacatcgaagttagaacaaccctataagtaagagagacaccacactcttaccaaaaactttaag 45901799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1499 - 1597
Target Start/End: Original strand, 43978840 - 43978942
Alignment:
Q  1499 ttgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacact----cttacccaaaacctt 1594  Q
    ||||||||||||||| | ||||   |||||| ||||||||||||| |||||||| ||||||||  |||||||| |||||||    |||||||||||||||    
T  43978840 ttgttgggtcactaaagggagctcgggggacagtccacatcgaggttagaacaaacacacaagtgagagagacgccacactctagcttacccaaaacctt 43978939  T
Q  1595 aag 1597  Q
    |||    
T  43978940 aag 43978942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 53117975 - 53118048
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||| |||||||| ||||||||||||||||  |  |||||||||| |||||||||||||||| ||||||    
T  53117975 ggggaccgttcacatcgatgctagaacaaccacacttgtgagagagacactacactcttacccaaaatcttaag 53118048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1524 - 1596
Target Start/End: Original strand, 32462558 - 32462630
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    |||| ||||| |||||||||||| ||||| | ||||| |||||||||| ||||||||||| ||||||||||||    
T  32462558 gggggccgtctacatcgaggctaaaacaatcccacaaacaagagagaccccacactcttatccaaaaccttaa 32462630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1533 - 1597
Target Start/End: Complemental strand, 39389219 - 39389155
Alignment:
Q  1533 ccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| ||||||||||||   |||| |||| ||||||||||||||||||||||||||||||||    
T  39389219 ccacatcaaggctagaacaattgcacaggcaaaagagacaccacactcttacccaaaaccttaag 39389155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1554 - 1597
Target Start/End: Original strand, 39336000 - 39336043
Alignment:
Q  1554 cacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  39336000 cacacaagcgagagagacaccacactcttacccaaaaccttaag 39336043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1550 - 1595
Target Start/End: Original strand, 3135099 - 3135144
Alignment:
Q  1550 caaccacacaagcaagagagacaccacactcttacccaaaacctta 1595  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  3135099 caaccgcacaagcaagagagacaccacactcttactcaaaacctta 3135144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1523 - 1597
Target Start/End: Complemental strand, 8328067 - 8327989
Alignment:
Q  1523 aggggaccgtccacatcgaggctagaacaac----cacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| ||||||||||||||||||||||||    | |||  |  ||||||||||||||||||||||||||||||||||    
T  8328067 aggggagcgtccacatcgaggctagaacaactgcactcacttgtgagagagacaccacactcttacccaaaaccttaag 8327989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1525 - 1590
Target Start/End: Complemental strand, 11662108 - 11662044
Alignment:
Q  1525 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaa 1590  Q
    ||||| || |||||||||||||||||||||||||||   ||||||||||| |||||||||||||||    
T  11662108 gggactgttcacatcgaggctagaacaaccacacaa-tgagagagacacctcactcttacccaaaa 11662044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1524 - 1593
Target Start/End: Complemental strand, 37726654 - 37726585
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacct 1593  Q
    |||||||||||||||||||||||||||||| | ||||| |||| | ||  |||||||||| |||||||||    
T  37726654 ggggaccgtccacatcgaggctagaacaactatacaagtaagataaacgtcacactcttatccaaaacct 37726585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1522 - 1590
Target Start/End: Complemental strand, 39914412 - 39914344
Alignment:
Q  1522 taggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaa 1590  Q
    |||||| | ||| |||||||||||||||||||| || |||  |||||||||||||||||||| ||||||    
T  39914412 tagggggctgtctacatcgaggctagaacaaccgcataagtgagagagacaccacactcttatccaaaa 39914344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1550 - 1597
Target Start/End: Original strand, 47964544 - 47964591
Alignment:
Q  1550 caaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||  |||||||| |||||||||||||||||||||||||    
T  47964544 caaccacacaagtgagagagacgccacactcttacccaaaaccttaag 47964591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 7766783 - 7766854
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| || ||||||||||||||||||||| |||||   ||||||| ||||| ||||||| |||||||||||    
T  7766783 ggggaccatctacatcgaggctagaacaaccatacaag--tgagagacgccacaatcttacctaaaaccttaag 7766854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 44160547 - 44160617
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||||||   | |||| ||||||||| ||||| ||||| |||||||||||||    
T  44160547 ggggaccgtccacatcgaggctagaacaa--tcgcaagtaagagagacgccacattctta-ccaaaaccttaag 44160617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1564 - 1597
Target Start/End: Complemental strand, 11661638 - 11661605
Alignment:
Q  1564 agagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||||||    
T  11661638 agagagacaccacactcttacccaaaaccttaag 11661605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 47964915 - 47964988
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||| |||||||||| |||| ||||||| || | |||  |||||||| |||||||||||||||||| ||||||    
T  47964915 ggggaacgtccacatctaggccagaacaatcatataagtgagagagacgccacactcttacccaaaatcttaag 47964988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1564 - 1597
Target Start/End: Complemental strand, 53596078 - 53596045
Alignment:
Q  1564 agagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||||||    
T  53596078 agagagacaccacactcttacccaaaaccttaag 53596045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1564 - 1597
Target Start/End: Complemental strand, 53596393 - 53596360
Alignment:
Q  1564 agagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||||||    
T  53596393 agagagacaccacactcttacccaaaaccttaag 53596360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1541 - 1597
Target Start/End: Complemental strand, 4823796 - 4823740
Alignment:
Q  1541 aggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||| || || |||||| | ||||||||||||||||||||||| ||||||    
T  4823796 aggctagaacatccgcataagcaaaaaagacaccacactcttacccaaaatcttaag 4823740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 33175659 - 33175734
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagac--accacactcttacccaaaaccttaag 1597  Q
    |||||| | ||||| |||||||||||||| ||||||||  ||||||||    ||||||||||||||||||||||||    
T  33175659 ggggactgcccacaccgaggctagaacaatcacacaagtgagagagacgtcacacactcttacccaaaaccttaag 33175734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1532 - 1597
Target Start/End: Original strand, 49336694 - 49336760
Alignment:
Q  1532 tccacatcgaggctagaacaaccacacaagcaa-gagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| |||| |||||||||| |||||  || ||||||||||||||||||||||| ||| |||||    
T  49336694 tccacattgaggatagaacaaccgcacaaaaaaagagagacaccacactcttacccagaactttaag 49336760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 3e-33; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 1500 - 1597
Target Start/End: Complemental strand, 6500632 - 6500535
Alignment:
Q  1500 tgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||| | | ||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6500632 tgttgggtaagtgaggggagcctgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaag 6500535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 1498 - 1593
Target Start/End: Original strand, 40296290 - 40296384
Alignment:
Q  1498 attgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacct 1593  Q
    ||||||||||||  | |||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40296290 attgttgggtcatgagggag-gcctgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaacct 40296384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 15370257 - 15370184
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  15370257 ggggaccgtccacatcgaggctagaacaatcccacaagcaagagagacaccacactcttacccaaaaccttaag 15370184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1500 - 1597
Target Start/End: Complemental strand, 25328117 - 25328020
Alignment:
Q  1500 tgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||| ||| ||||   ||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  25328117 tgttgggtcactgaggggagctcgggggaccgtccacattgaggctagaacaaccacacttgcaagagagacaccacactcttacccaaaaccttaag 25328020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 8e-28
Query Start/End: Original strand, 1525 - 1593
Target Start/End: Original strand, 36492218 - 36492286
Alignment:
Q  1525 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacct 1593  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36492218 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttatccaaaacct 36492286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 3295345 - 3295417
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  3295345 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaacacactctta-ccaaaaccttaag 3295417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1528 - 1597
Target Start/End: Original strand, 34753029 - 34753098
Alignment:
Q  1528 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  34753029 accgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaag 34753098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 1517 - 1597
Target Start/End: Complemental strand, 6500987 - 6500907
Alignment:
Q  1517 gagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||| |||||||||||||    
T  6500987 gagcctgggggaccgtccacatcgaggctagaataaccgcacaagtaagagagacaccacactcttatccaaaaccttaag 6500907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 1524 - 1596
Target Start/End: Original strand, 26900017 - 26900089
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    |||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  26900017 ggggaccgtccacatcaaggctagaacaaacccacaagcaagagagacaccacactcttacccaaaaccttaa 26900089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 7e-25
Query Start/End: Original strand, 1499 - 1597
Target Start/End: Original strand, 42405573 - 42405669
Alignment:
Q  1499 ttgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||  || ||||   ||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  42405573 ttgttgggtcactggggggagctcgggggaccgtccacatcgaggctagaacaaccgcacaagca--agagacaccacactcttacccaaaaccttaag 42405669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1502 - 1596
Target Start/End: Complemental strand, 41632961 - 41632868
Alignment:
Q  1502 ttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    |||||||| ||||| |||| | ||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  41632961 ttgggtcattaaggggagc-tgggggaccgtccacatcgagactaaaacaaccgcacaagcaagagagacaccacactcttacccaaaatcttaa 41632868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1500 - 1593
Target Start/End: Complemental strand, 624378 - 624285
Alignment:
Q  1500 tgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacct 1593  Q
    ||||||||||||| || ||||   ||| ||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  624378 tgttgggtcactagggggagctcggggaaccgtccacatcgaggctagaacaaccccacaagtgagagagacaccacactcttacccaaaacct 624285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1500 - 1597
Target Start/End: Original strand, 1028493 - 1028590
Alignment:
Q  1500 tgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||| ||| ||||   ||||||||||||||||||||||||||||||| ||||||  |||||||| ||||||||||||| |||||||||||    
T  1028493 tgttgggtcactgaggggagctagggggaccgtccacatcgaggctagaacaaccgcacaagtgagagagacgccacactcttaccaaaaaccttaag 1028590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1528 - 1597
Target Start/End: Original strand, 18603124 - 18603193
Alignment:
Q  1528 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||    
T  18603124 accgtccacatcgaggctagaactaccacacaagcaagagagatgccacactcttacccaaaaccttaag 18603193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 27502036 - 27502109
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| ||||||    
T  27502036 ggggaccgtccacatcgaggatagaacaaccacacaagcaagagagacaccacacttttaccaaaaatcttaag 27502109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 41170792 - 41170719
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  41170792 ggggaccgtctacaccgaggctagaacaaccacacaagcaagaaaaacaccacactcttacccaaaaccttaag 41170719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1526 - 1597
Target Start/End: Complemental strand, 15370558 - 15370487
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||| ||||||||||||    
T  15370558 ggaccgtccacatcgaggctagaacaaccccacaaacaagagagacgccacactcttacgcaaaaccttaag 15370487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1524 - 1593
Target Start/End: Original strand, 3295015 - 3295084
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacct 1593  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  3295015 ggggactgtccacatcgaggctacaacaaccacacaaccaagagagacaccacactcatacccaaaacct 3295084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 32487551 - 32487478
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| |||||||||||||||||||||||||| |||||||||| ||  ||||||||||||||||||||||||    
T  32487551 ggggaccatccacatcgaggctagaacaaccacataagcaagagatacgtcacactcttacccaaaaccttaag 32487478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1538 - 1597
Target Start/End: Original strand, 13415774 - 13415833
Alignment:
Q  1538 tcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  13415774 tcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaag 13415833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 623976 - 623903
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||| |||| ||||||||||||||| ||||||  ||||||||||||||||||||| ||||||||||||    
T  623976 ggggaccgtctacattgaggctagaacaaccccacaagtgagagagacaccacactcttactcaaaaccttaag 623903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 12662652 - 12662725
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||| ||||||||||||||||| |||| ||||||||||| || |||||||||||||||||||| ||||||    
T  12662652 ggggaccgaccacatcgaggctagaagaaccccacaagcaagaaaggcaccacactcttacccaaaaacttaag 12662725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 1498 - 1597
Target Start/End: Original strand, 36568543 - 36568640
Alignment:
Q  1498 attgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||| | ||| ||||   ||||||| |||||||||||| |||||||||||||||||  |||||||| ||||||||||||| |||||||||||    
T  36568543 attgttgggtcattgaggggagctcgggggaccttccacatcgaggatagaacaaccacacaag--agagagacgccacactcttaccaaaaaccttaag 36568640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1524 - 1595
Target Start/End: Complemental strand, 38427377 - 38427306
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacctta 1595  Q
    |||||||| | ||||||||| |||||||||| |||||||||||||||| |||||||||||||||||| ||||    
T  38427377 ggggaccgccaacatcgaggttagaacaaccgcacaagcaagagagacgccacactcttacccaaaatctta 38427306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1523 - 1597
Target Start/End: Complemental strand, 35150165 - 35150091
Alignment:
Q  1523 aggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| |||||||| |||| |||||||||||||| ||  |||||||||||||||| |||||||||||||||||    
T  35150165 aggggacggtccacattgaggttagaacaaccacactagtgagagagacaccacacttttacccaaaaccttaag 35150091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 299647 - 299574
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| ||||||||||| ||||||||||||  |||||||| |||||| |||||||||||| ||||||||||||    
T  299647 ggggactgtccacatcgatgctagaacaaccgtacaagcaatagagacgccacactcttacacaaaaccttaag 299574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 11416977 - 11417050
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| |||||||||| |||||||||| | ||||||||||||||| | ||||||||||| ||||||||||||    
T  11416977 ggggaccatccacatcgaagctagaacaatcccacaagcaagagagagatcacactcttacacaaaaccttaag 11417050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1528 - 1597
Target Start/End: Complemental strand, 33747925 - 33747856
Alignment:
Q  1528 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||| |||||||||||||| || ||| ||||||||||||||||||||| |||||| ||||||    
T  33747925 accgtccacatcaaggctagaacaaccgcataaggaagagagacaccacactcttatccaaaatcttaag 33747856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1517 - 1597
Target Start/End: Complemental strand, 6224361 - 6224281
Alignment:
Q  1517 gagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| |||||||||||| || ||||||||| ||||| |||||||||  ||| ||||||||||||||| |||||||||||    
T  6224361 gagcctgggggaccgtccatattgaggctagaccaaccgcacaagcaactgaggcaccacactcttaccaaaaaccttaag 6224281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1533 - 1597
Target Start/End: Original strand, 26074155 - 26074219
Alignment:
Q  1533 ccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||| |||| ||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  26074155 ccacatcgaggttagagcaaccacactagtgagagagacaccacactcttacccaaaaccttaag 26074219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1533 - 1597
Target Start/End: Complemental strand, 26074761 - 26074697
Alignment:
Q  1533 ccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||| |||| ||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  26074761 ccacatcgaggttagagcaaccacactagtgagagagacaccacactcttacccaaaaccttaag 26074697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 1526 - 1597
Target Start/End: Complemental strand, 301107 - 301036
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| ||| ||||| || ||||| ||||||||||||||||||||||||||||||||| |||| ||||||    
T  301107 ggaccgttcacgtcgagacttgaacagccacacaagcaagagagacaccacactcttaccaaaaatcttaag 301036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 1546 - 1597
Target Start/End: Original strand, 795254 - 795305
Alignment:
Q  1546 agaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  795254 agaacaaccgcacaagcaagagagacaccacactcttacctaaaaccttaag 795305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1499 - 1597
Target Start/End: Original strand, 13785608 - 13785705
Alignment:
Q  1499 ttgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||  |||||||| | ||||||||||||||||||| | ||||||||||| |||| | ||||| |||||||||| ||||  |||||||||||    
T  13785608 ttgttgggtcatgaaggagagtc-aggggaccgtccacatcgaagttagaacaaccatacaaacgagagaaacaccacacttttacttaaaaccttaag 13785705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 20073932 - 20073834
Alignment:
Q  18 aatcttctctattcttttgattggaaattgccacaaggtttggaaaaggaagatattgataccgaaatgttgccagggatcactcagcacaagaagaat 116  Q
    |||||||| ||||| ||||||||| |||| ||| | ||| | | |||||||||||||||||| |||| |||||||||  ||||||||||||| ||||||    
T  20073932 aatcttctatattcctttgattgggaattaccagatggtctagtaaaggaagatattgatactgaaaggttgccaggactcactcagcacaaaaagaat 20073834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 9498655 - 9498727
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||| ||||||||| || | ||| || ||||||||||||||||||||||||||||| ||||||    
T  9498655 ggggaccgtccacattgaggctagaccagc-acataaacaagagagacaccacactcttacccaaaatcttaag 9498727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1532 - 1597
Target Start/End: Original strand, 26590918 - 26590983
Alignment:
Q  1532 tccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||| |||||||||||||| ||  |||||||| |||||||||||| ||||||||||||    
T  26590918 tccacatcgaggttagaacaaccacactagtgagagagacgccacactcttactcaaaaccttaag 26590983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1525 - 1597
Target Start/End: Original strand, 24489207 - 24489279
Alignment:
Q  1525 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| |||||||||| ||||||||||| |||||| || |||||| |||||||||||| ||||| ||||||    
T  24489207 gggaccgcccacatcgagactagaacaaccgcacaagtaaaagagacgccacactcttacgcaaaatcttaag 24489279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1531 - 1597
Target Start/End: Original strand, 26075168 - 26075235
Alignment:
Q  1531 gtccacatcgaggctagaacaaccacacaagcaagagagacaccacactc-ttacccaaaaccttaag 1597  Q
    |||||||||||||||| |||||||||||  |||||||||||  ||||||| |||||||||||||||||    
T  26075168 gtccacatcgaggctaaaacaaccacacttgcaagagagacgacacactctttacccaaaaccttaag 26075235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1547 - 1597
Target Start/End: Original strand, 29549278 - 29549328
Alignment:
Q  1547 gaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  29549278 gaacaaccacataagcaagagagacgccacactcttatccaaaaccttaag 29549328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1544 - 1597
Target Start/End: Original strand, 5723811 - 5723864
Alignment:
Q  1544 ctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||| |||||||||||||||||| | |||||| ||||||||||||||    
T  5723811 ctagaacaaccgcacaagcaagagagacactatactctttcccaaaaccttaag 5723864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1532 - 1597
Target Start/End: Complemental strand, 38427697 - 38427632
Alignment:
Q  1532 tccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||| |||||||||| ||||||  ||||||||  ||||||||||| ||||||||||||    
T  38427697 tccacatcgaggttagaacaaccgcacaagtgagagagacgtcacactcttacacaaaaccttaag 38427632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 9400164 - 9400060
Alignment:
Q  24 ctctattcttttgattggaaattgccacaaggtttggaaaaggaagatattgataccgaaatgttgccagggatcactcagcacaagaagaatcctcttt 123  Q
    |||||||| ||||||||| |||||||||| || ||||  ||||||||| |||||   |||| ||||||||||||  |||| ||||||||||| | |||||    
T  9400164 ctctattcctttgattgggaattgccacatgggttggttaaggaagatgttgattttgaaaggttgccagggattgctcaacacaagaagaaccatcttt 9400065  T
Q  124 acctt 128  Q
     ||||    
T  9400064 gcctt 9400060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1524 - 1591
Target Start/End: Original strand, 35167838 - 35167905
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaac 1591  Q
    |||||| ||||||||||| |||||||||||||||| ||   |||||||| |||||||||||| |||||    
T  35167838 ggggacagtccacatcgatgctagaacaaccacactagtgtgagagacatcacactcttaccaaaaac 35167905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 2411165 - 2411092
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||| ||||||| |||||||| ||  |||| || ||||| || |||||||||| ||||||||||||    
T  2411165 ggggaccgtccatatcgaggttagaacaatcattcaagtaatagagaaactacactcttactcaaaaccttaag 2411092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1062 - 1095
Target Start/End: Original strand, 22551218 - 22551251
Alignment:
Q  1062 aaacaaaatattttgcagggatctttttctacaa 1095  Q
    ||||||||||||||||||||||||||||||||||    
T  22551218 aaacaaaatattttgcagggatctttttctacaa 22551251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1564 - 1597
Target Start/End: Original strand, 36522277 - 36522310
Alignment:
Q  1564 agagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||||||    
T  36522277 agagagacaccacactcttacccaaaaccttaag 36522310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1528 - 1580
Target Start/End: Complemental strand, 24489635 - 24489583
Alignment:
Q  1528 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactc 1580  Q
    ||||| || ||||||| |||||||||  |||||||||||||||||||||||||    
T  24489635 accgttcatatcgaggttagaacaactgcacaagcaagagagacaccacactc 24489583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1526 - 1597
Target Start/End: Complemental strand, 42435583 - 42435512
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||| ||||||||||||||||     ||||||||| |||||||| |  ||||||||||||    
T  42435583 ggaccgtccacatcgatgctagaacaaccacacttatgagagagacatcacactctgattcaaaaccttaag 42435512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1548 - 1584
Target Start/End: Original strand, 795152 - 795189
Alignment:
Q  1548 aacaaccacacaa-gcaagagagacaccacactcttac 1584  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  795152 aacaaccacacaaagcaagagagacaccacactcttac 795189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1528 - 1592
Target Start/End: Complemental strand, 5660405 - 5660340
Alignment:
Q  1528 accgtccacatc-gaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacc 1592  Q
    |||||||||||  ||||||||||||||||||||| ||||| | |||||| ||| ||| ||||||||    
T  5660405 accgtccacatttgaggctagaacaaccacacaaacaagaaaaacaccatacttttatccaaaacc 5660340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1544 - 1589
Target Start/End: Original strand, 9498343 - 9498388
Alignment:
Q  1544 ctagaacaaccacacaagcaagagagacaccacactcttacccaaa 1589  Q
    |||||||||||||||  ||||||||||| |||||||||||| ||||    
T  9498343 ctagaacaaccacacttgcaagagagacgccacactcttactcaaa 9498388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1564 - 1597
Target Start/End: Complemental strand, 13042657 - 13042624
Alignment:
Q  1564 agagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||| |||||||||||||    
T  13042657 agagagacaccacactcttatccaaaaccttaag 13042624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1564 - 1597
Target Start/End: Complemental strand, 13042822 - 13042789
Alignment:
Q  1564 agagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||| |||||||||||||||||||    
T  13042822 agagagacaccacattcttacccaaaaccttaag 13042789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1564 - 1597
Target Start/End: Complemental strand, 13112820 - 13112787
Alignment:
Q  1564 agagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||| |||||||||||||||||||    
T  13112820 agagagacaccacattcttacccaaaaccttaag 13112787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1524 - 1577
Target Start/End: Complemental strand, 35150863 - 35150810
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccaca 1577  Q
    ||||||| ||||||||||||||| ||||| ||||| ||  ||||||||||||||    
T  35150863 ggggaccatccacatcgaggctaaaacaatcacactagtgagagagacaccaca 35150810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 8e-31; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 8e-31
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 5916025 - 5915952
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5916025 ggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaag 5915952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 3e-30
Query Start/End: Original strand, 1521 - 1597
Target Start/End: Complemental strand, 3670221 - 3670145
Alignment:
Q  1521 ctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3670221 ctagggaaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaag 3670145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 5e-29
Query Start/End: Original strand, 1500 - 1597
Target Start/End: Complemental strand, 34835056 - 34834961
Alignment:
Q  1500 tgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||| |||| ||  | |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34835056 tgttgggtcactagggagcgc--aagggatcatccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 34834961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 3669845 - 3669772
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3669845 ggggaccatccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaag 3669772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1500 - 1597
Target Start/End: Complemental strand, 30441266 - 30441170
Alignment:
Q  1500 tgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||| | || ||||| ||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30441266 tgttgggtcacgaggg-gagccaaggtgactgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaag 30441170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 40518229 - 40518156
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40518229 ggggaccgtccacatcaaggctagaacaaccacacaagcaagagagacgccacactcttacccaaaaccttaag 40518156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 1526 - 1597
Target Start/End: Original strand, 3038292 - 3038363
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  3038292 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagatgccacactcttacccaaaaccttaag 3038363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 6876862 - 6876935
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||    
T  6876862 ggggaccgtccacatcgaggctagaacaaccacacaaacaagagaaacaccacactcttacccaaaaccctaag 6876935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 8919144 - 8919217
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  8919144 ggggaccgtccacatcgaagctagaacaaccacacaagcaaaagagacaccacactcttatccaaaaccttaag 8919217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 1517 - 1597
Target Start/End: Complemental strand, 41129153 - 41129073
Alignment:
Q  1517 gagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  41129153 gagcctgggggaccgtccacatcgaggtttgaacaaccacacaagtaagagagacaccacactcatacccaaaaccttaag 41129073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1524 - 1590
Target Start/End: Original strand, 40579269 - 40579335
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaa 1590  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40579269 ggggacagtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaa 40579335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 6651652 - 6651579
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| |||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  6651652 ggggaccatccacatcgaggttagaacaatcgcacaagcaagagagacaccacactcttacccaaaaccttaag 6651579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1528 - 1597
Target Start/End: Original strand, 9483191 - 9483260
Alignment:
Q  1528 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  9483191 accgtccacatcgaggctagaacaaccgcacgagcaaaagagacaccacactcttacccaaaaccttaag 9483260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 34835367 - 34835294
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||    
T  34835367 ggggaccgtctacatcgaggctagaataaccacacaagcaagagtgacaccacactcttacccaaaactttaag 34835294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 34835633 - 34835560
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||    
T  34835633 ggggaccgtctacatcgaggctagaataaccacacaagcaagagtgacaccacactcttacccaaaactttaag 34835560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 34835899 - 34835826
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||    
T  34835899 ggggaccgtctacatcgaggctagaataaccacacaagcaagagtgacaccacactcttacccaaaactttaag 34835826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1500 - 1597
Target Start/End: Complemental strand, 40518763 - 40518667
Alignment:
Q  1500 tgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||| || ||||  || ||||||||||||| |||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  40518763 tgttgggtcactacgg-gagctcagaggaccgtccacattgaggctagaacaaccacacaagcaagagtgacgtcacactcttacccaaaaccttaag 40518667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 45122782 - 45122709
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  45122782 ggggaccttccacatcgaggcttgaacaaccacacaagcaagagagacgccacactcatacccaaaaccttaag 45122709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 1524 - 1596
Target Start/End: Original strand, 37544490 - 37544562
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    ||||| ||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||    
T  37544490 ggggatcgtccacatcgaggctagaacaaccgcacaagtaagaaagacaccacactcttacccaaaaccttaa 37544562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1534 - 1597
Target Start/End: Original strand, 45122067 - 45122130
Alignment:
Q  1534 cacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  45122067 cacatcgaggctagaacaaccccacaagtaagagagacaccacactcttacccaaaaccttaag 45122130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 7e-22
Query Start/End: Original strand, 1523 - 1597
Target Start/End: Complemental strand, 9608904 - 9608830
Alignment:
Q  1523 aggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||| |||||||||||||||||||||||||| ||| |||||||||||| |||||||| ||||||||||||||||    
T  9608904 agggggccgtccacatcgaggctagaacaacctcactagcaagagagacgccacactcatacccaaaaccttaag 9608830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1532 - 1597
Target Start/End: Original strand, 1014253 - 1014318
Alignment:
Q  1532 tccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||    
T  1014253 tccacatcgaggctagaacaaccgcacaagcaggagagacaccacactcttacccaaaactttaag 1014318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1525 - 1597
Target Start/End: Original strand, 33113368 - 33113440
Alignment:
Q  1525 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||| ||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  33113368 gggaccgtccgcattgagcctagaacaaccacactagcaagagagacaccacactcttacccaaaatcttaag 33113440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1522 - 1597
Target Start/End: Complemental strand, 6732055 - 6731980
Alignment:
Q  1522 taggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| | |||||||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||    
T  6732055 taggggatcatccacatcgaggttagaacaaccgcataagcaagagagacaccacactcttactcaaaaccttaag 6731980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1526 - 1597
Target Start/End: Original strand, 20870575 - 20870646
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  20870575 ggaccgtccatatcaaggttagaacaaccacacaagcaagagagacaccacactcttatccaaaatcttaag 20870646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1513 - 1597
Target Start/End: Original strand, 25561803 - 25561889
Alignment:
Q  1513 aggagagc-ctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactctta-cccaaaaccttaag 1597  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||   |||||||||| ||||||||||||||    
T  25561803 aggagagctctaggggaccttccacatcgaggctagagcaaccacacaagcaagagagatgtcacactcttaccccaaaaccttaag 25561889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 1513915 - 1513988
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||| |||| |||| | |||||||| |||||||| |||||||||||||||||    
T  1513915 ggggaccgtccacatcgaggctagaataaccccacatgtaagagagataccacacttttacccaaaaccttaag 1513988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 8918764 - 8918837
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||| || |||||||||||| |||||| ||||  ||||||||||||||||||||||||    
T  8918764 ggggaccgtccacatcgaggttaaaacaaccacacacgcaagaaagacgtcacactcttacccaaaaccttaag 8918837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1534 - 1597
Target Start/End: Complemental strand, 147968 - 147905
Alignment:
Q  1534 cacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||| ||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||    
T  147968 cacattgaggctagaacaactgcacaagtaagagagacaccacactcttacccaaaaccttaag 147905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1528 - 1583
Target Start/End: Original strand, 9482608 - 9482663
Alignment:
Q  1528 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactctta 1583  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  9482608 accgtccacatcgaggctagaacaaccgcacaagcaagagagataccacactctta 9482663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1534 - 1597
Target Start/End: Original strand, 32640542 - 32640605
Alignment:
Q  1534 cacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||| |||| ||||||||||||| | |||||||||||||||||||||||    
T  32640542 cacatcgaggctagaacaatcacaaaagcaagagagacgcaacactcttacccaaaaccttaag 32640605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1523 - 1597
Target Start/End: Complemental strand, 30359430 - 30359356
Alignment:
Q  1523 aggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||| ||| ||||||| ||||||| ||||||  |||||| |||||||||||||||||||||||||||||||||||    
T  30359430 agggaaccatccacattgaggctaaaacaacatcacaagaaagagagacaccacactcttacccaaaaccttaag 30359356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1530 - 1596
Target Start/End: Original strand, 40579512 - 40579578
Alignment:
Q  1530 cgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    |||||||||||||| ||||||||||  |||||||| |||||||||||||||||||| ||||||||||    
T  40579512 cgtccacatcgaggatagaacaaccgtacaagcaatagagacaccacactcttacctaaaaccttaa 40579578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1528 - 1597
Target Start/End: Complemental strand, 30359763 - 30359694
Alignment:
Q  1528 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||| | |||||||||| || ||| |||||||||||||||||||||||||||| ||||||    
T  30359763 accgtccacatcgaagttagaacaaccgcataagtaagagagacaccacactcttacccaaaatcttaag 30359694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1533 - 1597
Target Start/End: Complemental strand, 12284021 - 12283957
Alignment:
Q  1533 ccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| ||||||||||||||||||||||  |||||||||| ||||||||| |||||||||||||    
T  12284021 ccacatagaggctagaacaaccacacaagtgagagagacactacactcttatccaaaaccttaag 12283957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1528 - 1596
Target Start/End: Original strand, 18371998 - 18372066
Alignment:
Q  1528 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    ||||| ||||| ||||||||| ||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  18371998 accgttcacattgaggctagagcaaccgcacaagcgagagaaacaccacactcttacccaaaaccttaa 18372066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1524 - 1588
Target Start/End: Original strand, 43274635 - 43274699
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaa 1588  Q
    |||||||||||||||||||||| |||||||| || ||| |||||||||||||||||| |||||||    
T  43274635 ggggaccgtccacatcgaggctggaacaaccccataagtaagagagacaccacactcatacccaa 43274699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1517 - 1597
Target Start/End: Original strand, 45121903 - 45121983
Alignment:
Q  1517 gagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| ||||||| |||||||||||||| ||| |||||||| ||||| |||||| ||||||| |||||||||| ||||||    
T  45121903 gagcctgggggaccttccacatcgaggcttgaataaccacacgagcaaaagagacgccacactgttacccaaaatcttaag 45121983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 45123164 - 45123089
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccaca--ctcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||  |||||||||| |||||  |||||||||||||||  ||||||||||||||||||||    
T  45123164 ggggaccgtccacatcgagattagaacaaccccacaaataagagagacaccacactctcttacccaaaaccttaag 45123089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1527 - 1597
Target Start/End: Original strand, 70277 - 70347
Alignment:
Q  1527 gaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||| ||| |||| |||||||||||||||||||||| ||||  |||||||||||| |||||||||||    
T  70277 gaccgtccgcattgaggttagaacaaccacacaagcaagatagacgtcacactcttacctaaaaccttaag 70347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1531 - 1597
Target Start/End: Original strand, 45121663 - 45121729
Alignment:
Q  1531 gtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||| || ||| |||||||| | ||||||||||| ||||||||||||    
T  45121663 gtccacatcgaggctagaacaaccccataagtaagagagatatcacactcttactcaaaaccttaag 45121729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 147609 - 147536
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||  ||||||| | |||||||| ||| |||||||||||||||| ||||||||||||||||||| |||||    
T  147609 ggggaccacccacatcaatgctagaactaccgcacaagcaagagagacgccacactcttacccaaaactttaag 147536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 9309512 - 9309440
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||||||  |   ||||||||||||||||||||||| | ||||||||    
T  9309512 ggggaccgtccacatcgaggctagaacaaccaca-tactgagagagacaccacactcttacccgacaccttaag 9309440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1528 - 1597
Target Start/End: Original strand, 18371665 - 18371734
Alignment:
Q  1528 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||| |||||| ||||| |||||   ||||| ||||||||||||||||||||||||||||    
T  18371665 accgtccacatcgaagctagagcaaccgcacaaatgagagacacaccacactcttacccaaaaccttaag 18371734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1527 - 1588
Target Start/End: Complemental strand, 41972316 - 41972255
Alignment:
Q  1527 gaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaa 1588  Q
    ||||||||| || |||||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  41972316 gaccgtccatattgaggctggaacaaccacacaagcaagagtgacgccacactcttacccaa 41972255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1544 - 1596
Target Start/End: Complemental strand, 16524503 - 16524451
Alignment:
Q  1544 ctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    ||||| |||||||||||| |||||||||||||||||||||| |||||||||||    
T  16524503 ctagagcaaccacacaagtaagagagacaccacactcttactcaaaaccttaa 16524451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1532 - 1591
Target Start/End: Original strand, 1013879 - 1013938
Alignment:
Q  1532 tccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaac 1591  Q
    ||||||||||||||||||||||| |||||| || ||||||| ||||||||||| ||||||    
T  1013879 tccacatcgaggctagaacaaccgcacaagtaaaagagacaacacactcttactcaaaac 1013938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1524 - 1571
Target Start/End: Original strand, 3037969 - 3038016
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagac 1571  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  3037969 ggggaccgtccacatcgaggctagaacaaccacacaagatagagagac 3038016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1531 - 1597
Target Start/End: Complemental strand, 9507933 - 9507867
Alignment:
Q  1531 gtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||| ||||||||| | |||  | |||||| |||||||||||||||||||||||||    
T  9507933 gtccacatcgaggcttgaacaaccatataagagatagagacgccacactcttacccaaaaccttaag 9507867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1545 - 1597
Target Start/End: Complemental strand, 9609222 - 9609170
Alignment:
Q  1545 tagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||| |||||||||||| ||||||||||||| ||||| |||||    
T  9609222 tagaacaaccacactagcaagagagacgccacactcttaccgaaaacattaag 9609170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1541 - 1597
Target Start/End: Original strand, 20995433 - 20995489
Alignment:
Q  1541 aggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||| ||| ||||||||||||  |||||||||||||| |||||||||||||||||||    
T  20995433 aggccagagcaaccacacaagtgagagagacaccacattcttacccaaaaccttaag 20995489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1526 - 1597
Target Start/End: Complemental strand, 5420807 - 5420736
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||| ||||||||||||||| |||||||||||||||  || |||||  |||||||||||  |||||||||||    
T  5420807 ggacggtccacatcgaggcttgaacaaccacacaagtgagggagacgtcacactcttacaaaaaaccttaag 5420736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1524 - 1579
Target Start/End: Complemental strand, 9309139 - 9309085
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacact 1579  Q
    ||||||||||||||||||||||||||||||||||  ||  ||||||||||||||||    
T  9309139 ggggaccgtccacatcgaggctagaacaaccaca-tagtgagagagacaccacact 9309085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1528 - 1582
Target Start/End: Original strand, 18372288 - 18372342
Alignment:
Q  1528 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactctt 1582  Q
    ||||||||||||||| ||| | ||||| ||||||| |||||||||||||||||||    
T  18372288 accgtccacatcgagactaaagcaaccgcacaagcgagagagacaccacactctt 18372342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1534 - 1594
Target Start/End: Original strand, 4154678 - 4154736
Alignment:
Q  1534 cacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacctt 1594  Q
    |||||| |||| ||| |||||||||||||  ||||||| ||||||||||||||||||||||    
T  4154678 cacatctaggccagagcaaccacacaagc--gagagacgccacactcttacccaaaacctt 4154736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1525 - 1597
Target Start/End: Original strand, 18380020 - 18380090
Alignment:
Q  1525 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||| ||||||||||| ||||||| || | ||||||||||||   |||||||||||||| ||||||||||||    
T  18380020 gggactgtccacatcgaagctagaagaatcgcacaagcaagagg--caccacactcttactcaaaaccttaag 18380090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1258 - 1345
Target Start/End: Original strand, 36675957 - 36676041
Alignment:
Q  1258 tatataatttgcagtggtgctctcctgcaacaataaaaactaggagtggtatcaaactaggttgggttatatgtaacatcctttgaaa 1345  Q
    |||||| ||||||| |||||||  ||||  ||||||||||  | |||||||||||| |||||| ||||||||| ||||||||||||||    
T  36675957 tatatagtttgcagcggtgctc--ctgcttcaataaaaacctgtagtggtatcaaattaggtt-ggttatatgcaacatcctttgaaa 36676041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1105 - 1162
Target Start/End: Original strand, 35143789 - 35143847
Alignment:
Q  1105 cagggactaaaaccaaagcaaggcatatttaca-ggataagaaccatattttaacctat 1162  Q
    ||||||||||||||||| | ||||||||||||| |||| | |||||||||||| |||||    
T  35143789 cagggactaaaaccaaaacgaggcatatttacacggattaaaaccatattttagcctat 35143847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 32305635 - 32305562
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||| ||| |||||||||  || ||| || | |||| ||||||||||| |||||| ||||||    
T  32305635 ggggaccgtccacatcaaggttagaacaactgcataagtaataaagacgccacactcttatccaaaatcttaag 32305562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 8e-31; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 8e-31
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 29518661 - 29518588
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29518661 ggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaag 29518588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 8e-31
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 29519078 - 29519005
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29519078 ggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaag 29519005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 8e-31
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 32741337 - 32741264
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32741337 ggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaag 32741264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 2578443 - 2578516
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  2578443 ggggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttacccaaaaccttaag 2578516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 2843713 - 2843640
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  2843713 ggggaccgtccacatcgaggctagaacaaccactcaagcaagagagataccacactcttacccaaaaccttaag 2843640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 16455065 - 16454992
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  16455065 ggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaag 16454992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 8e-28
Query Start/End: Original strand, 1517 - 1597
Target Start/End: Original strand, 2578828 - 2578908
Alignment:
Q  1517 gagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| ||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2578828 gagcctgggggaccgtccacatcgaggtcagaacaaccacacaagcaaaagagacaccacactcttacccaaaaccttaag 2578908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 1524 - 1590
Target Start/End: Complemental strand, 3409818 - 3409752
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaa 1590  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3409818 ggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaa 3409752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 1846906 - 1846833
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  1846906 ggggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttatccaaaaccttaag 1846833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 2378284 - 2378211
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||    
T  2378284 ggggaccgtccacatcgaggctagaacaaccactcaagcaagagagacaccacattcttacctaaaaccttaag 2378211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 2579872 - 2579945
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  2579872 ggggaccttccacatcgaggctagaacaaccgcacaagcaagagagacaccacattcttacccaaaaccttaag 2579945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 1501 - 1597
Target Start/End: Original strand, 10074341 - 10074436
Alignment:
Q  1501 gttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||| |||| |||||| ||||||  ||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  10074341 gttgggtcac-aaggggagcctgggggactatccacatcgaggctagaacaaccacactagtgagagagacaccacactcttacccaaaaccttaag 10074436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 1517 - 1597
Target Start/End: Original strand, 12071684 - 12071764
Alignment:
Q  1517 gagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||    
T  12071684 gagcttaggggaccgttcacatcgaggctagaacaaccacacaagtgagagagacgccacactcttacccaaaaccttaag 12071764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 7e-25
Query Start/End: Original strand, 1534 - 1597
Target Start/End: Complemental strand, 3409407 - 3409344
Alignment:
Q  1534 cacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3409407 cacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaag 3409344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1523 - 1597
Target Start/End: Complemental strand, 35210363 - 35210289
Alignment:
Q  1523 aggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||| ||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  35210363 aggggaccgtccacatcgaggctagagcaaccgcacaagcaaaagaaacaccacactcttacccaaaaccttaag 35210289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 2377912 - 2377839
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| |||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||    
T  2377912 ggggaccttccacatcgaggctagaaaaaccactcaagcaagaaagacaccacactcttacccaaaaccttaag 2377839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1499 - 1597
Target Start/End: Complemental strand, 3415642 - 3415543
Alignment:
Q  1499 ttgttgggtcactaaggagagcctaggggaccgtccacatcgaggctaga--acaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    |||||||||||| |||| |||| | ||||||| |||||||||||||||||  |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  3415642 ttgttgggtcac-aaggggagcttgggggaccttccacatcgaggctagagaacaaccgcacaagcaagagagacaccacactcttaccaaaaaccttaa 3415544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 5832027 - 5832100
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  5832027 ggggaccgtctacatcgaggctagaacaaccacacaagtaagagagacaccacacttttacccaaaatcttaag 5832100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 16454733 - 16454660
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||| ||||||    
T  16454733 ggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttatccaaaatcttaag 16454660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 1524 - 1596
Target Start/End: Original strand, 2579109 - 2579181
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||    
T  2579109 ggggaccgtgcacatcgaggctagaacaaccacacgagcaagagagacaccacactcttagccaaagccttaa 2579181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 1533 - 1597
Target Start/End: Complemental strand, 16107827 - 16107763
Alignment:
Q  1533 ccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16107827 ccacatcgaggctagagcaaccgcacaagcaagagagacaccacactcttacccaaaaccttaag 16107763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1522 - 1597
Target Start/End: Original strand, 10073989 - 10074064
Alignment:
Q  1522 taggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||| |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||    
T  10073989 taggggaccgtccacgtcgaggctagaacaaccaaataagcgagagagacaccacacttttacccaaaaccttaag 10074064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1524 - 1596
Target Start/End: Original strand, 14748342 - 14748410
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    ||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  14748342 ggggaccgtccacatcgaggctagaacaaccacacaagcaagag----accacactcttacccaaaaccttaa 14748410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1532 - 1597
Target Start/End: Original strand, 2579500 - 2579565
Alignment:
Q  1532 tccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  2579500 tccacatcgaggttagaacaaccacacaagcaagagagacaccatacttttacccaaaaccttaag 2579565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 3058384 - 3058311
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| ||||||||||||| |||||| |||  |||||||||||||||||||||||||||||||||||||||||    
T  3058384 ggggacggtccacatcgaggttagaaccaccctacaagcaagagagacaccacactcttacccaaaaccttaag 3058311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1517 - 1597
Target Start/End: Original strand, 12085027 - 12085107
Alignment:
Q  1517 gagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||| |||| |||||| | ||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||    
T  12085027 gagcttaggagaccgttcgcatcgaggctagaacaaccacacaagtgagagagacgccacactcttacccaaaaccttaag 12085107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1526 - 1597
Target Start/End: Original strand, 10073618 - 10073689
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||||||| ||||||    
T  10073618 ggaccgtccacatcgatgctagaacaaccacactagtgagagagacaccacactcttacccaaaatcttaag 10073689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1527 - 1597
Target Start/End: Original strand, 6999799 - 6999869
Alignment:
Q  1527 gaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||| ||||||||||||||  |||||||||||| ||||||||||| |||||||||||||    
T  6999799 gaccgtccacatcgagactagaacaaccacattagcaagagagacgccacactcttatccaaaaccttaag 6999869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 1127518 - 1127445
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||  ||||||||||| |||| |||||||| ||| ||||||||| |||||||||||||||||||||||||    
T  1127518 ggggaccacccacatcgaggttagagcaaccacataagtaagagagacgccacactcttacccaaaaccttaag 1127445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 1534 - 1597
Target Start/End: Complemental strand, 26544197 - 26544134
Alignment:
Q  1534 cacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||| ||||||||||||| | ||||||||||||||||| ||||||||||| ||||||||||||    
T  26544197 cacattgaggctagaacaatcgcacaagcaagagagacatcacactcttactcaaaaccttaag 26544134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1525 - 1583
Target Start/End: Complemental strand, 16108208 - 16108150
Alignment:
Q  1525 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactctta 1583  Q
    ||||||||||||||||||| || ||||||| ||||||||||||||||||||||| ||||    
T  16108208 gggaccgtccacatcgaggttataacaaccccacaagcaagagagacaccacaccctta 16108150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1501 - 1597
Target Start/End: Complemental strand, 31714849 - 31714754
Alignment:
Q  1501 gttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||| | ||| ||| || || |||||||||||||||||||||| ||||||||||||| | | | || |||||||||||| ||||||||||||    
T  31714849 gttgggtcattgaggggagtctgggagaccgtccacatcgaggctagagcaaccacacaagcga-aaaaacgccacactcttactcaaaaccttaag 31714754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1531 - 1578
Target Start/End: Complemental strand, 3409452 - 3409405
Alignment:
Q  1531 gtccacatcgaggctagaacaaccacacaagcaagagagacaccacac 1578  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||    
T  3409452 gtccacatcgaggctagaacaaccgcataagcaagagagacaccacac 3409405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1539 - 1597
Target Start/End: Original strand, 1950200 - 1950258
Alignment:
Q  1539 cgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||| |||||| |||||||||  ||||||||||| ||||||||||||    
T  1950200 cgaggctagaacaaccgcacaagtaagagagacgtcacactcttactcaaaaccttaag 1950258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 593707 - 593782
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagca--agagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||| |||||||| |||||||||||  ||||| |  ||||||| |||||||| |||||||||||||||||    
T  593707 ggggaccgtcaacatcgagcctagaacaaccgtacaagtaagagagagataccacactattacccaaaaccttaag 593782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1532 - 1590
Target Start/End: Original strand, 10902438 - 10902496
Alignment:
Q  1532 tccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaa 1590  Q
    |||||||| |||  |||||||||| |||||  |||||||||||||||||||||||||||    
T  10902438 tccacatctaggtcagaacaaccatacaagtgagagagacaccacactcttacccaaaa 10902496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1523 - 1597
Target Start/End: Original strand, 12092481 - 12092555
Alignment:
Q  1523 aggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||  ||||||| |||| ||| ||||| ||||||  |||||||||||||| |||||| ||||||||||||    
T  12092481 aggggaccacccacatccaggccagagcaacctcacaagtgagagagacaccacagtcttactcaaaaccttaag 12092555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1528 - 1597
Target Start/End: Complemental strand, 10911720 - 10911651
Alignment:
Q  1528 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||| ||||||| |||  || |||||||||| ||||||||||  |||||| |||||    
T  10911720 accgtccacatcgaggcttgaacaacaacattagtaagagagacatcacactcttattcaaaactttaag 10911651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1563 - 1597
Target Start/End: Complemental strand, 8482045 - 8482011
Alignment:
Q  1563 aagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||||| ||||||    
T  8482045 aagagagacaccacactcttacccaaaatcttaag 8482011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1510 - 1591
Target Start/End: Original strand, 17135055 - 17135136
Alignment:
Q  1510 ctaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaac 1591  Q
    |||||| ||| || |||||||||||||||| ||||  |||||||| ||||||| | |||| |  |||||||||| |||||||    
T  17135055 ctaaggggagtctgggggaccgtccacatcaaggccggaacaaccgcacaagcgaaagagccgtcacactcttatccaaaac 17135136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1500 - 1597
Target Start/End: Original strand, 30618595 - 30618690
Alignment:
Q  1500 tgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||| | || |||||| |||||||  ||||||  |||| ||| |||||||| ||| ||||||||||||||| | ||||||| |||||||||    
T  30618595 tgttgggtcacgaggg-gagccttggggaccacccacatt-aggcaagagcaaccacataagtaagagagacaccacatttttacccataaccttaag 30618690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 3e-30; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 3e-30
Query Start/End: Original strand, 1498 - 1596
Target Start/End: Complemental strand, 41157177 - 41157077
Alignment:
Q  1498 attgttgggtcact-aaggagagcctagggg-accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacctta 1595  Q
    |||||||||||||| |||| |||||| |||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41157177 attgttgggtcactgaaggggagccttgggggaccgcccacatcgaggctagaacaaccacacaagcaatagagacaccacactcttacccaaaacctta 41157078  T
Q  1596 a 1596  Q
    |    
T  41157077 a 41157077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 5e-29
Query Start/End: Original strand, 1523 - 1597
Target Start/End: Original strand, 3537598 - 3537672
Alignment:
Q  1523 aggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  3537598 aggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaag 3537672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1500 - 1597
Target Start/End: Complemental strand, 9956090 - 9955994
Alignment:
Q  1500 tgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||| | ||||||||||||||||||  ||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  9956090 tgttgggtcacga-ggagagcctaggggaccgctcacatcgaggctagagcaaccgcacaagcaagagagacatcacactcttacccaaaaccttaag 9955994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 41759641 - 41759568
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41759641 ggggaccgtccacatcaaggctagaacaaccacataagcaagagagacaccacactcttacccaaaaccttaag 41759568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 1499 - 1593
Target Start/End: Original strand, 32168673 - 32168767
Alignment:
Q  1499 ttgttgggtcactaaggagagcct-aggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacct 1593  Q
    |||||||||||||| || |||||| ||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  32168673 ttgttgggtcactaggg-gagccttaggggactgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaacct 32168767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 26661522 - 26661595
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26661522 ggggaccgtccatatcgaggcttgaacaaccacacaagcgagagagacaccacactcttacccaaaaccttaag 26661595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 34649596 - 34649523
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||    
T  34649596 ggggaccgtccacatcgaggctagaacaaccacactagcaagagagacgcctcactcttacccaaaaccttaag 34649523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 1533 - 1597
Target Start/End: Complemental strand, 37555878 - 37555814
Alignment:
Q  1533 ccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37555878 ccacatcgaggcttgaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 37555814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 1533 - 1597
Target Start/End: Complemental strand, 37556260 - 37556196
Alignment:
Q  1533 ccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37556260 ccacatcgaggcttgaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 37556196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 7e-25
Query Start/End: Original strand, 1498 - 1597
Target Start/End: Original strand, 5319941 - 5320038
Alignment:
Q  1498 attgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||| |||| |||| | |||||||||| |||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  5319941 attgttgggtcacgaagg-gagctt-ggggaccgtctacattgaggctagaacaaccacataagcaagagagacactacactcttacccaaaaccttaag 5320038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 7e-25
Query Start/End: Original strand, 1518 - 1597
Target Start/End: Complemental strand, 45084540 - 45084461
Alignment:
Q  1518 agcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||| ||||||||||| |||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  45084540 agcctgggggaccgtccgcatcgaggttagaacaaccgcacaagcaagagagacaccactctcttacccaaaaccttaag 45084461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 41142531 - 41142457
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactc-ttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||    
T  41142531 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacgccacactctttaccaaaaaccttaag 41142457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 44290824 - 44290898
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactc-ttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||    
T  44290824 ggggaccgtccacatcgaggctagaacaaccgcacaagcaagagatacaccacactctttacccaaaaccttaag 44290898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1527 - 1597
Target Start/End: Original strand, 48588491 - 48588561
Alignment:
Q  1527 gaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||    
T  48588491 gaccgtccacatcgaggctagaacaaccgcacaagtaagagagacaccgcactcttacccaaaaccttaag 48588561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 11977102 - 11977029
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||||||||||||    
T  11977102 ggggaccgtccacatcgaggctagaactaccgcacttgcaagagagacaccacactcttacccaaaaccttaag 11977029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 11977438 - 11977365
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||| ||||||||||||||||||||||||    
T  11977438 ggggaccgtccacatcgaggctagaacaaccgcacttgcaagagagacatcacactcttacccaaaaccttaag 11977365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 14319025 - 14318952
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||| ||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||    
T  14319025 ggggaccgtccacattgaggctagaacaaccgcacaaataagagagacaccacactcttacccaaaaccttaag 14318952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 31767161 - 31767234
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  31767161 ggggaccgtccacatcgagtctagaacaaccacacaagcaagatagacgtcacactcttacccaaaaccttaag 31767234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1502 - 1593
Target Start/End: Complemental strand, 41157557 - 41157464
Alignment:
Q  1502 ttgggtcact-aaggagagcctag-gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacct 1593  Q
    |||||||||| |||| |||||| | ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  41157557 ttgggtcactgaaggggagccttgagggaccgcccacatcgaggctagaacaaccacacaagcaagacagacaccacactcttactcaaaacct 41157464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 44290458 - 44290531
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||||||||||||||||||    
T  44290458 ggggaccgtccacatcgaggctagaacaaccgtacaagcaagaaagacaccatactcttacccaaaaccttaag 44290531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1532 - 1597
Target Start/End: Complemental strand, 40082556 - 40082491
Alignment:
Q  1532 tccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  40082556 tccacatcgaggctagaacaaacgcacaagcaagagagataccacactcttacccaaaaccttaag 40082491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 45493974 - 45494047
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||| ||||||| |||||    
T  45493974 ggggaccgtccacatcgaggcttgaacaaccacataaggaagagagacaccacactcttatccaaaactttaag 45494047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1521 - 1596
Target Start/End: Original strand, 37850597 - 37850672
Alignment:
Q  1521 ctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    |||||||||||||||||||||||||||| ||||| ||||||  |||||||||||||||||||| || |||||||||    
T  37850597 ctaggggaccgtccacatcgaggctagagcaaccgcacaagtgagagagacaccacactcttatccgaaaccttaa 37850672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1531 - 1597
Target Start/End: Original strand, 24600321 - 24600387
Alignment:
Q  1531 gtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||||||||||| ||||||||||||    
T  24600321 gtccacatcgaggctagaacaaccatactagcgagagagacaccacactcttacacaaaaccttaag 24600387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1547 - 1597
Target Start/End: Original strand, 26661921 - 26661971
Alignment:
Q  1547 gaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26661921 gaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 26661971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1539 - 1597
Target Start/End: Original strand, 38804370 - 38804428
Alignment:
Q  1539 cgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  38804370 cgaggctagaacaaccgcacaagcaagagagacactacactcttacccaaaaccttaag 38804428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1500 - 1597
Target Start/End: Original strand, 22077472 - 22077568
Alignment:
Q  1500 tgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||| |||| |||||| |||||||||||| ||||| ||| |||||||| || |||  |||||||| |||||||||||||||||||||||||    
T  22077472 tgttgggtcac-aaggggagcctgggggaccgtccatatcgatgcttgaacaaccgcataagtgagagagacgccacactcttacccaaaaccttaag 22077568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 39066201 - 39066273
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||| ||||| ||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||    
T  39066201 ggggaccgtc-acatcaaggctagaacaaccacataagtaagagagacaccacactcttatccaaaaccttaag 39066273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 50051689 - 50051761
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||||| ||||||||||||    
T  50051689 ggggaccgtccacatcgatgctagaacaac-acataaacaagagagacaccacactcttacgcaaaaccttaag 50051761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1526 - 1597
Target Start/End: Original strand, 3875333 - 3875404
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||| ||||| ||||||| |||||||||||    
T  3875333 ggaccgtccacatcgaggctagaacaaccacactagtgagagagactccacattcttacctaaaaccttaag 3875404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1527 - 1597
Target Start/End: Complemental strand, 17294733 - 17294662
Alignment:
Q  1527 gaccgtccacatcgaggctagaacaacca-cacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||| |||||  || |||| ||||||||||||||||||||||||||||||||||    
T  17294733 gaccgtccacatcgaggctagagcaacctgcataagcgagagagacaccacactcttacccaaaaccttaag 17294662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1534 - 1597
Target Start/End: Complemental strand, 45839779 - 45839716
Alignment:
Q  1534 cacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||| ||||||| | |||||||||||||||||||||| |||||||||||||||||||    
T  45839779 cacatcgaggccagaacaatcccacaagcaagagagacaccacaatcttacccaaaaccttaag 45839716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1523 - 1597
Target Start/End: Complemental strand, 34364666 - 34364592
Alignment:
Q  1523 aggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||| ||| ||||||||||||||||| ||||| || |||| ||||||||| ||||||||||||||||||||||||    
T  34364666 agggaaccatccacatcgaggctagagcaaccgcataagcgagagagacatcacactcttacccaaaaccttaag 34364592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1528 - 1597
Target Start/End: Original strand, 66476 - 66545
Alignment:
Q  1528 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||| ||||||||||||||| ||||||| |||||||| | | |||||||||||||||||||||    
T  66476 accgtccacattgaggctagaacaaccgcacaagcgagagagacgctatactcttacccaaaaccttaag 66545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1500 - 1596
Target Start/End: Complemental strand, 5575284 - 5575190
Alignment:
Q  1500 tgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    |||||||||||| ||||||| || ||||||  ||||||||||||||||||| ||| || |||  |||||||| ||||||||||| ||||||||||||    
T  5575284 tgttgggtcactgaggagagtctgggggacattccacatcgaggctagaactacctcataag--agagagacgccacactcttatccaaaaccttaa 5575190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 29798357 - 29798284
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||| | ||||||| ||||||||||||||  ||||||||||||||||||||||| |||| ||||||||    
T  29798357 ggggaccgtctatatcgaggttagaacaaccacacttgcaagagagacaccacactcttatccaagaccttaag 29798284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 50052024 - 50052096
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| ||||||||||||| ||||||||| ||| || |||||||||||||||||||||||||||||| |||||    
T  50052024 ggggactgtccacatcgaggttagaacaac-acataaacaagagagacaccacactcttacccaaaactttaag 50052096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1523 - 1583
Target Start/End: Original strand, 21378058 - 21378118
Alignment:
Q  1523 aggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactctta 1583  Q
    |||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||||    
T  21378058 aggggaccgtccacattgaggctagaacaaccacacaagcaatatagacgccacactctta 21378118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 1528 - 1597
Target Start/End: Complemental strand, 3550871 - 3550805
Alignment:
Q  1528 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||||  |   ||||||||||||||||||||||||||||||| |||||    
T  3550871 accgtccacatcgaggctagaacaaccgta---gcaagagagacaccacactcttacccaaaactttaag 3550805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1523 - 1597
Target Start/End: Complemental strand, 34365084 - 34365010
Alignment:
Q  1523 aggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||| ||| |||||||||||| |||| ||||  || |||| ||||||||||||||||||||||||||||||||||    
T  34365084 agggaaccatccacatcgaggttagagcaactgcataagcgagagagacaccacactcttacccaaaaccttaag 34365010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1500 - 1595
Target Start/End: Original strand, 22077806 - 22077900
Alignment:
Q  1500 tgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacctta 1595  Q
    ||||||||||| |||| |||||| | |||||||||||||||| ||| |||||||| || |||  | |||||| |||||||||||||| ||||||||    
T  22077806 tgttgggtcac-aaggggagcctggaggaccgtccacatcgatgcttgaacaaccgcataagtgaaagagacgccacactcttaccccaaacctta 22077900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1523 - 1597
Target Start/End: Original strand, 19283454 - 19283528
Alignment:
Q  1523 aggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||  ||||||| |||||||| ||||| ||||||  |||||||| ||||||||||| |||||||||||||    
T  19283454 aggggacctcccacatccaggctagagcaaccgcacaagtgagagagacgccacactcttatccaaaaccttaag 19283528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1517 - 1595
Target Start/End: Original strand, 22077103 - 22077181
Alignment:
Q  1517 gagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacctta 1595  Q
    |||||| |||||||||||||||||||||| |||||||| || |||  || |||||  |||||||||| |||||||||||    
T  22077103 gagcctgggggaccgtccacatcgaggcttgaacaaccgcataagtgagggagacgtcacactcttatccaaaacctta 22077181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 41184408 - 41184484
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagac---accacactcttacccaaaaccttaag 1597  Q
    |||||||||| ||||||||||| |||||||| |||||| ||||| |||   | ||||||||||||||||||||||||    
T  41184408 ggggaccgtcgacatcgaggctggaacaaccgcacaagtaagagcgacaatatcacactcttacccaaaaccttaag 41184484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1556 - 1597
Target Start/End: Original strand, 32594748 - 32594789
Alignment:
Q  1556 cacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  32594748 cacaagtaagagagacaccacactcttacccaaaaccttaag 32594789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1524 - 1583
Target Start/End: Original strand, 4266798 - 4266855
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactctta 1583  Q
    |||||||| |||||||||||||||||||||  |||||| |||||||||| ||||||||||    
T  4266798 ggggaccgcccacatcgaggctagaacaac--cacaagtaagagagacatcacactctta 4266855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1530 - 1597
Target Start/End: Complemental strand, 22793431 - 22793364
Alignment:
Q  1530 cgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| || ||||| |||||||||||||||| |||||||||  ||||||||||| ||||||| ||||    
T  22793431 cgtccatattgaggccagaacaaccacacaagtaagagagacgtcacactcttactcaaaaccgtaag 22793364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1498 - 1597
Target Start/End: Original strand, 47380141 - 47380240
Alignment:
Q  1498 attgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||| | ||| ||| ||||||||||  ||||||| ||||| || |||||| |||||  |||||||   |||||||||||||||||| |||||    
T  47380141 attgttgggtcaattaggggagtctaggggaccacccacatctaggcttgagcaaccagacaagtgagagagatgtcacactcttacccaaaactttaag 47380240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1522 - 1596
Target Start/End: Original strand, 5996870 - 5996944
Alignment:
Q  1522 taggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    |||||||| | |||||||  ||||||| |||||||||||   |||||||||||||||||| || |||||||||||    
T  5996870 taggggactgcccacatctcggctagagcaaccacacaaatgagagagacaccacactctcactcaaaaccttaa 5996944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1532 - 1597
Target Start/End: Original strand, 5528762 - 5528827
Alignment:
Q  1532 tccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||| |||||||||| || ||  ||||||||| ||||||  |||||||||||||||||    
T  5528762 tccacatcgaggatagaacaaccgcataaagaagagagacgccacacatttacccaaaaccttaag 5528827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1530 - 1579
Target Start/End: Original strand, 24131994 - 24132043
Alignment:
Q  1530 cgtccacatcgaggctagaacaaccacacaagcaagagagacaccacact 1579  Q
    |||| |||||||||||||||||||||||| ||  ||||||||||||||||    
T  24131994 cgtctacatcgaggctagaacaaccacactagtgagagagacaccacact 24132043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1499 - 1597
Target Start/End: Original strand, 66063 - 66160
Alignment:
Q  1499 ttgttgggtca-ctaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||| |||||| ||||   |||||  ||| |||||||||| |||||||||| |||||   ||||| | |||||||||||||||||||||||||    
T  66063 ttgttgggtcatctaaggggagctcgggggattgtctacatcgaggccagaacaaccatacaagt--gagaggcgccacactcttacccaaaaccttaag 66160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 999 - 1067
Target Start/End: Original strand, 9376158 - 9376226
Alignment:
Q  999 aaaaacgtagaactctctttatccattattatctaaactttagtgtcgagtttgtggaaagacaaacaa 1067  Q
    |||||||||||||||||||||   | ||||||  |||||| ||||| ||||||||| ||||||||||||    
T  9376158 aaaaacgtagaactctctttagttaatattatgaaaacttgagtgtagagtttgtgcaaagacaaacaa 9376226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1562 - 1597
Target Start/End: Original strand, 44043810 - 44043845
Alignment:
Q  1562 caagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||| ||||||    
T  44043810 caagagagacaccacactcttacccaaaatcttaag 44043845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1525 - 1596
Target Start/End: Complemental strand, 44092051 - 44091980
Alignment:
Q  1525 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    ||||||||| |||||||||| |||||||| | |||||  ||| |||| ||||||||||||||| || |||||    
T  44092051 gggaccgtctacatcgaggccagaacaacaaaacaagtgagaaagacgccacactcttacccacaatcttaa 44091980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1525 - 1590
Target Start/End: Complemental strand, 9499136 - 9499071
Alignment:
Q  1525 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaa 1590  Q
    ||||||||||||||  ||| || |||||||||||||| || || ||||||||||| ||| ||||||    
T  9499136 gggaccgtccacatataggataaaacaaccacacaagtaaaagtgacaccacacttttatccaaaa 9499071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1564 - 1597
Target Start/End: Complemental strand, 12466401 - 12466368
Alignment:
Q  1564 agagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||| |||||||||||    
T  12466401 agagagacaccacactcttaccaaaaaccttaag 12466368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1500 - 1597
Target Start/End: Original strand, 30630614 - 30630711
Alignment:
Q  1500 tgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| |||||||  ||| || |||||| |  ||||||||||| |||||||||||| |||  | || ||| || |||||||||||||||| |||||    
T  30630614 tgttggggcactaagtggagtctgggggactgctcacatcgaggccagaacaaccacataagtgatagggacgccccactcttacccaaaactttaag 30630711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 2e-28; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 1085616 - 1085689
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  1085616 ggggaccgtccacatcgaggctagaacaaccacacaagtaagagagacgccacactcttacccaaaaccttaag 1085689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 37533364 - 37533437
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  37533364 ggggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttacccaaaaccttaag 37533437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 47129527 - 47129454
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  47129527 ggggaccgtccacatcgaggctagatcaaccgcacaagcaagagagacaccacactcttacccaaaaccttaag 47129454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 1526 - 1597
Target Start/End: Complemental strand, 37167937 - 37167866
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  37167937 ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaactttaag 37167866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 23377 - 23450
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  23377 ggggaccgtccaaatcgaggctagaacaaccgcacatgcaagagagacaccacactcttacccaaaaccttaag 23450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1500 - 1597
Target Start/End: Complemental strand, 7517762 - 7517665
Alignment:
Q  1500 tgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||| ||| ||| ||||| ||||||||  |||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||    
T  7517762 tgttgggttactgaggggagccaaggggaccacccacatcgaggctagaacaaccacacaagtgagacagacaccacactcttacccaaaaccttaag 7517665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 40094774 - 40094847
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  40094774 ggggaccgaccacatcgaggctagaacaacctcacaagcaagagagacgccacactcttacccaaaaccttaag 40094847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 45433399 - 45433326
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  45433399 ggggaccgaccacatcgaggctagaacaaccccacaagcaagagagacaccacactcttacccaaaatcttaag 45433326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 7e-25
Query Start/End: Original strand, 1526 - 1597
Target Start/End: Original strand, 34218036 - 34218107
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  34218036 ggaccgtccacatcgaggcttgaacaaccatacaagcgagagagacaccacactcttacccaaaaccttaag 34218107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1535 - 1597
Target Start/End: Complemental strand, 45754862 - 45754800
Alignment:
Q  1535 acatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45754862 acatcgaggcttgaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 45754800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 6054718 - 6054645
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||| ||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  6054718 ggggaccgtccacatcaaggctagaacaaccatacaagtaggagagacaccacactcttacccaaaaccttaag 6054645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 11845349 - 11845276
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||    
T  11845349 ggggaccgtctacatcgaggctagaacaactgcacaagcaagagagacaccacactcttatccaaaaccttaag 11845276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1525 - 1597
Target Start/End: Original strand, 28300569 - 28300642
Alignment:
Q  1525 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactctta-cccaaaaccttaag 1597  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28300569 gggatcgtccacatcgaggctagaataaccacacaagcaagagagacaccacactcttaccccaaaaccttaag 28300642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1500 - 1597
Target Start/End: Complemental strand, 29157747 - 29157650
Alignment:
Q  1500 tgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||| | ||||||| || || ||||||||||||| || ||||| |||| |||| ||||||||||||||||||||||||||||||||||||||    
T  29157747 tgttgggtcagtgaggagagtctgggagaccgtccacatcaagactagagcaactacacgagcaagagagacaccacactcttacccaaaaccttaag 29157650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 30244428 - 30244355
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| |||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  30244428 ggggaccatccacatcgaggcttgaacaaccacacaagtgagagagacaccacactcttacccaaaaccttaag 30244355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 1526 - 1594
Target Start/End: Original strand, 37532753 - 37532821
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacctt 1594  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  37532753 ggaccgtccacatcgaggctagaacaacagcacaagctagagagacaccacactcttacccaaaacctt 37532821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1526 - 1597
Target Start/End: Complemental strand, 9901799 - 9901728
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||| ||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  9901799 ggacagtccacaccgaggctagaacaaccgcactagcaagagagacaccacactcttacccaaaaccttaag 9901728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1534 - 1597
Target Start/End: Complemental strand, 19122879 - 19122816
Alignment:
Q  1534 cacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19122879 cacatcgagactagaacaaccacacaagcaagatagacaccacactcttacccaaaaccttaag 19122816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 7e-22
Query Start/End: Original strand, 1496 - 1595
Target Start/End: Original strand, 118273 - 118372
Alignment:
Q  1496 aaattgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagag--agacaccacactcttacccaaaacct 1593  Q
    ||||||||||||||||  || |||||| |||||||||||||||| | |||||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  118273 aaattgttgggtcactgggg-gagcct-ggggaccgtccacatcaaagctagaacaaccacacaagcaagagatagacgccacactcttacccaaaacct 118370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 22567039 - 22567112
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| |||||||||||||  |||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  22567039 ggggaccatccacatcgaggcccgaacaaccccacaagcaagagagacaccacactcttaccaaaaaccttaag 22567112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 30032725 - 30032652
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||   ||||||||||||||||||||||||    
T  30032725 ggggaccgtccacatcgaggatagaacaaccgcacaagcaagagagatgtcacactcttacccaaaaccttaag 30032652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 37533011 - 37533083
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||| |||||||| | |||||||||||||||||||||||| |||||||||||||||||    
T  37533011 ggggaccgtccacatcgaggttagaacaagcgcacaagcaagagagacaccacact-ttacccaaaaccttaag 37533083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1499 - 1597
Target Start/End: Original strand, 28300228 - 28300326
Alignment:
Q  1499 ttgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||| ||||| ||| |  | |||||||||||||||||||  ||||||||||||  ||||||||||| |||||||||||||||||| ||||||    
T  28300228 ttgttgggtcaataaggggagtcaggaggaccgtccacatcgaggcccgaacaaccacacttgcaagagagacgccacactcttacccaaaatcttaag 28300326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1532 - 1597
Target Start/End: Original strand, 36939741 - 36939806
Alignment:
Q  1532 tccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||| || |||||||||| |||||||||| |||||||||||||||||    
T  36939741 tccacatcgaggctagaacaaccgcataagcaagagaaacaccacacttttacccaaaaccttaag 36939806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 45434794 - 45434721
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||  ||||||||||||||||||||  |||||| |||||||||| ||||||||||||||||||||||||    
T  45434794 ggggaccgatcacatcgaggctagaacaactccacaagtaagagagacatcacactcttacccaaaaccttaag 45434721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 30245231 - 30245162
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| |||||||||||||| |||||||||||||||    ||||||||||||||||||||||||||||||||    
T  30245231 ggggaccatccacatcgaggcttgaacaaccacacaag----agagacaccacactcttacccaaaaccttaag 30245162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 30253646 - 30253577
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| |||||||||||||| |||||||||||||||    ||||||||||||||||||||||||||||||||    
T  30253646 ggggaccatccacatcgaggcttgaacaaccacacaag----agagacaccacactcttacccaaaaccttaag 30253577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1498 - 1581
Target Start/End: Complemental strand, 30244535 - 30244453
Alignment:
Q  1498 attgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactct 1581  Q
    |||||||||||| | ||| ||||||  ||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  30244535 attgttgggtca-tgaggggagcctgagggaccgtccacatcgaggcttgaacaaccacacaagtgagagagacaccacactct 30244453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1498 - 1581
Target Start/End: Complemental strand, 30253753 - 30253671
Alignment:
Q  1498 attgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactct 1581  Q
    |||||||||||| | ||| |||||| |||||| ||||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  30253753 attgttgggtca-tgaggggagcctgggggacagtccacatcgaggcttgaacaaccacacaagtgagagagacaccacactct 30253671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 8128441 - 8128514
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| || |||||||| ||||||||||||||| |||| |||| ||||||||||||||| |||||||||||||    
T  8128441 ggggactgttcacatcgatgctagaacaaccacataagcgagagtgacaccacactcttaaccaaaaccttaag 8128514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 24177593 - 24177520
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||| |||||||||  |||||| |||||||||||||||| ||||||||||||| ||||| |||||    
T  24177593 ggggaccgtccacgtcgaggctaagacaaccgcacaagcaagagagacgccacactcttaccaaaaactttaag 24177520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1500 - 1581
Target Start/End: Complemental strand, 30245336 - 30245256
Alignment:
Q  1500 tgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactct 1581  Q
    |||||||||| ||||| |||| | ||||||||||||||| |||||| |||||||||||||||  ||||||||||||||||||    
T  30245336 tgttgggtca-taaggggagcatgggggaccgtccacattgaggcttgaacaaccacacaagtgagagagacaccacactct 30245256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 41854792 - 41854719
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||| |||| ||||||||||||||| |||||| |||| ||||  ||||||||||||||||||||||||    
T  41854792 ggggaccgtctacattgaggctagaacaaccgcacaagtaagaaagacgtcacactcttacccaaaaccttaag 41854719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1524 - 1596
Target Start/End: Complemental strand, 47129253 - 47129181
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    |||||||||| |||| |||||||||||||||||||  |  ||||||||||||||||| |||||||||||||||    
T  47129253 ggggaccgtctacattgaggctagaacaaccacacttgtgagagagacaccacactcctacccaaaaccttaa 47129181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 1527 - 1597
Target Start/End: Complemental strand, 14681663 - 14681595
Alignment:
Q  1527 gaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||| ||||||||||||||||||  |   |||||||||||||||||||||||||||||||||    
T  14681663 gaccgtccacatcaaggctagaacaaccacacttg--tgagagacaccacactcttacccaaaaccttaag 14681595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1547 - 1597
Target Start/End: Original strand, 24838724 - 24838774
Alignment:
Q  1547 gaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  24838724 gaacaaccacacaagcaagagagacgtcacactcttacccaaaaccttaag 24838774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1499 - 1572
Target Start/End: Complemental strand, 7517840 - 7517767
Alignment:
Q  1499 ttgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagaca 1572  Q
    ||||||||||||| ||| ||||| ||||||||  ||| |||||||||||||||||||||||||  |||||||||    
T  7517840 ttgttgggtcactgaggggagccaaggggaccacccatatcgaggctagaacaaccacacaagtgagagagaca 7517767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1499 - 1572
Target Start/End: Complemental strand, 7518106 - 7518033
Alignment:
Q  1499 ttgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagaca 1572  Q
    ||||||||||||| ||| ||||| ||||||||  ||| |||||||||||||||||||||||||  |||||||||    
T  7518106 ttgttgggtcactgaggggagccaaggggaccacccatatcgaggctagaacaaccacacaagtgagagagaca 7518033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1553 - 1597
Target Start/End: Complemental strand, 7554154 - 7554110
Alignment:
Q  1553 ccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  7554154 ccacacaagcgagagagacaccacactcttacccaaaaccttaag 7554110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1525 - 1597
Target Start/End: Complemental strand, 36623117 - 36623045
Alignment:
Q  1525 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||| |||  ||||||| |||||||| ||||||| ||||| |||| ||||||||||||||||    
T  36623117 gggaccgtccacatcaaggtcagaacaatcacacaagtaagagaggcaccatactcctacccaaaaccttaag 36623045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1527 - 1597
Target Start/End: Complemental strand, 20599471 - 20599399
Alignment:
Q  1527 gaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccaca--ctcttacccaaaaccttaag 1597  Q
    |||||| |||||| ||| || |||||||| |||||||||||||||||||||  |||||||||||||| |||||    
T  20599471 gaccgttcacatcaaggttaaaacaaccatacaagcaagagagacaccacactctcttacccaaaacgttaag 20599399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1528 - 1597
Target Start/End: Original strand, 40230295 - 40230364
Alignment:
Q  1528 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||| |||| ||||| ||| ||||  ||||||||||||||| ||| |||||||||||||||||    
T  40230295 accgtccacatagaggttagaataactacacttgcaagagagacaccagacttttacccaaaaccttaag 40230364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1537 - 1590
Target Start/End: Complemental strand, 45755072 - 45755019
Alignment:
Q  1537 atcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaa 1590  Q
    ||||||||| ||||||||||||||| ||| ||||||||||||| ||||||||||    
T  45755072 atcgaggcttgaacaaccacacaagtaagggagacaccacacttttacccaaaa 45755019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1556 - 1597
Target Start/End: Original strand, 1085280 - 1085321
Alignment:
Q  1556 cacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| |||||| ||||||||||||||||||||||||||||    
T  1085280 cacaaggaagagaaacaccacactcttacccaaaaccttaag 1085321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1535 - 1596
Target Start/End: Original strand, 40094424 - 40094485
Alignment:
Q  1535 acatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    |||||| |||||||||||||||| ||| |||| ||||  |||||||||||||||||| ||||    
T  40094424 acatcggggctagaacaaccacataagtaagaaagacgtcacactcttacccaaaactttaa 40094485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1062 - 1139
Target Start/End: Complemental strand, 37952766 - 37952690
Alignment:
Q  1062 aaacaaaatattttgcagggatctttttctacaannnnnnnnacagggactaaaaccaaagcaaggcatatttacagg 1139  Q
    ||||||||||||||||||||| ||||||||||||        ||||||||||||||||||  ||| ||||||||||||    
T  37952766 aaacaaaatattttgcagggacctttttctacaa-tttttttacagggactaaaaccaaaataagacatatttacagg 37952690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1530 - 1590
Target Start/End: Original strand, 41910592 - 41910652
Alignment:
Q  1530 cgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaa 1590  Q
    |||||||||||||| ||||||||||||||  |  ||||| |||||||||||||||| ||||    
T  41910592 cgtccacatcgaggttagaacaaccacacttgtgagagaaacaccacactcttaccaaaaa 41910652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1533 - 1587
Target Start/End: Original strand, 4719305 - 4719359
Alignment:
Q  1533 ccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttaccca 1587  Q
    ||||| |||||||||| ||||| ||||| ||||||| | ||||||||||||||||    
T  4719305 ccacaacgaggctagagcaaccgcacaaacaagagaaataccacactcttaccca 4719359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 15902457 - 15902385
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||  ||||||| |||| ||||||| ||||||||  |||| ||||||||||| ||| |||||||||||||    
T  15902457 ggggaccacccacatccaggc-agaacaatcacacaagtgagagcgacaccacacttttatccaaaaccttaag 15902385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1564 - 1597
Target Start/End: Original strand, 21416181 - 21416214
Alignment:
Q  1564 agagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||| ||||    
T  21416181 agagagacaccacactcttacccaaaaccctaag 21416214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 2e-28; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 6422268 - 6422195
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6422268 ggggacagtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacctaaaaccttaag 6422195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 36178605 - 36178678
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36178605 ggggatcgtccacatagaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 36178678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 1527 - 1597
Target Start/End: Complemental strand, 962753 - 962683
Alignment:
Q  1527 gaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  962753 gaccgtccacatcgaggctagaacaaccacacaagcaagagtgacaacacactcttacccaaaaccttaag 962683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1593
Target Start/End: Complemental strand, 6421543 - 6421474
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacct 1593  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6421543 ggggaccgtccacatcgagactagaacaaccgcacaagcaagagagacaccacactcttacccaaaacct 6421474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 6421889 - 6421816
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  6421889 ggggaccgtccacatcgaggccagaacaaccacacaagttagagagacaccacactcttacccaaaaccttaag 6421816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 15511495 - 15511568
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15511495 ggggatcgtccacatcgagactagaacaaccacacaagcaagagagacaccacactcttacccaaaatcttaag 15511568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 37106082 - 37106009
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||    
T  37106082 ggggaccgtccacatcgaggctagaacaaccgtacaagcaagagagacaccacactcttacccaaaatcttaag 37106009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 1501 - 1597
Target Start/End: Complemental strand, 3672882 - 3672786
Alignment:
Q  1501 gttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||| || |||||  ||| ||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  3672882 gttgggtcactagggggagccaggggaaccgtccacatcgagactagaacaaccacacaattaagagagacaccacactcttacccaaaatcttaag 3672786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 7e-25
Query Start/End: Original strand, 1526 - 1597
Target Start/End: Complemental strand, 37106344 - 37106273
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||    
T  37106344 ggaccgtccacatcgaggctagaacaatcgcacaagcaagagaaacaccacactcttacccaaaaccttaag 37106273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1495 - 1597
Target Start/End: Original strand, 41283446 - 41283548
Alignment:
Q  1495 taaattgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacctt 1594  Q
    |||| |||||||| | | ||| |||| | |||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||| ||||||||    
T  41283446 taaactgttgggtaagtgaggggagcatgggggaccgtccacatcaaggctagaacaaccacacaaacaagagagacgccacactcttacctaaaacctt 41283545  T
Q  1595 aag 1597  Q
    |||    
T  41283546 aag 41283548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 5542625 - 5542698
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  5542625 ggggaccgtccacatcgagacttgaacaaccgcacaagcaagagagacaccacactcttaccaaaaaccttaag 5542698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1500 - 1597
Target Start/End: Original strand, 14745643 - 14745740
Alignment:
Q  1500 tgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||| | || ||||   |||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  14745643 tgttgggtcacgagggggagctcgggggactgtccacatcgaggctagaacaaccacacttgcaagagagacgccacactcttacccaaaaccttaag 14745740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 35580724 - 35580797
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||| || ||||||||||||||||||||||    
T  35580724 ggggaccgtccacatcgaggctagaacaaccccacaaacaagagagacgccgcactcttacccaaaaccttaag 35580797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 36178171 - 36178244
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  36178171 ggggaccgtctacatcgaggctataacaaccacacaagcaagagaggcaccacactcttacccaaaatcttaag 36178244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 42514807 - 42514734
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||| ||||||    
T  42514807 ggggaccgtccacatcgaggctagaacaaccccacaagtaagagagacgccacactcttacccaaaatcttaag 42514734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1530 - 1597
Target Start/End: Complemental strand, 15880415 - 15880348
Alignment:
Q  1530 cgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  15880415 cgtccacatcgaggctaaaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaag 15880348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 7e-22
Query Start/End: Original strand, 1498 - 1596
Target Start/End: Complemental strand, 3673251 - 3673154
Alignment:
Q  1498 attgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    ||||||||||||||  || |||||  ||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||| |||||| |||||    
T  3673251 attgttgggtcactgggg-gagccagggggaccgtccacatcgaggctagaacaaccacactagtaagagagacatcacactcttagccaaaatcttaa 3673154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 7e-22
Query Start/End: Original strand, 1527 - 1597
Target Start/End: Complemental strand, 23346391 - 23346321
Alignment:
Q  1527 gaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||    
T  23346391 gaccgtccacatctaggctagaacaaccgcacaagcaagagagacatcacactcttaccgaaaaccttaag 23346321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 7e-22
Query Start/End: Original strand, 1531 - 1597
Target Start/End: Original strand, 36005887 - 36005953
Alignment:
Q  1531 gtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||    
T  36005887 gtccacatcgaggctagaacaaccccacaagcaagagagacgccacacttttacccaaaaccttaag 36005953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1528 - 1597
Target Start/End: Original strand, 5543002 - 5543071
Alignment:
Q  1528 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| ||||||    
T  5543002 accgtccacatcgaggcttgaacaaccgcacaagcaatagagacaccacactcttacccaaaatcttaag 5543071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1535 - 1596
Target Start/End: Original strand, 40163383 - 40163444
Alignment:
Q  1535 acatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40163383 acatcgaggttagaacaaccacacaagcaagagagacaccacacttttacccaaaaccttaa 40163444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 40734040 - 40733967
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||||| || |||||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  40734040 ggggaccgtccacatcgagacttgaacaaccacacaagcgagacagacaccacactcttacccaaaactttaag 40733967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1526 - 1597
Target Start/End: Complemental strand, 33731804 - 33731733
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||  |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||    
T  33731804 ggaccgtttacatcgaggctagaacaaccgcataagcaagagagacaccatactcttacccaaaaccttaag 33731733  T

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Target: chr2; HSP #24
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1528 - 1594
Target Start/End: Complemental strand, 6421780 - 6421714
Alignment:
Q  1528 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacctt 1594  Q
    |||||||||||||||||  |||||||||||||||  |||||||||||||||||||||||||||||||    
T  6421780 accgtccacatcgaggccggaacaaccacacaagttagagagacaccacactcttacccaaaacctt 6421714  T

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Target: chr2; HSP #25
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1524 - 1590
Target Start/End: Complemental strand, 6713135 - 6713069
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaa 1590  Q
    ||||||||||||||||||||||||||||| | || |||||||||||||| |||||||||||||||||    
T  6713135 ggggaccgtccacatcgaggctagaacaatcccataagcaagagagacatcacactcttacccaaaa 6713069  T

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Target: chr2; HSP #26
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1524 - 1590
Target Start/End: Complemental strand, 29676687 - 29676621
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaa 1590  Q
    |||||||||||||||||||| | ||| |||| |||||||||||||||||||||||||||||||||||    
T  29676687 ggggaccgtccacatcgaggtttgaataaccccacaagcaagagagacaccacactcttacccaaaa 29676621  T

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Target: chr2; HSP #27
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1527 - 1597
Target Start/End: Original strand, 40679632 - 40679702
Alignment:
Q  1527 gaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||| ||||||||||| |||||| ||||||||| |||||||||||||||||| ||||||    
T  40679632 gaccgtccacatcgagactagaacaaccccacaagtaagagagacgccacactcttacccaaaatcttaag 40679702  T

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Target: chr2; HSP #28
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1499 - 1596
Target Start/End: Original strand, 37632574 - 37632669
Alignment:
Q  1499 ttgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaa 1596  Q
    |||||||| |||| ||| ||||| ||||| |||||||||||||||||||||||| |||||  | |||||| |||||||||||||||||||||||||||    
T  37632574 ttgttgggacactgaggggagcc-agggg-ccgtccacatcgaggctagaacaatcacacttgtaagagatacaccacactcttacccaaaaccttaa 37632669  T

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Target: chr2; HSP #29
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 40733675 - 40733602
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| ||||||||||| || |||| ||||||||||| |||||||||||||||||||||||||||| |||||    
T  40733675 ggggaccatccacatcgagacttgaactaccacacaagcgagagagacaccacactcttacccaaaactttaag 40733602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1538 - 1597
Target Start/End: Complemental strand, 5367599 - 5367540
Alignment:
Q  1538 tcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||    
T  5367599 tcgaggctagaacaactgcacaagcaagagagacgccacactcttacccaaaaccttaag 5367540  T

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Target: chr2; HSP #31
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1525 - 1597
Target Start/End: Original strand, 38796619 - 38796693
Alignment:
Q  1525 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccac--actcttacccaaaaccttaag 1597  Q
    ||||||||| ||||||||||| |||||||||||||||||| |||||| ||||  |||||||||||||||||||||    
T  38796619 gggaccgtcgacatcgaggcttgaacaaccacacaagcaatagagacgccacatactcttacccaaaaccttaag 38796693  T

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Target: chr2; HSP #32
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1523 - 1597
Target Start/End: Complemental strand, 7598387 - 7598313
Alignment:
Q  1523 aggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||| |||||||||||| |||||||| ||||||  |||||||||||| | |||||||||||||||||||    
T  7598387 aggggaccgttcacatcgaggcttgaacaaccgcacaagtgagagagacaccatattcttacccaaaaccttaag 7598313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1534 - 1583
Target Start/End: Complemental strand, 1770040 - 1769991
Alignment:
Q  1534 cacatcgaggctagaacaaccacacaagcaagagagacaccacactctta 1583  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1770040 cacatcgaggctagaacaacctcacaagcaagagagacaccacactctta 1769991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1529 - 1597
Target Start/End: Complemental strand, 7598754 - 7598686
Alignment:
Q  1529 ccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||||| ||| |||||||||||||||  |||||||||||||||||||||| ||||| |||||    
T  7598754 ccgtccacatcgatgcttgaacaaccacacaagtgagagagacaccacactcttaccaaaaacgttaag 7598686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1524 - 1592
Target Start/End: Original strand, 31899102 - 31899170
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacc 1592  Q
    ||||||||| |||||||||| ||||| |||| ||||||||||||||| ||| |||||||||||||||||    
T  31899102 ggggaccgttcacatcgaggttagaagaaccccacaagcaagagagatacctcactcttacccaaaacc 31899170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 1531 - 1597
Target Start/End: Original strand, 14745300 - 14745367
Alignment:
Q  1531 gtccacatcgaggctagaacaaccac-acaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||| ||   |||||||||| |||||||||||||||||||||||||    
T  14745300 gtccacatcgaggctagaacaaccaccacttacaagagagacgccacactcttacccaaaaccttaag 14745367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1537 - 1597
Target Start/End: Original strand, 36784273 - 36784333
Alignment:
Q  1537 atcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||| ||| |||||||||||||    
T  36784273 atcgaggcttgaataaccacacaagcaagagagacacaacacttttatccaaaaccttaag 36784333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1543 - 1597
Target Start/End: Original strand, 28254258 - 28254310
Alignment:
Q  1543 gctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  28254258 gctagaacaaccccacaag--agagagacaccacactcttacccaaaaccttaag 28254310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1500 - 1597
Target Start/End: Complemental strand, 30313358 - 30313262
Alignment:
Q  1500 tgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||||||| | ||||||||  ||||| |||| | ||| |||| ||| ||||||||||||  |||||||| |||||||||||||||||| ||||||    
T  30313358 tgttgggtcacga-ggagagcccgggggatcgtcaaaatccaggccagagcaaccacacaagtgagagagacgccacactcttacccaaaatcttaag 30313262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1525 - 1597
Target Start/End: Complemental strand, 29677065 - 29676993
Alignment:
Q  1525 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||| |||||||||||| | |||||||| |||||  ||||||||||||||||||||||  ||| |||||||    
T  29677065 gggaccatccacatcgaggttggaacaaccccacaattaagagagacaccacactcttacttaaagccttaag 29676993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1498 - 1597
Target Start/End: Complemental strand, 16591067 - 16590968
Alignment:
Q  1498 attgttgggtcactaaggagagcctaggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||| | ||| ||||   || ||| |||||||| ||||||||||||||| |||||| ||||||||||  | | ||||||  |||||||||||    
T  16591067 attgttgggtcattgaggggagctcgggagactgtccacattgaggctagaacaaccccacaagtaagagagacattagattcttacttaaaaccttaag 16590968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1526 - 1597
Target Start/End: Original strand, 28531316 - 28531387
Alignment:
Q  1526 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||| ||||||||||||||||| ||||  || ||   |||||| |||||||||||||||||||| ||||||    
T  28531316 ggaccatccacatcgaggctagagcaactgcataactgagagagtcaccacactcttacccaaaatcttaag 28531387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 58; Significance: 1e-23; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Original strand, 514 - 587
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    ||||||| |||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||    
T  514 ggggaccttccacatcgaggctagaaaaaccactcaagcaagaaagacaccacactcttacccaaaaccttaag 587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1524 - 1585
Target Start/End: Original strand, 147 - 208
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacc 1585  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  147 ggggaccgtccacatcgaggctagaacaaccactcaagcaagagagacaccacattcttacc 208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 58; Significance: 1e-23; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1528 - 1597
Target Start/End: Original strand, 1110 - 1179
Alignment:
Q  1528 accgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||    
T  1110 accgtccacatcgaggctagaacaaccacataaacaagagagacaccatactcttacccaaaaccttaag 1179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1564 - 1597
Target Start/End: Original strand, 1731 - 1764
Alignment:
Q  1564 agagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||||| |||||||||||    
T  1731 agagagacaccacactcttaccaaaaaccttaag 1764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 50; Significance: 7e-19; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1533 - 1590
Target Start/End: Complemental strand, 5546 - 5489
Alignment:
Q  1533 ccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaa 1590  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  5546 ccacatcgaggcttgaacaaccccacaagcaagagagacaccacactcttacccaaaa 5489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1533 - 1590
Target Start/End: Complemental strand, 5931 - 5874
Alignment:
Q  1533 ccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaa 1590  Q
    ||||||||| | | |||||||| |||||| || ||||||||||||||||||| |||||    
T  5931 ccacatcgaagtttgaacaaccccacaagtaaaagagacaccacactcttactcaaaa 5874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 50; Significance: 7e-19; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1524 - 1597
Target Start/End: Complemental strand, 47518 - 47445
Alignment:
Q  1524 ggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||||| |||||||||| | |||||||||||||||||||| | ||||||||||| |||||    
T  47518 ggggaccgtccacatcgaggttagaacaaccgcgcaagcaagagagacaccacatttttacccaaaactttaag 47445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 47; Significance: 4e-17; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1531 - 1597
Target Start/End: Complemental strand, 5133 - 5067
Alignment:
Q  1531 gtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaag 1597  Q
    |||||||||||||||||| ||||| || |||| ||||||||||||||||||||||||||||| ||||    
T  5133 gtccacatcgaggctagagcaaccgcataagcgagagagacaccacactcttacccaaaaccataag 5067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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